F314586

General Info

Members Datasets Scaffolds Average Seq Length
206 138 186 588

Family's Representative Sequence

Representative Sequence 3300002737|JGI25162J39368_1000583|JGI25162J39368_10005836
Length 618
Sequence MLRPGVLGRLLFLVACLLPGAYPGAARATEPGKDETPVQMLDHADRIKTANHDEFLQLLAELDQHANELSPAQQWRLRYLDAWQTAYDGRYDEARPQLNEIVNVSGDPTLQVRATATLVNILGISRNYEDAFTRLSMLIDELPSIRDNEARYQALGEAAQFLARAGQYELASGYAQQIISDAALRDHACQGMYFKLHALYRSNRIKGSDADFDRGIDTCLKGGQALFANAMRADRADFEIKQGHPEDAVALLQSHYGEVRGYRYPALIATFDNLLAQAYWQQGDMTQARQYANTTLAETEHDEYAEPRSLAYQVLYNVENRLGNAQAALEYHEKFMQADKGYLNDLTARALAYQVVKQQLLANKVQVDELNKQNQILQLQRELDRKDMETSRLYITLLITVVASIAFWLLRMKRSQMRFRRLATRDGLTGVHSRQHFVDEATATLRTAARSTRDACLVLLDLDHFKNVNDTHGHVIGDQVLRRAVAACQHHLRRHDIFGRLGGEEFAIYMPDCSASQARERAERIRQAIAAAPLWGETRHVLITASIGVASTDRSGYELRQLMTDADNAVHQAKQAGRNRVVYGQLGDFIVPAEPTDPVAADAATNEPAGRACGANRP

Samples

Sample ID Description Type Environment
1 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
2 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
3 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
4 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
5 2687453130 Dyella thiooxydans ATSB10 Isolate Unclassified
6 2734482264 Dyella sp. AD052 Isolate Unclassified
7 2738543009 Luteibacter sp. OK325 Isolate Unclassified
8 2739367700 Dyella sp. YR388 Isolate Unclassified
9 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
10 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
11 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
12 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
13 2884411467 Dyella sp. AD56 Isolate Rhizosphere
14 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
15 2919085039 Luteibacter sp. 1214 Isolate Unclassified
16 2919404418 Luteibacter sp. 3190 Isolate Unclassified
17 2928963466 Dyella japonica 1073 Isolate Unclassified
18 2941471342 Luteibacter sp. 621 Isolate Unclassified
19 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
20 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
21 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
22 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
23 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
24 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
25 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
26 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
27 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
28 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
29 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
30 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
31 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
32 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
33 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
34 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
35 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
36 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
39 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
52 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
53 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
54 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
61 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
63 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
64 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
80 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
85 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
86 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
87 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
88 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
89 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
90 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
91 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
92 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
93 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
94 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
95 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
96 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
97 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
98 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
99 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
104 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
105 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
106 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
107 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
108 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
109 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
110 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
111 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
117 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
118 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
119 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
122 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
123 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
127 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
136 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
137 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
138 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.81
Metatranscriptomes 0.49
Isolates 9.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.3
Nodule 0
Rhizoplane 2.91
Rhizosphere 52.43
Stem 0
Stem Tuber 0
Unclassified 21.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000438 3300001904 Bacteria 7871
2 JGI24739J22299_10007050 3300001989 Bacteria 4228
3 JGI24735J21928_10002375 3300002067 Bacteria 6553
4 JGI25162J39368_1000583 3300002737 Bacteria 26722
5 JGI25162J39368_1001151 3300002737 Bacteria 15806
6 JGI25162J39368_1001959 3300002737 Bacteria 9241
7 JGI25157J39369_1000933 3300002741 Bacteria 13828
8 JGI25163J39215_1000158 3300002771 Bacteria 26705
9 JGI25164J39214_1000193 3300002772 Bacteria 52696
10 JGI25164J39214_1000371 3300002772 Bacteria 26722
11 JGI25165J46597_1000700 3300003214 Bacteria 26722
12 rootH1_10039318 3300003316 Bacteria 5299
13 Ga0006562J51391_1059513 3300003578 Bacteria 4540
14 Ga0055533_1000410 3300003756 Bacteria 16685
15 Ga0055525_1000339 3300003759 Bacteria 34333
16 Ga0055527_1000264 3300003760 Bacteria 31695
17 Ga0055535_1000671 3300003761 Bacteria 26722
18 Ga0055535_1001369 3300003761 Bacteria 12765
19 Ga0055542_1000230 3300003762 Bacteria 65902
20 Ga0055542_1000388 3300003762 Bacteria 44329
21 Ga0055542_1000690 3300003762 Bacteria 26722
22 Ga0055542_1001340 3300003762 Bacteria 12765
23 Ga0055529_1000616 3300003763 Bacteria 26722
24 Ga0055529_1001063 3300003763 Bacteria 12733
25 Ga0070666_10000113 3300005335 Bacteria 55648
26 Ga0070689_100001176 3300005340 Bacteria 16566
27 Ga0070663_100005812 3300005455 Bacteria 7370
28 Ga0070681_10088681 3300005458 Bacteria 3045
29 Ga0070685_10005797 3300005466 Bacteria 6277
30 Ga0068864_100052050 3300005618 Bacteria 3529
31 Ga0068860_100072819 3300005843 Bacteria 3266
32 Ga0068860_100072862 3300005843 Bacteria 3265
33 Ga0105247_10001026 3300009101 Bacteria 21055
34 Ga0105238_10003514 3300009551 Bacteria 15609
35 Ga0105239_10026453 3300010375 Bacteria 6385
36 Ga0157370_10096230 3300013104 Bacteria 2778
37 Ga0157369_10007784 3300013105 Bacteria 12328
38 Ga0157378_10015806 3300013297 Bacteria 6609
39 Ga0182008_10011905 3300014497 Bacteria 4610
40 Ga0157379_10005653 3300014968 Bacteria 10743
41 Ga0157376_10021211 3300014969 Bacteria 5044
42 Ga0182006_1000036 3300015261 Bacteria 226098
43 Ga0182006_1010300 3300015261 Bacteria 4162
44 Ga0182005_1001098 3300015265 Bacteria 11318
45 Ga0183368_1002 3300015687 Bacteria 1865598
46 Ga0209760_100438 3300025207 Bacteria 9764
47 Ga0209784_100295 3300025224 Bacteria 27174
48 Ga0209674_100014 3300025226 Bacteria 704989
49 Ga0209674_100458 3300025226 Bacteria 18474
50 Ga0209672_100005 3300025228 Bacteria 1069303
51 Ga0209672_101193 3300025228 Bacteria 10558
52 Ga0209672_102485 3300025228 Bacteria 4474
53 Ga0209563_100087 3300025230 Bacteria 180595
54 Ga0207427_100084 3300025231 Bacteria 142663
55 Ga0207427_100117 3300025231 Bacteria 102251
56 Ga0209437_100037 3300025233 Bacteria 459730
57 Ga0209437_100138 3300025233 Bacteria 172839
58 Ga0209437_100240 3300025233 Bacteria 89740
59 Ga0209437_100835 3300025233 Bacteria 13427
60 Ga0209258_100006 3300025242 Bacteria 1069303
61 Ga0209258_100034 3300025242 Bacteria 437372
62 Ga0209258_100620 3300025242 Bacteria 28259
63 Ga0209646_1000726 3300025246 Bacteria 11634
64 Ga0209026_1000255 3300025250 Bacteria 66879
65 Ga0209026_1002083 3300025250 Bacteria 7866
66 Ga0209026_1002288 3300025250 Bacteria 7315
67 Ga0209148_1000001 3300025254 Bacteria 2545271
68 Ga0209148_1000002 3300025254 Bacteria 2399500
69 Ga0209148_1000012 3300025254 Bacteria 1069303
70 Ga0209148_1000065 3300025254 Bacteria 344489
71 Ga0209148_1002413 3300025254 Bacteria 6488
72 Ga0209759_1000778 3300025256 Bacteria 26737
73 Ga0209759_1001720 3300025256 Bacteria 11307
74 Ga0209759_1002550 3300025256 Bacteria 7908
75 Ga0209233_1000002 3300025261 Bacteria 2501366
76 Ga0209233_1000083 3300025261 Bacteria 336016
77 Ga0209455_1000008 3300025272 Bacteria 1069303
78 Ga0209455_1000054 3300025272 Bacteria 358936
79 Ga0207680_10001357 3300025903 Bacteria 11609
80 Ga0207647_10000015 3300025904 Bacteria 138626
81 Ga0207707_10069824 3300025912 Bacteria 3062
82 Ga0207649_10027337 3300025920 Bacteria 3346
83 Ga0207690_10004901 3300025932 Bacteria 7896
84 Ga0207640_10050978 3300025981 Bacteria 2688
85 Ga0207676_10113984 3300026095 Bacteria 2267
86 Ga0268264_10011630 3300028381 Bacteria 7258
87 Ga0395900_0004802 3300037418 Bacteria 14238
88 Ga0395900_0069687 3300037418 Bacteria 3614
89 Ga0395898_0001528 3300037466 Bacteria 31859
90 Ga0395898_0016999 3300037466 Bacteria 7427
91 Ga0395901_0000604 3300038443 Bacteria 41808
92 Ga0395901_0041636 3300038443 Bacteria 4761
93 Ga0395901_0081386 3300038443 Bacteria 3382
94 Ga0439436_0000001 3300041404 Bacteria 299341
95 Ga0466969_0002573 3300044656 Bacteria 9696
96 Ga0466961_0003571 3300044693 Bacteria 9696
97 Ga0466961_0014740 3300044693 Bacteria 5023
98 Ga0466970_0001435 3300044765 Bacteria 11530
99 Ga0466970_0001786 3300044765 Bacteria 10360
100 Ga0466970_0032581 3300044765 Bacteria 2753
101 Ga0466959_0036129 3300045049 Bacteria 3650
102 Ga0466959_0058730 3300045049 Bacteria 2801
103 Ga0495617_000697 3300046452 Bacteria 16773
104 Ga0495638_0000116 3300046460 Bacteria 128087
105 Ga0495638_0000178 3300046460 Bacteria 98340
106 Ga0495638_0000223 3300046460 Bacteria 78235
107 Ga0495638_0016256 3300046460 Bacteria 4985
108 Ga0495650_0000064 3300046471 Bacteria 275412
109 Ga0495650_0000371 3300046471 Bacteria 78324
110 Ga0495584_0006187 3300046491 Bacteria 6284
111 Ga0495585_0000067 3300046492 Bacteria 107222
112 Ga0495585_0001346 3300046492 Bacteria 19500
113 Ga0495607_0000370 3300046501 Bacteria 46319
114 Ga0495583_0015454 3300046506 Bacteria 4150
115 Ga0495606_0000166 3300046507 Bacteria 116524
116 Ga0495606_0000415 3300046507 Bacteria 71371
117 Ga0495610_0005362 3300046512 Bacteria 9150
118 Ga0495616_0000005 3300046513 Bacteria 260589
119 Ga0495616_0012059 3300046513 Bacteria 4920
120 Ga0495631_0000032 3300046518 Bacteria 85166
121 Ga0495631_0000040 3300046518 Bacteria 79773
122 Ga0495632_0000015 3300046519 Bacteria 237713
123 Ga0495632_0004179 3300046519 Bacteria 9885
124 Ga0495632_0006828 3300046519 Bacteria 7283
125 Ga0495632_0011306 3300046519 Bacteria 5215
126 Ga0495637_0008133 3300046520 Bacteria 5163
127 Ga0495648_0000142 3300046524 Bacteria 85573
128 Ga0495648_0001532 3300046524 Bacteria 22598
129 Ga0495609_0005257 3300046538 Bacteria 6871
130 Ga0495622_0001358 3300046557 Bacteria 12509
131 Ga0495668_0002516 3300046616 Bacteria 14979
132 Ga0495611_0000002 3300046648 Bacteria 705677
133 Ga0495625_0000002 3300046660 Bacteria 813323
134 Ga0495661_0000679 3300046665 Bacteria 33935
135 Ga0495670_0000428 3300046691 Bacteria 20168
136 Ga0495670_0001035 3300046691 Bacteria 13459
137 Ga0495670_0035469 3300046691 Bacteria 2486
138 Ga0495671_0000120 3300046692 Bacteria 71279
139 Ga0495649_0010307 3300046694 Bacteria 5519
140 Ga0495589_0000014 3300046794 Bacteria 246197
141 Ga0495660_0000105 3300046810 Bacteria 90404
142 Ga0495660_0000138 3300046810 Bacteria 79645
143 Ga0495683_0000439 3300047323 Bacteria 32988
144 Ga0495679_000003 3300047446 Bacteria 787868
145 Ga0495673_0000043 3300047469 Bacteria 284984
146 Ga0495673_0000291 3300047469 Bacteria 67241
147 Ga0495673_0000474 3300047469 Bacteria 43418
148 Ga0495686_0000024 3300047472 Bacteria 400343
149 Ga0495686_0000213 3300047472 Bacteria 107285
150 Ga0496106_0000793 3300048909 Bacteria 22858
151 Ga0496113_0005569 3300048916 Bacteria 7869
152 Ga0496115_0000565 3300048918 Bacteria 28778
153 Ga0496115_0001824 3300048918 Bacteria 15239
154 Ga0496115_0011415 3300048918 Bacteria 6660
155 Ga0496115_0029360 3300048918 Bacteria 4318
156 Ga0496117_0039410 3300048920 Bacteria 3488
157 Ga0496118_0001055 3300048921 Bacteria 43004
158 Ga0496118_0001137 3300048921 Bacteria 40981
159 Ga0496119_0001748 3300048922 Bacteria 25329
160 Ga0496120_0000608 3300048923 Bacteria 54347
161 Ga0496121_0000109 3300048924 Bacteria 187307
162 Ga0496121_0000184 3300048924 Bacteria 138791
163 Ga0496121_0000609 3300048924 Bacteria 67016
164 Ga0496122_0079531 3300048925 Bacteria 2290
165 Ga0496123_0020142 3300048926 Bacteria 5230
166 Ga0496123_0032561 3300048926 Bacteria 3771
167 Ga0496123_0038223 3300048926 Bacteria 3377
168 Ga0496124_0061706 3300048927 Bacteria 3141
169 Ga0496125_0039109 3300048928 Bacteria 4091
170 Ga0496126_0002616 3300048929 Bacteria 23990
171 Ga0496126_0010047 3300048929 Bacteria 9987
172 Ga0495678_001321 3300049459 Bacteria 19875
173 Ga0495678_031980 3300049459 Bacteria 2187
174 Ga0495682_0006865 3300049460 Bacteria 4583
175 Ga0501032_0058858 3300049569 Bacteria 2579
176 Ga0501033_0003031 3300049570 Bacteria 13987
177 Ga0501037_0065222 3300049573 Bacteria 2653
178 Ga0501043_0007968 3300049579 Bacteria 8368
179 Ga0501046_0003433 3300049580 Bacteria 14536
180 Ga0501046_0051956 3300049580 Bacteria 3232
181 Ga0501035_0012754 3300049822 Bacteria 7766
182 Ga0501044_0054086 3300049823 Bacteria 4128
183 Ga0500643_000165 3300053087 Bacteria 66133
184 Ga0500555_000227 3300053103 Bacteria 25228
185 Ga0500633_0000169 3300053160 Bacteria 8815
186 Ga0500645_000646 3300053730 Bacteria 22127

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025242 Ga0209258_100620 Ga0209258_10062012 500
2 3300048924 Ga0496121_0000109 Ga0496121_0000109_76720_78441 517
3 3300048925 Ga0496122_0079531 Ga0496122_0079531_525_2246 517
4 3300048926 Ga0496123_0038223 Ga0496123_0038223_1104_2825 517
5 3300015687 Ga0183368_1002 Ga0183368_10021116 523
6 3300044693 Ga0466961_0014740 Ga0466961_0014740_408_2015 525
7 3300044765 Ga0466970_0001786 Ga0466970_0001786_2887_4494 525
8 3300045049 Ga0466959_0036129 Ga0466959_0036129_430_2037 525
9 3300013105 Ga0157369_10007784 Ga0157369_100077843 529
10 3300003756 Ga0055533_1000410 Ga0055533_100041015 530
11 3300025226 Ga0209674_100014 Ga0209674_100014344 530
12 3300001989 JGI24739J22299_10007050 JGI24739J22299_100070502 536
13 3300002067 JGI24735J21928_10002375 JGI24735J21928_100023754 536
14 3300048916 Ga0496113_0005569 Ga0496113_0005569_563_2350 536
15 3300048918 Ga0496115_0000565 Ga0496115_0000565_2194_3981 536
16 3300002737 JGI25162J39368_1001959 JGI25162J39368_10019594 552
17 3300003762 Ga0055542_1000230 Ga0055542_100023046 552
18 3300025233 Ga0209437_100138 Ga0209437_100138103 552
19 3300025250 Ga0209026_1002288 Ga0209026_10022882 552
20 3300025254 Ga0209148_1000002 Ga0209148_1000002450 552
21 3300049460 Ga0495682_0006865 Ga0495682_0006865_25_1752 553
22 3300049822 Ga0501035_0012754 Ga0501035_0012754_2053_3834 554
23 3300049823 Ga0501044_0054086 Ga0501044_0054086_374_2155 554
24 3300025256 Ga0209759_1001720 Ga0209759_10017206 558
25 3300048926 Ga0496123_0020142 Ga0496123_0020142_1182_2924 560
26 3300047469 Ga0495673_0000291 Ga0495673_0000291_20410_22182 561
27 3300025226 Ga0209674_100458 Ga0209674_1004584 562
28 3300025233 Ga0209437_100835 Ga0209437_10083511 562
29 3300025254 Ga0209148_1002413 Ga0209148_10024133 562
30 3300005335 Ga0070666_10000113 Ga0070666_1000011338 563
31 3300013297 Ga0157378_10015806 Ga0157378_100158064 563
32 3300025903 Ga0207680_10001357 Ga0207680_100013575 563
33 iso_pu_bacteria 2884411467 2884412753 564
34 3300005618 Ga0068864_100052050 Ga0068864_1000520503 565
35 3300005843 Ga0068860_100072862 Ga0068860_1000728622 565
36 3300014968 Ga0157379_10005653 Ga0157379_1000565311 565
37 3300026095 Ga0207676_10113984 Ga0207676_101139842 565
38 3300028381 Ga0268264_10011630 Ga0268264_100116305 565
39 3300046471 Ga0495650_0000371 Ga0495650_0000371_21187_22959 565
40 3300009101 Ga0105247_10001026 Ga0105247_1000102620 566
41 3300014497 Ga0182008_10011905 Ga0182008_100119054 566
42 3300015261 Ga0182006_1000036 Ga0182006_100003611 566
43 3300046616 Ga0495668_0002516 Ga0495668_0002516_10570_12342 566
44 3300046810 Ga0495660_0000138 Ga0495660_0000138_60280_62052 566
45 3300047469 Ga0495673_0000043 Ga0495673_0000043_222393_224165 566
46 3300048924 Ga0496121_0000609 Ga0496121_0000609_32686_34458 566
47 3300005466 Ga0070685_10005797 Ga0070685_100057975 567
48 3300046507 Ga0495606_0000415 Ga0495606_0000415_65143_66990 567
49 3300046694 Ga0495649_0010307 Ga0495649_0010307_230_2077 567
50 3300048918 Ga0496115_0001824 Ga0496115_0001824_8148_9995 567
51 3300048929 Ga0496126_0002616 Ga0496126_0002616_4002_5849 567
52 3300049459 Ga0495678_031980 Ga0495678_031980_292_2139 567
53 3300003759 Ga0055525_1000339 Ga0055525_10003392 568
54 3300003760 Ga0055527_1000264 Ga0055527_10002642 568
55 3300003761 Ga0055535_1001369 Ga0055535_10013699 568
56 3300003762 Ga0055542_1001340 Ga0055542_10013409 568
57 3300003763 Ga0055529_1001063 Ga0055529_10010632 568
58 3300025228 Ga0209672_100005 Ga0209672_100005902 568
59 3300025230 Ga0209563_100087 Ga0209563_100087152 568
60 3300025242 Ga0209258_100006 Ga0209258_100006902 568
61 3300025254 Ga0209148_1000012 Ga0209148_1000012902 568
62 3300025272 Ga0209455_1000008 Ga0209455_1000008902 568
63 3300046519 Ga0495632_0000015 Ga0495632_0000015_59410_61221 569
64 3300025254 Ga0209148_1000065 Ga0209148_100006532 570
65 3300053160 Ga0500633_0000169 Ga0500633_0000169_16_1728 570
66 3300037418 Ga0395900_0069687 Ga0395900_0069687_1609_3390 572
67 iso_pu_bacteria 2818991440 2819564676 573
68 iso_pu_bacteria 2919085039 2919088579 573
69 3300044765 Ga0466970_0032581 Ga0466970_0032581_895_2652 574
70 3300003762 Ga0055542_1000388 Ga0055542_100038832 575
71 3300005458 Ga0070681_10088681 Ga0070681_100886812 575
72 3300025228 Ga0209672_101193 Ga0209672_1011934 575
73 3300025912 Ga0207707_10069824 Ga0207707_100698243 575
74 3300005340 Ga0070689_100001176 Ga0070689_1000011768 576
75 3300005843 Ga0068860_100072819 Ga0068860_1000728193 576
76 3300009551 Ga0105238_10003514 Ga0105238_100035148 576
77 3300025920 Ga0207649_10027337 Ga0207649_100273372 576
78 3300048918 Ga0496115_0029360 Ga0496115_0029360_1013_2866 576
79 iso_pu_bacteria 2687453130 2687583681 576
80 3300025250 Ga0209026_1002083 Ga0209026_10020836 577
81 3300025256 Ga0209759_1002550 Ga0209759_10025506 577
82 3300025981 Ga0207640_10050978 Ga0207640_100509781 577
83 3300046492 Ga0495585_0001346 Ga0495585_0001346_13519_15255 577
84 3300046513 Ga0495616_0000005 Ga0495616_0000005_209007_210743 577
85 3300046519 Ga0495632_0004179 Ga0495632_0004179_6878_8614 577
86 3300046691 Ga0495670_0035469 Ga0495670_0035469_715_2451 577
87 iso_pu_bacteria 2919404418 2919405520 577
88 3300003316 rootH1_10039318 rootH1_100393182 579
89 3300037418 Ga0395900_0004802 Ga0395900_0004802_10509_12356 579
90 3300037466 Ga0395898_0016999 Ga0395898_0016999_3064_4911 579
91 3300038443 Ga0395901_0000604 Ga0395901_0000604_1883_3730 579
92 3300038443 Ga0395901_0081386 Ga0395901_0081386_1214_3061 579
93 3300048918 Ga0496115_0011415 Ga0496115_0011415_4700_6565 579
94 iso_pu_bacteria 2537561836 2538832946 579
95 iso_pu_bacteria 2643221577 2643896987 579
96 iso_pu_bacteria 2643221685 2644479193 579
97 3300003578 Ga0006562J51391_1059513 Ga0006562J51391_10595133 580
98 3300005455 Ga0070663_100005812 Ga0070663_1000058125 580
99 3300014969 Ga0157376_10021211 Ga0157376_100212112 580
100 3300015261 Ga0182006_1010300 Ga0182006_10103002 580
101 3300015265 Ga0182005_1001098 Ga0182005_10010986 580
102 3300041404 Ga0439436_0000001 Ga0439436_0000001_94763_96538 580
103 3300046460 Ga0495638_0000116 Ga0495638_0000116_16371_18218 580
104 3300046460 Ga0495638_0000223 Ga0495638_0000223_48692_50542 580
105 3300046471 Ga0495650_0000064 Ga0495650_0000064_114136_115983 580
106 3300046491 Ga0495584_0006187 Ga0495584_0006187_1327_3087 580
107 3300046507 Ga0495606_0000166 Ga0495606_0000166_43800_45560 580
108 3300046512 Ga0495610_0005362 Ga0495610_0005362_2105_3880 580
109 3300046557 Ga0495622_0001358 Ga0495622_0001358_543_2393 580
110 3300046691 Ga0495670_0001035 Ga0495670_0001035_9798_11573 580
111 3300047323 Ga0495683_0000439 Ga0495683_0000439_24758_26518 580
112 3300047472 Ga0495686_0000024 Ga0495686_0000024_349948_351720 580
113 3300048921 Ga0496118_0001137 Ga0496118_0001137_21075_22847 580
114 3300048924 Ga0496121_0000184 Ga0496121_0000184_71681_73441 580
115 3300048927 Ga0496124_0061706 Ga0496124_0061706_445_2235 580
116 3300048929 Ga0496126_0010047 Ga0496126_0010047_730_2577 580
117 3300049569 Ga0501032_0058858 Ga0501032_0058858_666_2414 580
118 3300049573 Ga0501037_0065222 Ga0501037_0065222_868_2616 580
119 3300049579 Ga0501043_0007968 Ga0501043_0007968_4537_6285 580
120 3300049580 Ga0501046_0051956 Ga0501046_0051956_1358_3127 580
121 iso_pu_bacteria 2734482264 2735834976 580
122 iso_pu_bacteria 2739367700 2739733468 580
123 iso_pu_bacteria 2842914999 2842916072 580
124 iso_pu_bacteria 2842918807 2842919195 580
125 iso_pu_bacteria 2884338543 2884339168 580
126 iso_pu_bacteria 2928963466 2928966753 580
127 3300001904 JGI24736J21556_1000438 JGI24736J21556_10004384 581
128 3300002737 JGI25162J39368_1000583 JGI25162J39368_10005836 581
129 3300002737 JGI25162J39368_1001151 JGI25162J39368_10011518 581
130 3300002741 JGI25157J39369_1000933 JGI25157J39369_10009335 581
131 3300002771 JGI25163J39215_1000158 JGI25163J39215_10001585 581
132 3300002772 JGI25164J39214_1000193 JGI25164J39214_100019311 581
133 3300002772 JGI25164J39214_1000371 JGI25164J39214_10003716 581
134 3300003214 JGI25165J46597_1000700 JGI25165J46597_10007006 581
135 3300003761 Ga0055535_1000671 Ga0055535_10006716 581
136 3300003762 Ga0055542_1000690 Ga0055542_10006906 581
137 3300003763 Ga0055529_1000616 Ga0055529_100061616 581
138 3300010375 Ga0105239_10026453 Ga0105239_100264532 581
139 3300013104 Ga0157370_10096230 Ga0157370_100962301 581
140 3300025207 Ga0209760_100438 Ga0209760_1004383 581
141 3300025224 Ga0209784_100295 Ga0209784_10029515 581
142 3300025228 Ga0209672_102485 Ga0209672_1024853 581
143 3300025231 Ga0207427_100084 Ga0207427_10008498 581
144 3300025231 Ga0207427_100117 Ga0207427_10011756 581
145 3300025233 Ga0209437_100037 Ga0209437_10003725 581
146 3300025233 Ga0209437_100240 Ga0209437_10024056 581
147 3300025242 Ga0209258_100034 Ga0209258_100034219 581
148 3300025246 Ga0209646_1000726 Ga0209646_10007263 581
149 3300025250 Ga0209026_1000255 Ga0209026_100025515 581
150 3300025254 Ga0209148_1000001 Ga0209148_1000001485 581
151 3300025256 Ga0209759_1000778 Ga0209759_100077815 581
152 3300025261 Ga0209233_1000002 Ga0209233_10000021746 581
153 3300025261 Ga0209233_1000083 Ga0209233_1000083279 581
154 3300025272 Ga0209455_1000054 Ga0209455_1000054188 581
155 3300025904 Ga0207647_10000015 Ga0207647_1000001532 581
156 3300025932 Ga0207690_10004901 Ga0207690_100049017 581
157 3300037466 Ga0395898_0001528 Ga0395898_0001528_5288_7063 581
158 3300038443 Ga0395901_0041636 Ga0395901_0041636_641_2446 581
159 3300044656 Ga0466969_0002573 Ga0466969_0002573_7540_9318 581
160 3300044693 Ga0466961_0003571 Ga0466961_0003571_379_2157 581
161 3300044765 Ga0466970_0001435 Ga0466970_0001435_8437_10215 581
162 3300045049 Ga0466959_0058730 Ga0466959_0058730_379_2157 581
163 3300046452 Ga0495617_000697 Ga0495617_000697_12748_14520 581
164 3300046460 Ga0495638_0000178 Ga0495638_0000178_79041_80813 581
165 3300046460 Ga0495638_0016256 Ga0495638_0016256_2528_4300 581
166 3300046492 Ga0495585_0000067 Ga0495585_0000067_52555_54327 581
167 3300046501 Ga0495607_0000370 Ga0495607_0000370_31680_33452 581
168 3300046506 Ga0495583_0015454 Ga0495583_0015454_1752_3524 581
169 3300046513 Ga0495616_0012059 Ga0495616_0012059_1815_3587 581
170 3300046518 Ga0495631_0000032 Ga0495631_0000032_14760_16532 581
171 3300046518 Ga0495631_0000040 Ga0495631_0000040_24032_25804 581
172 3300046519 Ga0495632_0006828 Ga0495632_0006828_3357_5129 581
173 3300046519 Ga0495632_0011306 Ga0495632_0011306_1101_2873 581
174 3300046520 Ga0495637_0008133 Ga0495637_0008133_1680_3452 581
175 3300046524 Ga0495648_0000142 Ga0495648_0000142_13089_14861 581
176 3300046524 Ga0495648_0001532 Ga0495648_0001532_12785_14557 581
177 3300046538 Ga0495609_0005257 Ga0495609_0005257_3638_5410 581
178 3300046648 Ga0495611_0000002 Ga0495611_0000002_13626_15398 581
179 3300046660 Ga0495625_0000002 Ga0495625_0000002_13626_15398 581
180 3300046665 Ga0495661_0000679 Ga0495661_0000679_12538_14310 581
181 3300046691 Ga0495670_0000428 Ga0495670_0000428_9130_10902 581
182 3300046692 Ga0495671_0000120 Ga0495671_0000120_60424_62196 581
183 3300046794 Ga0495589_0000014 Ga0495589_0000014_13626_15398 581
184 3300046810 Ga0495660_0000105 Ga0495660_0000105_44972_46744 581
185 3300047446 Ga0495679_000003 Ga0495679_000003_772422_774194 581
186 3300047469 Ga0495673_0000474 Ga0495673_0000474_28021_29793 581
187 3300047472 Ga0495686_0000213 Ga0495686_0000213_26726_28498 581
188 3300048909 Ga0496106_0000793 Ga0496106_0000793_6930_8702 581
189 3300048920 Ga0496117_0039410 Ga0496117_0039410_314_2086 581
190 3300048921 Ga0496118_0001055 Ga0496118_0001055_10202_11974 581
191 3300048922 Ga0496119_0001748 Ga0496119_0001748_13246_15021 581
192 3300048923 Ga0496120_0000608 Ga0496120_0000608_17399_19174 581
193 3300048926 Ga0496123_0032561 Ga0496123_0032561_1447_3219 581
194 3300048928 Ga0496125_0039109 Ga0496125_0039109_699_2471 581
195 3300049459 Ga0495678_001321 Ga0495678_001321_4478_6250 581
196 3300049570 Ga0501033_0003031 Ga0501033_0003031_5019_6794 581
197 3300049580 Ga0501046_0003433 Ga0501046_0003433_11142_12986 581
198 3300053087 Ga0500643_000165 Ga0500643_000165_50688_52460 581
199 3300053103 Ga0500555_000227 Ga0500555_000227_13727_15499 581
200 3300053730 Ga0500645_000646 Ga0500645_000646_1631_3403 581
201 iso_pu_bacteria 2593339238 2595446225 581
202 iso_pu_bacteria 2643221577 2643894350 581
203 iso_pu_bacteria 2643221685 2644476553 581
204 iso_pu_bacteria 2738543009 2739227887 581
205 iso_pu_bacteria 2904463128 2904465323 581
206 iso_pu_bacteria 2941471342 2941471898 581

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00990

GGDEF

Diguanylate cyclase, GGDEF domain

423

580

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ign-assembly1.cif.gz_A crystal structure of the ggdef domain from marinobacter aquaeolei diguanylate cyclase complexed with c-di-gmp - northeast structural genomics consortium target mqr89a 0.9548 409 573
6tts-assembly1.cif.gz_B crystal structure of the ggdef domain of dgcb from caulobacter crescentus in complex with c-di-gmp 0.9509 409 571
7a7e-assembly1.cif.gz_A structure of a delta-n mutant - e232start - of pa1120 (tpbb or yfin) from pseudomonas aeruginosa (pao1) comprising only the ggdef domain 0.9495 413 571
4urs-assembly1.cif.gz_A crystal structure of ggdef domain from t.maritima 0.9489 413 571
6tts-assembly1.cif.gz_A crystal structure of the ggdef domain of dgcb from caulobacter crescentus in complex with c-di-gmp 0.9482 409 571
ID Description Score Start End Superfamily
af_P76330_387_561_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9697 401 570 3.30.70.270
af_Q2G061_179_351_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9618 406 572 3.30.70.270
3ignA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.952 413 573 3.30.70.270
af_P77334_235_407_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9495 410 571 3.30.70.270
4ursA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9489 413 571 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A0M2UYH0-F1-model_v4 Two-component response regulator 0.9762 398 571 GO:0005886
GO:0043709
GO:0052621
GO:1902201
AF-A0A3M1DA69-F1-model_v4 GGDEF domain-containing protein 0.9762 441 571 GO:0052621
AF-A0A2V8S8M1-F1-model_v4 GGDEF domain-containing protein 0.9697 399 570 GO:0005886
GO:0016491
GO:0043709
GO:0052621
GO:1902201
AF-V4QG84-F1-model_v4 diguanylate cyclase (EC 2.7.7.65) 0.9641 393 571 GO:0052621
AF-A0A537AH88-F1-model_v4 diguanylate cyclase (EC 2.7.7.65) 0.9634 386 571 GO:0005886
GO:0043709
GO:0052621
GO:1902201

Feature Viewer

pLDDT pTM Quality
88.26 0.6 Medium
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Predicted Structure (AlphaFold2)

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