F312425

General Info

Members Datasets Scaffolds Average Seq Length
204 158 408 302

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10014435|Ga0105240_100144358
Length 342
Sequence MAEYQNLFTRVQVAGHPGAGVSIGRDDRERTRGLSHWHWLGKIGDAQIGPIYLGWLGVASLIFGFAWFEIVGLNMWASVNWDPVQFVRQLPWLALEPPPPSYGLHLPPMNQGGWWLIAGFCLTMSVLLWWARMYRRARALGMGTHVAWAFASAIWLMLVLGIIRPVLMGSYGESVPFGIFPHLDWTAAFSLRYGNLFYCPFHMLSIAFLYGSTLLFAMHGATILAVSRFGGEREIEQIVDRGTASERAALFWRWTMGFNATMESIHRWAWWCAVLCPLVGGIGILLTGTVVDNWYLWSVKHHVAPSYPTVFGTVIDPTLPALKAQGAAPTTPEPTPSSGVSQ

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
39 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
69 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
70 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
71 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
75 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
76 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
77 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
78 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
87 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
88 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
93 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
104 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
105 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
110 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
111 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
112 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
113 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
114 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
115 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
116 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
117 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
118 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
119 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
120 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
121 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
122 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
123 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
124 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
125 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
126 2512875024
127 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
128 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
129 2643221585 Pelomonas sp. Root662 Isolate Unclassified
130 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
131 2643221656 Pelomonas sp. Root405 Isolate Unclassified
132 2643221660 Methylibium sp. Root1272 Isolate Unclassified
133 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
134 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
135 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
136 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
137 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
138 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
139 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
140 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
141 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
142 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
143 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
144 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
145 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
146 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
147 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
148 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
149 2902330777 Methylobacterium sp. 2A Isolate Unclassified
150 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
151 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
152 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
153 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
154 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
155 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
156 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
157 641522639 Methylobacterium sp. 4-46 Isolate Nodule
158 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.33
Metatranscriptomes 0.49
Isolates 16.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.24
Nodule 1.96
Rhizoplane 2.94
Rhizosphere 62.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10014435 3300009093 Bacteria 10786
2 JGI25153J46596_10008156 3300003215 Bacteria 5044
3 Ga0055543_1015694 3300004625 Bacteria 1454
4 Ga0065165_1000694 3300005262 Bacteria 48071
5 Ga0070658_10357617 3300005327 Bacteria 1250
6 Ga0070666_10043379 3300005335 Bacteria 3012
7 Ga0068868_100233052 3300005338 Bacteria 1545
8 Ga0070668_100010387 3300005347 Bacteria 6917
9 Ga0070671_100077813 3300005355 Bacteria 2772
10 Ga0070701_10203663 3300005438 Bacteria 1171
11 Ga0070678_100123993 3300005456 Bacteria 2042
12 Ga0070696_100198900 3300005546 Bacteria 1495
13 Ga0070665_100002431 3300005548 Bacteria 20528
14 Ga0070665_100003595 3300005548 Bacteria 16416
15 Ga0070665_100013225 3300005548 Bacteria 8314
16 Ga0070665_100473153 3300005548 Bacteria 1263
17 Ga0068852_100033224 3300005616 Bacteria 4282
18 Ga0068859_100033425 3300005617 Bacteria 5164
19 Ga0068851_10118546 3300005834 Bacteria 1420
20 Ga0068858_100020487 3300005842 Bacteria 6182
21 Ga0068862_100018771 3300005844 Bacteria 5763
22 Ga0081455_10169944 3300005937 Bacteria 1662
23 Ga0081540_1000942 3300005983 Bacteria 26195
24 Ga0075365_10013222 3300006038 Bacteria 4926
25 Ga0075364_10081478 3300006051 Bacteria 2140
26 Ga0068871_100144015 3300006358 Bacteria 2028
27 Ga0097620_100033425 3300006931 Bacteria 5164
28 Ga0105247_10032612 3300009101 Bacteria 3165
29 Ga0105248_10042613 3300009177 Bacteria 5091
30 Ga0105248_10104311 3300009177 Bacteria 3196
31 Ga0105237_10108307 3300009545 Bacteria 2770
32 Ga0105239_10332188 3300010375 Bacteria 1715
33 Ga0163162_10100562 3300013306 Bacteria 2983
34 Ga0163162_10292481 3300013306 Bacteria 1760
35 Ga0157375_10207656 3300013308 Bacteria 2115
36 Ga0163163_10016293 3300014325 Bacteria 6901
37 Ga0157380_10075061 3300014326 Bacteria 2747
38 Ga0157380_10215409 3300014326 Bacteria 1715
39 Ga0157379_10083128 3300014968 Bacteria 2870
40 Ga0157376_10111765 3300014969 Bacteria 2406
41 Ga0163161_10182831 3300017792 Bacteria 1608
42 Ga0213875_10045028 3300021388 Bacteria 2071
43 Ga0213875_10156120 3300021388 Bacteria 1070
44 Ga0209563_101237 3300025230 Bacteria 7046
45 Ga0209758_1000557 3300025297 Bacteria 58827
46 Ga0207426_1000712 3300025302 Bacteria 38841
47 Ga0207426_1017190 3300025302 Bacteria 2576
48 Ga0207688_10105693 3300025901 Bacteria 1630
49 Ga0207680_10033341 3300025903 Bacteria 2937
50 Ga0207705_10004127 3300025909 Bacteria 11009
51 Ga0207705_10180560 3300025909 Bacteria 1593
52 Ga0207695_10047978 3300025913 Bacteria 4513
53 Ga0207671_10052168 3300025914 Bacteria 3030
54 Ga0207644_10027787 3300025931 Bacteria 3911
55 Ga0207711_10124701 3300025941 Bacteria 2303
56 Ga0207651_10074145 3300025960 Bacteria 2423
57 Ga0207668_10018620 3300025972 Bacteria 4374
58 Ga0207703_10015115 3300026035 Bacteria 6024
59 Ga0207678_10224199 3300026067 Bacteria 1609
60 Ga0207683_10140526 3300026121 Bacteria 2176
61 Ga0207698_10035794 3300026142 Bacteria 3636
62 Ga0209996_1002628 3300027395 Bacteria 2231
63 Ga0209966_1000177 3300027695 Bacteria 26013
64 Ga0268266_10000539 3300028379 Bacteria 52742
65 Ga0268266_10006125 3300028379 Bacteria 11074
66 Ga0268265_10016800 3300028380 Bacteria 5037
67 Ga0265328_10000030 3300031239 Bacteria 109595
68 Ga0265325_10049290 3300031241 Bacteria 2174
69 Ga0265339_10007113 3300031249 Bacteria 7266
70 Ga0265331_10001233 3300031250 Bacteria 19228
71 Ga0265331_10136927 3300031250 Bacteria 1115
72 Ga0265327_10000613 3300031251 Bacteria 58852
73 Ga0265327_10007777 3300031251 Bacteria 8177
74 Ga0265327_10040682 3300031251 Bacteria 2512
75 Ga0265316_10021791 3300031344 Bacteria 5418
76 Ga0265316_10123662 3300031344 Bacteria 1953
77 Ga0265314_10010213 3300031711 Bacteria 7855
78 Ga0265314_10198321 3300031711 Bacteria 1189
79 Ga0316576_10055869 3300031727 Bacteria 2882
80 Ga0316576_10060082 3300031727 Bacteria 2784
81 Ga0307406_10034675 3300031901 Bacteria 3098
82 Ga0307510_10001789 3300033180 Bacteria 23995
83 Ga0307510_10011856 3300033180 Bacteria 10340
84 Ga0316588_1001907 3300033528 Bacteria 3547
85 Ga0373939_0064442 3300035114 Bacteria 1176
86 Ga0316574_0002607 3300035398 Bacteria 9084
87 Ga0316574_0090004 3300035398 Bacteria 1956
88 Ga0373937_0142051 3300036401 Bacteria 2246
89 Ga0316584_0002294 3300036712 Bacteria 12038
90 Ga0316584_0008974 3300036712 Bacteria 6915
91 Ga0316584_0033895 3300036712 Bacteria 3783
92 Ga0395900_0160923 3300037418 Bacteria 2290
93 Ga0436364_0328296 3300037853 Bacteria 143298
94 Ga0436364_0731834 3300037853 Bacteria 14258
95 Ga0436364_1329069 3300037853 Bacteria 3023
96 Ga0400483_027220 3300039062 Bacteria 17756
97 Ga0400483_177087 3300039062 Bacteria 1438
98 Ga0400483_229332 3300039062 Bacteria 17573
99 Ga0436360_0189843 3300039438 Bacteria 2944
100 Ga0436360_0287017 3300039438 Bacteria 3577
101 Ga0436360_0968550 3300039438 Bacteria 8130
102 Ga0436363_1502409 3300039450 Bacteria 2960
103 Ga0451789_0086137 3300041443 Bacteria 1324
104 Ga0451577_0003136 3300042876 Bacteria 18631
105 Ga0451577_0027554 3300042876 Bacteria 5143
106 Ga0451577_0043611 3300042876 Bacteria 4018
107 Ga0451577_0047676 3300042876 Bacteria 3830
108 Ga0451577_0074600 3300042876 Bacteria 3025
109 Ga0451577_0151898 3300042876 Bacteria 2084
110 Ga0451577_0176719 3300042876 Bacteria 1924
111 Ga0451577_0194322 3300042876 Bacteria 1831
112 Ga0451577_0217092 3300042876 Bacteria 1728
113 Ga0453684_0194738 3300044712 Bacteria 2368
114 Ga0453684_0386340 3300044712 Bacteria 1571
115 Ga0466968_0057405 3300044735 Bacteria 1673
116 Ga0451576_0001928 3300045051 Bacteria 33191
117 Ga0451576_0001939 3300045051 Bacteria 33033
118 Ga0451576_0073567 3300045051 Bacteria 3556
119 Ga0451576_0343717 3300045051 Bacteria 1562
120 Ga0495629_0162162 3300046459 Bacteria 1553
121 Ga0495650_0012241 3300046471 Bacteria 4628
122 Ga0495606_0030814 3300046507 Bacteria 3740
123 Ga0495628_0195595 3300046516 Bacteria 1526
124 Ga0495600_0134107 3300046809 Bacteria 1609
125 Ga0495675_0082748 3300047444 Bacteria 2021
126 Ga0495602_0101912 3300048088 Bacteria 2354
127 Ga0496104_0127042 3300048907 Bacteria 2448
128 Ga0496105_0348921 3300048908 Bacteria 1182
129 Ga0496108_0015732 3300048911 Bacteria 6169
130 Ga0496110_0034632 3300048913 Bacteria 4376
131 Ga0496110_0202649 3300048913 Bacteria 1803
132 Ga0496121_0013557 3300048924 Bacteria 8742
133 Ga0496121_0017608 3300048924 Bacteria 7281
134 Ga0496126_0020824 3300048929 Bacteria 6419
135 Ga0496126_0128866 3300048929 Bacteria 2188
136 Ga0501031_0023768 3300049568 Bacteria 3995
137 Ga0501032_0020613 3300049569 Bacteria 4589
138 Ga0501033_0058434 3300049570 Bacteria 2849
139 Ga0501038_0018259 3300049574 Bacteria 6331
140 Ga0501039_0262462 3300049575 Bacteria 1357
141 Ga0501042_0206726 3300049578 Bacteria 1416
142 Ga0501047_0257382 3300049581 Bacteria 1593
143 Ga0501047_0458627 3300049581 Bacteria 1103
144 Ga0501070_0002177 3300049586 Bacteria 17230
145 Ga0501072_0055218 3300049588 Bacteria 3131
146 Ga0501073_0065853 3300049589 Bacteria 2526
147 Ga0501074_0116964 3300049590 Bacteria 1907
148 Ga0501080_0045399 3300049742 Bacteria 4090
149 Ga0501280_000959 3300049776 Bacteria 6034
150 Ga0501280_017323 3300049776 Bacteria 1046
151 Ga0501035_0000398 3300049822 Bacteria 49830
152 Ga0501035_0151376 3300049822 Bacteria 2013
153 Ga0501044_0142835 3300049823 Bacteria 2381
154 nmdc:mga00v17_219340_c1 3300050491 Bacteria 1231
155 nmdc:mga0yw44_1065_c1 3300050492 Bacteria 10532
156 Ga0500635_0000034 3300053080 Bacteria 96919
157 Ga0500646_0012782 3300053090 Bacteria 2170
158 Ga0500647_0016395 3300053091 Bacteria 3404
159 Ga0500651_0038479 3300053093 Bacteria 3013
160 Ga0500640_038108 3300053095 Bacteria 2112
161 Ga0500641_0000410 3300053096 Bacteria 15886
162 Ga0500641_0002183 3300053096 Bacteria 6933
163 Ga0500594_0000395 3300053118 Bacteria 9720
164 Ga0500595_000084 3300053119 Bacteria 66292
165 Ga0500652_020679 3300053131 Bacteria 2466
166 Ga0500559_0000109 3300053136 Bacteria 65246
167 Ga0500559_0001975 3300053136 Bacteria 11057
168 Ga0500577_0000114 3300053142 Bacteria 19725
169 Ga0500589_018281 3300053147 Bacteria 3171
170 Ga0500604_0004663 3300053151 Bacteria 3631
171 Ga0500622_0009115 3300053156 Bacteria 5509
172 2512963785 2512875024 Bacteria 7195110
173 2545674148 2545555834 Bacteria 8130841
174 2596373255 2595698237 Bacteria 6712432
175 2643937268 2643221585 Bacteria 5812563
176 2644301544 2643221654 Bacteria 5273570
177 2644318433 2643221656 Bacteria 5809961
178 2644338233 2643221660 Bacteria 4208257
179 2738708818 2738541275 Bacteria 4830863
180 2738744074 2738541281 Bacteria 5112672
181 2738847243 2738541301 Bacteria 4834102
182 2738862972 2738541304 Bacteria 4833665
183 2739295490 2738543022 Bacteria 4835059
184 2739353304 2738543032 Bacteria 5115625
185 2739357168 2738543033 Bacteria 4833336
186 2829748414 2829745981 Bacteria 5406054
187 2837681550 2837678835 Bacteria 5252418
188 2842336660 2842333319 Bacteria 8899485
189 2842700557 2842698319 Bacteria 5190321
190 2844315617 2844315083 Bacteria 8138177
191 2861693247 2861691609 Bacteria 5628931
192 2888389554 2888388044 Bacteria 7304136
193 2889307691 2889306138 Bacteria 6358934
194 2894773970 2894772417 Bacteria 5305674
195 2902333372 2902330777 Bacteria 6395352
196 2902407042 2902405164 Bacteria 6784948
197 2903732689 2903727486 Bacteria 8281579
198 2906605457 2906602504 Bacteria 8295279
199 2928102428 2928100450 Bacteria 4837635
200 2928127222 2928125067 Bacteria 5937560
201 2928961069 2928959182 Bacteria 4725774
202 3003666923 3003665799 Bacteria 7279786
203 641643875 641522639 Bacteria 7737025
204 8045864974 8045864390 Bacteria 5043873
205 Ga0105240_10014435
206 JGI25153J46596_10008156
207 Ga0055543_1015694
208 Ga0065165_1000694
209 Ga0070658_10357617
210 Ga0070666_10043379
211 Ga0068868_100233052
212 Ga0070668_100010387
213 Ga0070671_100077813
214 Ga0070701_10203663
215 Ga0070678_100123993
216 Ga0070696_100198900
217 Ga0070665_100002431
218 Ga0070665_100003595
219 Ga0070665_100013225
220 Ga0070665_100473153
221 Ga0068852_100033224
222 Ga0068859_100033425
223 Ga0068851_10118546
224 Ga0068858_100020487
225 Ga0068862_100018771
226 Ga0081455_10169944
227 Ga0081540_1000942
228 Ga0075365_10013222
229 Ga0075364_10081478
230 Ga0068871_100144015
231 Ga0097620_100033425
232 Ga0105247_10032612
233 Ga0105248_10042613
234 Ga0105248_10104311
235 Ga0105237_10108307
236 Ga0105239_10332188
237 Ga0163162_10100562
238 Ga0163162_10292481
239 Ga0157375_10207656
240 Ga0163163_10016293
241 Ga0157380_10075061
242 Ga0157380_10215409
243 Ga0157379_10083128
244 Ga0157376_10111765
245 Ga0163161_10182831
246 Ga0213875_10045028
247 Ga0213875_10156120
248 Ga0209563_101237
249 Ga0209758_1000557
250 Ga0207426_1000712
251 Ga0207426_1017190
252 Ga0207688_10105693
253 Ga0207680_10033341
254 Ga0207705_10004127
255 Ga0207705_10180560
256 Ga0207695_10047978
257 Ga0207671_10052168
258 Ga0207644_10027787
259 Ga0207711_10124701
260 Ga0207651_10074145
261 Ga0207668_10018620
262 Ga0207703_10015115
263 Ga0207678_10224199
264 Ga0207683_10140526
265 Ga0207698_10035794
266 Ga0209996_1002628
267 Ga0209966_1000177
268 Ga0268266_10000539
269 Ga0268266_10006125
270 Ga0268265_10016800
271 Ga0265328_10000030
272 Ga0265325_10049290
273 Ga0265339_10007113
274 Ga0265331_10001233
275 Ga0265331_10136927
276 Ga0265327_10000613
277 Ga0265327_10007777
278 Ga0265327_10040682
279 Ga0265316_10021791
280 Ga0265316_10123662
281 Ga0265314_10010213
282 Ga0265314_10198321
283 Ga0316576_10055869
284 Ga0316576_10060082
285 Ga0307406_10034675
286 Ga0307510_10001789
287 Ga0307510_10011856
288 Ga0316588_1001907
289 Ga0373939_0064442
290 Ga0316574_0002607
291 Ga0316574_0090004
292 Ga0373937_0142051
293 Ga0316584_0002294
294 Ga0316584_0008974
295 Ga0316584_0033895
296 Ga0395900_0160923
297 Ga0436364_0328296
298 Ga0436364_0731834
299 Ga0436364_1329069
300 Ga0400483_027220
301 Ga0400483_177087
302 Ga0400483_229332
303 Ga0436360_0189843
304 Ga0436360_0287017
305 Ga0436360_0968550
306 Ga0436363_1502409
307 Ga0451789_0086137
308 Ga0451577_0003136
309 Ga0451577_0027554
310 Ga0451577_0043611
311 Ga0451577_0047676
312 Ga0451577_0074600
313 Ga0451577_0151898
314 Ga0451577_0176719
315 Ga0451577_0194322
316 Ga0451577_0217092
317 Ga0453684_0194738
318 Ga0453684_0386340
319 Ga0466968_0057405
320 Ga0451576_0001928
321 Ga0451576_0001939
322 Ga0451576_0073567
323 Ga0451576_0343717
324 Ga0495629_0162162
325 Ga0495650_0012241
326 Ga0495606_0030814
327 Ga0495628_0195595
328 Ga0495600_0134107
329 Ga0495675_0082748
330 Ga0495602_0101912
331 Ga0496104_0127042
332 Ga0496105_0348921
333 Ga0496108_0015732
334 Ga0496110_0034632
335 Ga0496110_0202649
336 Ga0496121_0013557
337 Ga0496121_0017608
338 Ga0496126_0020824
339 Ga0496126_0128866
340 Ga0501031_0023768
341 Ga0501032_0020613
342 Ga0501033_0058434
343 Ga0501038_0018259
344 Ga0501039_0262462
345 Ga0501042_0206726
346 Ga0501047_0257382
347 Ga0501047_0458627
348 Ga0501070_0002177
349 Ga0501072_0055218
350 Ga0501073_0065853
351 Ga0501074_0116964
352 Ga0501080_0045399
353 Ga0501280_000959
354 Ga0501280_017323
355 Ga0501035_0000398
356 Ga0501035_0151376
357 Ga0501044_0142835
358 nmdc:mga00v17_219340_c1
359 nmdc:mga0yw44_1065_c1
360 Ga0500635_0000034
361 Ga0500646_0012782
362 Ga0500647_0016395
363 Ga0500651_0038479
364 Ga0500640_038108
365 Ga0500641_0000410
366 Ga0500641_0002183
367 Ga0500594_0000395
368 Ga0500595_000084
369 Ga0500652_020679
370 Ga0500559_0000109
371 Ga0500559_0001975
372 Ga0500577_0000114
373 Ga0500589_018281
374 Ga0500604_0004663
375 Ga0500622_0009115
376 2512963785
377 2545674148
378 2596373255
379 2643937268
380 2644301544
381 2644318433
382 2644338233
383 2738708818
384 2738744074
385 2738847243
386 2738862972
387 2739295490
388 2739353304
389 2739357168
390 2829748414
391 2837681550
392 2842336660
393 2842700557
394 2844315617
395 2861693247
396 2888389554
397 2889307691
398 2894773970
399 2902333372
400 2902407042
401 2903732689
402 2906605457
403 2928102428
404 2928127222
405 2928961069
406 3003666923
407 641643875
408 8045864974

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00124

Photo_RC

Photosynthetic reaction centre protein

51

304

0.99

Map