F315813

General Info

Members Datasets Scaffolds Average Seq Length
206 171 412 681

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2852677369|2852678507
Length 797
Sequence SRRTFLPMLGHTKGKRSPVTCALKCANACTGEVCNTSSNAYFRDIVSAQLSRRAMLGASAGLAGAITLAFSAAPRAEAAPSASPFGPAASPLEFTPISPVDAMSDTFTVPDGYDWRALIRWGDPLFADSPIFDPADQTEAAQARQFGYNCDYTDILPLDGTDGLRAVLFVNHEYTNENIMFPAAQLENEQARVRAVSRAAHGLTVVELERTSAEHPWSYVVGAERNRRFLLNTVYEVTGPAAGSPLLTTVEDPAGRWVKGTLGNCAGGTTPWGTILSGEENFNGYFRSPGVSAEDKRYGLSDSETARGWELDAPRFDTRNAGYENEANRFGWIIEIDPLDPTSTPKKHSMLGRLKHEGANISIAANGRVVAYTGDDERFDYLYKFVSRDTYIEGNRAHNMTLLANGDLYVAQFAGNSPAAEITGSGALPSDAAFDGTGTWLPLVVGGASQIAGMSVDQVLVNTRLAADLAGATKMDRCEDVEPNPFTGKVYVACTNNTNRGTPGRAGVDETNPRAENRDGHVVEITEAGGDQTATSFTWNLLLLCGDPATNSSAYFAGFPAAQVSPISCPDNLAFDSVGNLWISTDGAPSTIGYNDGLFRVTLEGPERGNVEQFLAVPRESETCGPVIHDSERHVFVAVQHPGEDGSFEVQNSLFPDFVAAGTPAPAGSFAGPRPTIVQVLPKEQLIEVPVTPTPTVSPTATPAPTSTPPLTPTASPTGTPGATGTPTPSASAPGWATASPSATATPDGLASTGGELLAPTIGGAAVLAAGALATAAAIRRRGERPAQAGEGDSESE

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
28 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
29 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
44 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
45 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
49 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
50 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
54 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
62 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
63 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
64 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
65 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
66 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
67 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
68 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
72 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
73 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
74 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
79 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
80 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
93 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
94 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
95 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
96 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
97 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
98 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
99 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
100 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
101 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
102 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
103 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
104 2643221546 Microbacterium sp. Root53 Isolate Unclassified
105 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
106 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
107 2643221641 Nocardioides sp. Root122 Isolate Unclassified
108 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
109 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
110 2643221692 Nocardia sp. Root136 Isolate Unclassified
111 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
112 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
113 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
114 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
115 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
116 2739367898 Nocardioides sp. CF479 Isolate Unclassified
117 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
118 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
119 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
120 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
121 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
122 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
123 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
124 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
125 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
126 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
127 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
128 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
129 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
130 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
131 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
132 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
133 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
134 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
135 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
136 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
137 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
138 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
139 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
140 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
141 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
142 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
143 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
144 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
145 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
146 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
147 2919395869 Microbacterium resistens 2980 Isolate Unclassified
148 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
149 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
150 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
151 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
152 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
153 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
154 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
155 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
156 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
157 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
158 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
159 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
160 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
161 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
162 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
163 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
164 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
165 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
166 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
167 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
168 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
169 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
170 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
171 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 65.05
Metatranscriptomes 0
Isolates 34.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.11
Nodule 0.97
Rhizoplane 6.8
Rhizosphere 58.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1001324 3300002773 Bacteria 10970
2 rootL2_10000147 3300003322 Bacteria 25941
3 Ga0055540_1003719 3300003792 Bacteria 7215
4 Ga0055540_1004488 3300003792 Bacteria 6264
5 Ga0070676_10004836 3300005328 Bacteria 7127
6 Ga0068869_100024478 3300005334 Bacteria 4182
7 Ga0068869_100083919 3300005334 Bacteria 2383
8 Ga0070668_100003788 3300005347 Bacteria 11170
9 Ga0070675_100021150 3300005354 Bacteria 5196
10 Ga0070675_100069208 3300005354 Bacteria 2923
11 Ga0070671_100031426 3300005355 Bacteria 4385
12 Ga0070667_100030936 3300005367 Bacteria 4463
13 Ga0070710_10013107 3300005437 Bacteria 4139
14 Ga0070665_100025775 3300005548 Bacteria 5923
15 Ga0068863_100005152 3300005841 Bacteria 12896
16 Ga0081539_10013321 3300005985 Bacteria 6203
17 Ga0075365_10025966 3300006038 Bacteria 3713
18 Ga0075368_10003974 3300006042 Bacteria 4979
19 Ga0075363_100001148 3300006048 Bacteria 9691
20 Ga0075363_100001670 3300006048 Bacteria 8579
21 Ga0075363_100006833 3300006048 Bacteria 5216
22 Ga0075364_10003517 3300006051 Bacteria 8915
23 Ga0075364_10004922 3300006051 Bacteria 7739
24 Ga0075370_10015005 3300006353 Bacteria 4140
25 Ga0075428_100010808 3300006844 Bacteria 10146
26 Ga0105244_10006360 3300009036 Bacteria 7668
27 Ga0105246_10004861 3300011119 Bacteria 8188
28 Ga0157373_10023035 3300013100 Bacteria 4517
29 Ga0157369_10067251 3300013105 Bacteria 3853
30 Ga0157374_10057399 3300013296 Bacteria 3636
31 Ga0163163_10040740 3300014325 Bacteria 4538
32 Ga0209148_1004706 3300025254 Bacteria 3288
33 Ga0209129_1000060 3300025258 Bacteria 248262
34 Ga0209025_1000308 3300025294 Bacteria 108660
35 Ga0209051_1000554 3300025303 Bacteria 45489
36 Ga0209051_1001487 3300025303 Bacteria 19629
37 Ga0209051_1022251 3300025303 Bacteria 2673
38 Ga0207697_10028427 3300025315 Bacteria 2287
39 Ga0207682_10012465 3300025893 Bacteria 3317
40 Ga0207671_10010419 3300025914 Bacteria 7670
41 Ga0207644_10043248 3300025931 Bacteria 3196
42 Ga0207709_10046804 3300025935 Bacteria 2627
43 Ga0207691_10000569 3300025940 Bacteria 36992
44 Ga0207689_10032269 3300025942 Bacteria 4357
45 Ga0207668_10002322 3300025972 Bacteria 11103
46 Ga0207658_10032752 3300025986 Bacteria 3702
47 Ga0207639_10095368 3300026041 Bacteria 2391
48 Ga0207678_10006500 3300026067 Bacteria 10374
49 Ga0207641_10015765 3300026088 Bacteria 6191
50 Ga0207683_10008184 3300026121 Bacteria 8944
51 Ga0209813_10001954 3300027866 Bacteria 4662
52 Ga0207428_10006685 3300027907 Bacteria 10591
53 Ga0268266_10005382 3300028379 Bacteria 11954
54 Ga0268266_10048300 3300028379 Bacteria 3648
55 Ga0316181_1247783 3300030744 Bacteria 4149
56 Ga0307408_100009602 3300031548 Bacteria 6382
57 Ga0307408_100022709 3300031548 Bacteria 4266
58 Ga0307408_100038283 3300031548 Bacteria 3382
59 Ga0307408_100071504 3300031548 Bacteria 2565
60 Ga0307406_10021086 3300031901 Bacteria 3849
61 Ga0307407_10030418 3300031903 Bacteria 2912
62 Ga0307412_10062083 3300031911 Bacteria 2514
63 Ga0307409_100022281 3300031995 Bacteria 4364
64 Ga0307416_100022792 3300032002 Bacteria 4529
65 Ga0307416_100029416 3300032002 Bacteria 4104
66 Ga0307414_10038188 3300032004 Bacteria 3222
67 Ga0307411_10021707 3300032005 Bacteria 3763
68 Ga0307411_10025679 3300032005 Bacteria 3534
69 Ga0307415_100008789 3300032126 Bacteria 5622
70 Ga0373931_0014776 3300035691 Bacteria 3822
71 Ga0395900_0011001 3300037418 Bacteria 9252
72 Ga0395900_0029275 3300037418 Bacteria 5650
73 Ga0395900_0099680 3300037418 Bacteria 2984
74 Ga0395898_0002068 3300037466 Bacteria 24996
75 Ga0395898_0031369 3300037466 Bacteria 5310
76 Ga0395905_0019097 3300037471 Bacteria 6502
77 Ga0395905_0070294 3300037471 Bacteria 3280
78 Ga0395901_0001595 3300038443 Bacteria 23464
79 Ga0395901_0063553 3300038443 Bacteria 3842
80 Ga0395901_0078888 3300038443 Bacteria 3438
81 Ga0395901_0114152 3300038443 Bacteria 2837
82 Ga0439436_0003343 3300041404 Bacteria 4869
83 Ga0439466_0001481 3300041411 Bacteria 9167
84 Ga0439466_0002224 3300041411 Bacteria 7601
85 Ga0439466_0013475 3300041411 Bacteria 2992
86 Ga0439465_0005486 3300041413 Bacteria 4049
87 Ga0439465_0008813 3300041413 Bacteria 3178
88 Ga0439442_000306 3300042002 Bacteria 11838
89 Ga0439445_0000277 3300042004 Bacteria 9952
90 Ga0439432_014261 3300042006 Bacteria 2692
91 Ga0439449_0007303 3300042007 Bacteria 4200
92 Ga0439449_0018226 3300042007 Bacteria 2634
93 Ga0439434_0011575 3300042435 Bacteria 2610
94 Ga0466960_0002813 3300044901 Bacteria 6592
95 Ga0495638_0001483 3300046460 Bacteria 21203
96 Ga0495653_0034133 3300046463 Bacteria 4027
97 Ga0495580_0010604 3300046472 Bacteria 7170
98 Ga0495588_0017577 3300046674 Bacteria 3476
99 Ga0496101_0002516 3300048904 Bacteria 11254
100 Ga0496102_0030007 3300048905 Bacteria 4866
101 Ga0496103_0034655 3300048906 Bacteria 3088
102 Ga0496104_0057619 3300048907 Bacteria 3676
103 Ga0496108_0000123 3300048911 Bacteria 76931
104 Ga0496108_0003101 3300048911 Bacteria 13355
105 Ga0496109_0002348 3300048912 Bacteria 15783
106 Ga0496109_0062535 3300048912 Bacteria 3404
107 Ga0496109_0121984 3300048912 Bacteria 2428
108 Ga0496110_0003172 3300048913 Bacteria 12512
109 Ga0496112_0010182 3300048915 Bacteria 8520
110 Ga0496112_0030396 3300048915 Bacteria 5227
111 Ga0496113_0053933 3300048916 Bacteria 3007
112 Ga0496113_0077633 3300048916 Bacteria 2539
113 Ga0496126_0005681 3300048929 Bacteria 14152
114 Ga0496126_0006022 3300048929 Bacteria 13612
115 Ga0501032_0008101 3300049569 Bacteria 7661
116 Ga0501032_0015608 3300049569 Bacteria 5356
117 Ga0501034_0000042 3300049571 Bacteria 229124
118 Ga0501037_0003922 3300049573 Bacteria 10793
119 Ga0501037_0009151 3300049573 Bacteria 7255
120 Ga0501042_0019755 3300049578 Bacteria 4683
121 Ga0501043_0067465 3300049579 Bacteria 2809
122 Ga0501048_0025265 3300049582 Bacteria 4329
123 Ga0501070_0118761 3300049586 Bacteria 2185
124 Ga0501074_0077202 3300049590 Bacteria 2391
125 nmdc:mga03n38_1000_c1 3300050490 Bacteria 7731
126 nmdc:mga03n38_1543_c1 3300050490 Bacteria 6676
127 nmdc:mga00v17_7636_c1 3300050491 Bacteria 5784
128 nmdc:mga0yw44_11965_c1 3300050492 Bacteria 4504
129 nmdc:mga0yw44_18748_c1 3300050492 Bacteria 3798
130 nmdc:mga05p37_13257_c1 3300050507 Bacteria 9868
131 nmdc:mga0sz30_487_c1 3300050516 Bacteria 14812
132 Ga0500643_001039 3300053087 Bacteria 16875
133 Ga0500616_0018379 3300053153 Bacteria 3954
134 Ga0500645_000017 3300053730 Bacteria 146045
135 2852678507 2852677369 Bacteria 3768884
136 2515852215 2515154155 Bacteria 7985436
137 2537900783 2537561592 Bacteria 4348607
138 2586065635 2585427649 Bacteria 9053857
139 2643754299 2643221546 Bacteria 2910897
140 2643851295 2643221567 Bacteria 4163945
141 2644138166 2643221624 Bacteria 4384879
142 2644229923 2643221641 Bacteria 4490190
143 2644487954 2643221687 Bacteria 6500351
144 2644505193 2643221690 Bacteria 4654705
145 2644517981 2643221692 Bacteria 7282860
146 2644523713 2643221694 Bacteria 4392972
147 2644637943 2643221715 Bacteria 6671032
148 2644667816 2643221722 Bacteria 4247614
149 2691514990 2690315906 Bacteria 4517044
150 2738702964 2738541274 Bacteria 6909446
151 2740167874 2739367898 Bacteria 4367674
152 2753069445 2751185734 Bacteria 8863695
153 2774396139 2773857762 Bacteria 5971770
154 2775655402 2775506735 Bacteria 4556596
155 2808828095 2808606357 Bacteria 4466944
156 2808853452 2808606360 Bacteria 4404006
157 2808878052 2808606366 Bacteria 4415912
158 2808892335 2808606370 Bacteria 4942454
159 2808897441 2808606371 Bacteria 4251511
160 2809197777 2808606439 Bacteria 5952208
161 2812320149 2811994871 Bacteria 4497550
162 2812347732 2811994878 Bacteria 5992952
163 2842135793 2842134933 Bacteria 5847019
164 2844849971 2844849076 Bacteria 4091819
165 2848553999 2848551377 Bacteria 3720646
166 2857744170 2857740372 Bacteria 4782044
167 2866554747 2866552031 Bacteria 5824618
168 2870728078 2870721527 Bacteria 9689237
169 2891968858 2891968417 Bacteria 5821697
170 2902816503 2902810491 Bacteria 6794147
171 2902841091 2902837492 Bacteria 6697721
172 2904500155 2904497146 Bacteria 4731781
173 2904777054 2904776348 Bacteria 4658726
174 2905928178 2905926851 Bacteria 4423176
175 2906800093 2906799679 Bacteria 4031749
176 2910812599 2910809715 Bacteria 4982797
177 2915772111 2915768154 Bacteria 8424322
178 2919036584 2919034639 Bacteria 4763403
179 2919053556 2919051321 Bacteria 4210889
180 2919059409 2919059106 Bacteria 4991624
181 2919393015 2919391150 Bacteria 4884741
182 2919396063 2919395869 Bacteria 3704152
183 2919541051 2919538618 Bacteria 4677069
184 2929219044 2929212328 Bacteria 7708288
185 2932427188 2932426870 Bacteria 4547726
186 2933419812 2933418574 Bacteria 4476724
187 2939599058 2939598168 Bacteria 4687164
188 2939651175 2939647034 Bacteria 4681660
189 2939676973 2939674588 Bacteria 4844420
190 2945917878 2945916053 Bacteria 4555517
191 2945921815 2945920336 Bacteria 4501603
192 2945941968 2945941187 Bacteria 4682474
193 2945960257 2945956166 Bacteria 5110334
194 2946005758 2946003308 Bacteria 3857229
195 2946026885 2946024296 Bacteria 3508095
196 2946061732 2946059875 Bacteria 4386623
197 2953999221 2953998280 Bacteria 4812144
198 2964326949 2964326757 Bacteria 3290868
199 2966924533 2966921586 Bacteria 3092803
200 2974305930 2974302888 Bacteria 4369871
201 8003830427 8003830390 Bacteria 6541657
202 8003871942 8003870546 Bacteria 7396674
203 8046353957 8046352972 Bacteria 3613806
204 8047719149 8047710418 Bacteria 11023148
205 8054110787 8054107350 Bacteria 5022511
206 8054610710 8054609563 Bacteria 5170090
207 JGI25152J39213_1001324
208 rootL2_10000147
209 Ga0055540_1003719
210 Ga0055540_1004488
211 Ga0070676_10004836
212 Ga0068869_100024478
213 Ga0068869_100083919
214 Ga0070668_100003788
215 Ga0070675_100021150
216 Ga0070675_100069208
217 Ga0070671_100031426
218 Ga0070667_100030936
219 Ga0070710_10013107
220 Ga0070665_100025775
221 Ga0068863_100005152
222 Ga0081539_10013321
223 Ga0075365_10025966
224 Ga0075368_10003974
225 Ga0075363_100001148
226 Ga0075363_100001670
227 Ga0075363_100006833
228 Ga0075364_10003517
229 Ga0075364_10004922
230 Ga0075370_10015005
231 Ga0075428_100010808
232 Ga0105244_10006360
233 Ga0105246_10004861
234 Ga0157373_10023035
235 Ga0157369_10067251
236 Ga0157374_10057399
237 Ga0163163_10040740
238 Ga0209148_1004706
239 Ga0209129_1000060
240 Ga0209025_1000308
241 Ga0209051_1000554
242 Ga0209051_1001487
243 Ga0209051_1022251
244 Ga0207697_10028427
245 Ga0207682_10012465
246 Ga0207671_10010419
247 Ga0207644_10043248
248 Ga0207709_10046804
249 Ga0207691_10000569
250 Ga0207689_10032269
251 Ga0207668_10002322
252 Ga0207658_10032752
253 Ga0207639_10095368
254 Ga0207678_10006500
255 Ga0207641_10015765
256 Ga0207683_10008184
257 Ga0209813_10001954
258 Ga0207428_10006685
259 Ga0268266_10005382
260 Ga0268266_10048300
261 Ga0316181_1247783
262 Ga0307408_100009602
263 Ga0307408_100022709
264 Ga0307408_100038283
265 Ga0307408_100071504
266 Ga0307406_10021086
267 Ga0307407_10030418
268 Ga0307412_10062083
269 Ga0307409_100022281
270 Ga0307416_100022792
271 Ga0307416_100029416
272 Ga0307414_10038188
273 Ga0307411_10021707
274 Ga0307411_10025679
275 Ga0307415_100008789
276 Ga0373931_0014776
277 Ga0395900_0011001
278 Ga0395900_0029275
279 Ga0395900_0099680
280 Ga0395898_0002068
281 Ga0395898_0031369
282 Ga0395905_0019097
283 Ga0395905_0070294
284 Ga0395901_0001595
285 Ga0395901_0063553
286 Ga0395901_0078888
287 Ga0395901_0114152
288 Ga0439436_0003343
289 Ga0439466_0001481
290 Ga0439466_0002224
291 Ga0439466_0013475
292 Ga0439465_0005486
293 Ga0439465_0008813
294 Ga0439442_000306
295 Ga0439445_0000277
296 Ga0439432_014261
297 Ga0439449_0007303
298 Ga0439449_0018226
299 Ga0439434_0011575
300 Ga0466960_0002813
301 Ga0495638_0001483
302 Ga0495653_0034133
303 Ga0495580_0010604
304 Ga0495588_0017577
305 Ga0496101_0002516
306 Ga0496102_0030007
307 Ga0496103_0034655
308 Ga0496104_0057619
309 Ga0496108_0000123
310 Ga0496108_0003101
311 Ga0496109_0002348
312 Ga0496109_0062535
313 Ga0496109_0121984
314 Ga0496110_0003172
315 Ga0496112_0010182
316 Ga0496112_0030396
317 Ga0496113_0053933
318 Ga0496113_0077633
319 Ga0496126_0005681
320 Ga0496126_0006022
321 Ga0501032_0008101
322 Ga0501032_0015608
323 Ga0501034_0000042
324 Ga0501037_0003922
325 Ga0501037_0009151
326 Ga0501042_0019755
327 Ga0501043_0067465
328 Ga0501048_0025265
329 Ga0501070_0118761
330 Ga0501074_0077202
331 nmdc:mga03n38_1000_c1
332 nmdc:mga03n38_1543_c1
333 nmdc:mga00v17_7636_c1
334 nmdc:mga0yw44_11965_c1
335 nmdc:mga0yw44_18748_c1
336 nmdc:mga05p37_13257_c1
337 nmdc:mga0sz30_487_c1
338 Ga0500643_001039
339 Ga0500616_0018379
340 Ga0500645_000017
341 2852678507
342 2515852215
343 2537900783
344 2586065635
345 2643754299
346 2643851295
347 2644138166
348 2644229923
349 2644487954
350 2644505193
351 2644517981
352 2644523713
353 2644637943
354 2644667816
355 2691514990
356 2738702964
357 2740167874
358 2753069445
359 2774396139
360 2775655402
361 2808828095
362 2808853452
363 2808878052
364 2808892335
365 2808897441
366 2809197777
367 2812320149
368 2812347732
369 2842135793
370 2844849971
371 2848553999
372 2857744170
373 2866554747
374 2870728078
375 2891968858
376 2902816503
377 2902841091
378 2904500155
379 2904777054
380 2905928178
381 2906800093
382 2910812599
383 2915772111
384 2919036584
385 2919053556
386 2919059409
387 2919393015
388 2919396063
389 2919541051
390 2929219044
391 2932427188
392 2933419812
393 2939599058
394 2939651175
395 2939676973
396 2945917878
397 2945921815
398 2945941968
399 2945960257
400 2946005758
401 2946026885
402 2946061732
403 2953999221
404 2964326949
405 2966924533
406 2974305930
407 8003830427
408 8003871942
409 8046353957
410 8047719149
411 8054110787
412 8054610710

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05787

PhoX

Alkaline phosphatase PhoX

92

643

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zwu-assembly1.cif.gz_A pseudomonas fluorescens phox in complex with vanadate, a transition state analogue 0.8888 65 655
3zwu-assembly1.cif.gz_A pseudomonas fluorescens phox in complex with vanadate, a transition state analogue 0.8695 65 655
7ris-assembly1.cif.gz_A crystal structure of rpa3624, a beta-propeller lactonase from rhodopseudomonas palustris, with active-site bound phosphate 0.6391 326 611
3no2-assembly1.cif.gz_A crystal structure of a protein of unknown function (baccac_01654) from bacteroides caccae at 1.35 a resolution 0.6168 227 610
8dk0-assembly1.cif.gz_A crystal structure of rpa3624, a beta-propeller lactonase from rhodopseudomonas palustris, with active-site bound (s)gamma-valerolactone 0.6125 326 611
ID Description Score Start End Superfamily
af_A0A0R0HB99_96_400_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7605 546 612 2.130.10.10
af_E7F381_95_271_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6811 450 614 2.130.10.10
af_A0A1D6K2N8_1_234_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.6742 445 611 2.120.10.30
af_Q5FVN8_97_224_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.6722 546 612 2.40.128.630
af_Q4CX86_16_200_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 546 612 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A3D0ZMR0-F1-model_v4 Phosphatase 0.9977 332 521
AF-A0A353ZXW1-F1-model_v4 Phosphatase 0.9955 196 306
AF-A0A353ZXW2-F1-model_v4 Phosphatase 0.9953 332 656
AF-A0A3C2BSV8-F1-model_v4 Phosphatase 0.9944 228 656
AF-A0A3D0VH65-F1-model_v4 Phosphatase 0.9937 228 306

Map