F315720

General Info

Members Datasets Scaffolds Average Seq Length
206 131 412 398

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_51938_c1|nmdc:mga05p37_51938_c1_3199_4542
Length 447
Sequence VVRRAPLAFEVRRSSLAADQFLTLPAVGIGTDPPVGDSGYSVSMSAYLDSVPLSGIIRIRELMFTVTDPFRLDQGDVSFDAPDTVKSAMVRAIAENKTHYLQTAGVPRLRELIAAKLRAKNHIPVDDPEDVLVTNGGIHGLHLLCHALLEPGDEVLVPDPEWPPTPAQVLLARGVPVPCPLHESNGWRYDFDELESKITPKTRVLYLNSPNNPTGGVLTRADVERLAAIAEAHDLWVISDEAYEDVVFEGEHVSIASLPGMYERTIPLFTFSKSYAMTGLRLGYVAIKDPAVRDRARKLLFYTASNIASVVQFGGIGALEGSQDCIEAFRTELRARRDLFYSGIADLGGDIFTGAPPAGAFYAFVRIAEDARAFSPGESISWQLVEYLIKNGRIGCVPGVDFGANGEGYIRFCFARDRKELTGALESMRQLFGATLSGQAGLAGRAG

Samples

Sample ID Description Type Environment
1 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
98 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
99 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
100 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
101 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
102 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
103 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
104 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
105 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
112 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
113 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
127 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
128 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
129 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
130 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
131 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.46
Rhizosphere 98.54
Stem 0
Stem Tuber 0
Unclassified 9.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga05p37_51938_c1 3300050507 Bacteria 5040
2 Ga0070690_100089860 3300005330 Bacteria 2021
3 Ga0070690_100180576 3300005330 Bacteria 1458
4 Ga0070666_10019730 3300005335 Bacteria 4356
5 Ga0068868_100073774 3300005338 Bacteria 2725
6 Ga0070660_100005262 3300005339 Bacteria 8949
7 Ga0070668_100078722 3300005347 Bacteria 2578
8 Ga0070669_100028065 3300005353 Bacteria 4052
9 Ga0070675_100000157 3300005354 Bacteria 41165
10 Ga0070673_100026354 3300005364 Bacteria 4292
11 Ga0070659_100022639 3300005366 Bacteria 4798
12 Ga0070667_100310809 3300005367 Bacteria 1420
13 Ga0070714_100022694 3300005435 Bacteria 5147
14 Ga0070701_10014969 3300005438 Bacteria 3569
15 Ga0070694_100033229 3300005444 Bacteria 3393
16 Ga0070708_100022680 3300005445 Bacteria 5328
17 Ga0070681_10235463 3300005458 Bacteria 1745
18 Ga0070707_100018659 3300005468 Bacteria 6528
19 Ga0070699_100005876 3300005518 Bacteria 10718
20 Ga0070699_100100137 3300005518 Bacteria 2540
21 Ga0070679_100031036 3300005530 Bacteria 5279
22 Ga0070679_100033316 3300005530 Bacteria 5101
23 Ga0070684_100035053 3300005535 Bacteria 4293
24 Ga0070672_100064978 3300005543 Bacteria 2885
25 Ga0070695_100027953 3300005545 Bacteria 3497
26 Ga0070696_100031261 3300005546 Bacteria 3648
27 Ga0070665_100002202 3300005548 Bacteria 21753
28 Ga0070704_100051899 3300005549 Bacteria 2890
29 Ga0070704_100190020 3300005549 Bacteria 1650
30 Ga0068854_100002440 3300005578 Bacteria 11498
31 Ga0068854_100033770 3300005578 Bacteria 3568
32 Ga0070702_100003196 3300005615 Bacteria 7274
33 Ga0068864_100020989 3300005618 Bacteria 5469
34 Ga0068861_100058965 3300005719 Bacteria 2937
35 Ga0068863_100002629 3300005841 Bacteria 17782
36 Ga0068863_100142827 3300005841 Bacteria 2288
37 Ga0068858_100017992 3300005842 Bacteria 6619
38 Ga0068858_100025599 3300005842 Bacteria 5490
39 Ga0068858_100166443 3300005842 Bacteria 2078
40 Ga0068860_100016762 3300005843 Bacteria 7142
41 Ga0068860_100102133 3300005843 Bacteria 2736
42 Ga0081539_10002870 3300005985 Bacteria 22889
43 Ga0070716_100124756 3300006173 Bacteria 1618
44 Ga0097621_100010958 3300006237 Bacteria 6658
45 Ga0097621_100018735 3300006237 Bacteria 5296
46 Ga0068871_100006673 3300006358 Bacteria 8186
47 Ga0068871_100062430 3300006358 Bacteria 3045
48 Ga0075428_100174254 3300006844 Bacteria 2330
49 Ga0075433_10108860 3300006852 Bacteria 2458
50 Ga0075434_100001453 3300006871 Bacteria 19925
51 Ga0075434_100034950 3300006871 Bacteria 4967
52 Ga0075434_100055380 3300006871 Bacteria 3941
53 Ga0075429_100001835 3300006880 Bacteria 17572
54 Ga0068865_100001782 3300006881 Bacteria 12632
55 Ga0075436_100001150 3300006914 Bacteria 17889
56 Ga0075436_100045348 3300006914 Unclassified 3032
57 Ga0075436_100053932 3300006914 Bacteria 2775
58 Ga0075436_100057717 3300006914 Bacteria 2680
59 Ga0075435_100001851 3300007076 Bacteria 13731
60 Ga0075435_100022883 3300007076 Bacteria 4825
61 Ga0075435_100027865 3300007076 Bacteria 4424
62 Ga0075435_100052442 3300007076 Bacteria 3288
63 Ga0075435_100280423 3300007076 Unclassified 1423
64 Ga0105240_10149801 3300009093 Unclassified 2780
65 Ga0111539_10019149 3300009094 Bacteria 8456
66 Ga0111539_10078950 3300009094 Bacteria 3871
67 Ga0111539_10108929 3300009094 Bacteria 3251
68 Ga0111539_10246174 3300009094 Bacteria 2081
69 Ga0111539_10362938 3300009094 Bacteria 1686
70 Ga0105247_10014260 3300009101 Bacteria 4769
71 Ga0114129_10002817 3300009147 Bacteria 24261
72 Ga0114129_10008073 3300009147 Bacteria 14996
73 Ga0114129_10017734 3300009147 Bacteria 10137
74 Ga0114129_10022930 3300009147 Bacteria 8855
75 Ga0114129_10057071 3300009147 Bacteria 5466
76 Ga0114129_10120948 3300009147 Bacteria 3604
77 Ga0114129_10218197 3300009147 Bacteria 2575
78 Ga0114129_10220302 3300009147 Bacteria 2560
79 Ga0114129_10235769 3300009147 Bacteria 2462
80 Ga0114129_10594482 3300009147 Bacteria 1434
81 Ga0105243_10018592 3300009148 Bacteria 5266
82 Ga0105241_10158439 3300009174 Unclassified 1858
83 Ga0105242_10012345 3300009176 Bacteria 6573
84 Ga0105242_10070349 3300009176 Unclassified 2901
85 Ga0105242_10156013 3300009176 Bacteria 1994
86 Ga0105248_10014845 3300009177 Bacteria 8579
87 Ga0105248_10015097 3300009177 Bacteria 8507
88 Ga0105248_10018755 3300009177 Bacteria 7651
89 Ga0105248_10221035 3300009177 Bacteria 2132
90 Ga0105248_10323222 3300009177 Archaea 1738
91 Ga0105249_10007841 3300009553 Bacteria 9299
92 Ga0105249_10182312 3300009553 Bacteria 2044
93 Ga0105246_10229794 3300011119 Unclassified 1460
94 Ga0157370_10100095 3300013104 Bacteria 2716
95 Ga0157374_10020165 3300013296 Bacteria 5911
96 Ga0163162_10002553 3300013306 Bacteria 17232
97 Ga0163162_10020402 3300013306 Bacteria 6512
98 Ga0163163_10000001 3300014325 Bacteria 622185
99 Ga0163163_10030222 3300014325 Bacteria 5217
100 Ga0207680_10017879 3300025903 Bacteria 3754
101 Ga0207705_10078149 3300025909 Bacteria 2408
102 Ga0207654_10129176 3300025911 Unclassified 1597
103 Ga0207707_10194655 3300025912 Bacteria 1768
104 Ga0207695_10085226 3300025913 Bacteria 3189
105 Ga0207695_10146053 3300025913 Unclassified 2309
106 Ga0207660_10048395 3300025917 Unclassified 3008
107 Ga0207657_10012040 3300025919 Bacteria 8556
108 Ga0207652_10040554 3300025921 Bacteria 3954
109 Ga0207646_10017548 3300025922 Bacteria 6693
110 Ga0207681_10022849 3300025923 Bacteria 3993
111 Ga0207650_10189214 3300025925 Bacteria 1644
112 Ga0207659_10005381 3300025926 Bacteria 7756
113 Ga0207687_10028710 3300025927 Bacteria 3738
114 Ga0207664_10206346 3300025929 Bacteria 1698
115 Ga0207644_10011342 3300025931 Bacteria 5895
116 Ga0207644_10100693 3300025931 Bacteria 2170
117 Ga0207706_10225958 3300025933 Bacteria 1638
118 Ga0207709_10010702 3300025935 Bacteria 5053
119 Ga0207709_10101135 3300025935 Bacteria 1906
120 Ga0207704_10007722 3300025938 Bacteria 5101
121 Ga0207665_10069790 3300025939 Bacteria 2397
122 Ga0207691_10013103 3300025940 Bacteria 7936
123 Ga0207711_10029071 3300025941 Bacteria 4659
124 Ga0207661_10055084 3300025944 Unclassified 3188
125 Ga0207667_10097832 3300025949 Bacteria 3028
126 Ga0207712_10166427 3300025961 Bacteria 1719
127 Ga0207640_10001427 3300025981 Bacteria 12931
128 Ga0207658_10055596 3300025986 Bacteria 2934
129 Ga0207677_10162047 3300026023 Bacteria 1739
130 Ga0207703_10015048 3300026035 Bacteria 6039
131 Ga0207703_10040029 3300026035 Bacteria 3749
132 Ga0207708_10064229 3300026075 Bacteria 2804
133 Ga0207641_10000811 3300026088 Bacteria 33300
134 Ga0207676_10003969 3300026095 Bacteria 10437
135 Ga0207675_100001444 3300026118 Bacteria 23801
136 Ga0207675_100098621 3300026118 Bacteria 2752
137 Ga0207428_10016178 3300027907 Bacteria 6424
138 Ga0207428_10020695 3300027907 Bacteria 5581
139 Ga0207428_10034795 3300027907 Bacteria 4124
140 Ga0207428_10034844 3300027907 Bacteria 4120
141 Ga0268265_10278923 3300028380 Bacteria 1494
142 Ga0268264_10106541 3300028381 Bacteria 2447
143 Ga0268264_10231519 3300028381 Bacteria 1707
144 Ga0307408_100079856 3300031548 Bacteria 2442
145 Ga0307407_10124399 3300031903 Bacteria 1640
146 Ga0307409_100099312 3300031995 Unclassified 2410
147 Ga0307411_10037428 3300032005 Bacteria 3051
148 Ga0373959_0000827 3300034820 Bacteria 5287
149 Ga0373938_0000329 3300034957 Bacteria 7507
150 Ga0373928_0001531 3300035084 Bacteria 4493
151 Ga0373949_0002113 3300035090 Bacteria 5221
152 Ga0373951_0000570 3300035091 Bacteria 10216
153 Ga0373952_0000382 3300035092 Bacteria 7582
154 Ga0373932_0001857 3300035112 Bacteria 5660
155 Ga0373939_0000244 3300035114 Bacteria 14657
156 Ga0373960_0000751 3300035121 Bacteria 6761
157 Ga0373931_0000634 3300035691 Bacteria 14606
158 Ga0373937_0205974 3300036401 Archaea 1850
159 Ga0466963_0034799 3300044694 Bacteria 3279
160 Ga0453684_0191053 3300044712 Bacteria 2395
161 Ga0451576_0202497 3300045051 Bacteria 2073
162 Ga0495628_0066409 3300046516 Unclassified 2820
163 Ga0495621_0000859 3300046539 Bacteria 7726
164 Ga0495635_0023740 3300046663 Bacteria 4273
165 Ga0495613_0198309 3300046689 Bacteria 1416
166 Ga0495684_0031368 3300047471 Bacteria 4080
167 Ga0496108_0005776 3300048911 Bacteria 10025
168 Ga0496111_0286021 3300048914 Unclassified 1223
169 Ga0496113_0041443 3300048916 Unclassified 3398
170 Ga0501040_0029648 3300049576 Bacteria 3695
171 Ga0501071_0022187 3300049587 Bacteria 4425
172 nmdc:mga05p37_102979_c1 3300050507 Bacteria 3515
173 nmdc:mga05p37_112962_c1 3300050507 Unclassified 3340
174 nmdc:mga05p37_1974_c1 3300050507 Bacteria 23914
175 nmdc:mga05p37_23380_c1 3300050507 Bacteria 7499
176 nmdc:mga05p37_43082_c1 3300050507 Bacteria 5550
177 nmdc:mga05p37_436281_c1 3300050507 Bacteria 1520
178 nmdc:mga05p37_52517_c1 3300050507 Bacteria 5012
179 nmdc:mga05p37_56026_c1 3300050507 Bacteria 4853
180 nmdc:mga05p37_9599_c2 3300050507 Bacteria 7843
181 nmdc:mga08y16_186149_c1 3300050511 Unclassified 2155
182 nmdc:mga08y16_28614_c1 3300050511 Bacteria 5874
183 nmdc:mga08y16_36953_c1 3300050511 Bacteria 5129
184 nmdc:mga0n895_147356_c1 3300050512 Unclassified 2384
185 nmdc:mga0n895_1813_c1 3300050512 Bacteria 16254
186 nmdc:mga0n895_181551_c1 3300050512 Bacteria 2136
187 nmdc:mga0n895_32938_c1 3300050512 Bacteria 4977
188 nmdc:mga0rr50_1124_c1 3300050513 Bacteria 14540
189 nmdc:mga0rr50_138650_c1 3300050513 Bacteria 1955
190 nmdc:mga0rr50_27741_c1 3300050513 Bacteria 3970
191 nmdc:mga0rr50_30968_c1 3300050513 Unclassified 3794
192 nmdc:mga0rr50_67_c1 3300050513 Bacteria 62768
193 nmdc:mga08x19_106426_c1 3300050514 Bacteria 1866
194 nmdc:mga08x19_111283_c1 3300050514 Unclassified 1827
195 nmdc:mga08x19_8035_c1 3300050514 Bacteria 6271
196 nmdc:mga08x19_818_c1 3300050514 Bacteria 19749
197 nmdc:mga0a205_113938_c2 3300050515 Unclassified 2414
198 nmdc:mga0a205_201419_c1 3300050515 Bacteria 1881
199 nmdc:mga0a205_7578_c1 3300050515 Bacteria 9835
200 Ga0495601_0034306 3300053077 Bacteria 3165
201 Ga0495601_0087955 3300053077 Bacteria 1998
202 Ga0495619_0214048 3300053085 Bacteria 1335
203 Ga0590071_000140 3300059421 Bacteria 20523
204 Ga0590074_000729 3300059423 Bacteria 5006
205 Ga0590075_002113 3300059424 Bacteria 4782
206 Ga0590077_002438 3300059426 Bacteria 3981
207 nmdc:mga05p37_51938_c1
208 Ga0070690_100089860
209 Ga0070690_100180576
210 Ga0070666_10019730
211 Ga0068868_100073774
212 Ga0070660_100005262
213 Ga0070668_100078722
214 Ga0070669_100028065
215 Ga0070675_100000157
216 Ga0070673_100026354
217 Ga0070659_100022639
218 Ga0070667_100310809
219 Ga0070714_100022694
220 Ga0070701_10014969
221 Ga0070694_100033229
222 Ga0070708_100022680
223 Ga0070681_10235463
224 Ga0070707_100018659
225 Ga0070699_100005876
226 Ga0070699_100100137
227 Ga0070679_100031036
228 Ga0070679_100033316
229 Ga0070684_100035053
230 Ga0070672_100064978
231 Ga0070695_100027953
232 Ga0070696_100031261
233 Ga0070665_100002202
234 Ga0070704_100051899
235 Ga0070704_100190020
236 Ga0068854_100002440
237 Ga0068854_100033770
238 Ga0070702_100003196
239 Ga0068864_100020989
240 Ga0068861_100058965
241 Ga0068863_100002629
242 Ga0068863_100142827
243 Ga0068858_100017992
244 Ga0068858_100025599
245 Ga0068858_100166443
246 Ga0068860_100016762
247 Ga0068860_100102133
248 Ga0081539_10002870
249 Ga0070716_100124756
250 Ga0097621_100010958
251 Ga0097621_100018735
252 Ga0068871_100006673
253 Ga0068871_100062430
254 Ga0075428_100174254
255 Ga0075433_10108860
256 Ga0075434_100001453
257 Ga0075434_100034950
258 Ga0075434_100055380
259 Ga0075429_100001835
260 Ga0068865_100001782
261 Ga0075436_100001150
262 Ga0075436_100045348
263 Ga0075436_100053932
264 Ga0075436_100057717
265 Ga0075435_100001851
266 Ga0075435_100022883
267 Ga0075435_100027865
268 Ga0075435_100052442
269 Ga0075435_100280423
270 Ga0105240_10149801
271 Ga0111539_10019149
272 Ga0111539_10078950
273 Ga0111539_10108929
274 Ga0111539_10246174
275 Ga0111539_10362938
276 Ga0105247_10014260
277 Ga0114129_10002817
278 Ga0114129_10008073
279 Ga0114129_10017734
280 Ga0114129_10022930
281 Ga0114129_10057071
282 Ga0114129_10120948
283 Ga0114129_10218197
284 Ga0114129_10220302
285 Ga0114129_10235769
286 Ga0114129_10594482
287 Ga0105243_10018592
288 Ga0105241_10158439
289 Ga0105242_10012345
290 Ga0105242_10070349
291 Ga0105242_10156013
292 Ga0105248_10014845
293 Ga0105248_10015097
294 Ga0105248_10018755
295 Ga0105248_10221035
296 Ga0105248_10323222
297 Ga0105249_10007841
298 Ga0105249_10182312
299 Ga0105246_10229794
300 Ga0157370_10100095
301 Ga0157374_10020165
302 Ga0163162_10002553
303 Ga0163162_10020402
304 Ga0163163_10000001
305 Ga0163163_10030222
306 Ga0207680_10017879
307 Ga0207705_10078149
308 Ga0207654_10129176
309 Ga0207707_10194655
310 Ga0207695_10085226
311 Ga0207695_10146053
312 Ga0207660_10048395
313 Ga0207657_10012040
314 Ga0207652_10040554
315 Ga0207646_10017548
316 Ga0207681_10022849
317 Ga0207650_10189214
318 Ga0207659_10005381
319 Ga0207687_10028710
320 Ga0207664_10206346
321 Ga0207644_10011342
322 Ga0207644_10100693
323 Ga0207706_10225958
324 Ga0207709_10010702
325 Ga0207709_10101135
326 Ga0207704_10007722
327 Ga0207665_10069790
328 Ga0207691_10013103
329 Ga0207711_10029071
330 Ga0207661_10055084
331 Ga0207667_10097832
332 Ga0207712_10166427
333 Ga0207640_10001427
334 Ga0207658_10055596
335 Ga0207677_10162047
336 Ga0207703_10015048
337 Ga0207703_10040029
338 Ga0207708_10064229
339 Ga0207641_10000811
340 Ga0207676_10003969
341 Ga0207675_100001444
342 Ga0207675_100098621
343 Ga0207428_10016178
344 Ga0207428_10020695
345 Ga0207428_10034795
346 Ga0207428_10034844
347 Ga0268265_10278923
348 Ga0268264_10106541
349 Ga0268264_10231519
350 Ga0307408_100079856
351 Ga0307407_10124399
352 Ga0307409_100099312
353 Ga0307411_10037428
354 Ga0373959_0000827
355 Ga0373938_0000329
356 Ga0373928_0001531
357 Ga0373949_0002113
358 Ga0373951_0000570
359 Ga0373952_0000382
360 Ga0373932_0001857
361 Ga0373939_0000244
362 Ga0373960_0000751
363 Ga0373931_0000634
364 Ga0373937_0205974
365 Ga0466963_0034799
366 Ga0453684_0191053
367 Ga0451576_0202497
368 Ga0495628_0066409
369 Ga0495621_0000859
370 Ga0495635_0023740
371 Ga0495613_0198309
372 Ga0495684_0031368
373 Ga0496108_0005776
374 Ga0496111_0286021
375 Ga0496113_0041443
376 Ga0501040_0029648
377 Ga0501071_0022187
378 nmdc:mga05p37_102979_c1
379 nmdc:mga05p37_112962_c1
380 nmdc:mga05p37_1974_c1
381 nmdc:mga05p37_23380_c1
382 nmdc:mga05p37_43082_c1
383 nmdc:mga05p37_436281_c1
384 nmdc:mga05p37_52517_c1
385 nmdc:mga05p37_56026_c1
386 nmdc:mga05p37_9599_c2
387 nmdc:mga08y16_186149_c1
388 nmdc:mga08y16_28614_c1
389 nmdc:mga08y16_36953_c1
390 nmdc:mga0n895_147356_c1
391 nmdc:mga0n895_1813_c1
392 nmdc:mga0n895_181551_c1
393 nmdc:mga0n895_32938_c1
394 nmdc:mga0rr50_1124_c1
395 nmdc:mga0rr50_138650_c1
396 nmdc:mga0rr50_27741_c1
397 nmdc:mga0rr50_30968_c1
398 nmdc:mga0rr50_67_c1
399 nmdc:mga08x19_106426_c1
400 nmdc:mga08x19_111283_c1
401 nmdc:mga08x19_8035_c1
402 nmdc:mga08x19_818_c1
403 nmdc:mga0a205_113938_c2
404 nmdc:mga0a205_201419_c1
405 nmdc:mga0a205_7578_c1
406 Ga0495601_0034306
407 Ga0495601_0087955
408 Ga0495619_0214048
409 Ga0590071_000140
410 Ga0590074_000729
411 Ga0590075_002113
412 Ga0590077_002438

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

67

428

0.93

PF00266

Aminotran_5

Aminotransferase class-V

88

245

0.85

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

125

313

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bj4-assembly1.cif.gz_A thermus thermophilus aspartate aminotransferase tetra mutant 2 0.9461 26 385
1gc3-assembly3.cif.gz_F thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan 0.946 5 386
1gd9-assembly1.cif.gz_B crystall structure of pyrococcus protein-a1 0.9444 2 391
1b5o-assembly1.cif.gz_B thermus thermophilus aspartate aminotransferase single mutant 1 0.9391 5 386
5wml-assembly1.cif.gz_B arabidopsis thaliana prephenate aminotransferase mutant- k306a 0.9391 5 385
ID Description Score Start End Superfamily
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9693 40 275 3.40.640.10
af_A0A0R0HS10_77_301_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9662 55 276 3.40.640.10
1gd9A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.966 56 278 3.40.640.10
1gd9A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9617 56 278 3.40.640.10
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9612 40 275 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A521T5E0-F1-model_v4 Pyridoxal phosphate-dependent aminotransferase 0.9843 2 388 GO:0006520
GO:0008483
GO:0009058
GO:0030170
AF-A0A2V8G9N1-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9802 1 293 GO:0006520
GO:0008483
GO:0009058
GO:0030170
AF-A0A2V8G9N1-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9736 1 293 GO:0006520
GO:0008483
GO:0009058
GO:0030170
AF-A0A4Q4CNN9-F1-model_v4 Pyridoxal phosphate-dependent aminotransferase 0.9709 8 246 GO:0006520
GO:0008483
GO:0009058
GO:0030170
AF-A0A382Y5G9-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9702 35 299 GO:0006520
GO:0008483
GO:0009058
GO:0030170

Map