F313656

General Info

Members Datasets Scaffolds Average Seq Length
205 155 190 332

Family's Representative Sequence

Representative Sequence 3300006042|Ga0075368_10006365|Ga0075368_100063652
Length 380
Sequence MGFPAVVRLFQGPSLGMRVRPLKCLHDKDPGMPGEVHSPPHLVAMAGDATVDEDLPRRVAARLSVQDRVFIHGVRAIGFLVLVIVSAIGLFLGVQAFPTLSHYGLSFFTESRWLPSQDIIGISAVVLGTIQVALIALLIAVPLSVLTALFITDWAPPRLRGTLVSLVDLMAAVPGIVFGLWVLFFIQPHATLVAHWISKYFGWFPLFHVRTDVDYPIWNQAPGYPSYAGSAFIAAIAVTMMIFPMATSVMREVFGEAPAGEKEAALALGATRWAMVRTVVLPFGRSGIVGGTMLALGRALGETISVVLVISQTFELKPYVLESGTSTISSLIASSFKEASPAQLSALLTAGFLLFCMTLVVNSLAAVIVTRSRGGAVTEL

Samples

Sample ID Description Type Environment
1 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
2 2643221615 Nocardioides sp. Root224 Isolate Unclassified
3 2643221620 Nocardioides sp. Root240 Isolate Unclassified
4 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
5 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
6 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
7 2738541305 Nocardioides sp. CF167 Isolate Unclassified
8 2739367898 Nocardioides sp. CF479 Isolate Unclassified
9 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
10 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
11 2919069694 Microbacterium sp. 1154 Isolate Unclassified
12 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
13 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
14 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
15 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
54 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
73 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
76 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
83 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
84 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
85 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
90 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
101 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
110 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
131 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
132 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
136 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
148 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
149 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
150 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
153 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
155 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.2
Metatranscriptomes 0.49
Isolates 7.32

Biome Distribution

Category Percentage (%)
Aerial Root 1.46
Bulb 0
Endosphere 14.63
Nodule 0
Rhizoplane 6.83
Rhizosphere 64.88
Stem 0
Stem Tuber 0
Unclassified 12.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10013449 3300003203 Bacteria 3514
2 Ga0070709_10000694 3300005434 Bacteria 19128
3 Ga0070714_100001479 3300005435 Bacteria 17130
4 Ga0070713_100000795 3300005436 Bacteria 20153
5 Ga0070710_10000020 3300005437 Bacteria 85562
6 Ga0070711_100030681 3300005439 Bacteria 3562
7 Ga0070708_100023648 3300005445 Bacteria 5228
8 Ga0070708_100294060 3300005445 Bacteria 1529
9 Ga0070706_100001977 3300005467 Bacteria 21131
10 Ga0070706_100002786 3300005467 Bacteria 17472
11 Ga0070706_100155635 3300005467 Bacteria 2134
12 Ga0070707_100003419 3300005468 Bacteria 15006
13 Ga0070707_100018322 3300005468 Bacteria 6588
14 Ga0070707_100437541 3300005468 Bacteria 1268
15 Ga0070698_100000695 3300005471 Bacteria 35919
16 Ga0070698_100003093 3300005471 Bacteria 18343
17 Ga0070698_100158891 3300005471 Bacteria 2205
18 Ga0070693_100200014 3300005547 Bacteria 1297
19 Ga0070665_100001130 3300005548 Bacteria 32810
20 Ga0068855_100056403 3300005563 Bacteria 4610
21 Ga0068856_100020640 3300005614 Bacteria 6401
22 Ga0068859_100017972 3300005617 Bacteria 7106
23 Ga0068864_100156423 3300005618 Bacteria 2069
24 Ga0068862_100039681 3300005844 Bacteria 4000
25 Ga0081455_10000359 3300005937 Bacteria 60084
26 Ga0081455_10003641 3300005937 Bacteria 17658
27 Ga0081539_10000121 3300005985 Bacteria 183432
28 Ga0081539_10009788 3300005985 Bacteria 7928
29 Ga0081539_10014517 3300005985 Bacteria 5818
30 Ga0081539_10083636 3300005985 Bacteria 1670
31 Ga0070717_10002371 3300006028 Bacteria 13283
32 Ga0075365_10143925 3300006038 Bacteria 1656
33 Ga0075365_10218206 3300006038 Bacteria 1338
34 Ga0075365_10237615 3300006038 Bacteria 1279
35 Ga0075368_10006365 3300006042 Bacteria 4121
36 Ga0075363_100017485 3300006048 Bacteria 3557
37 Ga0075363_100086223 3300006048 Bacteria 1723
38 Ga0075364_10023912 3300006051 Bacteria 3872
39 Ga0070715_10002674 3300006163 Bacteria 5518
40 Ga0070716_100000766 3300006173 Bacteria 13786
41 Ga0070716_100090514 3300006173 Bacteria 1851
42 Ga0070712_100002738 3300006175 Bacteria 10888
43 Ga0070712_100007761 3300006175 Bacteria 6717
44 Ga0075367_10018610 3300006178 Bacteria 3836
45 Ga0075428_100000667 3300006844 Bacteria 35270
46 Ga0075431_100011986 3300006847 Bacteria 8746
47 Ga0097620_100017973 3300006931 Bacteria 7106
48 Ga0075435_100021299 3300007076 Bacteria 4983
49 Ga0105244_10002182 3300009036 Bacteria 15007
50 Ga0105244_10016393 3300009036 Bacteria 4221
51 Ga0105245_10165178 3300009098 Bacteria 2104
52 Ga0105243_10245170 3300009148 Bacteria 1596
53 Ga0105241_10040734 3300009174 Bacteria 3508
54 Ga0105239_10010250 3300010375 Bacteria 10494
55 Ga0105239_10324351 3300010375 Bacteria 1737
56 Ga0157375_10271105 3300013308 Bacteria 1859
57 Ga0213873_10000943 3300021358 Bacteria 4704
58 Ga0207655_1002457 3300025728 Bacteria 15029
59 Ga0207692_10000146 3300025898 Bacteria 22057
60 Ga0207647_10017653 3300025904 Bacteria 4848
61 Ga0207685_10001494 3300025905 Bacteria 4933
62 Ga0207699_10000546 3300025906 Bacteria 18585
63 Ga0207684_10002717 3300025910 Bacteria 17654
64 Ga0207684_10003725 3300025910 Bacteria 14764
65 Ga0207684_10207206 3300025910 Bacteria 1691
66 Ga0207693_10006919 3300025915 Bacteria 9363
67 Ga0207663_10004854 3300025916 Bacteria 6728
68 Ga0207657_10197359 3300025919 Bacteria 1621
69 Ga0207646_10003640 3300025922 Bacteria 17234
70 Ga0207646_10137969 3300025922 Bacteria 2196
71 Ga0207700_10000310 3300025928 Bacteria 28632
72 Ga0207664_10000526 3300025929 Bacteria 27229
73 Ga0207665_10000491 3300025939 Bacteria 26745
74 Ga0207667_10056476 3300025949 Bacteria 4124
75 Ga0207702_10008608 3300026078 Bacteria 8603
76 Ga0268266_10000339 3300028379 Bacteria 73355
77 Ga0268265_10055731 3300028380 Bacteria 3005
78 Ga0265338_10091993 3300028800 Bacteria 2503
79 Ga0307511_10000183 3300030521 Bacteria 62190
80 Ga0265762_1012361 3300030760 Bacteria 1531
81 Ga0265327_10001204 3300031251 Bacteria 34869
82 Ga0307509_10059491 3300031507 Bacteria 4043
83 Ga0316574_0111325 3300035398 Bacteria 1755
84 Ga0395900_0028929 3300037418 Bacteria 5681
85 Ga0395900_0249931 3300037418 Bacteria 1775
86 Ga0395898_0004486 3300037466 Bacteria 15263
87 Ga0395905_0282759 3300037471 Bacteria 1545
88 Ga0436365_0256440 3300039437 Bacteria 7030
89 Ga0436363_1255650 3300039450 Bacteria 3834
90 Ga0436362_0231299 3300039453 Bacteria 14856
91 Ga0451837_0028391 3300041494 Unclassified 2688
92 Ga0451837_0506612 3300041494 Bacteria 2883
93 Ga0451853_3037241 3300041512 Bacteria 3037
94 Ga0466965_0061036 3300044683 Bacteria 1884
95 Ga0466966_0016099 3300044684 Bacteria 4944
96 Ga0466966_0217523 3300044684 Bacteria 1154
97 Ga0466961_0012104 3300044693 Bacteria 5515
98 Ga0466961_0078875 3300044693 Bacteria 2086
99 Ga0466961_0178836 3300044693 Bacteria 1318
100 Ga0466963_0137219 3300044694 Bacteria 1693
101 Ga0466970_0021636 3300044765 Bacteria 3351
102 Ga0466970_0068909 3300044765 Bacteria 1901
103 Ga0466970_0099878 3300044765 Bacteria 1580
104 Ga0466970_0124288 3300044765 Bacteria 1414
105 Ga0466957_0146589 3300044842 Bacteria 1524
106 Ga0466959_0011329 3300045049 Bacteria 6405
107 Ga0466959_0079491 3300045049 Bacteria 2364
108 Ga0466958_0153134 3300045836 Bacteria 1455
109 Ga0466967_0119241 3300045976 Bacteria 2435
110 Ga0466967_0242993 3300045976 Bacteria 1718
111 Ga0466967_0330366 3300045976 Bacteria 1472
112 Ga0495592_0015690 3300046454 Bacteria 5747
113 Ga0495653_0005610 3300046463 Bacteria 10240
114 Ga0495662_0001508 3300046476 Bacteria 11554
115 Ga0495608_0002652 3300046511 Bacteria 12849
116 Ga0495628_0030905 3300046516 Bacteria 4333
117 Ga0495630_0202471 3300046517 Bacteria 1515
118 Ga0495630_0268811 3300046517 Bacteria 1303
119 Ga0495666_0009962 3300046526 Bacteria 4747
120 Ga0495652_0000425 3300046529 Bacteria 49285
121 Ga0495640_0023679 3300046533 Bacteria 4468
122 Ga0495586_0024327 3300046535 Bacteria 3237
123 Ga0495645_0005708 3300046543 Bacteria 8574
124 Ga0495645_0008635 3300046543 Bacteria 7114
125 Ga0495667_0009376 3300046559 Bacteria 6627
126 Ga0495634_0017042 3300046642 Bacteria 5189
127 Ga0495634_0066640 3300046642 Bacteria 2383
128 Ga0495635_0008884 3300046663 Bacteria 7014
129 Ga0495635_0217338 3300046663 Bacteria 1293
130 Ga0495599_0059388 3300046678 Bacteria 2392
131 Ga0495646_0025997 3300046680 Bacteria 3677
132 Ga0495624_0142467 3300046690 Bacteria 1468
133 Ga0495600_0011691 3300046809 Bacteria 5476
134 Ga0495581_0024221 3300047315 Bacteria 3518
135 Ga0495604_0270413 3300047317 Bacteria 1151
136 Ga0495674_0058891 3300047319 Bacteria 3356
137 Ga0495672_0000470 3300047320 Bacteria 47741
138 Ga0495684_0072973 3300047471 Bacteria 2607
139 Ga0496100_0112809 3300048903 Bacteria 1891
140 Ga0496101_0101666 3300048904 Bacteria 2152
141 Ga0496102_0056203 3300048905 Bacteria 3589
142 Ga0496102_0113166 3300048905 Bacteria 2532
143 Ga0496103_0006268 3300048906 Bacteria 7111
144 Ga0496104_0275642 3300048907 Bacteria 1595
145 Ga0496104_0305269 3300048907 Bacteria 1504
146 Ga0496105_0296397 3300048908 Bacteria 1301
147 Ga0496106_0008570 3300048909 Bacteria 7567
148 Ga0496107_0000795 3300048910 Bacteria 18299
149 Ga0496109_0072094 3300048912 Bacteria 3172
150 Ga0496114_0005526 3300048917 Bacteria 9903
151 Ga0496114_0019488 3300048917 Bacteria 5497
152 Ga0496114_0082515 3300048917 Bacteria 2717
153 Ga0496116_0095191 3300048919 Bacteria 1798
154 Ga0496117_0013270 3300048920 Bacteria 7199
155 Ga0496119_0001439 3300048922 Bacteria 28702
156 Ga0496120_0002635 3300048923 Bacteria 17774
157 Ga0496123_0006607 3300048926 Bacteria 11200
158 Ga0496124_0076567 3300048927 Bacteria 2761
159 Ga0496126_0019653 3300048929 Bacteria 6648
160 Ga0501080_0201813 3300049742 Bacteria 1826
161 nmdc:mga03n38_17281_c1 3300050490 Bacteria 2822
162 nmdc:mga00v17_125096_c1 3300050491 Bacteria 1640
163 nmdc:mga00v17_2676_c1 3300050491 Bacteria 9136
164 nmdc:mga0yw44_146989_c1 3300050492 Bacteria 1535
165 nmdc:mga0yw44_2690_c1 3300050492 Bacteria 7669
166 nmdc:mga0yw44_27356_c1 3300050492 Bacteria 3265
167 nmdc:mga0yw44_36012_c1 3300050492 Bacteria 2914
168 nmdc:mga0yw44_79673_c1 3300050492 Bacteria 2050
169 nmdc:mga06z11_153227_c1 3300050494 Bacteria 1312
170 nmdc:mga06z11_47256_c1 3300050494 Bacteria 2185
171 nmdc:mga0qj67_127397_c1 3300050509 Bacteria 2060
172 nmdc:mga06r32_19497_c1 3300050510 Bacteria 6227
173 nmdc:mga0rr50_33416_c1 3300050513 Bacteria 3674
174 nmdc:mga0sz30_22340_c1 3300050516 Bacteria 2567
175 Ga0495601_0002253 3300053077 Bacteria 10875
176 Ga0495601_0020624 3300053077 Bacteria 4026
177 Ga0495612_0000599 3300053078 Bacteria 14477
178 Ga0495619_0027197 3300053085 Bacteria 3684
179 Ga0500643_000186 3300053087 Bacteria 59367
180 Ga0500644_0000093 3300053088 Bacteria 55990
181 Ga0500644_0009079 3300053088 Bacteria 2648
182 Ga0500556_0001447 3300053104 Bacteria 10079
183 Ga0500560_005863 3300053107 Bacteria 2758
184 Ga0500593_001613 3300053117 Bacteria 8119
185 Ga0500593_063041 3300053117 Bacteria 1625
186 Ga0500559_0022442 3300053136 Bacteria 2676
187 Ga0500568_0000008 3300053139 Bacteria 281012
188 Ga0500573_0009689 3300053140 Bacteria 5357
189 Ga0500573_0074504 3300053140 Bacteria 1933
190 Ga0466962_0003067 3300061719 Bacteria 7962

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050510 nmdc:mga06r32_19497_c1 nmdc:mga06r32_19497_c1_826_1770 292
2 3300053088 Ga0500644_0009079 Ga0500644_0009079_1033_1911 292
3 3300046516 Ga0495628_0030905 Ga0495628_0030905_367_1422 294
4 3300053077 Ga0495601_0002253 Ga0495601_0002253_4718_5773 294
5 3300006847 Ga0075431_100011986 Ga0075431_1000119864 297
6 3300005434 Ga0070709_10000694 Ga0070709_100006946 298
7 3300005435 Ga0070714_100001479 Ga0070714_10000147912 298
8 3300005436 Ga0070713_100000795 Ga0070713_10000079512 298
9 3300005437 Ga0070710_10000020 Ga0070710_1000002057 298
10 3300005439 Ga0070711_100030681 Ga0070711_1000306812 298
11 3300006163 Ga0070715_10002674 Ga0070715_100026742 298
12 3300006173 Ga0070716_100000766 Ga0070716_10000076611 298
13 3300006175 Ga0070712_100002738 Ga0070712_1000027386 298
14 3300025898 Ga0207692_10000146 Ga0207692_100001467 298
15 3300025905 Ga0207685_10001494 Ga0207685_100014945 298
16 3300025906 Ga0207699_10000546 Ga0207699_1000054611 298
17 3300025915 Ga0207693_10006919 Ga0207693_100069195 298
18 3300025916 Ga0207663_10004854 Ga0207663_100048542 298
19 3300025928 Ga0207700_10000310 Ga0207700_1000031012 298
20 3300025929 Ga0207664_10000526 Ga0207664_1000052611 298
21 3300025939 Ga0207665_10000491 Ga0207665_1000049113 298
22 3300030760 Ga0265762_1012361 Ga0265762_10123611 298
23 3300044693 Ga0466961_0178836 Ga0466961_0178836_256_1284 298
24 3300045836 Ga0466958_0153134 Ga0466958_0153134_137_1165 298
25 3300046642 Ga0495634_0066640 Ga0495634_0066640_40_987 301
26 3300005445 Ga0070708_100023648 Ga0070708_1000236483 303
27 3300005467 Ga0070706_100002786 Ga0070706_1000027864 303
28 3300005468 Ga0070707_100003419 Ga0070707_1000034193 303
29 3300005471 Ga0070698_100000695 Ga0070698_10000069520 303
30 3300006028 Ga0070717_10002371 Ga0070717_1000237110 303
31 3300025910 Ga0207684_10002717 Ga0207684_100027173 303
32 3300025922 Ga0207646_10003640 Ga0207646_1000364015 303
33 3300053140 Ga0500573_0009689 Ga0500573_0009689_821_1732 303
34 3300050509 nmdc:mga0qj67_127397_c1 nmdc:mga0qj67_127397_c1_170_1108 304
35 3300006175 Ga0070712_100007761 Ga0070712_1000077612 305
36 3300037418 Ga0395900_0028929 Ga0395900_0028929_1146_2162 305
37 3300046678 Ga0495599_0059388 Ga0495599_0059388_111_1124 305
38 3300046517 Ga0495630_0268811 Ga0495630_0268811_342_1286 307
39 3300006844 Ga0075428_100000667 Ga0075428_10000066733 309
40 3300044842 Ga0466957_0146589 Ga0466957_0146589_172_1170 309
41 3300005617 Ga0068859_100017972 Ga0068859_1000179723 310
42 3300005844 Ga0068862_100039681 Ga0068862_1000396813 310
43 3300006931 Ga0097620_100017973 Ga0097620_1000179733 310
44 3300028380 Ga0268265_10055731 Ga0268265_100557314 310
45 3300030521 Ga0307511_10000183 Ga0307511_1000018333 310
46 3300046454 Ga0495592_0015690 Ga0495592_0015690_1272_2279 310
47 3300046463 Ga0495653_0005610 Ga0495653_0005610_4629_5636 310
48 3300046476 Ga0495662_0001508 Ga0495662_0001508_7614_8621 310
49 3300046511 Ga0495608_0002652 Ga0495608_0002652_11814_12821 310
50 3300046526 Ga0495666_0009962 Ga0495666_0009962_74_1081 310
51 3300046533 Ga0495640_0023679 Ga0495640_0023679_86_1093 310
52 3300046535 Ga0495586_0024327 Ga0495586_0024327_388_1395 310
53 3300046543 Ga0495645_0008635 Ga0495645_0008635_1074_2081 310
54 3300046559 Ga0495667_0009376 Ga0495667_0009376_3576_4580 310
55 3300046642 Ga0495634_0017042 Ga0495634_0017042_3856_4863 310
56 3300046663 Ga0495635_0217338 Ga0495635_0217338_209_1216 310
57 3300047315 Ga0495581_0024221 Ga0495581_0024221_159_1166 310
58 3300047317 Ga0495604_0270413 Ga0495604_0270413_78_1085 310
59 3300047319 Ga0495674_0058891 Ga0495674_0058891_173_1180 310
60 3300047471 Ga0495684_0072973 Ga0495684_0072973_1274_2281 310
61 3300031507 Ga0307509_10059491 Ga0307509_100594912 311
62 3300046529 Ga0495652_0000425 Ga0495652_0000425_4528_5583 311
63 3300046543 Ga0495645_0005708 Ga0495645_0005708_2692_3747 311
64 3300046663 Ga0495635_0008884 Ga0495635_0008884_5011_6066 311
65 3300046680 Ga0495646_0025997 Ga0495646_0025997_2447_3502 311
66 3300046809 Ga0495600_0011691 Ga0495600_0011691_2953_4008 311
67 3300048912 Ga0496109_0072094 Ga0496109_0072094_328_1338 311
68 3300053077 Ga0495601_0020624 Ga0495601_0020624_2655_3710 311
69 3300053078 Ga0495612_0000599 Ga0495612_0000599_3851_4906 311
70 3300031251 Ga0265327_10001204 Ga0265327_100012043 312
71 3300041494 Ga0451837_0028391 Ga0451837_0028391_283_1311 312
72 3300041512 Ga0451853_3037241 Ga0451853_3037241_278_1219 312
73 3300053117 Ga0500593_063041 Ga0500593_063041_300_1421 313
74 3300053088 Ga0500644_0000093 Ga0500644_0000093_45037_46086 314
75 3300006048 Ga0075363_100086223 Ga0075363_1000862232 315
76 3300045976 Ga0466967_0119241 Ga0466967_0119241_419_1420 315
77 3300047320 Ga0495672_0000470 Ga0495672_0000470_31105_32145 315
78 iso_pu_bacteria 2738541305 2738869698 315
79 3300006173 Ga0070716_100090514 Ga0070716_1000905142 316
80 3300046517 Ga0495630_0202471 Ga0495630_0202471_118_1134 316
81 3300006178 Ga0075367_10018610 Ga0075367_100186104 317
82 3300050492 nmdc:mga0yw44_146989_c1 nmdc:mga0yw44_146989_c1_152_1213 317
83 3300050494 nmdc:mga06z11_47256_c1 nmdc:mga06z11_47256_c1_871_1935 317
84 3300053139 Ga0500568_0000008 Ga0500568_0000008_72272_73297 317
85 3300039437 Ga0436365_0256440 Ga0436365_0256440_1769_2854 318
86 3300006038 Ga0075365_10143925 Ga0075365_101439251 319
87 3300050490 nmdc:mga03n38_17281_c1 nmdc:mga03n38_17281_c1_1321_2376 319
88 3300050516 nmdc:mga0sz30_22340_c1 nmdc:mga0sz30_22340_c1_1377_2408 319
89 3300005985 Ga0081539_10009788 Ga0081539_100097886 321
90 3300044684 Ga0466966_0016099 Ga0466966_0016099_2852_3973 321
91 3300044693 Ga0466961_0012104 Ga0466961_0012104_815_1936 321
92 3300045049 Ga0466959_0079491 Ga0466959_0079491_839_1960 321
93 3300005445 Ga0070708_100294060 Ga0070708_1002940601 322
94 3300005468 Ga0070707_100437541 Ga0070707_1004375411 322
95 3300005471 Ga0070698_100003093 Ga0070698_10000309313 322
96 3300045976 Ga0466967_0242993 Ga0466967_0242993_422_1399 322
97 3300053087 Ga0500643_000186 Ga0500643_000186_21484_22530 322
98 iso_pu_bacteria 2643221601 2644018766 322
99 iso_pu_bacteria 2643221631 2644179901 322
100 3300025904 Ga0207647_10017653 Ga0207647_100176534 323
101 3300044693 Ga0466961_0078875 Ga0466961_0078875_471_1562 323
102 3300044765 Ga0466970_0068909 Ga0466970_0068909_192_1283 323
103 3300048907 Ga0496104_0275642 Ga0496104_0275642_229_1278 323
104 3300048917 Ga0496114_0019488 Ga0496114_0019488_2146_3168 323
105 3300048917 Ga0496114_0082515 Ga0496114_0082515_962_2011 323
106 3300048919 Ga0496116_0095191 Ga0496116_0095191_103_1116 323
107 3300048920 Ga0496117_0013270 Ga0496117_0013270_3190_4203 323
108 3300048929 Ga0496126_0019653 Ga0496126_0019653_3427_4476 323
109 3300061719 Ga0466962_0003067 Ga0466962_0003067_4485_5507 323
110 3300035398 Ga0316574_0111325 Ga0316574_0111325_16_1035 324
111 3300037418 Ga0395900_0249931 Ga0395900_0249931_181_1176 324
112 3300041494 Ga0451837_0506612 Ga0451837_0506612_260_1261 324
113 3300050491 nmdc:mga00v17_2676_c1 nmdc:mga00v17_2676_c1_5551_6546 324
114 3300050494 nmdc:mga06z11_153227_c1 nmdc:mga06z11_153227_c1_245_1246 324
115 iso_pu_bacteria 2643221615 2644091219 324
116 iso_pu_bacteria 2643221657 2644321022 324
117 iso_pu_bacteria 2739367898 2740167958 324
118 iso_pu_bacteria 2984576629 2984579682 324
119 iso_pu_bacteria 2984592036 2984594735 324
120 iso_pu_bacteria 2990256926 2990257289 324
121 3300005937 Ga0081455_10000359 Ga0081455_1000035940 325
122 3300005985 Ga0081539_10014517 Ga0081539_100145172 325
123 3300053136 Ga0500559_0022442 Ga0500559_0022442_366_1355 325
124 iso_pu_bacteria 2643221681 2644457243 325
125 3300005467 Ga0070706_100001977 Ga0070706_10000197710 326
126 3300005468 Ga0070707_100018322 Ga0070707_1000183226 326
127 3300025910 Ga0207684_10003725 Ga0207684_100037257 326
128 3300037471 Ga0395905_0282759 Ga0395905_0282759_148_1152 326
129 3300044765 Ga0466970_0099878 Ga0466970_0099878_408_1412 326
130 iso_pu_bacteria 2643221620 2644114726 326
131 3300005471 Ga0070698_100158891 Ga0070698_1001588913 327
132 3300005547 Ga0070693_100200014 Ga0070693_1002000141 327
133 3300005548 Ga0070665_100001130 Ga0070665_10000113011 327
134 3300005618 Ga0068864_100156423 Ga0068864_1001564232 327
135 3300005937 Ga0081455_10003641 Ga0081455_100036417 327
136 3300006038 Ga0075365_10218206 Ga0075365_102182062 327
137 3300006038 Ga0075365_10237615 Ga0075365_102376152 327
138 3300006042 Ga0075368_10006365 Ga0075368_100063652 327
139 3300006048 Ga0075363_100017485 Ga0075363_1000174852 327
140 3300006051 Ga0075364_10023912 Ga0075364_100239123 327
141 3300009098 Ga0105245_10165178 Ga0105245_101651781 327
142 3300009148 Ga0105243_10245170 Ga0105243_102451702 327
143 3300010375 Ga0105239_10010250 Ga0105239_100102508 327
144 3300010375 Ga0105239_10324351 Ga0105239_103243512 327
145 3300013308 Ga0157375_10271105 Ga0157375_102711052 327
146 3300025919 Ga0207657_10197359 Ga0207657_101973592 327
147 3300028379 Ga0268266_10000339 Ga0268266_1000033941 327
148 3300044683 Ga0466965_0061036 Ga0466965_0061036_593_1609 327
149 3300044694 Ga0466963_0137219 Ga0466963_0137219_166_1230 327
150 3300048903 Ga0496100_0112809 Ga0496100_0112809_511_1521 327
151 3300048904 Ga0496101_0101666 Ga0496101_0101666_392_1402 327
152 3300048905 Ga0496102_0056203 Ga0496102_0056203_430_1440 327
153 3300048905 Ga0496102_0113166 Ga0496102_0113166_1254_2273 327
154 3300048906 Ga0496103_0006268 Ga0496103_0006268_1705_2715 327
155 3300048909 Ga0496106_0008570 Ga0496106_0008570_5602_6612 327
156 3300048910 Ga0496107_0000795 Ga0496107_0000795_2880_3890 327
157 3300048917 Ga0496114_0005526 Ga0496114_0005526_2402_3412 327
158 3300050491 nmdc:mga00v17_125096_c1 nmdc:mga00v17_125096_c1_359_1423 327
159 3300050492 nmdc:mga0yw44_2690_c1 nmdc:mga0yw44_2690_c1_3908_4954 327
160 3300050492 nmdc:mga0yw44_27356_c1 nmdc:mga0yw44_27356_c1_1450_2499 327
161 3300050492 nmdc:mga0yw44_36012_c1 nmdc:mga0yw44_36012_c1_903_1967 327
162 3300050492 nmdc:mga0yw44_79673_c1 nmdc:mga0yw44_79673_c1_907_1962 327
163 3300053085 Ga0495619_0027197 Ga0495619_0027197_611_1621 327
164 3300053104 Ga0500556_0001447 Ga0500556_0001447_923_1972 327
165 3300053117 Ga0500593_001613 Ga0500593_001613_2676_3725 327
166 3300053140 Ga0500573_0074504 Ga0500573_0074504_270_1295 327
167 iso_pu_bacteria 2773857758 2774380926 327
168 iso_pu_bacteria 2919069694 2919072259 327
169 iso_pu_bacteria 8016254467 8016256762 327
170 3300009036 Ga0105244_10002182 Ga0105244_100021821 328
171 3300009036 Ga0105244_10016393 Ga0105244_100163932 328
172 3300025728 Ga0207655_1002457 Ga0207655_10024571 328
173 3300048907 Ga0496104_0305269 Ga0496104_0305269_178_1278 328
174 3300048908 Ga0496105_0296397 Ga0496105_0296397_120_1181 328
175 3300048922 Ga0496119_0001439 Ga0496119_0001439_4092_5153 328
176 3300048923 Ga0496120_0002635 Ga0496120_0002635_15840_16901 328
177 3300053107 Ga0500560_005863 Ga0500560_005863_58_1071 328
178 iso_pu_bacteria 2757320536 2758226904 328
179 3300003203 JGI25406J46586_10013449 JGI25406J46586_100134493 329
180 3300005467 Ga0070706_100155635 Ga0070706_1001556352 329
181 3300005563 Ga0068855_100056403 Ga0068855_1000564036 329
182 3300005614 Ga0068856_100020640 Ga0068856_1000206403 329
183 3300005985 Ga0081539_10000121 Ga0081539_10000121133 329
184 3300005985 Ga0081539_10083636 Ga0081539_100836362 329
185 3300007076 Ga0075435_100021299 Ga0075435_1000212992 329
186 3300009174 Ga0105241_10040734 Ga0105241_100407343 329
187 3300021358 Ga0213873_10000943 Ga0213873_100009433 329
188 3300025910 Ga0207684_10207206 Ga0207684_102072061 329
189 3300025922 Ga0207646_10137969 Ga0207646_101379692 329
190 3300025949 Ga0207667_10056476 Ga0207667_100564762 329
191 3300026078 Ga0207702_10008608 Ga0207702_100086084 329
192 3300028800 Ga0265338_10091993 Ga0265338_100919932 329
193 3300037466 Ga0395898_0004486 Ga0395898_0004486_12623_13654 329
194 3300039450 Ga0436363_1255650 Ga0436363_1255650_2142_3212 329
195 3300039453 Ga0436362_0231299 Ga0436362_0231299_11347_12381 329
196 3300044684 Ga0466966_0217523 Ga0466966_0217523_67_1110 329
197 3300044765 Ga0466970_0021636 Ga0466970_0021636_2007_3080 329
198 3300044765 Ga0466970_0124288 Ga0466970_0124288_163_1206 329
199 3300045049 Ga0466959_0011329 Ga0466959_0011329_1034_2107 329
200 3300045976 Ga0466967_0330366 Ga0466967_0330366_215_1258 329
201 3300046690 Ga0495624_0142467 Ga0495624_0142467_390_1424 329
202 3300048926 Ga0496123_0006607 Ga0496123_0006607_5925_6938 329
203 3300048927 Ga0496124_0076567 Ga0496124_0076567_1526_2539 329
204 3300049742 Ga0501080_0201813 Ga0501080_0201813_488_1528 329
205 3300050513 nmdc:mga0rr50_33416_c1 nmdc:mga0rr50_33416_c1_507_1502 329

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

140

374

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.7497 22 312
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.733 81 316
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.731 22 312
3dhw-assembly1.cif.gz_B crystal structure of methionine importer metni 0.7281 81 313
3dhw-assembly2.cif.gz_F crystal structure of methionine importer metni 0.7178 81 313
ID Description Score Start End Superfamily
af_Q2FYP8_79_307_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.893 73 321 1.10.3720.10
af_P9WG05_32_321_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8864 31 318 1.10.3720.10
af_Q58420_16_310_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8832 22 320 1.10.3720.10
af_Q2FYP8_79_307_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8816 73 321 1.10.3720.10
af_P9WG07_21_330_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8742 31 320 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A7K1DTZ5-F1-model_v4 Phosphate transport system permease protein 0.9544 88 322 GO:0005315
GO:0005886
GO:0006817
AF-A0A1Q7C053-F1-model_v4 Phosphate transport system permease protein 0.937 7 328 GO:0005315
GO:0005886
GO:0006817
AF-A0A3D0YWR8-F1-model_v4 Phosphate transport system permease protein 0.931 24 316 GO:0005315
GO:0005886
GO:0006817
AF-A0A7K1DTZ5-F1-model_v4 Phosphate transport system permease protein 0.9305 88 322 GO:0005315
GO:0005886
GO:0006817
AF-A0A1Q4EHY7-F1-model_v4 deleted 0.9238 19 314

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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