F314400

General Info

Members Datasets Scaffolds Average Seq Length
205 103 402 634

Family's Representative Sequence

Representative Sequence 3300049587|Ga0501071_0023056|Ga0501071_0023056_220_2262
Length 680
Sequence VQSPPRPKRRRTILLCGITPVIVTVCFAITRPASFARLDAGVYDTVLRSVSTRPISNRVVIVDVDERSLSEVGQWPWRRDVVGELIGRLRGHGASTVALDIVFAESDRYDELGEGVVRSSDIQRVAPDERLARTLRDGRVILGYAMTFDRDRPARTRCVLHPVGLALVHSPGETDSTPFFRATGAVCALPKLAQAAGASGFLNAAPDSDGILRRVPLLVELEGRVYPGLALAAVAAATGARHMALQVSTANDGTLSLDDRTIPVDGKSNLLLRYRGRKKTFPYVSAADVMSGQVSAETFRDKIVLVGTTALGTREVVATPLDTLFAGVEVQATVADNLLAQDFVSRSQFSTVLESQIVLGAGIALAVLILKTGLVAGVVGAAGLVLAFWCGSIWLLSANGLFVSPLFPTLGTMLSLATLTFGKFAVERRRAESADRDKASAQNLMVQALLSLTETRDAETGSHSRRTQEYARLLAEQLSTQPEFSGYLTTERIDLLSSLAPLHDIGKVGIPDHILNKPGALTPAELAEMRKHPVLGLEVILKAEKQAGVREDAIMAMAKDIVYTHHERWDGSGYPQGLRGQMIPIAGRVMALVDVYDATSTRTLYRPSRSHADTVDFIRSGRGTHFDPAVVDAFDRVAAQFEHVAAESDLAPAQPIATRIPARRDVPSAPLTAQTAAEQP

Samples

Sample ID Description Type Environment
1 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
66 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
67 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
68 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
69 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
70 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
71 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
74 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
83 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
84 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
85 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
86 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
87 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
88 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
98 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
99 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
100 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
101 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
102 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.88
Rhizosphere 95.12
Stem 0
Stem Tuber 0
Unclassified 1.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501071_0023056 3300049587 Bacteria 4344
2 Ga0065712_10087507 3300005290 Bacteria 2573
3 Ga0065715_10093161 3300005293 Bacteria 4773
4 Ga0070670_100026327 3300005331 Bacteria 5006
5 Ga0070666_10018374 3300005335 Bacteria 4494
6 Ga0070668_100071271 3300005347 Bacteria 2707
7 Ga0070669_100001838 3300005353 Bacteria 15305
8 Ga0070675_100000046 3300005354 Bacteria 76244
9 Ga0070675_100044578 3300005354 Bacteria 3627
10 Ga0070673_100015538 3300005364 Bacteria 5351
11 Ga0070705_100000639 3300005440 Bacteria 20034
12 Ga0070705_100004222 3300005440 Bacteria 7014
13 Ga0070705_100043104 3300005440 Bacteria 2584
14 Ga0070694_100002085 3300005444 Bacteria 11869
15 Ga0070694_100007695 3300005444 Bacteria 6577
16 Ga0070694_100013360 3300005444 Bacteria 5128
17 Ga0070694_100023621 3300005444 Bacteria 3957
18 Ga0070694_100024495 3300005444 Bacteria 3895
19 Ga0070707_100015645 3300005468 Bacteria 7120
20 Ga0070707_100035048 3300005468 Bacteria 4786
21 Ga0070707_100066876 3300005468 Bacteria 3455
22 Ga0070698_100008972 3300005471 Bacteria 10760
23 Ga0070698_100009134 3300005471 Bacteria 10641
24 Ga0070698_100025605 3300005471 Bacteria 6148
25 Ga0070699_100002016 3300005518 Bacteria 18359
26 Ga0070699_100002563 3300005518 Bacteria 16297
27 Ga0070699_100012099 3300005518 Bacteria 7447
28 Ga0070699_100012409 3300005518 Bacteria 7351
29 Ga0070699_100016661 3300005518 Bacteria 6308
30 Ga0070684_100026538 3300005535 Bacteria 4882
31 Ga0070697_100014435 3300005536 Bacteria 6203
32 Ga0070697_100053723 3300005536 Bacteria 3274
33 Ga0070697_100111877 3300005536 Bacteria 2276
34 Ga0070695_100000354 3300005545 Bacteria 23498
35 Ga0070696_100001821 3300005546 Bacteria 14005
36 Ga0070696_100002986 3300005546 Bacteria 11235
37 Ga0070696_100007616 3300005546 Bacteria 7234
38 Ga0070696_100011594 3300005546 Bacteria 5906
39 Ga0070696_100028555 3300005546 Bacteria 3807
40 Ga0070665_100068089 3300005548 Bacteria 3569
41 Ga0070704_100007576 3300005549 Bacteria 6468
42 Ga0070664_100007778 3300005564 Bacteria 8655
43 Ga0070702_100008412 3300005615 Bacteria 4996
44 Ga0068859_100038711 3300005617 Bacteria 4783
45 Ga0068861_100045082 3300005719 Unclassified 3318
46 Ga0068861_100048032 3300005719 Bacteria 3224
47 Ga0068858_100003784 3300005842 Bacteria 14958
48 Ga0068862_100005907 3300005844 Bacteria 10194
49 Ga0097621_100021503 3300006237 Bacteria 4992
50 Ga0068871_100022829 3300006358 Bacteria 4829
51 Ga0068871_100024919 3300006358 Bacteria 4646
52 Ga0068871_100067007 3300006358 Bacteria 2944
53 Ga0075428_100005857 3300006844 Bacteria 13654
54 Ga0075428_100012052 3300006844 Bacteria 9618
55 Ga0075428_100014526 3300006844 Bacteria 8747
56 Ga0075428_100025410 3300006844 Bacteria 6555
57 Ga0075428_100037084 3300006844 Bacteria 5368
58 Ga0075430_100006008 3300006846 Bacteria 10247
59 Ga0075430_100027894 3300006846 Bacteria 4796
60 Ga0075430_100034932 3300006846 Bacteria 4268
61 Ga0075430_100093964 3300006846 Bacteria 2507
62 Ga0075431_100012550 3300006847 Bacteria 8551
63 Ga0075431_100046268 3300006847 Bacteria 4486
64 Ga0075431_100119881 3300006847 Bacteria 2714
65 Ga0075433_10029804 3300006852 Bacteria 4652
66 Ga0075433_10031401 3300006852 Bacteria 4541
67 Ga0075433_10047001 3300006852 Bacteria 3754
68 Ga0075434_100000546 3300006871 Bacteria 28705
69 Ga0075434_100002468 3300006871 Bacteria 16280
70 Ga0075434_100020035 3300006871 Bacteria 6479
71 Ga0068865_100002559 3300006881 Bacteria 10790
72 Ga0075436_100002519 3300006914 Bacteria 12602
73 Ga0075436_100022252 3300006914 Bacteria 4353
74 Ga0097620_100038712 3300006931 Bacteria 4783
75 Ga0075435_100000277 3300007076 Bacteria 31844
76 Ga0075435_100009062 3300007076 Bacteria 7179
77 Ga0075435_100009871 3300007076 Bacteria 6947
78 Ga0075435_100018723 3300007076 Bacteria 5274
79 Ga0111539_10001050 3300009094 Bacteria 36366
80 Ga0111539_10001639 3300009094 Bacteria 29898
81 Ga0111539_10003583 3300009094 Bacteria 20465
82 Ga0111539_10005489 3300009094 Bacteria 16401
83 Ga0111539_10017664 3300009094 Bacteria 8830
84 Ga0111539_10022518 3300009094 Bacteria 7741
85 Ga0114129_10006525 3300009147 Bacteria 16555
86 Ga0114129_10007304 3300009147 Bacteria 15734
87 Ga0114129_10008350 3300009147 Bacteria 14762
88 Ga0114129_10012938 3300009147 Bacteria 11875
89 Ga0114129_10013465 3300009147 Bacteria 11653
90 Ga0114129_10018954 3300009147 Bacteria 9801
91 Ga0114129_10031278 3300009147 Bacteria 7526
92 Ga0114129_10058589 3300009147 Bacteria 5387
93 Ga0114129_10066847 3300009147 Bacteria 5013
94 Ga0114129_10279168 3300009147 Bacteria 2232
95 Ga0105243_10043304 3300009148 Bacteria 3528
96 Ga0105242_10003052 3300009176 Bacteria 13085
97 Ga0105248_10062023 3300009177 Bacteria 4198
98 Ga0105248_10073083 3300009177 Bacteria 3854
99 Ga0105246_10009932 3300011119 Bacteria 5874
100 Ga0163163_10009927 3300014325 Bacteria 8536
101 Ga0163163_10057686 3300014325 Bacteria 3839
102 Ga0157376_10027812 3300014969 Bacteria 4487
103 Ga0157376_10035846 3300014969 Bacteria 4014
104 Ga0207681_10010962 3300025923 Bacteria 5566
105 Ga0207650_10023706 3300025925 Bacteria 4357
106 Ga0207650_10031706 3300025925 Bacteria 3818
107 Ga0207659_10000183 3300025926 Bacteria 37254
108 Ga0207686_10030343 3300025934 Bacteria 3199
109 Ga0207709_10048244 3300025935 Bacteria 2594
110 Ga0207711_10043335 3300025941 Bacteria 3837
111 Ga0207711_10077726 3300025941 Bacteria 2894
112 Ga0207661_10007588 3300025944 Bacteria 7712
113 Ga0207679_10006873 3300025945 Bacteria 7212
114 Ga0207651_10011076 3300025960 Bacteria 5030
115 Ga0207703_10059242 3300026035 Bacteria 3127
116 Ga0207708_10041622 3300026075 Bacteria 3502
117 Ga0207708_10053144 3300026075 Bacteria 3086
118 Ga0207675_100067870 3300026118 Bacteria 3334
119 Ga0207428_10001901 3300027907 Bacteria 21151
120 Ga0207428_10012462 3300027907 Bacteria 7469
121 Ga0207428_10054746 3300027907 Bacteria 3176
122 Ga0268264_10123850 3300028381 Bacteria 2282
123 Ga0307405_10024908 3300031731 Bacteria 3427
124 Ga0307412_10012681 3300031911 Bacteria 4919
125 Ga0307412_10025176 3300031911 Bacteria 3682
126 Ga0307415_100011262 3300032126 Bacteria 5110
127 Ga0373925_0021840 3300037068 Bacteria 4666
128 Ga0495608_0047247 3300046511 Bacteria 2862
129 Ga0495642_0005665 3300046528 Bacteria 4795
130 Ga0495621_0021496 3300046539 Bacteria 2127
131 Ga0495647_0003132 3300046681 Bacteria 5293
132 Ga0495636_0037225 3300047318 Bacteria 2009
133 Ga0495677_0016902 3300047445 Bacteria 2646
134 Ga0496100_0026092 3300048903 Bacteria 3579
135 Ga0496101_0000227 3300048904 Bacteria 42022
136 Ga0496104_0009514 3300048907 Bacteria 8652
137 Ga0496104_0060807 3300048907 Bacteria 3579
138 Ga0496109_0030802 3300048912 Bacteria 4809
139 Ga0496110_0006732 3300048913 Bacteria 9135
140 Ga0496110_0132699 3300048913 Bacteria 2250
141 Ga0496112_0007897 3300048915 Bacteria 9479
142 Ga0496114_0000552 3300048917 Bacteria 27710
143 Ga0496115_0084124 3300048918 Bacteria 2594
144 Ga0501041_0052226 3300049577 Bacteria 2492
145 Ga0501042_0011805 3300049578 Bacteria 5902
146 Ga0501046_0051808 3300049580 Bacteria 3238
147 Ga0501048_0027104 3300049582 Bacteria 4168
148 Ga0501071_0064469 3300049587 Bacteria 2658
149 Ga0501072_0041836 3300049588 Bacteria 3599
150 Ga0501075_0036625 3300049591 Bacteria 3662
151 Ga0501075_0056129 3300049591 Bacteria 2965
152 Ga0501077_0056557 3300049593 Bacteria 2490
153 Ga0501079_0005001 3300049741 Bacteria 9830
154 Ga0501080_0094146 3300049742 Unclassified 2782
155 Ga0501081_0003410 3300049743 Bacteria 10128
156 Ga0501081_0021665 3300049743 Bacteria 4290
157 Ga0501045_0039011 3300049824 Bacteria 3456
158 Ga0501045_0041945 3300049824 Bacteria 3330
159 nmdc:mga05p37_191602_c1 3300050507 Bacteria 2482
160 nmdc:mga05p37_227023_c1 3300050507 Bacteria 2251
161 nmdc:mga05p37_2395_c1 3300050507 Bacteria 21805
162 nmdc:mga05p37_25562_c1 3300050507 Bacteria 7183
163 nmdc:mga05p37_35907_c1 3300050507 Bacteria 6082
164 nmdc:mga05p37_4701_c1 3300050507 Bacteria 15948
165 nmdc:mga05p37_67028_c1 3300050507 Bacteria 4416
166 nmdc:mga05p37_83662_c1 3300050507 Bacteria 3931
167 nmdc:mga09592_58199_c1 3300050508 Bacteria 3268
168 nmdc:mga09592_6597_c1 3300050508 Bacteria 9452
169 nmdc:mga09592_8841_c1 3300050508 Bacteria 8195
170 nmdc:mga0qj67_62731_c1 3300050509 Unclassified 2954
171 nmdc:mga0qj67_70658_c1 3300050509 Bacteria 2785
172 nmdc:mga0qj67_75604_c1 3300050509 Bacteria 2692
173 nmdc:mga0qj67_9473_c1 3300050509 Bacteria 7249
174 nmdc:mga06r32_103927_c1 3300050510 Bacteria 2789
175 nmdc:mga06r32_11504_c1 3300050510 Bacteria 7970
176 nmdc:mga06r32_136070_c1 3300050510 Unclassified 2432
177 nmdc:mga06r32_16167_c1 3300050510 Bacteria 2567
178 nmdc:mga06r32_39051_c1 3300050510 Bacteria 4503
179 nmdc:mga08y16_10765_c1 3300050511 Bacteria 9598
180 nmdc:mga08y16_154731_c1 3300050511 Bacteria 2383
181 nmdc:mga08y16_41618_c1 3300050511 Bacteria 4813
182 nmdc:mga08y16_54599_c1 3300050511 Bacteria 3837
183 nmdc:mga08y16_921_c1 3300050511 Bacteria 28527
184 nmdc:mga0n895_78_c1 3300050512 Bacteria 55918
185 nmdc:mga0rr50_14235_c1 3300050513 Bacteria 5211
186 nmdc:mga0rr50_6_c1 3300050513 Bacteria 310626
187 nmdc:mga08x19_331_c1 3300050514 Bacteria 34130
188 nmdc:mga08x19_35284_c1 3300050514 Bacteria 3164
189 nmdc:mga08x19_9605_c1 3300050514 Bacteria 5791
190 nmdc:mga0a205_12919_c2 3300050515 Bacteria 4672
191 nmdc:mga0a205_20198_c1 3300050515 Bacteria 6283
192 nmdc:mga0a205_23843_c2 3300050515 Bacteria 5410
193 nmdc:mga0a205_38937_c1 3300050515 Bacteria 4575
194 Ga0501084_0022134 3300054114 Bacteria 5303
195 Ga0590071_000238 3300059421 Bacteria 16092
196 Ga0590074_003532 3300059423 Bacteria 2588
197 Ga0590075_001043 3300059424 Bacteria 7149
198 Ga0590075_001697 3300059424 Bacteria 5417
199 Ga0590077_000780 3300059426 Bacteria 8310
200 Ga0590077_002734 3300059426 Bacteria 3715
201 Ga0501082_0048227 3300060353 Bacteria 3671
202 Ga0501071_0023056
203 Ga0065712_10087507
204 Ga0065715_10093161
205 Ga0070670_100026327
206 Ga0070666_10018374
207 Ga0070668_100071271
208 Ga0070669_100001838
209 Ga0070675_100000046
210 Ga0070675_100044578
211 Ga0070673_100015538
212 Ga0070705_100000639
213 Ga0070705_100004222
214 Ga0070705_100043104
215 Ga0070694_100002085
216 Ga0070694_100007695
217 Ga0070694_100013360
218 Ga0070694_100023621
219 Ga0070694_100024495
220 Ga0070707_100015645
221 Ga0070707_100035048
222 Ga0070707_100066876
223 Ga0070698_100008972
224 Ga0070698_100009134
225 Ga0070698_100025605
226 Ga0070699_100002016
227 Ga0070699_100002563
228 Ga0070699_100012099
229 Ga0070699_100012409
230 Ga0070699_100016661
231 Ga0070684_100026538
232 Ga0070697_100014435
233 Ga0070697_100053723
234 Ga0070697_100111877
235 Ga0070695_100000354
236 Ga0070696_100001821
237 Ga0070696_100002986
238 Ga0070696_100007616
239 Ga0070696_100011594
240 Ga0070696_100028555
241 Ga0070665_100068089
242 Ga0070704_100007576
243 Ga0070664_100007778
244 Ga0070702_100008412
245 Ga0068859_100038711
246 Ga0068861_100045082
247 Ga0068861_100048032
248 Ga0068858_100003784
249 Ga0068862_100005907
250 Ga0097621_100021503
251 Ga0068871_100022829
252 Ga0068871_100024919
253 Ga0068871_100067007
254 Ga0075428_100005857
255 Ga0075428_100012052
256 Ga0075428_100014526
257 Ga0075428_100025410
258 Ga0075428_100037084
259 Ga0075430_100006008
260 Ga0075430_100027894
261 Ga0075430_100034932
262 Ga0075430_100093964
263 Ga0075431_100012550
264 Ga0075431_100046268
265 Ga0075431_100119881
266 Ga0075433_10029804
267 Ga0075433_10031401
268 Ga0075433_10047001
269 Ga0075434_100000546
270 Ga0075434_100002468
271 Ga0075434_100020035
272 Ga0068865_100002559
273 Ga0075436_100002519
274 Ga0075436_100022252
275 Ga0097620_100038712
276 Ga0075435_100000277
277 Ga0075435_100009062
278 Ga0075435_100009871
279 Ga0075435_100018723
280 Ga0111539_10001050
281 Ga0111539_10001639
282 Ga0111539_10003583
283 Ga0111539_10005489
284 Ga0111539_10017664
285 Ga0111539_10022518
286 Ga0114129_10006525
287 Ga0114129_10007304
288 Ga0114129_10008350
289 Ga0114129_10012938
290 Ga0114129_10013465
291 Ga0114129_10018954
292 Ga0114129_10031278
293 Ga0114129_10058589
294 Ga0114129_10066847
295 Ga0114129_10279168
296 Ga0105243_10043304
297 Ga0105242_10003052
298 Ga0105248_10062023
299 Ga0105248_10073083
300 Ga0105246_10009932
301 Ga0163163_10009927
302 Ga0163163_10057686
303 Ga0157376_10027812
304 Ga0157376_10035846
305 Ga0207681_10010962
306 Ga0207650_10023706
307 Ga0207650_10031706
308 Ga0207659_10000183
309 Ga0207686_10030343
310 Ga0207709_10048244
311 Ga0207711_10043335
312 Ga0207711_10077726
313 Ga0207661_10007588
314 Ga0207679_10006873
315 Ga0207651_10011076
316 Ga0207703_10059242
317 Ga0207708_10041622
318 Ga0207708_10053144
319 Ga0207675_100067870
320 Ga0207428_10001901
321 Ga0207428_10012462
322 Ga0207428_10054746
323 Ga0268264_10123850
324 Ga0307405_10024908
325 Ga0307412_10012681
326 Ga0307412_10025176
327 Ga0307415_100011262
328 Ga0373925_0021840
329 Ga0495608_0047247
330 Ga0495642_0005665
331 Ga0495621_0021496
332 Ga0495647_0003132
333 Ga0495636_0037225
334 Ga0495677_0016902
335 Ga0496100_0026092
336 Ga0496101_0000227
337 Ga0496104_0009514
338 Ga0496104_0060807
339 Ga0496109_0030802
340 Ga0496110_0006732
341 Ga0496110_0132699
342 Ga0496112_0007897
343 Ga0496114_0000552
344 Ga0496115_0084124
345 Ga0501041_0052226
346 Ga0501042_0011805
347 Ga0501046_0051808
348 Ga0501048_0027104
349 Ga0501071_0064469
350 Ga0501072_0041836
351 Ga0501075_0036625
352 Ga0501075_0056129
353 Ga0501077_0056557
354 Ga0501079_0005001
355 Ga0501080_0094146
356 Ga0501081_0003410
357 Ga0501081_0021665
358 Ga0501045_0039011
359 Ga0501045_0041945
360 nmdc:mga05p37_191602_c1
361 nmdc:mga05p37_227023_c1
362 nmdc:mga05p37_2395_c1
363 nmdc:mga05p37_25562_c1
364 nmdc:mga05p37_35907_c1
365 nmdc:mga05p37_4701_c1
366 nmdc:mga05p37_67028_c1
367 nmdc:mga05p37_83662_c1
368 nmdc:mga09592_58199_c1
369 nmdc:mga09592_6597_c1
370 nmdc:mga09592_8841_c1
371 nmdc:mga0qj67_62731_c1
372 nmdc:mga0qj67_70658_c1
373 nmdc:mga0qj67_75604_c1
374 nmdc:mga0qj67_9473_c1
375 nmdc:mga06r32_103927_c1
376 nmdc:mga06r32_11504_c1
377 nmdc:mga06r32_136070_c1
378 nmdc:mga06r32_16167_c1
379 nmdc:mga06r32_39051_c1
380 nmdc:mga08y16_10765_c1
381 nmdc:mga08y16_154731_c1
382 nmdc:mga08y16_41618_c1
383 nmdc:mga08y16_54599_c1
384 nmdc:mga08y16_921_c1
385 nmdc:mga0n895_78_c1
386 nmdc:mga0rr50_14235_c1
387 nmdc:mga0rr50_6_c1
388 nmdc:mga08x19_331_c1
389 nmdc:mga08x19_35284_c1
390 nmdc:mga08x19_9605_c1
391 nmdc:mga0a205_12919_c2
392 nmdc:mga0a205_20198_c1
393 nmdc:mga0a205_23843_c2
394 nmdc:mga0a205_38937_c1
395 Ga0501084_0022134
396 Ga0590071_000238
397 Ga0590074_003532
398 Ga0590075_001043
399 Ga0590075_001697
400 Ga0590077_000780
401 Ga0590077_002734
402 Ga0501082_0048227

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01966

HD

HD domain

460

599

0.95

PF13487

HD_5

HD domain

447

630

0.86

PF05226

CHASE2

CHASE2 domain

21

372

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r8z-assembly1.cif.gz_B crystal structure of pa4781 hd-gyp domain from pseudomonas aeruginosa at 2.2a resolution showing a bi-metallic ni ion center 0.8777 442 654
4r8z-assembly1.cif.gz_B crystal structure of pa4781 hd-gyp domain from pseudomonas aeruginosa at 2.2a resolution showing a bi-metallic ni ion center 0.8555 442 654
4mdz-assembly1.cif.gz_A crystal structure of a hd-gyp domain (a cyclic-di-gmp phosphodiesterase) containing a tri-nuclear metal centre 0.8269 442 654
6pbz-assembly1.cif.gz_D crystal structure of escherichia coli gppa 0.6201 471 604
6pbz-assembly1.cif.gz_A crystal structure of escherichia coli gppa 0.6153 471 604
ID Description Score Start End Superfamily
4r8zB00 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.8777 442 654 1.10.3210.10
4me4A02 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.8569 451 653 1.10.3210.10
4r8zB00 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.8555 442 654 1.10.3210.10
4me4A02 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.8326 451 653 1.10.3210.10
af_Q02931_412_695_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7558 261 284 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A212JP37-F1-model_v4 Cyclic di-GMP phosphodiesterase response regulator RpfG (EC 3.1.4.52) 0.9618 495 653 GO:0071111
AF-A0A1C6I2N6-F1-model_v4 Cyclic di-GMP phosphodiesterase response regulator RpfG (EC 3.1.4.52) 0.9528 535 656 GO:0071111
AF-A0A1G3JG18-F1-model_v4 HD-GYP domain-containing protein 0.9508 485 653 GO:0008081
AF-A0A1C6I2N6-F1-model_v4 Cyclic di-GMP phosphodiesterase response regulator RpfG (EC 3.1.4.52) 0.9452 535 656 GO:0071111
AF-A0A3B9I849-F1-model_v4 HD-GYP domain-containing protein 0.9404 495 643

Map