F315025
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 206 | 158 | 412 | 178 |
Family's Representative Sequence
| Representative Sequence | 3300009093|Ga0105240_10885742|Ga0105240_108857422 |
| Length | 207 |
| Sequence | MGVSVETRGRLDRCTRDDPDEDGPAVTDQLSTPLHATLHTNRGDIRLELYPDHAPKTVRNFVELAEGTREWQDPKTGERKQEPFFDGVTFHRVIQGFMIQGGDRLGTGTGGPGYSFDDEIHPGLDFRGPYVLAMANAGTRGGRGTNGSQFFITVGPTPHLQGKHTIFGSVADDASRKVVDAIAGTRTGRGDVPVEPVVIEKVTVERG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 2 | 3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 12 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 13 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 14 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 15 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 16 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 17 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 18 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 33 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 34 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 50 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 51 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 52 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 53 | 3300030734 | Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 | Metagenome | Rhizosphere |
| 54 | 3300030742 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 | Metagenome | Rhizosphere |
| 55 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 56 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 57 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 58 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 59 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 60 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 61 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 62 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 63 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 64 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 65 | 3300041410 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 | Metagenome | Rhizosphere |
| 66 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 67 | 3300041507 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG | Metagenome | Unclassified |
| 68 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 69 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 70 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 71 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 72 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 73 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 74 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 75 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 76 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 77 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 78 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 79 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 80 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 81 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 82 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 83 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 105 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 106 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 107 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 109 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 110 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 111 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 112 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 113 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 114 | 3300049129 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 115 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 131 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 137 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 138 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 139 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 142 | 2643221690 | Cellulomonas sp. Root485 | Isolate | Unclassified |
| 143 | 2643221694 | Cellulomonas sp. Root137 | Isolate | Unclassified |
| 144 | 2643221722 | Cellulomonas sp. Root930 | Isolate | Unclassified |
| 145 | 2738541272 | Promicromonospora sp. AC04 | Isolate | Unclassified |
| 146 | 2738543027 | Promicromonospora sp. CF082 | Isolate | Unclassified |
| 147 | 2739367654 | Promicromonospora sp. YR516 | Isolate | Unclassified |
| 148 | 2758568522 | Promicromonospora thailandica SAI-039 | Isolate | Unclassified |
| 149 | 2758568621 | Promicromonospora sukumoe SAI-064 | Isolate | Unclassified |
| 150 | 2808606394 | Promicromonospora sp. C35 | Isolate | Unclassified |
| 151 | 2848551377 | Brachybacterium saurashtrense DSM 23186 | Isolate | Unclassified |
| 152 | 2884994152 | Cellulomonas sp. H30R-01 | Isolate | Rhizosphere |
| 153 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 154 | 2912723979 | Streptomyces sp. NEAU-sy36 | Isolate | Rhizosphere |
| 155 | 2966921586 | Rathayibacter agropyri 617 | Isolate | Rhizosphere |
| 156 | 2990088156 | Streptomyces albidus CAP 215 | Isolate | Unclassified |
| 157 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 158 | 8056579771 | Promicromonospora iranensis UTMC 00792 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.32 |
| Metatranscriptomes | 1.94 |
| Isolates | 8.74 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.46 |
| Nodule | 0 |
| Rhizoplane | 5.34 |
| Rhizosphere | 83.01 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0105240_10885742 | 3300009093 | Bacteria | 961 |
| 2 | Ga0058862_12751877 | 3300004803 | Bacteria | 602 |
| 3 | Ga0070683_100005833 | 3300005329 | Bacteria | 10301 |
| 4 | Ga0070683_100374877 | 3300005329 | Bacteria | 1356 |
| 5 | Ga0070680_100030229 | 3300005336 | Bacteria | 4352 |
| 6 | Ga0070688_100498540 | 3300005365 | Bacteria | 918 |
| 7 | Ga0070714_100511772 | 3300005435 | Bacteria | 1146 |
| 8 | Ga0070663_100640386 | 3300005455 | Bacteria | 898 |
| 9 | Ga0070662_101388630 | 3300005457 | Bacteria | 605 |
| 10 | Ga0070679_100017183 | 3300005530 | Bacteria | 6998 |
| 11 | Ga0070679_100979325 | 3300005530 | Bacteria | 790 |
| 12 | Ga0070664_100029761 | 3300005564 | Bacteria | 4554 |
| 13 | Ga0070664_100240880 | 3300005564 | Bacteria | 1624 |
| 14 | Ga0068856_100015003 | 3300005614 | Bacteria | 7485 |
| 15 | Ga0068859_100052623 | 3300005617 | Bacteria | 4094 |
| 16 | Ga0068864_100112854 | 3300005618 | Bacteria | 2422 |
| 17 | Ga0068863_100016173 | 3300005841 | Bacteria | 7157 |
| 18 | Ga0068863_100052851 | 3300005841 | Bacteria | 3849 |
| 19 | Ga0081540_1000521 | 3300005983 | Bacteria | 37683 |
| 20 | Ga0081539_10000182 | 3300005985 | Bacteria | 148133 |
| 21 | Ga0081539_10166064 | 3300005985 | Bacteria | 1048 |
| 22 | Ga0075430_100004977 | 3300006846 | Bacteria | 11183 |
| 23 | Ga0097620_100052621 | 3300006931 | Bacteria | 4094 |
| 24 | Ga0105245_10334772 | 3300009098 | Bacteria | 1495 |
| 25 | Ga0114129_10533941 | 3300009147 | Bacteria | 1528 |
| 26 | Ga0105243_10201453 | 3300009148 | Bacteria | 1746 |
| 27 | Ga0105248_10014235 | 3300009177 | Bacteria | 8757 |
| 28 | Ga0105248_10971384 | 3300009177 | Bacteria | 959 |
| 29 | Ga0105238_10437425 | 3300009551 | Bacteria | 1304 |
| 30 | Ga0105249_10788868 | 3300009553 | Bacteria | 1014 |
| 31 | Ga0105239_10469991 | 3300010375 | Bacteria | 1428 |
| 32 | Ga0157373_10305675 | 3300013100 | Bacteria | 1129 |
| 33 | Ga0157373_10471889 | 3300013100 | Bacteria | 905 |
| 34 | Ga0157370_10307296 | 3300013104 | Bacteria | 1463 |
| 35 | Ga0157370_10990165 | 3300013104 | Bacteria | 761 |
| 36 | Ga0157369_10041449 | 3300013105 | Bacteria | 5026 |
| 37 | Ga0157369_10143126 | 3300013105 | Bacteria | 2529 |
| 38 | Ga0157372_10251689 | 3300013307 | Bacteria | 2051 |
| 39 | Ga0157375_10849436 | 3300013308 | Bacteria | 1059 |
| 40 | Ga0163163_10063873 | 3300014325 | Bacteria | 3652 |
| 41 | Ga0163163_10187846 | 3300014325 | Bacteria | 2114 |
| 42 | Ga0206356_11039571 | 3300020070 | Bacteria | 591 |
| 43 | Ga0206353_10371482 | 3300020082 | Bacteria | 1256 |
| 44 | Ga0207707_10501185 | 3300025912 | Bacteria | 1036 |
| 45 | Ga0207660_10113431 | 3300025917 | Bacteria | 2043 |
| 46 | Ga0207660_10630326 | 3300025917 | Bacteria | 874 |
| 47 | Ga0207652_10025231 | 3300025921 | Bacteria | 4939 |
| 48 | Ga0207694_10279327 | 3300025924 | Bacteria | 1371 |
| 49 | Ga0207694_10687142 | 3300025924 | Bacteria | 863 |
| 50 | Ga0207706_11169123 | 3300025933 | Bacteria | 640 |
| 51 | Ga0207709_10322141 | 3300025935 | Bacteria | 1157 |
| 52 | Ga0207670_10178788 | 3300025936 | Bacteria | 1597 |
| 53 | Ga0207711_10055965 | 3300025941 | Bacteria | 3388 |
| 54 | Ga0207661_10001724 | 3300025944 | Bacteria | 14963 |
| 55 | Ga0207661_10645126 | 3300025944 | Bacteria | 973 |
| 56 | Ga0207712_10525860 | 3300025961 | Bacteria | 1014 |
| 57 | Ga0207702_10053130 | 3300026078 | Bacteria | 3430 |
| 58 | Ga0207641_10062413 | 3300026088 | Bacteria | 3180 |
| 59 | Ga0207641_10081154 | 3300026088 | Bacteria | 2816 |
| 60 | Ga0207676_10271206 | 3300026095 | Bacteria | 1537 |
| 61 | Ga0268265_10048630 | 3300028380 | Bacteria | 3185 |
| 62 | Ga0268264_10241416 | 3300028381 | Bacteria | 1674 |
| 63 | Ga0307517_10097626 | 3300028786 | Bacteria | 2344 |
| 64 | Ga0307517_10261650 | 3300028786 | Bacteria | 1004 |
| 65 | Ga0316177_1206943 | 3300030731 | Bacteria | 2410 |
| 66 | Ga0316176_1220845 | 3300030732 | Bacteria | 2080 |
| 67 | Ga0314311_1071184 | 3300030733 | Bacteria | 1097 |
| 68 | Ga0316179_1102487 | 3300030734 | Bacteria | 1217 |
| 69 | Ga0316183_1036355 | 3300030742 | Bacteria | 1365 |
| 70 | Ga0307509_10112010 | 3300031507 | Bacteria | 2730 |
| 71 | Ga0307508_10032473 | 3300031616 | Bacteria | 4716 |
| 72 | Ga0307508_10062087 | 3300031616 | Bacteria | 3299 |
| 73 | Ga0307514_10127398 | 3300031649 | Bacteria | 1761 |
| 74 | Ga0307405_10332661 | 3300031731 | Bacteria | 1165 |
| 75 | Ga0307413_10572306 | 3300031824 | Bacteria | 920 |
| 76 | Ga0307410_10099021 | 3300031852 | Bacteria | 2086 |
| 77 | Ga0307416_100143810 | 3300032002 | Bacteria | 2173 |
| 78 | Ga0307416_101256508 | 3300032002 | Bacteria | 846 |
| 79 | Ga0307411_10297563 | 3300032005 | Bacteria | 1293 |
| 80 | Ga0395901_0238436 | 3300038443 | Bacteria | 1897 |
| 81 | Ga0395901_0965757 | 3300038443 | Bacteria | 830 |
| 82 | Ga0436363_0299040 | 3300039450 | Bacteria | 1610 |
| 83 | Ga0439461_0063655 | 3300041410 | Bacteria | 842 |
| 84 | Ga0451791_0163537 | 3300041451 | Bacteria | 1493 |
| 85 | Ga0451851_0916822 | 3300041507 | Bacteria | 711 |
| 86 | Ga0439431_0012994 | 3300041997 | Bacteria | 1918 |
| 87 | Ga0451577_0256840 | 3300042876 | Bacteria | 1582 |
| 88 | Ga0466965_0082877 | 3300044683 | Bacteria | 1623 |
| 89 | Ga0466965_0698875 | 3300044683 | Bacteria | 582 |
| 90 | Ga0466966_0113392 | 3300044684 | Bacteria | 1670 |
| 91 | Ga0466961_0018803 | 3300044693 | Bacteria | 4446 |
| 92 | Ga0466961_0078527 | 3300044693 | Bacteria | 2091 |
| 93 | Ga0466963_0020480 | 3300044694 | Bacteria | 4159 |
| 94 | Ga0466963_0062340 | 3300044694 | Bacteria | 2494 |
| 95 | Ga0466963_0091525 | 3300044694 | Bacteria | 2072 |
| 96 | Ga0466964_0061124 | 3300044706 | Bacteria | 1568 |
| 97 | Ga0466971_0004802 | 3300044719 | Bacteria | 5851 |
| 98 | Ga0466971_0147346 | 3300044719 | Bacteria | 1098 |
| 99 | Ga0466968_0246822 | 3300044735 | Bacteria | 847 |
| 100 | Ga0466970_0147128 | 3300044765 | Bacteria | 1300 |
| 101 | Ga0466957_0066574 | 3300044842 | Bacteria | 2221 |
| 102 | Ga0466957_0085781 | 3300044842 | Bacteria | 1967 |
| 103 | Ga0466960_0109004 | 3300044901 | Bacteria | 1436 |
| 104 | Ga0466959_0059824 | 3300045049 | Bacteria | 2773 |
| 105 | Ga0466958_0021485 | 3300045836 | Bacteria | 3773 |
| 106 | Ga0466958_0096373 | 3300045836 | Bacteria | 1835 |
| 107 | Ga0466958_0112278 | 3300045836 | Bacteria | 1701 |
| 108 | Ga0466967_0214832 | 3300045976 | Bacteria | 1825 |
| 109 | Ga0466967_0284989 | 3300045976 | Bacteria | 1586 |
| 110 | Ga0466967_1040709 | 3300045976 | Bacteria | 815 |
| 111 | Ga0495651_0001491 | 3300046462 | Bacteria | 18103 |
| 112 | Ga0495639_0289454 | 3300046475 | Bacteria | 815 |
| 113 | Ga0495594_0004439 | 3300046499 | Bacteria | 7214 |
| 114 | Ga0495594_0532576 | 3300046499 | Bacteria | 667 |
| 115 | Ga0495606_0001275 | 3300046507 | Bacteria | 34919 |
| 116 | Ga0495618_0016197 | 3300046514 | Bacteria | 4557 |
| 117 | Ga0495628_0027536 | 3300046516 | Bacteria | 4623 |
| 118 | Ga0495628_0196553 | 3300046516 | Bacteria | 1521 |
| 119 | Ga0495652_0003102 | 3300046529 | Bacteria | 16605 |
| 120 | Ga0495586_0160729 | 3300046535 | Bacteria | 1267 |
| 121 | Ga0495645_0070649 | 3300046543 | Bacteria | 2519 |
| 122 | Ga0495668_0000256 | 3300046616 | Bacteria | 75532 |
| 123 | Ga0495625_0002602 | 3300046660 | Bacteria | 19309 |
| 124 | Ga0495635_0013562 | 3300046663 | Bacteria | 5703 |
| 125 | Ga0495646_0112373 | 3300046680 | Bacteria | 1550 |
| 126 | Ga0495647_0038638 | 3300046681 | Bacteria | 1805 |
| 127 | Ga0495658_0009678 | 3300046683 | Bacteria | 4807 |
| 128 | Ga0495658_0107312 | 3300046683 | Bacteria | 1675 |
| 129 | Ga0495600_0327517 | 3300046809 | Bacteria | 962 |
| 130 | Ga0495581_0169656 | 3300047315 | Bacteria | 1276 |
| 131 | Ga0495676_0213821 | 3300047321 | Bacteria | 1332 |
| 132 | Ga0495683_0050428 | 3300047323 | Bacteria | 2083 |
| 133 | Ga0495614_0147652 | 3300048089 | Bacteria | 1048 |
| 134 | Ga0495626_0000088 | 3300048091 | Bacteria | 121421 |
| 135 | Ga0496103_0267819 | 3300048906 | Bacteria | 1099 |
| 136 | Ga0496104_0131625 | 3300048907 | Bacteria | 2403 |
| 137 | Ga0496108_0001853 | 3300048911 | Bacteria | 16905 |
| 138 | Ga0496108_1478862 | 3300048911 | Bacteria | 566 |
| 139 | Ga0496109_0371327 | 3300048912 | Bacteria | 1351 |
| 140 | Ga0496110_0252881 | 3300048913 | Bacteria | 1604 |
| 141 | Ga0496112_0014265 | 3300048915 | Bacteria | 7363 |
| 142 | Ga0496112_0026358 | 3300048915 | Bacteria | 5590 |
| 143 | Ga0496113_0794673 | 3300048916 | Bacteria | 752 |
| 144 | Ga0496114_1266794 | 3300048917 | Bacteria | 624 |
| 145 | Ga0496117_0338707 | 3300048920 | Bacteria | 781 |
| 146 | Ga0496126_0507207 | 3300048929 | Bacteria | 963 |
| 147 | Ga0501309_053525 | 3300049129 | Bacteria | 638 |
| 148 | Ga0501031_0004504 | 3300049568 | Bacteria | 9038 |
| 149 | Ga0501031_0435427 | 3300049568 | Bacteria | 847 |
| 150 | Ga0501032_0013760 | 3300049569 | Bacteria | 5741 |
| 151 | Ga0501032_0027336 | 3300049569 | Bacteria | 3920 |
| 152 | Ga0501033_0035739 | 3300049570 | Bacteria | 3724 |
| 153 | Ga0501033_0099139 | 3300049570 | Bacteria | 2127 |
| 154 | Ga0501034_0066260 | 3300049571 | Bacteria | 3624 |
| 155 | Ga0501034_0749605 | 3300049571 | Bacteria | 872 |
| 156 | Ga0501036_0013661 | 3300049572 | Bacteria | 6751 |
| 157 | Ga0501036_0027368 | 3300049572 | Bacteria | 4818 |
| 158 | Ga0501037_0060845 | 3300049573 | Bacteria | 2754 |
| 159 | Ga0501037_0097163 | 3300049573 | Bacteria | 2128 |
| 160 | Ga0501037_0121480 | 3300049573 | Bacteria | 1878 |
| 161 | Ga0501038_0003562 | 3300049574 | Bacteria | 14486 |
| 162 | Ga0501038_0029812 | 3300049574 | Bacteria | 4832 |
| 163 | Ga0501039_0107842 | 3300049575 | Bacteria | 2176 |
| 164 | Ga0501039_0375190 | 3300049575 | Bacteria | 1117 |
| 165 | Ga0501043_0050632 | 3300049579 | Bacteria | 3264 |
| 166 | Ga0501043_0121121 | 3300049579 | Bacteria | 2052 |
| 167 | Ga0501046_0017877 | 3300049580 | Bacteria | 5911 |
| 168 | Ga0501047_0046561 | 3300049581 | Bacteria | 4191 |
| 169 | Ga0501047_0099062 | 3300049581 | Bacteria | 2793 |
| 170 | Ga0501047_0241457 | 3300049581 | Bacteria | 1657 |
| 171 | Ga0501070_0234079 | 3300049586 | Bacteria | 1505 |
| 172 | Ga0501073_0064322 | 3300049589 | Bacteria | 2558 |
| 173 | Ga0501035_0002189 | 3300049822 | Bacteria | 19396 |
| 174 | Ga0501044_0011318 | 3300049823 | Bacteria | 9669 |
| 175 | Ga0501044_0366713 | 3300049823 | Bacteria | 1357 |
| 176 | Ga0501045_0121550 | 3300049824 | Bacteria | 1939 |
| 177 | nmdc:mga05p37_579551_c1 | 3300050507 | Bacteria | 1271 |
| 178 | nmdc:mga0qj67_1991_c1 | 3300050509 | Bacteria | 14543 |
| 179 | Ga0495601_0023562 | 3300053077 | Bacteria | 3783 |
| 180 | Ga0495601_0125500 | 3300053077 | Bacteria | 1669 |
| 181 | Ga0495612_0049179 | 3300053078 | Bacteria | 1729 |
| 182 | Ga0495619_0044138 | 3300053085 | Bacteria | 2925 |
| 183 | Ga0500646_0018005 | 3300053090 | Bacteria | 1858 |
| 184 | Ga0500641_0088880 | 3300053096 | Bacteria | 1318 |
| 185 | Ga0500568_0016684 | 3300053139 | Bacteria | 3257 |
| 186 | Ga0501084_0121620 | 3300054114 | Bacteria | 2195 |
| 187 | Ga0501082_0434483 | 3300060353 | Bacteria | 1146 |
| 188 | Ga0466962_0029768 | 3300061719 | Bacteria | 2614 |
| 189 | 2644504369 | 2643221690 | Bacteria | 4654705 |
| 190 | 2644524133 | 2643221694 | Bacteria | 4392972 |
| 191 | 2644668232 | 2643221722 | Bacteria | 4247614 |
| 192 | 2738694301 | 2738541272 | Bacteria | 6848551 |
| 193 | 2739325156 | 2738543027 | Bacteria | 6409078 |
| 194 | 2739609466 | 2739367654 | Bacteria | 6049412 |
| 195 | 2760305410 | 2758568522 | Bacteria | 5953541 |
| 196 | 2760620780 | 2758568621 | Bacteria | 5967089 |
| 197 | 2809025563 | 2808606394 | Bacteria | 6248540 |
| 198 | 2848554425 | 2848551377 | Bacteria | 3720646 |
| 199 | 2884997476 | 2884994152 | Bacteria | 4492978 |
| 200 | 2887485566 | 2887478801 | Bacteria | 8972725 |
| 201 | 2912724004 | 2912723979 | Bacteria | 8557534 |
| 202 | 2912731525 | 2912723979 | Bacteria | 8557534 |
| 203 | 2966924477 | 2966921586 | Bacteria | 3092803 |
| 204 | 2990091485 | 2990088156 | Bacteria | 6657676 |
| 205 | 8001782976 | 8001781756 | Bacteria | 9586736 |
| 206 | 8056584500 | 8056579771 | Bacteria | 5840325 |
| 207 | Ga0105240_10885742 | |||
| 208 | Ga0058862_12751877 | |||
| 209 | Ga0070683_100005833 | |||
| 210 | Ga0070683_100374877 | |||
| 211 | Ga0070680_100030229 | |||
| 212 | Ga0070688_100498540 | |||
| 213 | Ga0070714_100511772 | |||
| 214 | Ga0070663_100640386 | |||
| 215 | Ga0070662_101388630 | |||
| 216 | Ga0070679_100017183 | |||
| 217 | Ga0070679_100979325 | |||
| 218 | Ga0070664_100029761 | |||
| 219 | Ga0070664_100240880 | |||
| 220 | Ga0068856_100015003 | |||
| 221 | Ga0068859_100052623 | |||
| 222 | Ga0068864_100112854 | |||
| 223 | Ga0068863_100016173 | |||
| 224 | Ga0068863_100052851 | |||
| 225 | Ga0081540_1000521 | |||
| 226 | Ga0081539_10000182 | |||
| 227 | Ga0081539_10166064 | |||
| 228 | Ga0075430_100004977 | |||
| 229 | Ga0097620_100052621 | |||
| 230 | Ga0105245_10334772 | |||
| 231 | Ga0114129_10533941 | |||
| 232 | Ga0105243_10201453 | |||
| 233 | Ga0105248_10014235 | |||
| 234 | Ga0105248_10971384 | |||
| 235 | Ga0105238_10437425 | |||
| 236 | Ga0105249_10788868 | |||
| 237 | Ga0105239_10469991 | |||
| 238 | Ga0157373_10305675 | |||
| 239 | Ga0157373_10471889 | |||
| 240 | Ga0157370_10307296 | |||
| 241 | Ga0157370_10990165 | |||
| 242 | Ga0157369_10041449 | |||
| 243 | Ga0157369_10143126 | |||
| 244 | Ga0157372_10251689 | |||
| 245 | Ga0157375_10849436 | |||
| 246 | Ga0163163_10063873 | |||
| 247 | Ga0163163_10187846 | |||
| 248 | Ga0206356_11039571 | |||
| 249 | Ga0206353_10371482 | |||
| 250 | Ga0207707_10501185 | |||
| 251 | Ga0207660_10113431 | |||
| 252 | Ga0207660_10630326 | |||
| 253 | Ga0207652_10025231 | |||
| 254 | Ga0207694_10279327 | |||
| 255 | Ga0207694_10687142 | |||
| 256 | Ga0207706_11169123 | |||
| 257 | Ga0207709_10322141 | |||
| 258 | Ga0207670_10178788 | |||
| 259 | Ga0207711_10055965 | |||
| 260 | Ga0207661_10001724 | |||
| 261 | Ga0207661_10645126 | |||
| 262 | Ga0207712_10525860 | |||
| 263 | Ga0207702_10053130 | |||
| 264 | Ga0207641_10062413 | |||
| 265 | Ga0207641_10081154 | |||
| 266 | Ga0207676_10271206 | |||
| 267 | Ga0268265_10048630 | |||
| 268 | Ga0268264_10241416 | |||
| 269 | Ga0307517_10097626 | |||
| 270 | Ga0307517_10261650 | |||
| 271 | Ga0316177_1206943 | |||
| 272 | Ga0316176_1220845 | |||
| 273 | Ga0314311_1071184 | |||
| 274 | Ga0316179_1102487 | |||
| 275 | Ga0316183_1036355 | |||
| 276 | Ga0307509_10112010 | |||
| 277 | Ga0307508_10032473 | |||
| 278 | Ga0307508_10062087 | |||
| 279 | Ga0307514_10127398 | |||
| 280 | Ga0307405_10332661 | |||
| 281 | Ga0307413_10572306 | |||
| 282 | Ga0307410_10099021 | |||
| 283 | Ga0307416_100143810 | |||
| 284 | Ga0307416_101256508 | |||
| 285 | Ga0307411_10297563 | |||
| 286 | Ga0395901_0238436 | |||
| 287 | Ga0395901_0965757 | |||
| 288 | Ga0436363_0299040 | |||
| 289 | Ga0439461_0063655 | |||
| 290 | Ga0451791_0163537 | |||
| 291 | Ga0451851_0916822 | |||
| 292 | Ga0439431_0012994 | |||
| 293 | Ga0451577_0256840 | |||
| 294 | Ga0466965_0082877 | |||
| 295 | Ga0466965_0698875 | |||
| 296 | Ga0466966_0113392 | |||
| 297 | Ga0466961_0018803 | |||
| 298 | Ga0466961_0078527 | |||
| 299 | Ga0466963_0020480 | |||
| 300 | Ga0466963_0062340 | |||
| 301 | Ga0466963_0091525 | |||
| 302 | Ga0466964_0061124 | |||
| 303 | Ga0466971_0004802 | |||
| 304 | Ga0466971_0147346 | |||
| 305 | Ga0466968_0246822 | |||
| 306 | Ga0466970_0147128 | |||
| 307 | Ga0466957_0066574 | |||
| 308 | Ga0466957_0085781 | |||
| 309 | Ga0466960_0109004 | |||
| 310 | Ga0466959_0059824 | |||
| 311 | Ga0466958_0021485 | |||
| 312 | Ga0466958_0096373 | |||
| 313 | Ga0466958_0112278 | |||
| 314 | Ga0466967_0214832 | |||
| 315 | Ga0466967_0284989 | |||
| 316 | Ga0466967_1040709 | |||
| 317 | Ga0495651_0001491 | |||
| 318 | Ga0495639_0289454 | |||
| 319 | Ga0495594_0004439 | |||
| 320 | Ga0495594_0532576 | |||
| 321 | Ga0495606_0001275 | |||
| 322 | Ga0495618_0016197 | |||
| 323 | Ga0495628_0027536 | |||
| 324 | Ga0495628_0196553 | |||
| 325 | Ga0495652_0003102 | |||
| 326 | Ga0495586_0160729 | |||
| 327 | Ga0495645_0070649 | |||
| 328 | Ga0495668_0000256 | |||
| 329 | Ga0495625_0002602 | |||
| 330 | Ga0495635_0013562 | |||
| 331 | Ga0495646_0112373 | |||
| 332 | Ga0495647_0038638 | |||
| 333 | Ga0495658_0009678 | |||
| 334 | Ga0495658_0107312 | |||
| 335 | Ga0495600_0327517 | |||
| 336 | Ga0495581_0169656 | |||
| 337 | Ga0495676_0213821 | |||
| 338 | Ga0495683_0050428 | |||
| 339 | Ga0495614_0147652 | |||
| 340 | Ga0495626_0000088 | |||
| 341 | Ga0496103_0267819 | |||
| 342 | Ga0496104_0131625 | |||
| 343 | Ga0496108_0001853 | |||
| 344 | Ga0496108_1478862 | |||
| 345 | Ga0496109_0371327 | |||
| 346 | Ga0496110_0252881 | |||
| 347 | Ga0496112_0014265 | |||
| 348 | Ga0496112_0026358 | |||
| 349 | Ga0496113_0794673 | |||
| 350 | Ga0496114_1266794 | |||
| 351 | Ga0496117_0338707 | |||
| 352 | Ga0496126_0507207 | |||
| 353 | Ga0501309_053525 | |||
| 354 | Ga0501031_0004504 | |||
| 355 | Ga0501031_0435427 | |||
| 356 | Ga0501032_0013760 | |||
| 357 | Ga0501032_0027336 | |||
| 358 | Ga0501033_0035739 | |||
| 359 | Ga0501033_0099139 | |||
| 360 | Ga0501034_0066260 | |||
| 361 | Ga0501034_0749605 | |||
| 362 | Ga0501036_0013661 | |||
| 363 | Ga0501036_0027368 | |||
| 364 | Ga0501037_0060845 | |||
| 365 | Ga0501037_0097163 | |||
| 366 | Ga0501037_0121480 | |||
| 367 | Ga0501038_0003562 | |||
| 368 | Ga0501038_0029812 | |||
| 369 | Ga0501039_0107842 | |||
| 370 | Ga0501039_0375190 | |||
| 371 | Ga0501043_0050632 | |||
| 372 | Ga0501043_0121121 | |||
| 373 | Ga0501046_0017877 | |||
| 374 | Ga0501047_0046561 | |||
| 375 | Ga0501047_0099062 | |||
| 376 | Ga0501047_0241457 | |||
| 377 | Ga0501070_0234079 | |||
| 378 | Ga0501073_0064322 | |||
| 379 | Ga0501035_0002189 | |||
| 380 | Ga0501044_0011318 | |||
| 381 | Ga0501044_0366713 | |||
| 382 | Ga0501045_0121550 | |||
| 383 | nmdc:mga05p37_579551_c1 | |||
| 384 | nmdc:mga0qj67_1991_c1 | |||
| 385 | Ga0495601_0023562 | |||
| 386 | Ga0495601_0125500 | |||
| 387 | Ga0495612_0049179 | |||
| 388 | Ga0495619_0044138 | |||
| 389 | Ga0500646_0018005 | |||
| 390 | Ga0500641_0088880 | |||
| 391 | Ga0500568_0016684 | |||
| 392 | Ga0501084_0121620 | |||
| 393 | Ga0501082_0434483 | |||
| 394 | Ga0466962_0029768 | |||
| 395 | 2644504369 | |||
| 396 | 2644524133 | |||
| 397 | 2644668232 | |||
| 398 | 2738694301 | |||
| 399 | 2739325156 | |||
| 400 | 2739609466 | |||
| 401 | 2760305410 | |||
| 402 | 2760620780 | |||
| 403 | 2809025563 | |||
| 404 | 2848554425 | |||
| 405 | 2884997476 | |||
| 406 | 2887485566 | |||
| 407 | 2912724004 | |||
| 408 | 2912731525 | |||
| 409 | 2966924477 | |||
| 410 | 2990091485 | |||
| 411 | 8001782976 | |||
| 412 | 8056584500 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6lkb-assembly1.cif.gz_B | crystal structure of the peptidylprolyl isomerase domain of arabidopsis thaliana cyp71. | 0.9573 | 6 | 170 |
| 1w74-assembly2.cif.gz_B | x-ray structure of peptidyl-prolyl cis-trans isomerase a, ppia, rv0009, from mycobacterium tuberculosis. | 0.9555 | 5 | 172 |
| 2fu0-assembly1.cif.gz_A | plasmodium falciparum cyclophilin pfe0505w putative cyclosporin-binding domain | 0.9525 | 6 | 172 |
| 5yzg-assembly1.cif.gz_2 | the cryo-em structure of human catalytic step i spliceosome (c complex) at 4.1 angstrom resolution | 0.9511 | 6 | 172 |
| 2b71-assembly1.cif.gz_A | plasmodium yoelii cyclophilin-like protein | 0.9501 | 6 | 170 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1w74B00 | Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like | 0.9555 | 5 | 172 | 2.40.100.10 |
| af_A0A0R4J2Z8_2_164_2.40.100.10 | Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like | 0.9538 | 5 | 172 | 2.40.100.10 |
| af_Q9FJX0_326_510_2.40.100.10 | Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like | 0.9496 | 4 | 172 | 2.40.100.10 |
| 1xyhA00 | Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like | 0.9492 | 6 | 172 | 2.40.100.10 |
| af_P52012_262_474_2.40.100.10 | Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like | 0.9362 | 1 | 172 | 2.40.100.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6I2WG48-F1-model_v4 | Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) | 0.9994 | 6 | 160 |
GO:0006457
GO:0140839 GO:0140840 |
| AF-A0A0Q7Q9G8-F1-model_v4 | Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) | 0.9986 | 4 | 174 |
GO:0006457
GO:0140839 GO:0140840 |
| AF-A0A6J7D0B4-F1-model_v4 | peptidylprolyl isomerase (EC 5.2.1.8) | 0.9984 | 6 | 172 |
GO:0003755
GO:0006457 |
| AF-A0A0M8RFB6-F1-model_v4 | Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) | 0.9982 | 9 | 172 |
GO:0006457
GO:0140839 GO:0140840 |
| AF-A0A5C4N3V1-F1-model_v4 | Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) | 0.9982 | 6 | 168 |
GO:0006457
GO:0140839 GO:0140840 |