F314408
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 205 | 168 | 189 | 256 |
Family's Representative Sequence
| Representative Sequence | 3300049592|Ga0501076_0424640|Ga0501076_0424640_153_1019 |
| Length | 288 |
| Sequence | VIPNVLTIAGSDSGGGAGIQADLKTFSALGAYGASVITALTAQNTRTVSAIHDVPPESVTAQIDAVFEDIEFAAVKIGMLSRPAIIDAVADGLHRHRARNIVLDPVMVAKSGDRLLGEDAVAALRQHLLPLATLVTPNLPEAAVLLDLEEAADGAGMIDVAARLRALGPQAVLLKGGHLAKGASSVDVLDDGAEPLTLAAPRIATANTHGTGCTLSSAIAALLARGLPLRAAVREAKAYVTAAIGAADRLKVGHGHGPVHHFHALWRGQNDGQQADLPTAPGSSLNRP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237141 | Bradyrhizobium sp. TV2a.2 | Isolate | Nodule |
| 2 | 2643221568 | Rhizobium sp. Root564 | Isolate | Unclassified |
| 3 | 2643221736 | Bosea sp. Root483D1 | Isolate | Unclassified |
| 4 | 2775506925 | Saccharopolyspora phatthalungensis NRRL B-24798 | Isolate | Rhizosphere |
| 5 | 2791355197 | Bradyrhizobium sp. C9 | Isolate | Nodule |
| 6 | 2818991467 | Bosea vestrisii 3192 | Isolate | Unclassified |
| 7 | 2841911363 | Bosea caraganae RCAM04685 | Isolate | Nodule |
| 8 | 2841917233 | Bosea caraganae RCAM04680 | Isolate | Nodule |
| 9 | 2863067949 | Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) | Isolate | Rhizosphere |
| 10 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 11 | 2874620515 | Bradyrhizobium nanningense CCBAU 53390 | Isolate | Unclassified |
| 12 | 2904666416 | Bradyrhizobium nanningense CCBAU 51757 | Isolate | Unclassified |
| 13 | 2917699015 | Bosea sp. F3-2 | Isolate | Rhizosphere |
| 14 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 15 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 16 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 17 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 18 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 19 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 20 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 23 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 29 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 30 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 31 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 32 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 34 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 35 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 36 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 37 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 38 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 39 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 41 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 42 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 43 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 45 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 59 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 61 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 82 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 83 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 84 | 3300033442 | Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 | Metagenome | Nodule |
| 85 | 3300035085 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 | Metagenome | Rhizosphere |
| 86 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 87 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 88 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 89 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 90 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 91 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 92 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 93 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 94 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 95 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 96 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 97 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 98 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 99 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 100 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 101 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 102 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 103 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 104 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 105 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 130 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 131 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 132 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 133 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 134 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 135 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 136 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 137 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 138 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 143 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 146 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 147 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 148 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 149 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 150 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 151 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 152 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 153 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 154 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 155 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 156 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 157 | 3300053105 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere | Metagenome | Endosphere |
| 158 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 159 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 160 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 161 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 162 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 163 | 3300053729 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere | Metagenome | Endosphere |
| 164 | 3300053736 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere | Metagenome | Endosphere |
| 165 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 166 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
| 167 | 8056689827 | Bradyrhizobium semiaridum WSM 1704 | Isolate | Nodule |
| 168 | 8057529695 | Bosea vestrisii A18/4-2 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 92.2 |
| Metatranscriptomes | 0 |
| Isolates | 7.8 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 18.05 |
| Nodule | 3.41 |
| Rhizoplane | 3.41 |
| Rhizosphere | 66.34 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 8.78 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25151J46595_10000135 | 3300003187 | Bacteria | 98528 |
| 2 | JGI25153J46596_10000519 | 3300003215 | Bacteria | 24283 |
| 3 | JGI25153J46596_10002340 | 3300003215 | Bacteria | 10989 |
| 4 | Ga0055526_1004186 | 3300003771 | Bacteria | 8772 |
| 5 | Ga0055524_1000023 | 3300003775 | Bacteria | 221408 |
| 6 | Ga0055531_10007017 | 3300003794 | Bacteria | 6240 |
| 7 | Ga0055531_10013055 | 3300003794 | Bacteria | 3857 |
| 8 | Ga0065165_1000139 | 3300005262 | Bacteria | 126209 |
| 9 | Ga0065165_1001291 | 3300005262 | Bacteria | 28158 |
| 10 | Ga0070658_10194764 | 3300005327 | Bacteria | 1709 |
| 11 | Ga0070683_100002204 | 3300005329 | Bacteria | 15431 |
| 12 | Ga0070683_100110770 | 3300005329 | Bacteria | 2590 |
| 13 | Ga0070680_100034695 | 3300005336 | Bacteria | 4068 |
| 14 | Ga0070659_100128624 | 3300005366 | Bacteria | 2055 |
| 15 | Ga0070659_100201088 | 3300005366 | Bacteria | 1640 |
| 16 | Ga0070709_10004038 | 3300005434 | Bacteria | 7918 |
| 17 | Ga0070714_100060407 | 3300005435 | Bacteria | 3253 |
| 18 | Ga0070713_100019754 | 3300005436 | Bacteria | 5154 |
| 19 | Ga0070713_100069844 | 3300005436 | Bacteria | 2963 |
| 20 | Ga0070710_10068560 | 3300005437 | Bacteria | 2038 |
| 21 | Ga0070681_10154592 | 3300005458 | Bacteria | 2219 |
| 22 | Ga0070679_100090014 | 3300005530 | Bacteria | 3056 |
| 23 | Ga0070684_100108570 | 3300005535 | Bacteria | 2486 |
| 24 | Ga0068853_100456891 | 3300005539 | Bacteria | 1202 |
| 25 | Ga0070665_100051605 | 3300005548 | Bacteria | 4124 |
| 26 | Ga0070665_100766803 | 3300005548 | Bacteria | 978 |
| 27 | Ga0068855_100164471 | 3300005563 | Bacteria | 2516 |
| 28 | Ga0068857_100042465 | 3300005577 | Bacteria | 4034 |
| 29 | Ga0068852_100614769 | 3300005616 | Bacteria | 1092 |
| 30 | Ga0068851_10152351 | 3300005834 | Bacteria | 1265 |
| 31 | Ga0081455_10039987 | 3300005937 | Bacteria | 4139 |
| 32 | Ga0081455_10117762 | 3300005937 | Bacteria | 2099 |
| 33 | Ga0081455_10131228 | 3300005937 | Bacteria | 1959 |
| 34 | Ga0081540_1019035 | 3300005983 | Bacteria | 4191 |
| 35 | Ga0081540_1020565 | 3300005983 | Bacteria | 3964 |
| 36 | Ga0070717_10019658 | 3300006028 | Bacteria | 5301 |
| 37 | Ga0070717_10271734 | 3300006028 | Bacteria | 1501 |
| 38 | Ga0070717_10386731 | 3300006028 | Bacteria | 1255 |
| 39 | Ga0070716_100374044 | 3300006173 | Bacteria | 1016 |
| 40 | Ga0070712_100061456 | 3300006175 | Bacteria | 2654 |
| 41 | Ga0075367_10206492 | 3300006178 | Bacteria | 1228 |
| 42 | Ga0097621_100212572 | 3300006237 | Bacteria | 1683 |
| 43 | Ga0075434_100043048 | 3300006871 | Bacteria | 4477 |
| 44 | Ga0105240_10041052 | 3300009093 | Bacteria | 5910 |
| 45 | Ga0105240_10238891 | 3300009093 | Bacteria | 2107 |
| 46 | Ga0111539_10858145 | 3300009094 | Bacteria | 1056 |
| 47 | Ga0105242_10373560 | 3300009176 | Bacteria | 1323 |
| 48 | Ga0105237_10019726 | 3300009545 | Bacteria | 6961 |
| 49 | Ga0105237_10075078 | 3300009545 | Bacteria | 3372 |
| 50 | Ga0105238_10003423 | 3300009551 | Bacteria | 15820 |
| 51 | Ga0105238_10105826 | 3300009551 | Bacteria | 2795 |
| 52 | Ga0105239_10246251 | 3300010375 | Bacteria | 2007 |
| 53 | Ga0157370_10147835 | 3300013104 | Bacteria | 2187 |
| 54 | Ga0157380_10225047 | 3300014326 | Bacteria | 1681 |
| 55 | Ga0157376_10078769 | 3300014969 | Bacteria | 2823 |
| 56 | Ga0209233_1001723 | 3300025261 | Bacteria | 8456 |
| 57 | Ga0209233_1002023 | 3300025261 | Bacteria | 7681 |
| 58 | Ga0209130_1000148 | 3300025284 | Bacteria | 109763 |
| 59 | Ga0209675_1001362 | 3300025291 | Bacteria | 14345 |
| 60 | Ga0209675_1020803 | 3300025291 | Bacteria | 1767 |
| 61 | Ga0209025_1000016 | 3300025294 | Bacteria | 770739 |
| 62 | Ga0209025_1001717 | 3300025294 | Bacteria | 26581 |
| 63 | Ga0209025_1072323 | 3300025294 | Bacteria | 1216 |
| 64 | Ga0209564_1000076 | 3300025295 | Bacteria | 283602 |
| 65 | Ga0209564_1014839 | 3300025295 | Bacteria | 3210 |
| 66 | Ga0209758_1000075 | 3300025297 | Bacteria | 271585 |
| 67 | Ga0209758_1001651 | 3300025297 | Bacteria | 25303 |
| 68 | Ga0209758_1015426 | 3300025297 | Bacteria | 3956 |
| 69 | Ga0209256_1000083 | 3300025299 | Bacteria | 221460 |
| 70 | Ga0209256_1003531 | 3300025299 | Bacteria | 10869 |
| 71 | Ga0209257_1002081 | 3300025304 | Bacteria | 21090 |
| 72 | Ga0207707_10001221 | 3300025912 | Bacteria | 24149 |
| 73 | Ga0207707_10132904 | 3300025912 | Bacteria | 2176 |
| 74 | Ga0207671_10023287 | 3300025914 | Bacteria | 4671 |
| 75 | Ga0207693_10126691 | 3300025915 | Bacteria | 2007 |
| 76 | Ga0207660_10002761 | 3300025917 | Bacteria | 11506 |
| 77 | Ga0207660_10076003 | 3300025917 | Bacteria | 2455 |
| 78 | Ga0207657_10001936 | 3300025919 | Bacteria | 22360 |
| 79 | Ga0207649_10029146 | 3300025920 | Bacteria | 3258 |
| 80 | Ga0207652_10003582 | 3300025921 | Bacteria | 12811 |
| 81 | Ga0207694_10012398 | 3300025924 | Bacteria | 6423 |
| 82 | Ga0207700_10026909 | 3300025928 | Bacteria | 4018 |
| 83 | Ga0207690_10056070 | 3300025932 | Bacteria | 2656 |
| 84 | Ga0207709_10141013 | 3300025935 | Bacteria | 1657 |
| 85 | Ga0207661_10026385 | 3300025944 | Bacteria | 4427 |
| 86 | Ga0207639_10096111 | 3300026041 | Bacteria | 2383 |
| 87 | Ga0207702_10511695 | 3300026078 | Bacteria | 1171 |
| 88 | Ga0207676_10696859 | 3300026095 | Bacteria | 984 |
| 89 | Ga0207674_10002416 | 3300026116 | Bacteria | 23583 |
| 90 | Ga0207683_10145323 | 3300026121 | Bacteria | 2138 |
| 91 | Ga0207698_10520643 | 3300026142 | Bacteria | 1161 |
| 92 | Ga0268266_10515157 | 3300028379 | Bacteria | 1143 |
| 93 | Ga0307515_10183481 | 3300028794 | Bacteria | 2032 |
| 94 | Ga0307509_10171117 | 3300031507 | Bacteria | 2051 |
| 95 | Ga0316577_10010209 | 3300031733 | Bacteria | 5063 |
| 96 | Ga0315911_1000014 | 3300033442 | Bacteria | 207605 |
| 97 | Ga0373929_0010952 | 3300035085 | Bacteria | 1702 |
| 98 | Ga0373934_0004755 | 3300035086 | Bacteria | 5022 |
| 99 | Ga0373936_0065445 | 3300035113 | Bacteria | 1491 |
| 100 | Ga0373953_0091054 | 3300035117 | Bacteria | 1276 |
| 101 | Ga0373946_0026225 | 3300035171 | Bacteria | 2297 |
| 102 | Ga0373946_0183710 | 3300035171 | Bacteria | 994 |
| 103 | Ga0373933_0163565 | 3300035724 | Bacteria | 1414 |
| 104 | Ga0373947_0082163 | 3300035725 | Bacteria | 1996 |
| 105 | Ga0373947_0096813 | 3300035725 | Bacteria | 1849 |
| 106 | Ga0373937_0072890 | 3300036401 | Bacteria | 3167 |
| 107 | Ga0373937_0345405 | 3300036401 | Bacteria | 1409 |
| 108 | Ga0316582_0020725 | 3300036647 | Bacteria | 3871 |
| 109 | Ga0373925_0131991 | 3300037068 | Bacteria | 1948 |
| 110 | Ga0395898_0483058 | 3300037466 | Bacteria | 1178 |
| 111 | Ga0395905_0118731 | 3300037471 | Bacteria | 2486 |
| 112 | Ga0316581_0108975 | 3300037588 | Bacteria | 853 |
| 113 | Ga0436364_1339672 | 3300037853 | Bacteria | 3621 |
| 114 | Ga0395901_0476901 | 3300038443 | Bacteria | 1273 |
| 115 | Ga0436363_0833744 | 3300039450 | Bacteria | 4393 |
| 116 | Ga0453684_0803380 | 3300044712 | Bacteria | 1014 |
| 117 | Ga0466959_0085146 | 3300045049 | Bacteria | 2275 |
| 118 | Ga0466958_0269612 | 3300045836 | Bacteria | 1090 |
| 119 | Ga0466967_0005449 | 3300045976 | Bacteria | 8824 |
| 120 | Ga0466967_0074903 | 3300045976 | Bacteria | 3041 |
| 121 | Ga0466967_0913573 | 3300045976 | Bacteria | 873 |
| 122 | Ga0495617_056745 | 3300046452 | Bacteria | 1298 |
| 123 | Ga0495603_0017522 | 3300046455 | Bacteria | 4334 |
| 124 | Ga0495590_0058510 | 3300046457 | Bacteria | 1348 |
| 125 | Ga0495629_0043281 | 3300046459 | Bacteria | 3162 |
| 126 | Ga0495662_0077721 | 3300046476 | Bacteria | 1612 |
| 127 | Ga0495606_0229110 | 3300046507 | Bacteria | 1042 |
| 128 | Ga0495610_0081845 | 3300046512 | Bacteria | 1481 |
| 129 | Ga0495630_0071492 | 3300046517 | Bacteria | 2611 |
| 130 | Ga0495632_0096812 | 3300046519 | Bacteria | 1393 |
| 131 | Ga0495648_0001376 | 3300046524 | Bacteria | 23940 |
| 132 | Ga0495640_0083882 | 3300046533 | Bacteria | 2114 |
| 133 | Ga0495598_0052329 | 3300046537 | Bacteria | 1233 |
| 134 | Ga0495645_0023583 | 3300046543 | Bacteria | 4457 |
| 135 | Ga0495656_0014064 | 3300046615 | Bacteria | 2992 |
| 136 | Ga0495634_0018541 | 3300046642 | Bacteria | 4954 |
| 137 | Ga0495625_0034739 | 3300046660 | Bacteria | 3719 |
| 138 | Ga0495635_0009848 | 3300046663 | Bacteria | 6681 |
| 139 | Ga0495588_0052183 | 3300046674 | Bacteria | 2107 |
| 140 | Ga0495623_0220501 | 3300046679 | Bacteria | 1081 |
| 141 | Ga0495646_0065331 | 3300046680 | Bacteria | 2154 |
| 142 | Ga0495647_0040599 | 3300046681 | Bacteria | 1769 |
| 143 | Ga0495674_0024377 | 3300047319 | Bacteria | 5559 |
| 144 | Ga0495672_0094499 | 3300047320 | Bacteria | 1634 |
| 145 | Ga0495680_0004868 | 3300047322 | Bacteria | 12718 |
| 146 | Ga0496100_0015847 | 3300048903 | Bacteria | 4412 |
| 147 | Ga0496104_0016795 | 3300048907 | Bacteria | 6653 |
| 148 | Ga0496105_0115357 | 3300048908 | Bacteria | 2216 |
| 149 | Ga0496108_0066888 | 3300048911 | Bacteria | 3031 |
| 150 | Ga0496108_0633416 | 3300048911 | Bacteria | 930 |
| 151 | Ga0496115_0102852 | 3300048918 | Bacteria | 2343 |
| 152 | Ga0496115_0261629 | 3300048918 | Bacteria | 1423 |
| 153 | Ga0496116_0000026 | 3300048919 | Bacteria | 450803 |
| 154 | Ga0496121_0004951 | 3300048924 | Bacteria | 17472 |
| 155 | Ga0496123_0085286 | 3300048926 | Bacteria | 1900 |
| 156 | Ga0496123_0183702 | 3300048926 | Bacteria | 1089 |
| 157 | Ga0496126_0000069 | 3300048929 | Bacteria | 246935 |
| 158 | Ga0496126_0219340 | 3300048929 | Bacteria | 1598 |
| 159 | Ga0496126_0226167 | 3300048929 | Bacteria | 1569 |
| 160 | Ga0496126_0235631 | 3300048929 | Bacteria | 1531 |
| 161 | Ga0501031_0214785 | 3300049568 | Bacteria | 1253 |
| 162 | Ga0501039_0143534 | 3300049575 | Bacteria | 1876 |
| 163 | Ga0501039_0393176 | 3300049575 | Bacteria | 1089 |
| 164 | Ga0501042_0052827 | 3300049578 | Bacteria | 2899 |
| 165 | Ga0501047_0223544 | 3300049581 | Bacteria | 1738 |
| 166 | Ga0501048_0482046 | 3300049582 | Bacteria | 889 |
| 167 | Ga0501070_0376979 | 3300049586 | Bacteria | 1149 |
| 168 | Ga0501071_0206589 | 3300049587 | Bacteria | 1476 |
| 169 | Ga0501072_0111753 | 3300049588 | Bacteria | 2175 |
| 170 | Ga0501074_0018939 | 3300049590 | Bacteria | 5001 |
| 171 | Ga0501075_0138347 | 3300049591 | Bacteria | 1855 |
| 172 | Ga0501076_0424640 | 3300049592 | Bacteria | 1094 |
| 173 | Ga0501077_0237293 | 3300049593 | Bacteria | 1159 |
| 174 | Ga0501080_0066311 | 3300049742 | Bacteria | 3357 |
| 175 | Ga0501081_0414690 | 3300049743 | Bacteria | 998 |
| 176 | Ga0501045_0111228 | 3300049824 | Bacteria | 2031 |
| 177 | nmdc:mga08y16_353320_c1 | 3300050511 | Bacteria | 1509 |
| 178 | nmdc:mga0sz30_61375_c1 | 3300050516 | Bacteria | 1265 |
| 179 | Ga0495612_0065691 | 3300053078 | Bacteria | 1507 |
| 180 | Ga0500578_0237567 | 3300053086 | Bacteria | 1102 |
| 181 | Ga0500557_000067 | 3300053105 | Bacteria | 40265 |
| 182 | Ga0500642_0000242 | 3300053130 | Bacteria | 21057 |
| 183 | Ga0500577_0000032 | 3300053142 | Bacteria | 33173 |
| 184 | Ga0500622_0002153 | 3300053156 | Bacteria | 14612 |
| 185 | Ga0500627_0034198 | 3300053158 | Bacteria | 2153 |
| 186 | Ga0500636_0084151 | 3300053177 | Bacteria | 1829 |
| 187 | Ga0500625_000296 | 3300053729 | Bacteria | 12207 |
| 188 | Ga0500599_003665 | 3300053736 | Bacteria | 1884 |
| 189 | Ga0500661_005046 | 3300055283 | Bacteria | 2475 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005436 | Ga0070713_100019754 | Ga0070713_1000197542 | 228 |
| 2 | 3300006028 | Ga0070717_10019658 | Ga0070717_100196583 | 228 |
| 3 | 3300025928 | Ga0207700_10026909 | Ga0207700_100269092 | 228 |
| 4 | 3300048929 | Ga0496126_0000069 | Ga0496126_0000069_139026_139826 | 231 |
| 5 | 3300025294 | Ga0209025_1072323 | Ga0209025_10723232 | 233 |
| 6 | 3300048919 | Ga0496116_0000026 | Ga0496116_0000026_136819_137619 | 233 |
| 7 | 3300045976 | Ga0466967_0913573 | Ga0466967_0913573_38_838 | 235 |
| 8 | 3300053078 | Ga0495612_0065691 | Ga0495612_0065691_350_1150 | 236 |
| 9 | 3300048918 | Ga0496115_0102852 | Ga0496115_0102852_840_1640 | 237 |
| 10 | 3300048929 | Ga0496126_0219340 | Ga0496126_0219340_53_853 | 238 |
| 11 | 3300005548 | Ga0070665_100766803 | Ga0070665_1007668031 | 239 |
| 12 | 3300005616 | Ga0068852_100614769 | Ga0068852_1006147692 | 239 |
| 13 | 3300009545 | Ga0105237_10075078 | Ga0105237_100750783 | 239 |
| 14 | 3300009551 | Ga0105238_10105826 | Ga0105238_101058263 | 239 |
| 15 | 3300010375 | Ga0105239_10246251 | Ga0105239_102462511 | 239 |
| 16 | 3300025917 | Ga0207660_10002761 | Ga0207660_100027617 | 239 |
| 17 | 3300026041 | Ga0207639_10096111 | Ga0207639_100961113 | 239 |
| 18 | 3300026142 | Ga0207698_10520643 | Ga0207698_105206431 | 239 |
| 19 | 3300028379 | Ga0268266_10515157 | Ga0268266_105151572 | 239 |
| 20 | 3300005329 | Ga0070683_100110770 | Ga0070683_1001107703 | 240 |
| 21 | 3300005366 | Ga0070659_100128624 | Ga0070659_1001286242 | 240 |
| 22 | 3300005535 | Ga0070684_100108570 | Ga0070684_1001085703 | 240 |
| 23 | 3300005577 | Ga0068857_100042465 | Ga0068857_1000424654 | 240 |
| 24 | 3300005834 | Ga0068851_10152351 | Ga0068851_101523512 | 240 |
| 25 | 3300005937 | Ga0081455_10131228 | Ga0081455_101312282 | 240 |
| 26 | 3300005983 | Ga0081540_1019035 | Ga0081540_10190353 | 240 |
| 27 | 3300009093 | Ga0105240_10041052 | Ga0105240_100410526 | 240 |
| 28 | 3300009545 | Ga0105237_10019726 | Ga0105237_100197265 | 240 |
| 29 | 3300009551 | Ga0105238_10003423 | Ga0105238_100034236 | 240 |
| 30 | 3300025912 | Ga0207707_10001221 | Ga0207707_1000122118 | 240 |
| 31 | 3300025914 | Ga0207671_10023287 | Ga0207671_100232875 | 240 |
| 32 | 3300025919 | Ga0207657_10001936 | Ga0207657_1000193610 | 240 |
| 33 | 3300025920 | Ga0207649_10029146 | Ga0207649_100291465 | 240 |
| 34 | 3300025921 | Ga0207652_10003582 | Ga0207652_100035827 | 240 |
| 35 | 3300025924 | Ga0207694_10012398 | Ga0207694_100123983 | 240 |
| 36 | 3300025932 | Ga0207690_10056070 | Ga0207690_100560703 | 240 |
| 37 | 3300025944 | Ga0207661_10026385 | Ga0207661_100263854 | 240 |
| 38 | 3300026116 | Ga0207674_10002416 | Ga0207674_100024163 | 240 |
| 39 | 3300037853 | Ga0436364_1339672 | Ga0436364_1339672_2291_3091 | 240 |
| 40 | 3300046512 | Ga0495610_0081845 | Ga0495610_0081845_253_1062 | 240 |
| 41 | 3300053729 | Ga0500625_000296 | Ga0500625_000296_7606_8418 | 241 |
| 42 | 3300006173 | Ga0070716_100374044 | Ga0070716_1003740441 | 242 |
| 43 | 3300053105 | Ga0500557_000067 | Ga0500557_000067_4071_4883 | 242 |
| 44 | 3300053130 | Ga0500642_0000242 | Ga0500642_0000242_4098_4910 | 242 |
| 45 | 3300003215 | JGI25153J46596_10002340 | JGI25153J46596_100023401 | 243 |
| 46 | 3300003794 | Ga0055531_10013055 | Ga0055531_100130553 | 243 |
| 47 | 3300025295 | Ga0209564_1014839 | Ga0209564_10148393 | 243 |
| 48 | 3300025297 | Ga0209758_1000075 | Ga0209758_1000075244 | 243 |
| 49 | 3300025299 | Ga0209256_1003531 | Ga0209256_10035319 | 243 |
| 50 | 3300025304 | Ga0209257_1002081 | Ga0209257_100208115 | 243 |
| 51 | 3300005262 | Ga0065165_1001291 | Ga0065165_100129115 | 244 |
| 52 | 3300025261 | Ga0209233_1002023 | Ga0209233_10020235 | 244 |
| 53 | 3300025297 | Ga0209758_1001651 | Ga0209758_100165110 | 244 |
| 54 | 3300046660 | Ga0495625_0034739 | Ga0495625_0034739_2622_3422 | 244 |
| 55 | 3300048929 | Ga0496126_0235631 | Ga0496126_0235631_696_1496 | 244 |
| 56 | 3300053736 | Ga0500599_003665 | Ga0500599_003665_46_846 | 244 |
| 57 | 3300055283 | Ga0500661_005046 | Ga0500661_005046_1589_2401 | 244 |
| 58 | 3300003794 | Ga0055531_10007017 | Ga0055531_100070177 | 245 |
| 59 | 3300005434 | Ga0070709_10004038 | Ga0070709_100040388 | 245 |
| 60 | 3300005436 | Ga0070713_100069844 | Ga0070713_1000698443 | 245 |
| 61 | 3300005437 | Ga0070710_10068560 | Ga0070710_100685603 | 245 |
| 62 | 3300028794 | Ga0307515_10183481 | Ga0307515_101834814 | 245 |
| 63 | 3300053086 | Ga0500578_0237567 | Ga0500578_0237567_116_949 | 245 |
| 64 | 3300053156 | Ga0500622_0002153 | Ga0500622_0002153_1867_2700 | 245 |
| 65 | 3300053177 | Ga0500636_0084151 | Ga0500636_0084151_35_868 | 245 |
| 66 | 3300033442 | Ga0315911_1000014 | Ga0315911_10000145 | 246 |
| 67 | 3300035086 | Ga0373934_0004755 | Ga0373934_0004755_1343_2143 | 246 |
| 68 | 3300036401 | Ga0373937_0072890 | Ga0373937_0072890_1929_2729 | 246 |
| 69 | 3300045976 | Ga0466967_0074903 | Ga0466967_0074903_548_1348 | 246 |
| 70 | 3300046543 | Ga0495645_0023583 | Ga0495645_0023583_247_1047 | 246 |
| 71 | 3300046663 | Ga0495635_0009848 | Ga0495635_0009848_5090_5890 | 246 |
| 72 | 3300046680 | Ga0495646_0065331 | Ga0495646_0065331_495_1295 | 246 |
| 73 | 3300047322 | Ga0495680_0004868 | Ga0495680_0004868_3396_4196 | 246 |
| 74 | 3300005548 | Ga0070665_100051605 | Ga0070665_1000516053 | 247 |
| 75 | 3300037466 | Ga0395898_0483058 | Ga0395898_0483058_156_956 | 247 |
| 76 | 3300046642 | Ga0495634_0018541 | Ga0495634_0018541_3412_4212 | 247 |
| 77 | 3300053142 | Ga0500577_0000032 | Ga0500577_0000032_28253_29053 | 247 |
| 78 | 3300005336 | Ga0070680_100034695 | Ga0070680_1000346955 | 248 |
| 79 | 3300005458 | Ga0070681_10154592 | Ga0070681_101545921 | 248 |
| 80 | 3300005530 | Ga0070679_100090014 | Ga0070679_1000900141 | 248 |
| 81 | 3300005539 | Ga0068853_100456891 | Ga0068853_1004568911 | 248 |
| 82 | 3300005563 | Ga0068855_100164471 | Ga0068855_1001644712 | 248 |
| 83 | 3300006028 | Ga0070717_10271734 | Ga0070717_102717342 | 248 |
| 84 | 3300006175 | Ga0070712_100061456 | Ga0070712_1000614562 | 248 |
| 85 | 3300009093 | Ga0105240_10238891 | Ga0105240_102388913 | 248 |
| 86 | 3300013104 | Ga0157370_10147835 | Ga0157370_101478352 | 248 |
| 87 | 3300025912 | Ga0207707_10132904 | Ga0207707_101329042 | 248 |
| 88 | 3300025915 | Ga0207693_10126691 | Ga0207693_101266913 | 248 |
| 89 | 3300025917 | Ga0207660_10076003 | Ga0207660_100760032 | 248 |
| 90 | 3300026078 | Ga0207702_10511695 | Ga0207702_105116951 | 248 |
| 91 | 3300035113 | Ga0373936_0065445 | Ga0373936_0065445_385_1185 | 248 |
| 92 | 3300049568 | Ga0501031_0214785 | Ga0501031_0214785_295_1110 | 250 |
| 93 | 3300025261 | Ga0209233_1001723 | Ga0209233_10017233 | 252 |
| 94 | 3300050516 | nmdc:mga0sz30_61375_c1 | nmdc:mga0sz30_61375_c1_292_1092 | 252 |
| 95 | 3300045049 | Ga0466959_0085146 | Ga0466959_0085146_1117_1917 | 253 |
| 96 | 3300045836 | Ga0466958_0269612 | Ga0466958_0269612_252_1052 | 253 |
| 97 | 3300005983 | Ga0081540_1020565 | Ga0081540_10205652 | 254 |
| 98 | 3300031507 | Ga0307509_10171117 | Ga0307509_101711173 | 255 |
| 99 | 3300035085 | Ga0373929_0010952 | Ga0373929_0010952_346_1146 | 255 |
| 100 | 3300046452 | Ga0495617_056745 | Ga0495617_056745_127_927 | 255 |
| 101 | 3300046455 | Ga0495603_0017522 | Ga0495603_0017522_66_866 | 255 |
| 102 | 3300046457 | Ga0495590_0058510 | Ga0495590_0058510_210_1010 | 255 |
| 103 | 3300046507 | Ga0495606_0229110 | Ga0495606_0229110_111_911 | 255 |
| 104 | 3300046519 | Ga0495632_0096812 | Ga0495632_0096812_89_889 | 255 |
| 105 | 3300046524 | Ga0495648_0001376 | Ga0495648_0001376_7981_8781 | 255 |
| 106 | 3300046537 | Ga0495598_0052329 | Ga0495598_0052329_293_1093 | 255 |
| 107 | 3300046615 | Ga0495656_0014064 | Ga0495656_0014064_1438_2238 | 255 |
| 108 | 3300046674 | Ga0495588_0052183 | Ga0495588_0052183_979_1779 | 255 |
| 109 | 3300046681 | Ga0495647_0040599 | Ga0495647_0040599_93_893 | 255 |
| 110 | 3300048911 | Ga0496108_0633416 | Ga0496108_0633416_24_824 | 255 |
| 111 | 3300053158 | Ga0500627_0034198 | Ga0500627_0034198_77_877 | 255 |
| 112 | 3300039450 | Ga0436363_0833744 | Ga0436363_0833744_417_1217 | 259 |
| 113 | 3300048924 | Ga0496121_0004951 | Ga0496121_0004951_5488_6288 | 259 |
| 114 | 3300014326 | Ga0157380_10225047 | Ga0157380_102250472 | 260 |
| 115 | 3300026121 | Ga0207683_10145323 | Ga0207683_101453232 | 260 |
| 116 | iso_pu_bacteria | 2775506925 | 2776373546 | 261 |
| 117 | iso_pu_bacteria | 2791355197 | 2793073144 | 261 |
| 118 | iso_pu_bacteria | 2863067949 | 2863068656 | 261 |
| 119 | iso_pu_bacteria | 2866552031 | 2866556207 | 261 |
| 120 | iso_pu_bacteria | 8056207758 | 8056215592 | 261 |
| 121 | iso_pu_bacteria | 8056689827 | 8056694731 | 261 |
| 122 | 3300037588 | Ga0316581_0108975 | Ga0316581_0108975_33_824 | 262 |
| 123 | iso_pu_bacteria | 2513237141 | 2513891827 | 262 |
| 124 | iso_pu_bacteria | 2643221568 | 2643853863 | 262 |
| 125 | iso_pu_bacteria | 2874620515 | 2874623949 | 262 |
| 126 | iso_pu_bacteria | 2904666416 | 2904673628 | 262 |
| 127 | 3300003215 | JGI25153J46596_10000519 | JGI25153J46596_100005195 | 265 |
| 128 | 3300005327 | Ga0070658_10194764 | Ga0070658_101947642 | 265 |
| 129 | 3300005329 | Ga0070683_100002204 | Ga0070683_1000022044 | 265 |
| 130 | 3300005435 | Ga0070714_100060407 | Ga0070714_1000604071 | 265 |
| 131 | 3300005937 | Ga0081455_10039987 | Ga0081455_100399872 | 265 |
| 132 | 3300005937 | Ga0081455_10117762 | Ga0081455_101177623 | 265 |
| 133 | 3300006028 | Ga0070717_10386731 | Ga0070717_103867312 | 265 |
| 134 | 3300006178 | Ga0075367_10206492 | Ga0075367_102064922 | 265 |
| 135 | 3300006237 | Ga0097621_100212572 | Ga0097621_1002125723 | 265 |
| 136 | 3300006871 | Ga0075434_100043048 | Ga0075434_1000430482 | 265 |
| 137 | 3300009094 | Ga0111539_10858145 | Ga0111539_108581451 | 265 |
| 138 | 3300009176 | Ga0105242_10373560 | Ga0105242_103735602 | 265 |
| 139 | 3300014969 | Ga0157376_10078769 | Ga0157376_100787693 | 265 |
| 140 | 3300025294 | Ga0209025_1001717 | Ga0209025_100171724 | 265 |
| 141 | 3300025297 | Ga0209758_1015426 | Ga0209758_10154261 | 265 |
| 142 | 3300025935 | Ga0207709_10141013 | Ga0207709_101410132 | 265 |
| 143 | 3300026095 | Ga0207676_10696859 | Ga0207676_106968591 | 265 |
| 144 | 3300035117 | Ga0373953_0091054 | Ga0373953_0091054_309_1109 | 265 |
| 145 | 3300035171 | Ga0373946_0026225 | Ga0373946_0026225_1209_2009 | 265 |
| 146 | 3300035171 | Ga0373946_0183710 | Ga0373946_0183710_58_855 | 265 |
| 147 | 3300035724 | Ga0373933_0163565 | Ga0373933_0163565_260_1060 | 265 |
| 148 | 3300035725 | Ga0373947_0082163 | Ga0373947_0082163_84_884 | 265 |
| 149 | 3300035725 | Ga0373947_0096813 | Ga0373947_0096813_52_849 | 265 |
| 150 | 3300036401 | Ga0373937_0345405 | Ga0373937_0345405_587_1387 | 265 |
| 151 | 3300037068 | Ga0373925_0131991 | Ga0373925_0131991_699_1499 | 265 |
| 152 | 3300037471 | Ga0395905_0118731 | Ga0395905_0118731_1179_1979 | 265 |
| 153 | 3300038443 | Ga0395901_0476901 | Ga0395901_0476901_409_1209 | 265 |
| 154 | 3300044712 | Ga0453684_0803380 | Ga0453684_0803380_176_982 | 265 |
| 155 | 3300045976 | Ga0466967_0005449 | Ga0466967_0005449_4746_5543 | 265 |
| 156 | 3300046459 | Ga0495629_0043281 | Ga0495629_0043281_1157_1957 | 265 |
| 157 | 3300046476 | Ga0495662_0077721 | Ga0495662_0077721_798_1598 | 265 |
| 158 | 3300046517 | Ga0495630_0071492 | Ga0495630_0071492_580_1380 | 265 |
| 159 | 3300046533 | Ga0495640_0083882 | Ga0495640_0083882_491_1291 | 265 |
| 160 | 3300046679 | Ga0495623_0220501 | Ga0495623_0220501_104_904 | 265 |
| 161 | 3300047319 | Ga0495674_0024377 | Ga0495674_0024377_1022_1822 | 265 |
| 162 | 3300047320 | Ga0495672_0094499 | Ga0495672_0094499_323_1123 | 265 |
| 163 | 3300048903 | Ga0496100_0015847 | Ga0496100_0015847_3552_4367 | 265 |
| 164 | 3300048907 | Ga0496104_0016795 | Ga0496104_0016795_1914_2729 | 265 |
| 165 | 3300048908 | Ga0496105_0115357 | Ga0496105_0115357_29_844 | 265 |
| 166 | 3300048911 | Ga0496108_0066888 | Ga0496108_0066888_718_1533 | 265 |
| 167 | 3300048918 | Ga0496115_0261629 | Ga0496115_0261629_406_1221 | 265 |
| 168 | 3300049581 | Ga0501047_0223544 | Ga0501047_0223544_505_1305 | 265 |
| 169 | 3300049586 | Ga0501070_0376979 | Ga0501070_0376979_163_963 | 265 |
| 170 | 3300049590 | Ga0501074_0018939 | Ga0501074_0018939_1643_2443 | 265 |
| 171 | 3300049742 | Ga0501080_0066311 | Ga0501080_0066311_2010_2810 | 265 |
| 172 | 3300050511 | nmdc:mga08y16_353320_c1 | nmdc:mga08y16_353320_c1_516_1319 | 265 |
| 173 | iso_pu_bacteria | 2917699015 | 2917701294 | 265 |
| 174 | 3300005366 | Ga0070659_100201088 | Ga0070659_1002010883 | 266 |
| 175 | 3300031733 | Ga0316577_10010209 | Ga0316577_100102093 | 266 |
| 176 | 3300036647 | Ga0316582_0020725 | Ga0316582_0020725_2995_3834 | 266 |
| 177 | 3300049575 | Ga0501039_0143534 | Ga0501039_0143534_604_1416 | 267 |
| 178 | 3300049587 | Ga0501071_0206589 | Ga0501071_0206589_164_976 | 267 |
| 179 | 3300049588 | Ga0501072_0111753 | Ga0501072_0111753_253_1065 | 267 |
| 180 | 3300049593 | Ga0501077_0237293 | Ga0501077_0237293_53_865 | 267 |
| 181 | 3300025291 | Ga0209675_1020803 | Ga0209675_10208032 | 269 |
| 182 | 3300049578 | Ga0501042_0052827 | Ga0501042_0052827_1478_2293 | 269 |
| 183 | 3300049582 | Ga0501048_0482046 | Ga0501048_0482046_59_874 | 269 |
| 184 | 3300049591 | Ga0501075_0138347 | Ga0501075_0138347_975_1790 | 269 |
| 185 | 3300049743 | Ga0501081_0414690 | Ga0501081_0414690_59_874 | 269 |
| 186 | 3300049824 | Ga0501045_0111228 | Ga0501045_0111228_29_844 | 269 |
| 187 | iso_pu_bacteria | 2643221736 | 2644744587 | 269 |
| 188 | iso_pu_bacteria | 8057529695 | 8057534874 | 269 |
| 189 | iso_pu_bacteria | 2818991467 | 2819717220 | 270 |
| 190 | iso_pu_bacteria | 2841911363 | 2841917135 | 272 |
| 191 | iso_pu_bacteria | 2841917233 | 2841922756 | 272 |
| 192 | 3300005262 | Ga0065165_1000139 | Ga0065165_100013981 | 273 |
| 193 | 3300025284 | Ga0209130_1000148 | Ga0209130_100014813 | 273 |
| 194 | 3300049575 | Ga0501039_0393176 | Ga0501039_0393176_240_1067 | 273 |
| 195 | 3300049592 | Ga0501076_0424640 | Ga0501076_0424640_153_1019 | 273 |
| 196 | 3300003187 | JGI25151J46595_10000135 | JGI25151J46595_1000013527 | 274 |
| 197 | 3300003771 | Ga0055526_1004186 | Ga0055526_10041866 | 274 |
| 198 | 3300003775 | Ga0055524_1000023 | Ga0055524_100002370 | 274 |
| 199 | 3300025291 | Ga0209675_1001362 | Ga0209675_10013627 | 274 |
| 200 | 3300025294 | Ga0209025_1000016 | Ga0209025_1000016512 | 274 |
| 201 | 3300025295 | Ga0209564_1000076 | Ga0209564_1000076147 | 274 |
| 202 | 3300025299 | Ga0209256_1000083 | Ga0209256_1000083147 | 274 |
| 203 | 3300048926 | Ga0496123_0085286 | Ga0496123_0085286_97_921 | 274 |
| 204 | 3300048926 | Ga0496123_0183702 | Ga0496123_0183702_210_1040 | 274 |
| 205 | 3300048929 | Ga0496126_0226167 | Ga0496126_0226167_481_1305 | 274 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1ub0-assembly1.cif.gz_A-2 | crystal structure analysis of phosphomethylpyrimidine kinase (thid) from thermus thermophilus hb8 | 0.9718 | 2 | 262 |
| 1ub0-assembly1.cif.gz_A-2 | crystal structure analysis of phosphomethylpyrimidine kinase (thid) from thermus thermophilus hb8 | 0.9641 | 2 | 262 |
| 7r8y-assembly1.cif.gz_A | ancestral protein ancthen of phosphomethylpyrimidine kinases family | 0.9605 | 1 | 245 |
| 1jxi-assembly1.cif.gz_B | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase from salmonella typhimurium complexed with 4-amino-5-hydroxymethyl-2-methylpyrimidine | 0.9528 | 1 | 266 |
| 1jxh-assembly1.cif.gz_B | 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase from salmonella typhimurium | 0.9506 | 1 | 266 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1ub0A00 | Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase | 0.9718 | 2 | 262 | 3.40.1190.20 |
| 1ub0A00 | Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase | 0.9641 | 2 | 262 | 3.40.1190.20 |
| af_P9WG77_1_265_3.40.1190.20 | Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase | 0.9617 | 1 | 261 | 3.40.1190.20 |
| af_O94266_18_315_3.40.1190.20 | Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase | 0.955 | 1 | 263 | 3.40.1190.20 |
| af_Q2FWG1_2_274_3.40.1190.20 | Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase | 0.9524 | 1 | 265 | 3.40.1190.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1E3H6L9-F1-model_v4 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (EC 2.7.1.49) | 0.9974 | 1 | 89 |
GO:0005829
GO:0008902 GO:0008972 GO:0009228 GO:0009229 |
| AF-A0A2V7X9H8-F1-model_v4 | Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.9918 | 2 | 80 |
GO:0005829
GO:0008902 GO:0008972 GO:0009228 |
| AF-A0A090R7B3-F1-model_v4 | deleted | 0.9907 | 2 | 104 |
|
| AF-A0A351CI63-F1-model_v4 | hydroxymethylpyrimidine kinase (EC 2.7.1.49) | 0.9898 | 4 | 106 |
GO:0005829
GO:0008902 GO:0008972 GO:0009228 GO:0009229 |
| AF-A0A2S5TY18-F1-model_v4 | deleted | 0.9891 | 1 | 266 |
|
Predicted Structure (AlphaFold2)
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