F315794

General Info

Members Datasets Scaffolds Average Seq Length
206 153 162 1091

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221694|2644526718
Length 1199
Sequence ADRGAAFPPRYAELHAHSAFSFLDGASQPEELAAEASRLGLRALGLTDHDGLYGVVRFAQAAKAVGLPTVFGAELHLPAPDGRRHPREAARVTPGPPVLDLPTGIPDPRASHLLVLARGPDGYRALSRAIAEAHLRTGRKGAADYRLEELAATAAGQWLVLTGCRKGSVRRALAGGDPSGVTGVTAAGIEAARTELDRLVALFGRDNVAVEVTAMGDPYDADRADALAHLAADAGLPLVATGNVHYATPRDADLAAALAAVRARSSLEDLDGWLPGGPMAHLRSATEMLALHRRHPSAVVTAADLADECAFDLSLVAPQLPPYPVPPGHTEATWLRELVRRGALELYGPPESERVPGAYAQLAHELTVIEDLGFPGYFLVVYDLVDFCRRNGILAQGRGSAANSAVCYALRVTAVDAVRHGLLFERFLAPERDGPPDIDVDIESARREEVIQYVYEKHGRSHAAQVANVISYRPRSAVRDAARALGYDAGQQDAWASSIERWGSLRSPAPTPSPEKPSAGPSRRQERPHVGHTGPAPETPASVTTARDERRRTQASMWGNTWEPPSVLRSAKGVDTPGLATADGHDVVPAVLPPSASDLDEIPEHVIDLADRFLRLPRHLGIHSGGMVMCDRPVIEVCPVEWARMPGRTVLQWDKEDCADAGLVKFDLLGLGMLTALRIGFTSVREHEGEELDLHGLPAEDPRVYDLLSAADTVGVFQVESRAQMGTLPRLQPRTFYDIVIEVALIRPGPIQGGSVHPYIERAHGRQPVTYLHPLLEKSLAKTKGVPLFQEQLMQMAIDVADFTPAEADQLRRAMGSKRSTERMEAMRGRLMSGMAGHGIDEQTGTEIFDKLKAFADFGFPESHAYSFAFLVYASAWLKVYHPAAFYAGLLAAQPMGFYSPQSLAADARRHGLEVLRPDVQASDVQACVERLGPTPTGGEPRLVPTPSGTGPVTAPGVRTGDGDRSLAVRLGLASVRSVGEDVAQRVVDERRAHGPFADLRQLVRRVQLSTAQLEALATAGALDSLGVTRREALWAAGALAQEGPDTLPGVSVGVSAPMLPGLSDVEIATADVWATGVSVDSYPTQFVRDGLDAAGVLRVEQAYTHEIGRRVAVAGVVTHRQRPGTAGGTTFLSLEDETGLLNVICSAGLWQKFRKVARTSRALVVRGRLERADGATNLVAEHLAPMSLKVRSASRDFR

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
3 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
4 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
5 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
6 2582580736 Prauserella sp. Am3 Isolate Unclassified
7 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
8 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
9 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
10 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
11 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
12 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
13 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
14 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
15 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
16 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
17 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
18 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
19 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
20 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
21 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
22 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
23 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
24 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
25 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
26 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
27 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
28 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
29 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
30 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
31 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
32 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
33 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
34 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
35 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
36 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
37 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
38 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
39 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
40 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
41 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
42 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
43 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
44 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
45 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
46 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
47 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
48 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
49 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
50 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
83 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
84 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
87 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
93 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
94 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
112 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
140 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
150 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
151 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
152 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
153 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.64
Metatranscriptomes 0
Isolates 21.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.43
Nodule 0
Rhizoplane 9.22
Rhizosphere 60.68
Stem 0
Stem Tuber 0
Unclassified 27.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1001869 3300002738 Bacteria 6413
2 Ga0055540_1001102 3300003792 Bacteria 17060
3 Ga0070683_100002409 3300005329 Bacteria 14856
4 Ga0068869_100020465 3300005334 Bacteria 4536
5 Ga0070675_100000270 3300005354 Bacteria 34199
6 Ga0070714_100000476 3300005435 Bacteria 29024
7 Ga0070713_100031782 3300005436 Bacteria 4208
8 Ga0070700_100001169 3300005441 Bacteria 12986
9 Ga0070662_100013767 3300005457 Bacteria 5388
10 Ga0070664_100001407 3300005564 Bacteria 19217
11 Ga0068857_100002633 3300005577 Bacteria 14733
12 Ga0068863_100010154 3300005841 Bacteria 9156
13 Ga0081539_10000253 3300005985 Bacteria 124747
14 Ga0075428_100007150 3300006844 Bacteria 12367
15 Ga0075428_100011678 3300006844 Bacteria 9775
16 Ga0075430_100000711 3300006846 Bacteria 25412
17 Ga0075430_100001883 3300006846 Bacteria 17177
18 Ga0075430_100006649 3300006846 Bacteria 9748
19 Ga0075431_100017526 3300006847 Bacteria 7280
20 Ga0075429_100006651 3300006880 Bacteria 10019
21 Ga0111539_10002261 3300009094 Bacteria 25668
22 Ga0111539_10019540 3300009094 Bacteria 8357
23 Ga0114129_10001806 3300009147 Bacteria 29163
24 Ga0114129_10007314 3300009147 Bacteria 15718
25 Ga0105239_10003782 3300010375 Bacteria 18420
26 Ga0209646_1000248 3300025246 Bacteria 54666
27 Ga0209051_1001777 3300025303 Bacteria 17112
28 Ga0207671_10015776 3300025914 Bacteria 5898
29 Ga0207659_10001393 3300025926 Bacteria 14405
30 Ga0207664_10000207 3300025929 Bacteria 44525
31 Ga0207644_10002233 3300025931 Bacteria 12561
32 Ga0207706_10032940 3300025933 Bacteria 4611
33 Ga0207689_10004062 3300025942 Bacteria 13297
34 Ga0207679_10005055 3300025945 Bacteria 8246
35 Ga0207668_10007391 3300025972 Bacteria 6531
36 Ga0207677_10001058 3300026023 Bacteria 15087
37 Ga0207678_10000194 3300026067 Bacteria 52678
38 Ga0207708_10002616 3300026075 Bacteria 13244
39 Ga0207641_10007047 3300026088 Bacteria 9394
40 Ga0207674_10004493 3300026116 Bacteria 16764
41 Ga0207674_10053633 3300026116 Bacteria 4109
42 Ga0207675_100012184 3300026118 Bacteria 8031
43 Ga0207675_100047590 3300026118 Bacteria 4003
44 Ga0207428_10001641 3300027907 Bacteria 23266
45 Ga0307515_10024262 3300028794 Bacteria 10576
46 Ga0265338_10011519 3300028800 Bacteria 10199
47 Ga0265325_10006075 3300031241 Bacteria 7390
48 Ga0265339_10007861 3300031249 Bacteria 6843
49 Ga0265327_10006069 3300031251 Bacteria 9799
50 Ga0265327_10007077 3300031251 Bacteria 8775
51 Ga0265313_10005005 3300031595 Bacteria 9905
52 Ga0307518_10000445 3300031838 Bacteria 31568
53 Ga0400483_048237 3300039062 Bacteria 11982
54 Ga0400483_229239 3300039062 Bacteria 19584
55 Ga0436365_0941394 3300039437 Bacteria 4107
56 Ga0466965_0001664 3300044683 Bacteria 9118
57 Ga0466966_0004728 3300044684 Bacteria 8959
58 Ga0466963_0038717 3300044694 Bacteria 3120
59 Ga0466959_0007515 3300045049 Bacteria 7653
60 Ga0466958_0017116 3300045836 Bacteria 4185
61 Ga0466967_0035237 3300045976 Bacteria 4258
62 Ga0495618_0041295 3300046514 Bacteria 2905
63 Ga0495628_0009012 3300046516 Bacteria 8539
64 Ga0495666_0010685 3300046526 Bacteria 4578
65 Ga0495587_0005514 3300046536 Bacteria 8256
66 Ga0495674_0024509 3300047319 Bacteria 5542
67 Ga0495684_0000522 3300047471 Bacteria 31216
68 Ga0496100_0000225 3300048903 Bacteria 30548
69 Ga0496101_0000118 3300048904 Bacteria 77684
70 Ga0496101_0012310 3300048904 Bacteria 5705
71 Ga0496101_0016108 3300048904 Bacteria 5047
72 Ga0496102_0000127 3300048905 Bacteria 104838
73 Ga0496103_0000664 3300048906 Bacteria 25919
74 Ga0496103_0002879 3300048906 Bacteria 10677
75 Ga0496104_0016190 3300048907 Bacteria 6769
76 Ga0496104_0022015 3300048907 Bacteria 5856
77 Ga0496105_0013694 3300048908 Bacteria 6440
78 Ga0496107_0000106 3300048910 Bacteria 40710
79 Ga0496109_0000077 3300048912 Bacteria 103492
80 Ga0496109_0006123 3300048912 Bacteria 10108
81 Ga0496110_0000645 3300048913 Bacteria 23879
82 Ga0496111_0000485 3300048914 Bacteria 20417
83 Ga0496112_0001806 3300048915 Bacteria 16851
84 Ga0496112_0017604 3300048915 Bacteria 6719
85 Ga0496114_0000880 3300048917 Bacteria 22492
86 Ga0496115_0005853 3300048918 Bacteria 8961
87 Ga0496116_0000228 3300048919 Bacteria 104766
88 Ga0496116_0005986 3300048919 Bacteria 11154
89 Ga0496117_0000204 3300048920 Bacteria 116843
90 Ga0496117_0000727 3300048920 Bacteria 51713
91 Ga0496117_0007579 3300048920 Bacteria 10559
92 Ga0496117_0007608 3300048920 Bacteria 10525
93 Ga0496118_0000202 3300048921 Bacteria 104816
94 Ga0496118_0000604 3300048921 Bacteria 59356
95 Ga0496118_0005885 3300048921 Bacteria 13737
96 Ga0496119_0002123 3300048922 Bacteria 22312
97 Ga0496121_0000002 3300048924 Bacteria 1494588
98 Ga0496121_0000040 3300048924 Bacteria 348494
99 Ga0496121_0009831 3300048924 Bacteria 10920
100 Ga0496122_0000051 3300048925 Bacteria 265104
101 Ga0496122_0000387 3300048925 Bacteria 93665
102 Ga0496122_0001821 3300048925 Bacteria 32544
103 Ga0496123_0000219 3300048926 Bacteria 116445
104 Ga0496124_0000002 3300048927 Bacteria 1494588
105 Ga0496124_0000915 3300048927 Bacteria 47671
106 Ga0496124_0014713 3300048927 Bacteria 7552
107 Ga0496125_0000002 3300048928 Bacteria 1480920
108 Ga0496125_0000316 3300048928 Bacteria 94359
109 Ga0496125_0004010 3300048928 Bacteria 17305
110 Ga0496125_0013947 3300048928 Bacteria 7859
111 Ga0496126_0000011 3300048929 Bacteria 744275
112 Ga0496126_0002333 3300048929 Bacteria 26010
113 Ga0496126_0006574 3300048929 Bacteria 12950
114 Ga0496126_0008137 3300048929 Bacteria 11352
115 Ga0496126_0051228 3300048929 Bacteria 3759
116 Ga0501032_0003593 3300049569 Bacteria 11805
117 Ga0501032_0012240 3300049569 Bacteria 6140
118 Ga0501033_0011979 3300049570 Bacteria 6624
119 Ga0501034_0009238 3300049571 Bacteria 10335
120 Ga0501034_0019956 3300049571 Bacteria 6844
121 Ga0501036_0006062 3300049572 Bacteria 9806
122 Ga0501037_0019037 3300049573 Bacteria 5061
123 Ga0501038_0000331 3300049574 Bacteria 40842
124 Ga0501038_0011214 3300049574 Bacteria 8183
125 Ga0501038_0015343 3300049574 Bacteria 6965
126 Ga0501040_0001179 3300049576 Bacteria 16631
127 Ga0501041_0016675 3300049577 Bacteria 4371
128 Ga0501043_0001294 3300049579 Bacteria 21948
129 Ga0501046_0000196 3300049580 Bacteria 62286
130 Ga0501046_0003092 3300049580 Bacteria 15369
131 Ga0501046_0008034 3300049580 Bacteria 9221
132 Ga0501047_0000031 3300049581 Bacteria 215903
133 Ga0501048_0009636 3300049582 Bacteria 7247
134 Ga0501048_0018400 3300049582 Bacteria 5139
135 Ga0501070_0011487 3300049586 Bacteria 7480
136 Ga0501074_0015224 3300049590 Bacteria 5590
137 Ga0501074_0033604 3300049590 Bacteria 3717
138 Ga0501076_0000669 3300049592 Bacteria 21966
139 Ga0501076_0016009 3300049592 Bacteria 5677
140 Ga0501077_0003765 3300049593 Bacteria 9127
141 Ga0501035_0001307 3300049822 Bacteria 25758
142 Ga0501035_0017641 3300049822 Bacteria 6584
143 Ga0501044_0012078 3300049823 Bacteria 9355
144 Ga0501045_0001323 3300049824 Bacteria 16434
145 Ga0501045_0007476 3300049824 Bacteria 7586
146 nmdc:mga0yw44_14915_c1 3300050492 Bacteria 4144
147 nmdc:mga05p37_240_c1 3300050507 Bacteria 56075
148 nmdc:mga05p37_2904_c1 3300050507 Bacteria 19888
149 nmdc:mga09592_14_c1 3300050508 Bacteria 66825
150 nmdc:mga09592_23195_c1 3300050508 Bacteria 5124
151 nmdc:mga0qj67_510_c1 3300050509 Bacteria 26591
152 nmdc:mga0qj67_54_c4 3300050509 Bacteria 15718
153 nmdc:mga06r32_113_c1 3300050510 Bacteria 57959
154 nmdc:mga06r32_18_c3 3300050510 Bacteria 53938
155 nmdc:mga08y16_14586_c1 3300050511 Bacteria 8265
156 nmdc:mga08y16_3147_c1 3300050511 Bacteria 17089
157 Ga0500616_0004798 3300053153 Bacteria 9467
158 Ga0500616_0006100 3300053153 Bacteria 7977
159 Ga0501084_0000148 3300054114 Bacteria 53108
160 Ga0501084_0000855 3300054114 Bacteria 23537
161 Ga0501084_0018860 3300054114 Bacteria 5744
162 Ga0501082_0021500 3300060353 Bacteria 5564

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049590 Ga0501074_0015224 Ga0501074_0015224_2823_5543 859
2 3300049582 Ga0501048_0009636 Ga0501048_0009636_3926_6763 874
3 3300050508 nmdc:mga09592_23195_c1 nmdc:mga09592_23195_c1_169_2946 887
4 3300044694 Ga0466963_0038717 Ga0466963_0038717_238_3090 896
5 3300046514 Ga0495618_0041295 Ga0495618_0041295_16_2880 907
6 3300026118 Ga0207675_100047590 Ga0207675_1000475903 918
7 3300009147 Ga0114129_10001806 Ga0114129_1000180629 924
8 3300050510 nmdc:mga06r32_113_c1 nmdc:mga06r32_113_c1_1224_4076 927
9 3300046526 Ga0495666_0010685 Ga0495666_0010685_1613_4561 935
10 3300049823 Ga0501044_0012078 Ga0501044_0012078_77_3178 974
11 3300005435 Ga0070714_100000476 Ga0070714_10000047615 978
12 3300025929 Ga0207664_10000207 Ga0207664_1000020714 978
13 3300049592 Ga0501076_0000669 Ga0501076_0000669_8181_11528 979
14 3300049574 Ga0501038_0015343 Ga0501038_0015343_2505_5852 980
15 3300049576 Ga0501040_0001179 Ga0501040_0001179_1031_4378 980
16 3300049580 Ga0501046_0003092 Ga0501046_0003092_6370_9717 980
17 3300049593 Ga0501077_0003765 Ga0501077_0003765_4842_8189 980
18 3300049824 Ga0501045_0001323 Ga0501045_0001323_877_4224 980
19 3300048904 Ga0496101_0016108 Ga0496101_0016108_951_4250 987
20 3300048907 Ga0496104_0016190 Ga0496104_0016190_1311_4610 987
21 3300048918 Ga0496115_0005853 Ga0496115_0005853_4806_8105 987
22 3300044684 Ga0466966_0004728 Ga0466966_0004728_4813_7866 989
23 3300006844 Ga0075428_100011678 Ga0075428_1000116789 995
24 3300006846 Ga0075430_100000711 Ga0075430_10000071122 995
25 3300009094 Ga0111539_10002261 Ga0111539_1000226121 995
26 3300027907 Ga0207428_10001641 Ga0207428_1000164120 995
27 3300050507 nmdc:mga05p37_2904_c1 nmdc:mga05p37_2904_c1_13910_17071 995
28 3300050511 nmdc:mga08y16_3147_c1 nmdc:mga08y16_3147_c1_4715_7876 995
29 3300049572 Ga0501036_0006062 Ga0501036_0006062_17_3280 997
30 3300049590 Ga0501074_0033604 Ga0501074_0033604_328_3591 997
31 3300054114 Ga0501084_0000855 Ga0501084_0000855_9245_12508 997
32 3300048917 Ga0496114_0000880 Ga0496114_0000880_11301_14564 998
33 3300049569 Ga0501032_0003593 Ga0501032_0003593_534_4112 999
34 3300049822 Ga0501035_0017641 Ga0501035_0017641_809_4387 999
35 3300049822 Ga0501035_0001307 Ga0501035_0001307_4006_7290 1001
36 3300005457 Ga0070662_100013767 Ga0070662_1000137673 1005
37 3300025933 Ga0207706_10032940 Ga0207706_100329402 1005
38 3300026118 Ga0207675_100012184 Ga0207675_1000121846 1005
39 3300049571 Ga0501034_0019956 Ga0501034_0019956_3146_6394 1005
40 3300049586 Ga0501070_0011487 Ga0501070_0011487_2245_5493 1005
41 3300049824 Ga0501045_0007476 Ga0501045_0007476_535_3786 1005
42 3300039062 Ga0400483_048237 Ga0400483_048237_1790_4954 1006
43 3300039062 Ga0400483_229239 Ga0400483_229239_10004_13168 1006
44 3300045049 Ga0466959_0007515 Ga0466959_0007515_818_4066 1007
45 3300045836 Ga0466958_0017116 Ga0466958_0017116_650_3895 1008
46 3300049580 Ga0501046_0008034 Ga0501046_0008034_1681_5265 1008
47 3300005436 Ga0070713_100031782 Ga0070713_1000317822 1009
48 3300010375 Ga0105239_10003782 Ga0105239_1000378214 1010
49 3300049574 Ga0501038_0000331 Ga0501038_0000331_21636_25220 1012
50 3300048929 Ga0496126_0008137 Ga0496126_0008137_1016_4276 1017
51 3300053153 Ga0500616_0006100 Ga0500616_0006100_2421_5627 1017
52 3300048921 Ga0496118_0000604 Ga0496118_0000604_15329_18598 1018
53 3300060353 Ga0501082_0021500 Ga0501082_0021500_744_4328 1020
54 iso_pu_bacteria 2861520306 2861520887 1021
55 3300048903 Ga0496100_0000225 Ga0496100_0000225_16670_19933 1024
56 3300048904 Ga0496101_0000118 Ga0496101_0000118_23848_27111 1024
57 3300048906 Ga0496103_0002879 Ga0496103_0002879_3850_7113 1024
58 3300048910 Ga0496107_0000106 Ga0496107_0000106_13614_16877 1024
59 3300048912 Ga0496109_0000077 Ga0496109_0000077_89063_92326 1024
60 3300048913 Ga0496110_0000645 Ga0496110_0000645_15285_18548 1024
61 3300048914 Ga0496111_0000485 Ga0496111_0000485_13455_16718 1024
62 3300048919 Ga0496116_0005986 Ga0496116_0005986_3196_6459 1024
63 3300048920 Ga0496117_0007608 Ga0496117_0007608_4067_7330 1024
64 3300048921 Ga0496118_0005885 Ga0496118_0005885_4307_7570 1024
65 3300048922 Ga0496119_0002123 Ga0496119_0002123_1085_4348 1024
66 3300048924 Ga0496121_0000002 Ga0496121_0000002_1120186_1123449 1024
67 3300048925 Ga0496122_0000051 Ga0496122_0000051_235764_239027 1024
68 3300048927 Ga0496124_0000002 Ga0496124_0000002_371140_374403 1024
69 3300048928 Ga0496125_0000002 Ga0496125_0000002_1120186_1123449 1024
70 3300048929 Ga0496126_0000011 Ga0496126_0000011_371140_374403 1024
71 3300028794 Ga0307515_10024262 Ga0307515_100242628 1025
72 3300025914 Ga0207671_10015776 Ga0207671_100157763 1029
73 3300048912 Ga0496109_0006123 Ga0496109_0006123_1863_5201 1029
74 3300048915 Ga0496112_0001806 Ga0496112_0001806_8770_12108 1029
75 3300048915 Ga0496112_0017604 Ga0496112_0017604_1035_4418 1029
76 3300031251 Ga0265327_10006069 Ga0265327_100060696 1030
77 3300028800 Ga0265338_10011519 Ga0265338_100115194 1032
78 3300031241 Ga0265325_10006075 Ga0265325_100060753 1032
79 3300031249 Ga0265339_10007861 Ga0265339_100078613 1032
80 3300031595 Ga0265313_10005005 Ga0265313_100050053 1032
81 3300039437 Ga0436365_0941394 Ga0436365_0941394_536_3961 1032
82 3300054114 Ga0501084_0000148 Ga0501084_0000148_48918_52178 1032
83 3300003792 Ga0055540_1001102 Ga0055540_10011021 1034
84 3300025303 Ga0209051_1001777 Ga0209051_100177714 1034
85 3300005841 Ga0068863_100010154 Ga0068863_1000101546 1036
86 3300026088 Ga0207641_10007047 Ga0207641_100070474 1036
87 3300048905 Ga0496102_0000127 Ga0496102_0000127_2619_6086 1036
88 3300048906 Ga0496103_0000664 Ga0496103_0000664_19839_23306 1036
89 3300048919 Ga0496116_0000228 Ga0496116_0000228_98683_102150 1036
90 3300048920 Ga0496117_0000204 Ga0496117_0000204_98751_102218 1036
91 3300048921 Ga0496118_0000202 Ga0496118_0000202_2615_6082 1036
92 3300048927 Ga0496124_0014713 Ga0496124_0014713_3758_7192 1036
93 3300048928 Ga0496125_0013947 Ga0496125_0013947_796_4230 1036
94 3300048929 Ga0496126_0002333 Ga0496126_0002333_2636_6103 1036
95 3300046516 Ga0495628_0009012 Ga0495628_0009012_1493_4843 1039
96 3300047319 Ga0495674_0024509 Ga0495674_0024509_654_4004 1039
97 3300026116 Ga0207674_10053633 Ga0207674_100536332 1040
98 3300048907 Ga0496104_0022015 Ga0496104_0022015_576_4103 1040
99 3300048908 Ga0496105_0013694 Ga0496105_0013694_1274_4801 1040
100 iso_pu_bacteria 2839986021 2839986803 1040
101 3300031251 Ga0265327_10007077 Ga0265327_100070776 1042
102 3300046536 Ga0495587_0005514 Ga0495587_0005514_4047_7568 1043
103 3300047471 Ga0495684_0000522 Ga0495684_0000522_6707_10228 1043
104 3300049577 Ga0501041_0016675 Ga0501041_0016675_104_3532 1043
105 3300048925 Ga0496122_0001821 Ga0496122_0001821_12600_16079 1044
106 iso_pu_bacteria 2811994880 2812364976 1046
107 3300049574 Ga0501038_0011214 Ga0501038_0011214_3224_7108 1049
108 iso_pu_bacteria 2643221690 2644504207 1050
109 iso_pu_bacteria 8053945823 8053950886 1052
110 3300025931 Ga0207644_10002233 Ga0207644_100022333 1053
111 iso_pu_bacteria 2643221694 2644526718 1053
112 iso_pu_bacteria 2643221722 2644670540 1053
113 iso_pu_bacteria 2738541264 2738664527 1054
114 iso_pu_bacteria 2738541356 2739143662 1054
115 iso_pu_bacteria 2904765812 2904766057 1055
116 iso_pu_bacteria 2904770941 2904773451 1055
117 iso_pu_bacteria 2908811453 2908812179 1055
118 iso_pu_bacteria 2919420072 2919421516 1055
119 iso_pu_bacteria 2919432681 2919432726 1055
120 3300044683 Ga0466965_0001664 Ga0466965_0001664_3848_7213 1056
121 3300049570 Ga0501033_0011979 Ga0501033_0011979_1998_5435 1058
122 iso_pu_bacteria 2738543005 2739202903 1059
123 3300031838 Ga0307518_10000445 Ga0307518_1000044519 1060
124 3300049580 Ga0501046_0000196 Ga0501046_0000196_52162_55611 1061
125 iso_pu_bacteria 2863067949 2863070415 1061
126 iso_pu_bacteria 2889300758 2889305895 1061
127 3300049582 Ga0501048_0018400 Ga0501048_0018400_1472_4966 1063
128 3300050492 nmdc:mga0yw44_14915_c1 nmdc:mga0yw44_14915_c1_74_3385 1063
129 iso_pu_bacteria 2928142448 2928142877 1064
130 iso_pu_bacteria 2585427649 2586064409 1065
131 iso_pu_bacteria 2643221687 2644489932 1065
132 iso_pu_bacteria 2738543011 2739236415 1065
133 iso_pu_bacteria 2808606522 2809586361 1065
134 iso_pu_bacteria 2899359706 2899364493 1065
135 iso_pu_bacteria 2915768154 2915770051 1065
136 iso_pu_bacteria 2917736166 2917737715 1065
137 iso_pu_bacteria 2939743619 2939744031 1065
138 3300048928 Ga0496125_0000316 Ga0496125_0000316_36971_40522 1067
139 3300049592 Ga0501076_0016009 Ga0501076_0016009_219_3749 1067
140 3300054114 Ga0501084_0018860 Ga0501084_0018860_884_4414 1067
141 iso_pu_bacteria 2884994152 2884995259 1067
142 iso_pu_bacteria 8054472261 8054475864 1067
143 3300026067 Ga0207678_10000194 Ga0207678_100001949 1068
144 3300048904 Ga0496101_0012310 Ga0496101_0012310_1010_4378 1068
145 3300048924 Ga0496121_0009831 Ga0496121_0009831_1491_4859 1068
146 iso_pu_bacteria 2795385472 2795795676 1068
147 3300025972 Ga0207668_10007391 Ga0207668_100073914 1069
148 3300049581 Ga0501047_0000031 Ga0501047_0000031_143599_146910 1069
149 iso_pu_bacteria 2816332139 2816505465 1070
150 3300045976 Ga0466967_0035237 Ga0466967_0035237_402_3830 1071
151 3300049571 Ga0501034_0009238 Ga0501034_0009238_1172_4588 1071
152 3300053153 Ga0500616_0004798 Ga0500616_0004798_3737_7033 1073
153 iso_pu_bacteria 8057345674 8057348721 1075
154 iso_pu_bacteria 2887478801 2887482153 1076
155 iso_pu_bacteria 2515154088 2515495120 1078
156 iso_pu_bacteria 2515154129 2515719120 1078
157 iso_pu_bacteria 2515154137 2515754925 1078
158 iso_pu_bacteria 2515154202 2516083327 1078
159 iso_pu_bacteria 2515154203 2516088568 1078
160 iso_pu_bacteria 2582580736 2583149111 1078
161 3300005985 Ga0081539_10000253 Ga0081539_1000025342 1080
162 3300048920 Ga0496117_0000727 Ga0496117_0000727_9396_12683 1081
163 3300048928 Ga0496125_0004010 Ga0496125_0004010_13809_17096 1081
164 3300048929 Ga0496126_0006574 Ga0496126_0006574_1549_4836 1081
165 3300048929 Ga0496126_0051228 Ga0496126_0051228_26_3313 1081
166 3300005329 Ga0070683_100002409 Ga0070683_1000024099 1083
167 3300005334 Ga0068869_100020465 Ga0068869_1000204652 1083
168 3300005354 Ga0070675_100000270 Ga0070675_10000027010 1083
169 3300005441 Ga0070700_100001169 Ga0070700_1000011699 1083
170 3300005564 Ga0070664_100001407 Ga0070664_10000140719 1083
171 3300005577 Ga0068857_100002633 Ga0068857_10000263310 1083
172 3300009094 Ga0111539_10019540 Ga0111539_100195406 1083
173 3300025926 Ga0207659_10001393 Ga0207659_100013939 1083
174 3300025942 Ga0207689_10004062 Ga0207689_100040622 1083
175 3300025945 Ga0207679_10005055 Ga0207679_100050555 1083
176 3300026023 Ga0207677_10001058 Ga0207677_100010586 1083
177 3300026075 Ga0207708_10002616 Ga0207708_1000261610 1083
178 3300026116 Ga0207674_10004493 Ga0207674_100044932 1083
179 3300050511 nmdc:mga08y16_14586_c1 nmdc:mga08y16_14586_c1_877_4275 1083
180 3300006844 Ga0075428_100007150 Ga0075428_1000071502 1085
181 3300006846 Ga0075430_100001883 Ga0075430_10000188312 1085
182 3300006846 Ga0075430_100006649 Ga0075430_1000066491 1085
183 3300006847 Ga0075431_100017526 Ga0075431_1000175262 1085
184 3300006880 Ga0075429_100006651 Ga0075429_1000066512 1085
185 3300009147 Ga0114129_10007314 Ga0114129_100073142 1085
186 3300050507 nmdc:mga05p37_240_c1 nmdc:mga05p37_240_c1_48114_51470 1085
187 3300050508 nmdc:mga09592_14_c1 nmdc:mga09592_14_c1_592_3948 1085
188 3300050509 nmdc:mga0qj67_510_c1 nmdc:mga0qj67_510_c1_3028_6441 1085
189 3300050509 nmdc:mga0qj67_54_c4 nmdc:mga0qj67_54_c4_11897_15253 1085
190 3300050510 nmdc:mga06r32_18_c3 nmdc:mga06r32_18_c3_50117_53473 1085
191 iso_pu_bacteria 2995726249 2995727708 1090
192 iso_pu_bacteria 2827628540 2827633902 1098
193 iso_pu_bacteria 8055037949 8055038202 1102
194 iso_pu_bacteria 2675903058 2676476072 1105
195 3300049569 Ga0501032_0012240 Ga0501032_0012240_238_3642 1107
196 3300049573 Ga0501037_0019037 Ga0501037_0019037_622_4026 1107
197 3300048920 Ga0496117_0007579 Ga0496117_0007579_5571_9035 1110
198 3300048924 Ga0496121_0000040 Ga0496121_0000040_114177_117611 1110
199 3300048925 Ga0496122_0000387 Ga0496122_0000387_8996_12460 1110
200 3300048926 Ga0496123_0000219 Ga0496123_0000219_81212_84676 1110
201 3300048927 Ga0496124_0000915 Ga0496124_0000915_12651_16115 1110
202 3300049579 Ga0501043_0001294 Ga0501043_0001294_878_4261 1113
203 iso_pu_bacteria 2946080515 2946080547 1135
204 iso_pu_bacteria 8004182704 8004184794 1135
205 3300002738 JGI25154J39366_1001869 JGI25154J39366_10018694 1139
206 3300025246 Ga0209646_1000248 Ga0209646_10002486 1139

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17657

DNA_pol3_finger

Bacterial DNA polymerase III alpha subunit finger domain

673

839

0.98

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

1112

1187

0.96

PF14579

HHH_6

Helix-hairpin-helix motif

912

1033

0.96

PF07733

DNA_pol3_alpha

Bacterial DNA polymerase III alpha NTPase domain

594

670

0.95

PF07733

DNA_pol3_alpha

Bacterial DNA polymerase III alpha NTPase domain

333

519

0.94

PF02811

PHP

PHP domain

13

214

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gx8-assembly1.cif.gz_A crystal structure of a dna polymerase iii alpha-epsilon chimera 0.8328 54 315
4gx9-assembly4.cif.gz_D crystal structure of a dna polymerase iii alpha-epsilon chimera 0.8255 60 315
4gx9-assembly2.cif.gz_B crystal structure of a dna polymerase iii alpha-epsilon chimera 0.8194 60 315
1wyd-assembly1.cif.gz_A crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii 0.8099 1037 1127
1n9w-assembly1.cif.gz_B crystal structure of the non-discriminating and archaeal-type aspartyl-trna synthetase from thermus thermophilus 0.8095 1037 1127
ID Description Score Start End Superfamily
af_P9WNT5_44_334_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9207 49 317 3.20.20.140
af_P9WNT5_829_920_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9035 830 960 1.10.150.870
af_P9WNT5_829_920_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.8939 830 960 1.10.150.870
4iqjC01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8576 60 315 3.20.20.140
af_P9WNT5_44_334_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8496 49 317 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A7C4E876-F1-model_v4 Error-prone DNA polymerase 0.976 1021 1126 GO:0003676
GO:0006260
GO:0008408
AF-A0A2T6BK37-F1-model_v4 OB-fold nucleic acid binding protein 0.9711 1036 1127 GO:0003676
AF-A0A358MJ14-F1-model_v4 OB domain-containing protein 0.9706 1036 1127 GO:0003676
AF-A0A2S5JLD2-F1-model_v4 Error-prone DNA polymerase 0.9699 1036 1127 GO:0003676
GO:0006260
GO:0008408
AF-A0A4Q3REP6-F1-model_v4 deleted 0.969 1045 1127

Feature Viewer

pLDDT pTM Quality
84.91 0.85 High
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Predicted Structure (AlphaFold2)

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