F313603

General Info

Members Datasets Scaffolds Average Seq Length
205 117 410 469

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100006986|Ga0068852_1000069864
Length 521
Sequence MEGQTQESKEILNLSSPTGGQGAVYFIGIGGIGMSAIARYFHSQGVEVSGYDRAATELTKQLEAEGISIHYSEDVNAIPKDVDLVVYTPAIPKDHAELVYYGENGYKVVKRSDVLQAISADSFNICVAGTHGKTTISTMIAHILRHSGYGCNAFLGGISVNYGTNFWSSANNVCVIEADEYDRSFLKLSPNVAIITAMDADHLDIYGDEKSMQDAFVEFANKIKDGGLLISKFGLKRIKAHPDLPGGKATNTQASLVENADKKSESSKSGASEKVIPPPGEPKGARRGLTYSLQNDSADVFAQNIKIEDGGYEFDVNGKIALSNIKLRIGGMHNVENALVAMVVASELGIDEAKIKAAVADFKGVKRRFEYIIAPKKKQQGGYVEPILIDDYAHHPEELRALLTSVRSLFPQRIVTVVFQPHLFTRTRDLADGFADVLSIADRVILLPIYPARELPIEGVRSEMILNKIDHAEKMMLKKEELITWMKGHEVNKEFGEVIVMAGAGDIDALVQPVKNIIEKK

Samples

Sample ID Description Type Environment
1 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
78 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
94 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
95 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
96 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
97 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
102 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
103 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
104 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
105 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
106 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
107 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
108 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
109 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
110 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
111 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
112 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
113 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
114 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
115 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
116 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.49
Rhizosphere 97.56
Stem 0
Stem Tuber 0
Unclassified 3.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068852_100006986 3300005616 Bacteria 8214
2 rootH2_10047161 3300003320 Bacteria 19289
3 Ga0065714_10067515 3300005288 Bacteria 5410
4 Ga0070658_10006777 3300005327 Bacteria 9272
5 Ga0070658_10020458 3300005327 Bacteria 5304
6 Ga0070658_10042155 3300005327 Bacteria 3684
7 Ga0070683_100070222 3300005329 Bacteria 3267
8 Ga0070670_100031426 3300005331 Bacteria 4573
9 Ga0070670_100153318 3300005331 Bacteria 1995
10 Ga0068869_100023532 3300005334 Bacteria 4256
11 Ga0070666_10003415 3300005335 Bacteria 9622
12 Ga0070666_10032026 3300005335 Bacteria 3472
13 Ga0070680_100031959 3300005336 Bacteria 4233
14 Ga0070680_100032666 3300005336 Bacteria 4189
15 Ga0070680_100078655 3300005336 Bacteria 2717
16 Ga0070660_100001037 3300005339 Bacteria 18678
17 Ga0070660_100020587 3300005339 Bacteria 4850
18 Ga0070660_100027866 3300005339 Bacteria 4221
19 Ga0070660_100062011 3300005339 Bacteria 2904
20 Ga0070691_10011792 3300005341 Bacteria 3998
21 Ga0070669_100000063 3300005353 Bacteria 107421
22 Ga0070659_100014061 3300005366 Bacteria 5972
23 Ga0070659_100016793 3300005366 Bacteria 5499
24 Ga0070667_100001670 3300005367 Bacteria 19832
25 Ga0070663_100060110 3300005455 Bacteria 2732
26 Ga0070681_10035981 3300005458 Bacteria 4973
27 Ga0070681_10085949 3300005458 Bacteria 3098
28 Ga0070685_10063329 3300005466 Bacteria 2171
29 Ga0070679_100000706 3300005530 Bacteria 28666
30 Ga0070679_100003410 3300005530 Bacteria 14554
31 Ga0070679_100031973 3300005530 Bacteria 5204
32 Ga0070684_100009604 3300005535 Bacteria 7626
33 Ga0070684_100011801 3300005535 Bacteria 6971
34 Ga0068855_100001432 3300005563 Bacteria 29672
35 Ga0068855_100002404 3300005563 Bacteria 23090
36 Ga0068855_100027681 3300005563 Bacteria 6782
37 Ga0068855_100028612 3300005563 Bacteria 6667
38 Ga0068855_100057492 3300005563 Bacteria 4559
39 Ga0070664_100007043 3300005564 Bacteria 9072
40 Ga0068857_100017611 3300005577 Bacteria 6264
41 Ga0068854_100013372 3300005578 Bacteria 5384
42 Ga0068856_100247949 3300005614 Bacteria 1796
43 Ga0068852_100000424 3300005616 Bacteria 28108
44 Ga0068852_100001095 3300005616 Bacteria 17879
45 Ga0068852_100001926 3300005616 Bacteria 14145
46 Ga0068852_100079100 3300005616 Bacteria 2911
47 Ga0068859_100005195 3300005617 Bacteria 13229
48 Ga0068864_100191272 3300005618 Unclassified 1876
49 Ga0068860_100036431 3300005843 Bacteria 4714
50 Ga0068862_100079236 3300005844 Bacteria 2847
51 Ga0070716_100079386 3300006173 Bacteria 1954
52 Ga0075433_10011779 3300006852 Bacteria 7043
53 Ga0097620_100005195 3300006931 Bacteria 13229
54 Ga0105240_10003829 3300009093 Bacteria 23261
55 Ga0105240_10008272 3300009093 Bacteria 14892
56 Ga0105240_10044672 3300009093 Bacteria 5626
57 Ga0105240_10054322 3300009093 Bacteria 5020
58 Ga0105241_10197637 3300009174 Bacteria 1678
59 Ga0105237_10020422 3300009545 Bacteria 6828
60 Ga0105238_10015703 3300009551 Bacteria 7666
61 Ga0105239_10013781 3300010375 Bacteria 8973
62 Ga0157373_10000191 3300013100 Bacteria 50334
63 Ga0157373_10031204 3300013100 Bacteria 3835
64 Ga0157373_10033539 3300013100 Bacteria 3693
65 Ga0157373_10045797 3300013100 Bacteria 3122
66 Ga0157371_10000541 3300013102 Bacteria 44986
67 Ga0157371_10001089 3300013102 Bacteria 29420
68 Ga0157371_10007504 3300013102 Bacteria 8821
69 Ga0157371_10008028 3300013102 Bacteria 8449
70 Ga0157371_10008377 3300013102 Bacteria 8244
71 Ga0157371_10009026 3300013102 Bacteria 7882
72 Ga0157371_10034873 3300013102 Bacteria 3607
73 Ga0157371_10076269 3300013102 Bacteria 2374
74 Ga0157370_10001018 3300013104 Bacteria 35308
75 Ga0157370_10002953 3300013104 Bacteria 20247
76 Ga0157370_10007819 3300013104 Bacteria 11585
77 Ga0157370_10160628 3300013104 Bacteria 2091
78 Ga0157369_10015485 3300013105 Bacteria 8593
79 Ga0157369_10229231 3300013105 Bacteria 1942
80 Ga0157374_10016338 3300013296 Bacteria 6519
81 Ga0157378_10007116 3300013297 Bacteria 9769
82 Ga0157372_10000294 3300013307 Bacteria 55599
83 Ga0157372_10001954 3300013307 Bacteria 22390
84 Ga0157372_10017163 3300013307 Bacteria 7771
85 Ga0157372_10024449 3300013307 Bacteria 6562
86 Ga0157372_10085867 3300013307 Bacteria 3570
87 Ga0157372_10182408 3300013307 Unclassified 2430
88 Ga0157372_10203214 3300013307 Bacteria 2295
89 Ga0157375_10042372 3300013308 Bacteria 4406
90 Ga0157375_10314029 3300013308 Bacteria 1731
91 Ga0207680_10004245 3300025903 Bacteria 6784
92 Ga0207647_10000017 3300025904 Bacteria 129999
93 Ga0207647_10023446 3300025904 Bacteria 4080
94 Ga0207705_10008241 3300025909 Bacteria 7621
95 Ga0207705_10010365 3300025909 Bacteria 6778
96 Ga0207705_10033031 3300025909 Bacteria 3698
97 Ga0207707_10006881 3300025912 Bacteria 9916
98 Ga0207695_10000282 3300025913 Bacteria 126242
99 Ga0207695_10015180 3300025913 Bacteria 9082
100 Ga0207695_10034847 3300025913 Bacteria 5467
101 Ga0207695_10080050 3300025913 Bacteria 3310
102 Ga0207671_10009971 3300025914 Bacteria 7892
103 Ga0207671_10012912 3300025914 Bacteria 6686
104 Ga0207671_10013553 3300025914 Bacteria 6491
105 Ga0207671_10046709 3300025914 Bacteria 3204
106 Ga0207660_10025162 3300025917 Bacteria 4038
107 Ga0207660_10025975 3300025917 Bacteria 3983
108 Ga0207660_10026789 3300025917 Bacteria 3928
109 Ga0207657_10005247 3300025919 Bacteria 13572
110 Ga0207657_10020458 3300025919 Bacteria 6252
111 Ga0207657_10024994 3300025919 Bacteria 5518
112 Ga0207657_10060697 3300025919 Bacteria 3244
113 Ga0207657_10109707 3300025919 Bacteria 2280
114 Ga0207652_10000137 3300025921 Bacteria 77723
115 Ga0207652_10006421 3300025921 Bacteria 9480
116 Ga0207652_10009386 3300025921 Bacteria 7866
117 Ga0207681_10000015 3300025923 Bacteria 352892
118 Ga0207694_10011235 3300025924 Bacteria 6762
119 Ga0207694_10091664 3300025924 Bacteria 2398
120 Ga0207650_10121807 3300025925 Bacteria 2032
121 Ga0207644_10055834 3300025931 Bacteria 2848
122 Ga0207690_10079005 3300025932 Bacteria 2291
123 Ga0207690_10080104 3300025932 Bacteria 2278
124 Ga0207690_10111834 3300025932 Bacteria 1969
125 Ga0207665_10118070 3300025939 Bacteria 1871
126 Ga0207689_10032375 3300025942 Bacteria 4351
127 Ga0207667_10000403 3300025949 Bacteria 58481
128 Ga0207667_10002943 3300025949 Bacteria 21138
129 Ga0207667_10016806 3300025949 Bacteria 8255
130 Ga0207667_10056516 3300025949 Unclassified 4122
131 Ga0207667_10197679 3300025949 Bacteria 2063
132 Ga0207712_10097342 3300025961 Bacteria 2180
133 Ga0207640_10028017 3300025981 Bacteria 3438
134 Ga0207658_10000794 3300025986 Bacteria 26621
135 Ga0207677_10001653 3300026023 Bacteria 11812
136 Ga0207639_10113491 3300026041 Unclassified 2213
137 Ga0207678_10042234 3300026067 Bacteria 3952
138 Ga0207676_10163664 3300026095 Unclassified 1930
139 Ga0207674_10000600 3300026116 Bacteria 47324
140 Ga0207698_10005065 3300026142 Bacteria 8086
141 Ga0207698_10010482 3300026142 Bacteria 5960
142 Ga0207698_10177487 3300026142 Unclassified 1883
143 Ga0268266_10010789 3300028379 Bacteria 7959
144 Ga0268265_10000522 3300028380 Bacteria 39151
145 Ga0268265_10197308 3300028380 Bacteria 1743
146 Ga0268264_10023267 3300028381 Bacteria 5055
147 Ga0307517_10001171 3300028786 Bacteria 44114
148 Ga0265338_10055523 3300028800 Bacteria 3522
149 Ga0265327_10000497 3300031251 Bacteria 68318
150 Ga0316576_10075017 3300031727 Bacteria 2502
151 Ga0316577_10021341 3300031733 Bacteria 3593
152 Ga0307410_10036054 3300031852 Bacteria 3218
153 Ga0307406_10041473 3300031901 Unclassified 2868
154 Ga0307415_100007037 3300032126 Bacteria 6119
155 Ga0307510_10006622 3300033180 Bacteria 13818
156 Ga0373947_0098528 3300035725 Bacteria 1834
157 Ga0373937_0243372 3300036401 Bacteria 1695
158 Ga0395899_0006650 3300037312 Bacteria 8959
159 Ga0395899_0007992 3300037312 Bacteria 8147
160 Ga0395899_0031009 3300037312 Bacteria 4019
161 Ga0395899_0058909 3300037312 Bacteria 2831
162 Ga0395900_0003621 3300037418 Bacteria 16611
163 Ga0395900_0018963 3300037418 Bacteria 7017
164 Ga0395900_0082096 3300037418 Bacteria 3311
165 Ga0395900_0288756 3300037418 Bacteria 1629
166 Ga0395900_0288761 3300037418 Bacteria 1629
167 Ga0395898_0003210 3300037466 Bacteria 18391
168 Ga0395898_0032408 3300037466 Bacteria 5215
169 Ga0395898_0044545 3300037466 Bacteria 4366
170 Ga0395898_0125821 3300037466 Bacteria 2455
171 Ga0395898_0243406 3300037466 Bacteria 1715
172 Ga0395905_0001155 3300037471 Bacteria 33052
173 Ga0395905_0117348 3300037471 Bacteria 2501
174 Ga0395901_0001950 3300038443 Bacteria 21241
175 Ga0395901_0029550 3300038443 Bacteria 5644
176 Ga0395901_0160959 3300038443 Bacteria 2357
177 Ga0400489_89206 3300039093 Bacteria 5665
178 Ga0451577_0087331 3300042876 Bacteria 2783
179 Ga0453684_0227915 3300044712 Bacteria 2153
180 Ga0495606_0004599 3300046507 Bacteria 13676
181 Ga0495649_0013099 3300046694 Bacteria 4794
182 Ga0495672_0058171 3300047320 Unclassified 2242
183 Ga0496114_0001368 3300048917 Bacteria 18465
184 Ga0501298_001335 3300049521 Bacteria 3621
185 Ga0501033_0090399 3300049570 Bacteria 2240
186 Ga0501034_0022807 3300049571 Bacteria 6377
187 Ga0501046_0126949 3300049580 Bacteria 1937
188 Ga0501198_000918 3300049649 Bacteria 3718
189 Ga0501201_000659 3300049651 Bacteria 3228
190 Ga0501202_000269 3300049652 Bacteria 7009
191 Ga0501202_001564 3300049652 Bacteria 3692
192 Ga0501207_000229 3300049654 Bacteria 5693
193 Ga0501222_002621 3300049662 Bacteria 2483
194 Ga0501224_005634 3300049664 Bacteria 1801
195 Ga0501233_000655 3300049668 Bacteria 5662
196 Ga0501235_001388 3300049669 Bacteria 5143
197 Ga0501259_001229 3300049688 Bacteria 4271
198 Ga0501261_002084 3300049690 Bacteria 2460
199 Ga0501221_006794 3300049704 Bacteria 1944
200 Ga0501225_0006200 3300049705 Bacteria 3492
201 Ga0501083_0033947 3300049744 Bacteria 3490
202 Ga0501266_000502 3300049763 Bacteria 5182
203 nmdc:mga0n895_41730_c1 3300050512 Bacteria 4461
204 nmdc:mga0a205_85203_c1 3300050515 Bacteria 3052
205 Ga0530510_0007524 3300061734 Bacteria 7586
206 Ga0068852_100006986
207 rootH2_10047161
208 Ga0065714_10067515
209 Ga0070658_10006777
210 Ga0070658_10020458
211 Ga0070658_10042155
212 Ga0070683_100070222
213 Ga0070670_100031426
214 Ga0070670_100153318
215 Ga0068869_100023532
216 Ga0070666_10003415
217 Ga0070666_10032026
218 Ga0070680_100031959
219 Ga0070680_100032666
220 Ga0070680_100078655
221 Ga0070660_100001037
222 Ga0070660_100020587
223 Ga0070660_100027866
224 Ga0070660_100062011
225 Ga0070691_10011792
226 Ga0070669_100000063
227 Ga0070659_100014061
228 Ga0070659_100016793
229 Ga0070667_100001670
230 Ga0070663_100060110
231 Ga0070681_10035981
232 Ga0070681_10085949
233 Ga0070685_10063329
234 Ga0070679_100000706
235 Ga0070679_100003410
236 Ga0070679_100031973
237 Ga0070684_100009604
238 Ga0070684_100011801
239 Ga0068855_100001432
240 Ga0068855_100002404
241 Ga0068855_100027681
242 Ga0068855_100028612
243 Ga0068855_100057492
244 Ga0070664_100007043
245 Ga0068857_100017611
246 Ga0068854_100013372
247 Ga0068856_100247949
248 Ga0068852_100000424
249 Ga0068852_100001095
250 Ga0068852_100001926
251 Ga0068852_100079100
252 Ga0068859_100005195
253 Ga0068864_100191272
254 Ga0068860_100036431
255 Ga0068862_100079236
256 Ga0070716_100079386
257 Ga0075433_10011779
258 Ga0097620_100005195
259 Ga0105240_10003829
260 Ga0105240_10008272
261 Ga0105240_10044672
262 Ga0105240_10054322
263 Ga0105241_10197637
264 Ga0105237_10020422
265 Ga0105238_10015703
266 Ga0105239_10013781
267 Ga0157373_10000191
268 Ga0157373_10031204
269 Ga0157373_10033539
270 Ga0157373_10045797
271 Ga0157371_10000541
272 Ga0157371_10001089
273 Ga0157371_10007504
274 Ga0157371_10008028
275 Ga0157371_10008377
276 Ga0157371_10009026
277 Ga0157371_10034873
278 Ga0157371_10076269
279 Ga0157370_10001018
280 Ga0157370_10002953
281 Ga0157370_10007819
282 Ga0157370_10160628
283 Ga0157369_10015485
284 Ga0157369_10229231
285 Ga0157374_10016338
286 Ga0157378_10007116
287 Ga0157372_10000294
288 Ga0157372_10001954
289 Ga0157372_10017163
290 Ga0157372_10024449
291 Ga0157372_10085867
292 Ga0157372_10182408
293 Ga0157372_10203214
294 Ga0157375_10042372
295 Ga0157375_10314029
296 Ga0207680_10004245
297 Ga0207647_10000017
298 Ga0207647_10023446
299 Ga0207705_10008241
300 Ga0207705_10010365
301 Ga0207705_10033031
302 Ga0207707_10006881
303 Ga0207695_10000282
304 Ga0207695_10015180
305 Ga0207695_10034847
306 Ga0207695_10080050
307 Ga0207671_10009971
308 Ga0207671_10012912
309 Ga0207671_10013553
310 Ga0207671_10046709
311 Ga0207660_10025162
312 Ga0207660_10025975
313 Ga0207660_10026789
314 Ga0207657_10005247
315 Ga0207657_10020458
316 Ga0207657_10024994
317 Ga0207657_10060697
318 Ga0207657_10109707
319 Ga0207652_10000137
320 Ga0207652_10006421
321 Ga0207652_10009386
322 Ga0207681_10000015
323 Ga0207694_10011235
324 Ga0207694_10091664
325 Ga0207650_10121807
326 Ga0207644_10055834
327 Ga0207690_10079005
328 Ga0207690_10080104
329 Ga0207690_10111834
330 Ga0207665_10118070
331 Ga0207689_10032375
332 Ga0207667_10000403
333 Ga0207667_10002943
334 Ga0207667_10016806
335 Ga0207667_10056516
336 Ga0207667_10197679
337 Ga0207712_10097342
338 Ga0207640_10028017
339 Ga0207658_10000794
340 Ga0207677_10001653
341 Ga0207639_10113491
342 Ga0207678_10042234
343 Ga0207676_10163664
344 Ga0207674_10000600
345 Ga0207698_10005065
346 Ga0207698_10010482
347 Ga0207698_10177487
348 Ga0268266_10010789
349 Ga0268265_10000522
350 Ga0268265_10197308
351 Ga0268264_10023267
352 Ga0307517_10001171
353 Ga0265338_10055523
354 Ga0265327_10000497
355 Ga0316576_10075017
356 Ga0316577_10021341
357 Ga0307410_10036054
358 Ga0307406_10041473
359 Ga0307415_100007037
360 Ga0307510_10006622
361 Ga0373947_0098528
362 Ga0373937_0243372
363 Ga0395899_0006650
364 Ga0395899_0007992
365 Ga0395899_0031009
366 Ga0395899_0058909
367 Ga0395900_0003621
368 Ga0395900_0018963
369 Ga0395900_0082096
370 Ga0395900_0288756
371 Ga0395900_0288761
372 Ga0395898_0003210
373 Ga0395898_0032408
374 Ga0395898_0044545
375 Ga0395898_0125821
376 Ga0395898_0243406
377 Ga0395905_0001155
378 Ga0395905_0117348
379 Ga0395901_0001950
380 Ga0395901_0029550
381 Ga0395901_0160959
382 Ga0400489_89206
383 Ga0451577_0087331
384 Ga0453684_0227915
385 Ga0495606_0004599
386 Ga0495649_0013099
387 Ga0495672_0058171
388 Ga0496114_0001368
389 Ga0501298_001335
390 Ga0501033_0090399
391 Ga0501034_0022807
392 Ga0501046_0126949
393 Ga0501198_000918
394 Ga0501201_000659
395 Ga0501202_000269
396 Ga0501202_001564
397 Ga0501207_000229
398 Ga0501222_002621
399 Ga0501224_005634
400 Ga0501233_000655
401 Ga0501235_001388
402 Ga0501259_001229
403 Ga0501261_002084
404 Ga0501221_006794
405 Ga0501225_0006200
406 Ga0501083_0033947
407 Ga0501266_000502
408 nmdc:mga0n895_41730_c1
409 nmdc:mga0a205_85203_c1
410 Ga0530510_0007524

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01225

Mur_ligase

Mur ligase family, catalytic domain

23

123

0.97

PF08245

Mur_ligase_M

Mur ligase middle domain

127

276

0.87

PF08245

Mur_ligase_M

Mur ligase middle domain

279

345

0.86

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

340

505

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6cau-assembly1.cif.gz_A udp-n-acetylmuramate--alanine ligase from acinetobacter baumannii ab5075-uw with amppnp 0.9374 6 308
1gqy-assembly1.cif.gz_A murc - crystal structure of the enzyme from haemophilus influenzae complexed with amppcp 0.9168 6 455
4hv4-assembly2.cif.gz_B 2.25 angstrom resolution crystal structure of udp-n-acetylmuramate--l-alanine ligase (murc) from yersinia pestis co92 in complex with amp 0.9152 2 451
6cau-assembly1.cif.gz_A udp-n-acetylmuramate--alanine ligase from acinetobacter baumannii ab5075-uw with amppnp 0.9138 6 308
4hv4-assembly1.cif.gz_A 2.25 angstrom resolution crystal structure of udp-n-acetylmuramate--l-alanine ligase (murc) from yersinia pestis co92 in complex with amp 0.9127 6 451
ID Description Score Start End Superfamily
1gqqB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9426 11 94 3.40.50.720
1gqqB02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9321 97 307 3.40.1190.10
1j6uA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9258 9 94 3.40.50.720
2f00B02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9232 97 307 3.40.1190.10
af_Q2FXJ0_91_296_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9221 98 309 3.40.1190.10
ID Description Score Start End GO Terms
AF-A0A4Q5R2K9-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.9843 1 336 GO:0005524
GO:0009058
GO:0016020
GO:0016881
AF-A0A4Q5R2K9-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.9757 1 336 GO:0005524
GO:0009058
GO:0016020
GO:0016881
AF-A0A4Q3USX0-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.9712 7 204 GO:0005524
GO:0009058
GO:0016881
AF-A0A0G0IFQ3-F1-model_v4 UDP-N-acetylmuramate-L-alanine ligase 0.9674 8 209 GO:0005524
GO:0009058
GO:0016881
AF-A0A2C6UGL6-F1-model_v4 deleted 0.9671 1 189

Map