F314231

General Info

Members Datasets Scaffolds Average Seq Length
205 141 410 322

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0075573|Ga0451576_0075573_2233_3294
Length 353
Sequence VKSTSVTAVKNHPQKSASLNLMSVYIVPQSRVPDLLPMRECIDLMANVLRTLARGDAVLPLRSLLRTPDGNGLLGLMPAMLGEPPCMGIKVISVYFNNEAAGLDSHQGAVLLFEPEHGSLVAMIDASSITAIRTAAVSGAATRALAREDAGDLAMIGAGVQAITHLEAMLCVRKLRRVRVWSLHADKVRAFTERESKRHGIRIEAMASAREAVEGADIVCTTTGAKEPVVNGDWLAPGAHINAVGACFPNTRELDTKAVVRSRLVVDRRESALNEAGDFLIPRKEGAIGDDHIVGELGDVLLGKVPGRRSPDEITLFKSLGIAVEDLAAAHLIWSKARAGGEPAIDFGGHRIG

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
92 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
93 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
94 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
95 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
101 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
102 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
135 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
136 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
141 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.51
Metatranscriptomes 0
Isolates 0.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.49
Nodule 0
Rhizoplane 0.49
Rhizosphere 98.05
Stem 0
Stem Tuber 0
Unclassified 12.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0075573 3300045051 Bacteria 3506
2 JGI25406J46586_10009936 3300003203 Bacteria 4247
3 Ga0070683_100002301 3300005329 Bacteria 15144
4 Ga0070683_100038702 3300005329 Bacteria 4373
5 Ga0070683_100194832 3300005329 Bacteria 1924
6 Ga0070690_100008079 3300005330 Bacteria 6043
7 Ga0070690_100147788 3300005330 Unclassified 1601
8 Ga0068869_100073872 3300005334 Unclassified 2530
9 Ga0068869_100083067 3300005334 Bacteria 2395
10 Ga0068869_100189415 3300005334 Bacteria 1617
11 Ga0068869_100377429 3300005334 Bacteria 1161
12 Ga0070666_10000257 3300005335 Bacteria 35224
13 Ga0070666_10015372 3300005335 Bacteria 4882
14 Ga0070666_10110012 3300005335 Unclassified 1905
15 Ga0070682_100000039 3300005337 Bacteria 144400
16 Ga0068868_100038151 3300005338 Unclassified 3728
17 Ga0068868_100180616 3300005338 Bacteria 1750
18 Ga0070660_100085963 3300005339 Bacteria 2474
19 Ga0070691_10127548 3300005341 Bacteria 1286
20 Ga0070669_100000592 3300005353 Bacteria 26958
21 Ga0070669_100048713 3300005353 Bacteria 3093
22 Ga0070669_100161957 3300005353 Bacteria 1739
23 Ga0070675_100222046 3300005354 Unclassified 1646
24 Ga0070673_100138203 3300005364 Bacteria 2053
25 Ga0070688_100002745 3300005365 Bacteria 8942
26 Ga0070688_100262129 3300005365 Bacteria 1235
27 Ga0070659_100002732 3300005366 Bacteria 12552
28 Ga0070667_100022191 3300005367 Bacteria 5267
29 Ga0070667_100025193 3300005367 Bacteria 4945
30 Ga0070700_100009962 3300005441 Bacteria 5231
31 Ga0070678_100022485 3300005456 Unclassified 4180
32 Ga0070662_100093554 3300005457 Unclassified 2261
33 Ga0070706_100086212 3300005467 Bacteria 2910
34 Ga0070707_100002949 3300005468 Bacteria 16155
35 Ga0070698_100042339 3300005471 Bacteria 4670
36 Ga0070698_100046756 3300005471 Bacteria 4425
37 Ga0070699_100000814 3300005518 Bacteria 28861
38 Ga0070684_100004343 3300005535 Bacteria 10776
39 Ga0070686_100041626 3300005544 Bacteria 2873
40 Ga0070686_100258891 3300005544 Bacteria 1274
41 Ga0070696_100001106 3300005546 Bacteria 17448
42 Ga0070696_100395565 3300005546 Unclassified 1080
43 Ga0070693_100059721 3300005547 Bacteria 2211
44 Ga0070693_100164674 3300005547 Bacteria 1415
45 Ga0068855_100020595 3300005563 Bacteria 7909
46 Ga0070664_100004774 3300005564 Bacteria 10857
47 Ga0068857_100008580 3300005577 Bacteria 8841
48 Ga0068857_100012992 3300005577 Bacteria 7256
49 Ga0068854_100014956 3300005578 Bacteria 5127
50 Ga0068852_100115944 3300005616 Bacteria 2443
51 Ga0068852_100276903 3300005616 Bacteria 1616
52 Ga0068859_100005262 3300005617 Bacteria 13149
53 Ga0068859_100029236 3300005617 Bacteria 5530
54 Ga0068859_100039540 3300005617 Bacteria 4732
55 Ga0068859_100500530 3300005617 Bacteria 1310
56 Ga0068858_100041158 3300005842 Bacteria 4285
57 Ga0068858_100359322 3300005842 Unclassified 1396
58 Ga0068862_100064769 3300005844 Unclassified 3147
59 Ga0081539_10000117 3300005985 Bacteria 185868
60 Ga0070717_10078920 3300006028 Bacteria 2760
61 Ga0097621_100129035 3300006237 Bacteria 2150
62 Ga0075428_100013915 3300006844 Bacteria 8960
63 Ga0075428_100061696 3300006844 Bacteria 4105
64 Ga0075430_100047143 3300006846 Bacteria 3638
65 Ga0075433_10001674 3300006852 Bacteria 16509
66 Ga0075434_100006019 3300006871 Bacteria 11097
67 Ga0075434_100023947 3300006871 Bacteria 5960
68 Ga0075434_100281985 3300006871 Bacteria 1681
69 Ga0075434_100377282 3300006871 Bacteria 1439
70 Ga0075429_100121339 3300006880 Bacteria 2285
71 Ga0075436_100002178 3300006914 Bacteria 13504
72 Ga0075436_100003927 3300006914 Bacteria 10190
73 Ga0075436_100006197 3300006914 Bacteria 8201
74 Ga0097620_100005262 3300006931 Bacteria 13149
75 Ga0097620_100029237 3300006931 Bacteria 5530
76 Ga0097620_100039536 3300006931 Bacteria 4732
77 Ga0097620_100500491 3300006931 Bacteria 1310
78 Ga0075435_100000619 3300007076 Bacteria 21836
79 Ga0075435_100047427 3300007076 Bacteria 3450
80 Ga0105240_10006834 3300009093 Bacteria 16685
81 Ga0111539_10132965 3300009094 Unclassified 2913
82 Ga0111539_10440834 3300009094 Unclassified 1516
83 Ga0111539_10718697 3300009094 Archaea 1163
84 Ga0105245_10083944 3300009098 Bacteria 2916
85 Ga0105242_10135467 3300009176 Bacteria 2131
86 Ga0105242_10188881 3300009176 Bacteria 1823
87 Ga0105249_10045318 3300009553 Bacteria 3999
88 Ga0105249_10119026 3300009553 Bacteria 2508
89 Ga0157373_10024241 3300013100 Bacteria 4397
90 Ga0157370_10015484 3300013104 Bacteria 7752
91 Ga0157374_10003134 3300013296 Bacteria 13893
92 Ga0157374_10020143 3300013296 Bacteria 5914
93 Ga0157378_10302060 3300013297 Bacteria 1549
94 Ga0157378_10369573 3300013297 Unclassified 1406
95 Ga0163162_10002494 3300013306 Bacteria 17393
96 Ga0157372_10050462 3300013307 Bacteria 4628
97 Ga0157372_10216143 3300013307 Bacteria 2222
98 Ga0157375_10046225 3300013308 Bacteria 4242
99 Ga0157375_10131790 3300013308 Bacteria 2620
100 Ga0163163_10111889 3300014325 Bacteria 2759
101 Ga0163163_10118054 3300014325 Unclassified 2685
102 Ga0157379_10132249 3300014968 Bacteria 2246
103 Ga0157376_10013320 3300014969 Bacteria 6134
104 Ga0163161_10080715 3300017792 Bacteria 2394
105 Ga0207653_10001547 3300025885 Bacteria 7444
106 Ga0207680_10000391 3300025903 Bacteria 20814
107 Ga0207680_10063561 3300025903 Bacteria 2259
108 Ga0207684_10208624 3300025910 Bacteria 1685
109 Ga0207695_10000089 3300025913 Bacteria 273463
110 Ga0207646_10017684 3300025922 Bacteria 6662
111 Ga0207681_10000021 3300025923 Bacteria 236982
112 Ga0207681_10007868 3300025923 Bacteria 6524
113 Ga0207687_10099878 3300025927 Bacteria 2133
114 Ga0207706_10263719 3300025933 Bacteria 1504
115 Ga0207670_10048278 3300025936 Bacteria 2840
116 Ga0207670_10085886 3300025936 Bacteria 2212
117 Ga0207670_10112263 3300025936 Bacteria 1966
118 Ga0207665_10029440 3300025939 Bacteria 3630
119 Ga0207689_10019850 3300025942 Bacteria 5662
120 Ga0207689_10087245 3300025942 Unclassified 2564
121 Ga0207689_10104693 3300025942 Bacteria 2325
122 Ga0207661_10004770 3300025944 Bacteria 9492
123 Ga0207661_10020545 3300025944 Bacteria 4937
124 Ga0207679_10006055 3300025945 Bacteria 7625
125 Ga0207667_10000211 3300025949 Bacteria 82245
126 Ga0207651_10110553 3300025960 Bacteria 2062
127 Ga0207712_10069590 3300025961 Bacteria 2525
128 Ga0207658_10193653 3300025986 Unclassified 1692
129 Ga0207677_10313878 3300026023 Bacteria 1300
130 Ga0207703_10326988 3300026035 Bacteria 1405
131 Ga0207708_10029726 3300026075 Bacteria 4142
132 Ga0207641_10183954 3300026088 Bacteria 1916
133 Ga0207648_10030066 3300026089 Bacteria 4815
134 Ga0207648_10283739 3300026089 Bacteria 1481
135 Ga0207648_10630315 3300026089 Unclassified 990
136 Ga0207674_10042092 3300026116 Bacteria 4720
137 Ga0207675_100046035 3300026118 Bacteria 4075
138 Ga0207683_10030626 3300026121 Unclassified 4663
139 Ga0207698_10058173 3300026142 Bacteria 2995
140 Ga0207698_10173092 3300026142 Bacteria 1903
141 Ga0268265_10052602 3300028380 Unclassified 3081
142 Ga0307509_10000177 3300031507 Bacteria 100248
143 Ga0316576_10145745 3300031727 Unclassified 1783
144 Ga0316576_10175310 3300031727 Bacteria 1618
145 Ga0316578_10024371 3300031728 Unclassified 3395
146 Ga0373956_0061528 3300035119 Bacteria 1701
147 Ga0373961_0000010 3300035241 Bacteria 129237
148 Ga0373933_0246610 3300035724 Bacteria 1150
149 Ga0373947_0202198 3300035725 Unclassified 1300
150 Ga0373937_0145729 3300036401 Bacteria 2217
151 Ga0316584_0154094 3300036712 Bacteria 1709
152 Ga0373925_0544530 3300037068 Unclassified 954
153 Ga0436362_0769016 3300039453 Bacteria 4034
154 Ga0466965_0101076 3300044683 Bacteria 1475
155 Ga0466968_0020947 3300044735 Bacteria 2644
156 Ga0466957_0236286 3300044842 Bacteria 1211
157 Ga0466959_0051210 3300045049 Bacteria 3030
158 Ga0451576_0021620 3300045051 Bacteria 6990
159 Ga0495629_0003232 3300046459 Bacteria 12344
160 Ga0495629_0160313 3300046459 Bacteria 1563
161 Ga0495580_0404003 3300046472 Bacteria 921
162 Ga0495587_0030880 3300046536 Bacteria 3248
163 Ga0495667_0076278 3300046559 Bacteria 2181
164 Ga0495634_0040589 3300046642 Unclassified 3164
165 Ga0495647_0014438 3300046681 Bacteria 2752
166 Ga0495613_0040494 3300046689 Bacteria 3452
167 Ga0495613_0196867 3300046689 Bacteria 1422
168 Ga0495581_0001036 3300047315 Bacteria 15039
169 Ga0495676_0196811 3300047321 Bacteria 1403
170 Ga0495680_0004183 3300047322 Bacteria 13864
171 Ga0495614_0015960 3300048089 Bacteria 3271
172 Ga0496110_0079143 3300048913 Bacteria 2926
173 Ga0501032_0173026 3300049569 Bacteria 1415
174 Ga0501033_0073659 3300049570 Bacteria 2507
175 Ga0501037_0066812 3300049573 Bacteria 2619
176 Ga0501043_0165937 3300049579 Bacteria 1724
177 Ga0501046_0082663 3300049580 Bacteria 2480
178 Ga0501047_0025168 3300049581 Bacteria 5719
179 Ga0501047_0164919 3300049581 Bacteria 2086
180 Ga0501069_0042094 3300049585 Bacteria 2526
181 Ga0501070_0000519 3300049586 Bacteria 35280
182 Ga0501079_0134195 3300049741 Bacteria 1927
183 Ga0501080_0236785 3300049742 Bacteria 1667
184 Ga0501083_0005008 3300049744 Bacteria 9390
185 Ga0501083_0181103 3300049744 Bacteria 1376
186 Ga0501035_0000862 3300049822 Bacteria 32362
187 Ga0501044_0249036 3300049823 Bacteria 1718
188 Ga0501204_000361 3300049850 Unclassified 3865
189 nmdc:mga09592_117291_c1 3300050508 Bacteria 2285
190 nmdc:mga0qj67_222535_c1 3300050509 Unclassified 1532
191 nmdc:mga0qj67_74561_c1 3300050509 Bacteria 2711
192 nmdc:mga06r32_211870_c1 3300050510 Bacteria 1925
193 nmdc:mga08y16_238064_c1 3300050511 Bacteria 1882
194 nmdc:mga08y16_38920_c1 3300050511 Bacteria 4991
195 nmdc:mga0n895_242_c1 3300050512 Bacteria 34800
196 nmdc:mga0n895_274233_c1 3300050512 Bacteria 1711
197 nmdc:mga0n895_277901_c1 3300050512 Bacteria 1698
198 nmdc:mga0n895_432016_c1 3300050512 Bacteria 1331
199 nmdc:mga0rr50_2293_c1 3300050513 Bacteria 10736
200 nmdc:mga08x19_2362_c1 3300050514 Bacteria 11440
201 nmdc:mga08x19_89900_c1 3300050514 Bacteria 2026
202 nmdc:mga0a205_8_c1 3300050515 Bacteria 127532
203 Ga0495619_0026131 3300053085 Bacteria 3755
204 Ga0500566_0016514 3300053094 Bacteria 4334
205 2524612562 2524023250 Bacteria 5457705
206 Ga0451576_0075573
207 JGI25406J46586_10009936
208 Ga0070683_100002301
209 Ga0070683_100038702
210 Ga0070683_100194832
211 Ga0070690_100008079
212 Ga0070690_100147788
213 Ga0068869_100073872
214 Ga0068869_100083067
215 Ga0068869_100189415
216 Ga0068869_100377429
217 Ga0070666_10000257
218 Ga0070666_10015372
219 Ga0070666_10110012
220 Ga0070682_100000039
221 Ga0068868_100038151
222 Ga0068868_100180616
223 Ga0070660_100085963
224 Ga0070691_10127548
225 Ga0070669_100000592
226 Ga0070669_100048713
227 Ga0070669_100161957
228 Ga0070675_100222046
229 Ga0070673_100138203
230 Ga0070688_100002745
231 Ga0070688_100262129
232 Ga0070659_100002732
233 Ga0070667_100022191
234 Ga0070667_100025193
235 Ga0070700_100009962
236 Ga0070678_100022485
237 Ga0070662_100093554
238 Ga0070706_100086212
239 Ga0070707_100002949
240 Ga0070698_100042339
241 Ga0070698_100046756
242 Ga0070699_100000814
243 Ga0070684_100004343
244 Ga0070686_100041626
245 Ga0070686_100258891
246 Ga0070696_100001106
247 Ga0070696_100395565
248 Ga0070693_100059721
249 Ga0070693_100164674
250 Ga0068855_100020595
251 Ga0070664_100004774
252 Ga0068857_100008580
253 Ga0068857_100012992
254 Ga0068854_100014956
255 Ga0068852_100115944
256 Ga0068852_100276903
257 Ga0068859_100005262
258 Ga0068859_100029236
259 Ga0068859_100039540
260 Ga0068859_100500530
261 Ga0068858_100041158
262 Ga0068858_100359322
263 Ga0068862_100064769
264 Ga0081539_10000117
265 Ga0070717_10078920
266 Ga0097621_100129035
267 Ga0075428_100013915
268 Ga0075428_100061696
269 Ga0075430_100047143
270 Ga0075433_10001674
271 Ga0075434_100006019
272 Ga0075434_100023947
273 Ga0075434_100281985
274 Ga0075434_100377282
275 Ga0075429_100121339
276 Ga0075436_100002178
277 Ga0075436_100003927
278 Ga0075436_100006197
279 Ga0097620_100005262
280 Ga0097620_100029237
281 Ga0097620_100039536
282 Ga0097620_100500491
283 Ga0075435_100000619
284 Ga0075435_100047427
285 Ga0105240_10006834
286 Ga0111539_10132965
287 Ga0111539_10440834
288 Ga0111539_10718697
289 Ga0105245_10083944
290 Ga0105242_10135467
291 Ga0105242_10188881
292 Ga0105249_10045318
293 Ga0105249_10119026
294 Ga0157373_10024241
295 Ga0157370_10015484
296 Ga0157374_10003134
297 Ga0157374_10020143
298 Ga0157378_10302060
299 Ga0157378_10369573
300 Ga0163162_10002494
301 Ga0157372_10050462
302 Ga0157372_10216143
303 Ga0157375_10046225
304 Ga0157375_10131790
305 Ga0163163_10111889
306 Ga0163163_10118054
307 Ga0157379_10132249
308 Ga0157376_10013320
309 Ga0163161_10080715
310 Ga0207653_10001547
311 Ga0207680_10000391
312 Ga0207680_10063561
313 Ga0207684_10208624
314 Ga0207695_10000089
315 Ga0207646_10017684
316 Ga0207681_10000021
317 Ga0207681_10007868
318 Ga0207687_10099878
319 Ga0207706_10263719
320 Ga0207670_10048278
321 Ga0207670_10085886
322 Ga0207670_10112263
323 Ga0207665_10029440
324 Ga0207689_10019850
325 Ga0207689_10087245
326 Ga0207689_10104693
327 Ga0207661_10004770
328 Ga0207661_10020545
329 Ga0207679_10006055
330 Ga0207667_10000211
331 Ga0207651_10110553
332 Ga0207712_10069590
333 Ga0207658_10193653
334 Ga0207677_10313878
335 Ga0207703_10326988
336 Ga0207708_10029726
337 Ga0207641_10183954
338 Ga0207648_10030066
339 Ga0207648_10283739
340 Ga0207648_10630315
341 Ga0207674_10042092
342 Ga0207675_100046035
343 Ga0207683_10030626
344 Ga0207698_10058173
345 Ga0207698_10173092
346 Ga0268265_10052602
347 Ga0307509_10000177
348 Ga0316576_10145745
349 Ga0316576_10175310
350 Ga0316578_10024371
351 Ga0373956_0061528
352 Ga0373961_0000010
353 Ga0373933_0246610
354 Ga0373947_0202198
355 Ga0373937_0145729
356 Ga0316584_0154094
357 Ga0373925_0544530
358 Ga0436362_0769016
359 Ga0466965_0101076
360 Ga0466968_0020947
361 Ga0466957_0236286
362 Ga0466959_0051210
363 Ga0451576_0021620
364 Ga0495629_0003232
365 Ga0495629_0160313
366 Ga0495580_0404003
367 Ga0495587_0030880
368 Ga0495667_0076278
369 Ga0495634_0040589
370 Ga0495647_0014438
371 Ga0495613_0040494
372 Ga0495613_0196867
373 Ga0495581_0001036
374 Ga0495676_0196811
375 Ga0495680_0004183
376 Ga0495614_0015960
377 Ga0496110_0079143
378 Ga0501032_0173026
379 Ga0501033_0073659
380 Ga0501037_0066812
381 Ga0501043_0165937
382 Ga0501046_0082663
383 Ga0501047_0025168
384 Ga0501047_0164919
385 Ga0501069_0042094
386 Ga0501070_0000519
387 Ga0501079_0134195
388 Ga0501080_0236785
389 Ga0501083_0005008
390 Ga0501083_0181103
391 Ga0501035_0000862
392 Ga0501044_0249036
393 Ga0501204_000361
394 nmdc:mga09592_117291_c1
395 nmdc:mga0qj67_222535_c1
396 nmdc:mga0qj67_74561_c1
397 nmdc:mga06r32_211870_c1
398 nmdc:mga08y16_238064_c1
399 nmdc:mga08y16_38920_c1
400 nmdc:mga0n895_242_c1
401 nmdc:mga0n895_274233_c1
402 nmdc:mga0n895_277901_c1
403 nmdc:mga0n895_432016_c1
404 nmdc:mga0rr50_2293_c1
405 nmdc:mga08x19_2362_c1
406 nmdc:mga08x19_89900_c1
407 nmdc:mga0a205_8_c1
408 Ga0495619_0026131
409 Ga0500566_0016514
410 2524612562

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02423

OCD_Mu_crystall

Ornithine cyclodeaminase/mu-crystallin family

23

341

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6t3e-assembly1.cif.gz_A structure of thermococcus litoralis delta(1)-pyrroline-2-carboxylate reductase in complex with nadh and l-proline 0.9741 3 321
1omo-assembly1.cif.gz_B alanine dehydrogenase dimer w/bound nad (archaeal) 0.9674 1 325
1omo-assembly1.cif.gz_B alanine dehydrogenase dimer w/bound nad (archaeal) 0.9615 1 325
6t3e-assembly1.cif.gz_A structure of thermococcus litoralis delta(1)-pyrroline-2-carboxylate reductase in complex with nadh and l-proline 0.9593 3 321
4bv8-assembly1.cif.gz_A-2 crystal structure of the apo form of mouse mu-crystallin. 0.9462 3 316
ID Description Score Start End Superfamily
af_Q9FLY0_138_305_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9702 135 298 3.40.50.720
af_Q9HDZ0_133_310_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.968 130 298 3.40.50.720
1vllA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9555 125 298 3.40.50.720
af_I1NGY5_23_180_3.30.1780.10 Alpha Beta;2-Layer Sandwich;ornithine cyclodeaminase, domain 1;ornithine cyclodeaminase, domain 1 0.9532 7 159 3.30.1780.10
1vllA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9502 125 298 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2G4FW65-F1-model_v4 Ornithine cyclodeaminase 0.9916 2 325 GO:0005737
AF-A0A257SE86-F1-model_v4 Ornithine cyclodeaminase 0.9908 186 325 GO:0005737
AF-A0A6L5F629-F1-model_v4 Ornithine cyclodeaminase family protein 0.9871 1 325 GO:0005737
GO:0042562
AF-A0A2G4FW65-F1-model_v4 Ornithine cyclodeaminase 0.9855 2 325 GO:0005737
AF-V6T970-F1-model_v4 Ornithine cyclodeaminase 0.9854 212 325 GO:0005737

Map