F312283
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 204 | 128 | 204 | 763 |
Family's Representative Sequence
| Representative Sequence | 3300005719|Ga0068861_100037435|Ga0068861_1000374352 |
| Length | 809 |
| Sequence | VKTWLSRAARLLMTPAARGPRGRLARRCLLVAAGIAIVGAAWIRLGPLPDGLLDEAAAVRSTTVFDRNGEILYEARSDLGTRETRLRADRLPPSLVAATLAAEDHRFYHHVGVDPIALTRALWRNVTALDRVEGGSTLTQQVAKLLLDRRAQLATGHPRRRGWLAKLDEAVVALRLEHRLSKPEILALYLNLAPYGNQIAGAERASRAYFGAPAAHLTAAQAAFLAALPQRPSRFNPWRGFAQASARQRAVLGRMEQRGFITATVAAESRTERLRLIEETPRFLAPHFVSMVLADLPDPKPARVVTTLDAELQRTVEGIVRTQRALLERHGAKNIAIVVLDNQTSQWLAWEGSGNFDDNARGGSINGPLALRQPGSALKPFTYALAFETGESPATILPDVPATFPTAEEGVVYTPRNYDGRFRGPLTARAALAGSINVAAVSLASDLGVPNVLRFLRRAGFSTFDKTGAYYGLGVTLGNAEVRLDELTAAYAAFARGGEWRAPRTRLDPQPRLADPVQLVSPRTAFWISDILSDDDARSYIFGRGSNLEFPFPVAVKTGTSQAYHDNWTIGFSKHVTVGVWVGNFDRSPLIGSSGVTGAGPIFHAVMLAAEARSAISSGDSSGESPDVVEPPAGLVEASVCALSGMRAGDACPIKRRERLAADASVLGGPACTWHHAGPDGVVTVWPARYRAWAQSAGLLTPHERVAARQVAAARRAETPQTAATGLRVTNPAEGTVFLIDPTLRSEFQAVPLRAMGAGNGQVSWTVNGRAIGSASADAALDWPLERGRQHAVVRDAAGRTAEVSFTVK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886012 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 | Metagenome | Rhizosphere |
| 2 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 3 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 4 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 19 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 27 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 28 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 29 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 30 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 31 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 32 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 33 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 34 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 35 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 36 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 37 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 38 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 39 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 40 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 41 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 42 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 71 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 72 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 73 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 74 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 75 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 76 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 77 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 78 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 79 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 80 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 81 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 82 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 83 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 84 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 85 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 86 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 87 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 90 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 91 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 92 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 93 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 94 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 96 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 97 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 98 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 99 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 100 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 101 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 114 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 115 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 122 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 123 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300059421 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 125 | 3300059423 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 126 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 127 | 3300059426 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 128 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.41 |
| Nodule | 0 |
| Rhizoplane | 1.96 |
| Rhizosphere | 92.65 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.98 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | MBSR1b_contig_14354628 | 2162886012 | Bacteria | 2046 |
| 2 | JGI25406J46586_10003563 | 3300003203 | Bacteria | 7300 |
| 3 | JGI25406J46586_10003701 | 3300003203 | Bacteria | 7164 |
| 4 | Ga0065712_10000535 | 3300005290 | Bacteria | 10709 |
| 5 | Ga0065715_10089438 | 3300005293 | Bacteria | 10144 |
| 6 | Ga0070670_100001133 | 3300005331 | Bacteria | 21169 |
| 7 | Ga0070670_100001952 | 3300005331 | Bacteria | 16908 |
| 8 | Ga0070670_100016860 | 3300005331 | Bacteria | 6270 |
| 9 | Ga0070682_100000006 | 3300005337 | Bacteria | 369078 |
| 10 | Ga0068868_100000010 | 3300005338 | Bacteria | 117927 |
| 11 | Ga0068868_100002859 | 3300005338 | Bacteria | 11970 |
| 12 | Ga0068868_100017048 | 3300005338 | Bacteria | 5405 |
| 13 | Ga0070689_100012086 | 3300005340 | Bacteria | 6207 |
| 14 | Ga0070687_100013512 | 3300005343 | Bacteria | 3640 |
| 15 | Ga0070668_100004732 | 3300005347 | Bacteria | 10095 |
| 16 | Ga0070669_100001112 | 3300005353 | Bacteria | 19629 |
| 17 | Ga0070669_100058271 | 3300005353 | Unclassified | 2834 |
| 18 | Ga0070675_100023457 | 3300005354 | Bacteria | 4934 |
| 19 | Ga0070675_100061032 | 3300005354 | Bacteria | 3113 |
| 20 | Ga0070674_100017866 | 3300005356 | Bacteria | 4471 |
| 21 | Ga0070659_100031089 | 3300005366 | Unclassified | 4134 |
| 22 | Ga0070667_100021331 | 3300005367 | Bacteria | 5380 |
| 23 | Ga0070694_100040303 | 3300005444 | Bacteria | 3113 |
| 24 | Ga0070681_10078307 | 3300005458 | Unclassified | 3263 |
| 25 | Ga0068867_100011307 | 3300005459 | Bacteria | 6297 |
| 26 | Ga0070707_100042252 | 3300005468 | Bacteria | 4364 |
| 27 | Ga0070698_100011932 | 3300005471 | Bacteria | 9220 |
| 28 | Ga0070699_100049147 | 3300005518 | Bacteria | 3651 |
| 29 | Ga0070697_100023868 | 3300005536 | Bacteria | 4866 |
| 30 | Ga0070672_100000096 | 3300005543 | Bacteria | 43278 |
| 31 | Ga0070695_100002313 | 3300005545 | Bacteria | 10922 |
| 32 | Ga0070665_100013217 | 3300005548 | Bacteria | 8316 |
| 33 | Ga0068857_100018230 | 3300005577 | Bacteria | 6157 |
| 34 | Ga0068856_100040301 | 3300005614 | Bacteria | 4587 |
| 35 | Ga0068859_100013774 | 3300005617 | Bacteria | 8108 |
| 36 | Ga0068859_100045091 | 3300005617 | Bacteria | 4430 |
| 37 | Ga0068859_100080501 | 3300005617 | Unclassified | 3298 |
| 38 | Ga0068864_100000689 | 3300005618 | Bacteria | 28247 |
| 39 | Ga0068861_100037435 | 3300005719 | Bacteria | 3607 |
| 40 | Ga0068858_100013189 | 3300005842 | Bacteria | 7787 |
| 41 | Ga0068858_100031356 | 3300005842 | Bacteria | 4936 |
| 42 | Ga0068862_100028216 | 3300005844 | Bacteria | 4726 |
| 43 | Ga0068862_100034934 | 3300005844 | Bacteria | 4255 |
| 44 | Ga0081539_10000134 | 3300005985 | Bacteria | 173625 |
| 45 | Ga0081539_10002993 | 3300005985 | Bacteria | 22084 |
| 46 | Ga0075365_10028537 | 3300006038 | Bacteria | 3560 |
| 47 | Ga0075368_10007173 | 3300006042 | Bacteria | 3927 |
| 48 | Ga0075366_10011337 | 3300006195 | Bacteria | 5031 |
| 49 | Ga0075428_100002414 | 3300006844 | Bacteria | 20301 |
| 50 | Ga0075428_100006174 | 3300006844 | Bacteria | 13333 |
| 51 | Ga0075428_100013300 | 3300006844 | Bacteria | 9155 |
| 52 | Ga0075428_100015766 | 3300006844 | Bacteria | 8370 |
| 53 | Ga0075430_100029676 | 3300006846 | Bacteria | 4642 |
| 54 | Ga0075431_100004654 | 3300006847 | Bacteria | 13480 |
| 55 | Ga0075431_100012682 | 3300006847 | Bacteria | 8511 |
| 56 | Ga0075431_100121806 | 3300006847 | Unclassified | 2691 |
| 57 | Ga0075433_10042919 | 3300006852 | Bacteria | 3925 |
| 58 | Ga0075433_10043460 | 3300006852 | Bacteria | 3900 |
| 59 | Ga0075429_100004168 | 3300006880 | Bacteria | 12374 |
| 60 | Ga0075429_100007576 | 3300006880 | Bacteria | 9427 |
| 61 | Ga0097620_100013774 | 3300006931 | Bacteria | 8108 |
| 62 | Ga0097620_100045090 | 3300006931 | Bacteria | 4430 |
| 63 | Ga0097620_100080500 | 3300006931 | Unclassified | 3298 |
| 64 | Ga0111539_10002069 | 3300009094 | Bacteria | 26819 |
| 65 | Ga0111539_10006715 | 3300009094 | Bacteria | 14816 |
| 66 | Ga0111539_10007966 | 3300009094 | Bacteria | 13510 |
| 67 | Ga0111539_10017180 | 3300009094 | Bacteria | 8957 |
| 68 | Ga0105245_10000003 | 3300009098 | Bacteria | 488207 |
| 69 | Ga0105245_10000119 | 3300009098 | Bacteria | 76107 |
| 70 | Ga0105245_10041354 | 3300009098 | Bacteria | 4109 |
| 71 | Ga0114129_10001036 | 3300009147 | Bacteria | 36363 |
| 72 | Ga0114129_10001729 | 3300009147 | Bacteria | 29783 |
| 73 | Ga0114129_10003143 | 3300009147 | Bacteria | 23175 |
| 74 | Ga0114129_10010319 | 3300009147 | Bacteria | 13327 |
| 75 | Ga0114129_10027273 | 3300009147 | Bacteria | 8086 |
| 76 | Ga0114129_10049526 | 3300009147 | Bacteria | 5903 |
| 77 | Ga0114129_10061663 | 3300009147 | Bacteria | 5241 |
| 78 | Ga0114129_10103421 | 3300009147 | Bacteria | 3938 |
| 79 | Ga0114129_10149012 | 3300009147 | Bacteria | 3203 |
| 80 | Ga0105242_10008060 | 3300009176 | Bacteria | 8113 |
| 81 | Ga0105248_10080273 | 3300009177 | Bacteria | 3666 |
| 82 | Ga0105249_10012624 | 3300009553 | Bacteria | 7449 |
| 83 | Ga0157378_10000027 | 3300013297 | Bacteria | 128412 |
| 84 | Ga0157378_10000038 | 3300013297 | Bacteria | 116387 |
| 85 | Ga0157375_10000013 | 3300013308 | Bacteria | 323500 |
| 86 | Ga0157375_10000015 | 3300013308 | Bacteria | 308254 |
| 87 | Ga0157375_10074457 | 3300013308 | Bacteria | 3417 |
| 88 | Ga0163163_10000036 | 3300014325 | Bacteria | 156659 |
| 89 | Ga0157377_10013816 | 3300014745 | Bacteria | 4094 |
| 90 | Ga0207645_10006920 | 3300025907 | Bacteria | 8082 |
| 91 | Ga0207662_10005172 | 3300025918 | Bacteria | 6924 |
| 92 | Ga0207646_10010686 | 3300025922 | Bacteria | 8937 |
| 93 | Ga0207650_10029175 | 3300025925 | Unclassified | 3963 |
| 94 | Ga0207650_10056104 | 3300025925 | Unclassified | 2926 |
| 95 | Ga0207659_10011583 | 3300025926 | Bacteria | 5577 |
| 96 | Ga0207687_10000002 | 3300025927 | Bacteria | 975489 |
| 97 | Ga0207687_10000215 | 3300025927 | Bacteria | 39255 |
| 98 | Ga0207690_10015615 | 3300025932 | Unclassified | 4605 |
| 99 | Ga0207686_10014850 | 3300025934 | Bacteria | 4347 |
| 100 | Ga0207670_10037233 | 3300025936 | Bacteria | 3169 |
| 101 | Ga0207691_10000262 | 3300025940 | Bacteria | 52056 |
| 102 | Ga0207691_10012736 | 3300025940 | Bacteria | 8055 |
| 103 | Ga0207712_10012971 | 3300025961 | Bacteria | 5336 |
| 104 | Ga0207640_10009278 | 3300025981 | Bacteria | 5503 |
| 105 | Ga0207677_10000002 | 3300026023 | Bacteria | 478921 |
| 106 | Ga0207677_10000057 | 3300026023 | Bacteria | 97301 |
| 107 | Ga0207703_10001327 | 3300026035 | Bacteria | 22684 |
| 108 | Ga0207703_10057004 | 3300026035 | Unclassified | 3184 |
| 109 | Ga0207676_10040843 | 3300026095 | Bacteria | 3558 |
| 110 | Ga0207675_100002545 | 3300026118 | Bacteria | 18051 |
| 111 | Ga0207675_100068387 | 3300026118 | Bacteria | 3319 |
| 112 | Ga0207683_10102471 | 3300026121 | Bacteria | 2556 |
| 113 | Ga0207428_10001630 | 3300027907 | Bacteria | 23315 |
| 114 | Ga0207428_10002096 | 3300027907 | Bacteria | 20101 |
| 115 | Ga0207428_10012136 | 3300027907 | Bacteria | 7581 |
| 116 | Ga0207428_10068900 | 3300027907 | Bacteria | 2782 |
| 117 | Ga0307511_10008775 | 3300030521 | Bacteria | 10098 |
| 118 | Ga0307408_100004992 | 3300031548 | Bacteria | 8908 |
| 119 | Ga0307410_10023388 | 3300031852 | Unclassified | 3840 |
| 120 | Ga0307406_10038084 | 3300031901 | Bacteria | 2975 |
| 121 | Ga0307416_100025300 | 3300032002 | Bacteria | 4349 |
| 122 | Ga0307416_100031195 | 3300032002 | Unclassified | 4008 |
| 123 | Ga0373934_0000451 | 3300035086 | Bacteria | 14368 |
| 124 | Ga0373932_0000495 | 3300035112 | Bacteria | 12136 |
| 125 | Ga0373957_0007568 | 3300035120 | Bacteria | 3480 |
| 126 | Ga0373955_0001561 | 3300035172 | Bacteria | 9788 |
| 127 | Ga0373937_0000120 | 3300036401 | Bacteria | 74752 |
| 128 | Ga0395905_0010688 | 3300037471 | Bacteria | 8903 |
| 129 | Ga0451853_0262983 | 3300041512 | Bacteria | 25811 |
| 130 | Ga0439464_0000364 | 3300042439 | Bacteria | 8810 |
| 131 | Ga0451577_0000512 | 3300042876 | Bacteria | 64965 |
| 132 | Ga0453684_0000355 | 3300044712 | Bacteria | 189850 |
| 133 | Ga0451576_0006270 | 3300045051 | Bacteria | 14633 |
| 134 | Ga0495592_0074068 | 3300046454 | Bacteria | 2474 |
| 135 | Ga0495643_0003919 | 3300046522 | Bacteria | 10662 |
| 136 | Ga0496104_0043917 | 3300048907 | Bacteria | 4199 |
| 137 | Ga0496106_0106577 | 3300048909 | Bacteria | 2179 |
| 138 | Ga0496109_0006619 | 3300048912 | Bacteria | 9759 |
| 139 | Ga0496112_0039559 | 3300048915 | Bacteria | 4609 |
| 140 | Ga0501032_0000238 | 3300049569 | Bacteria | 45642 |
| 141 | Ga0501034_0001634 | 3300049571 | Bacteria | 29009 |
| 142 | Ga0501034_0005205 | 3300049571 | Bacteria | 14274 |
| 143 | Ga0501034_0039216 | 3300049571 | Bacteria | 4798 |
| 144 | Ga0501034_0042328 | 3300049571 | Bacteria | 4611 |
| 145 | Ga0501038_0005971 | 3300049574 | Bacteria | 11263 |
| 146 | Ga0501039_0002870 | 3300049575 | Bacteria | 12893 |
| 147 | Ga0501039_0032977 | 3300049575 | Bacteria | 3995 |
| 148 | Ga0501041_0033925 | 3300049577 | Unclassified | 3089 |
| 149 | Ga0501043_0002272 | 3300049579 | Bacteria | 16347 |
| 150 | Ga0501043_0029515 | 3300049579 | Bacteria | 4309 |
| 151 | Ga0501046_0004789 | 3300049580 | Bacteria | 12200 |
| 152 | Ga0501047_0008596 | 3300049581 | Bacteria | 9640 |
| 153 | Ga0501047_0008814 | 3300049581 | Bacteria | 9518 |
| 154 | Ga0501047_0016735 | 3300049581 | Bacteria | 7005 |
| 155 | Ga0501067_0019569 | 3300049583 | Bacteria | 3749 |
| 156 | Ga0501068_0012279 | 3300049584 | Bacteria | 4848 |
| 157 | Ga0501071_0023512 | 3300049587 | Bacteria | 4305 |
| 158 | Ga0501072_0058960 | 3300049588 | Unclassified | 3026 |
| 159 | Ga0501073_0007486 | 3300049589 | Bacteria | 8113 |
| 160 | Ga0501073_0018826 | 3300049589 | Bacteria | 4990 |
| 161 | Ga0501073_0062467 | 3300049589 | Bacteria | 2598 |
| 162 | Ga0501075_0097593 | 3300049591 | Unclassified | 2230 |
| 163 | Ga0501077_0042462 | 3300049593 | Unclassified | 2891 |
| 164 | Ga0501080_0009985 | 3300049742 | Bacteria | 8677 |
| 165 | Ga0501083_0000121 | 3300049744 | Bacteria | 53284 |
| 166 | Ga0501035_0012684 | 3300049822 | Bacteria | 7788 |
| 167 | Ga0501044_0010649 | 3300049823 | Bacteria | 9978 |
| 168 | Ga0501045_0049741 | 3300049824 | Bacteria | 3057 |
| 169 | nmdc:mga0k408_10188_c1 | 3300050493 | Bacteria | 5081 |
| 170 | nmdc:mga0k408_10777_c1 | 3300050493 | Bacteria | 4311 |
| 171 | nmdc:mga0k408_1626_c1 | 3300050493 | Bacteria | 12154 |
| 172 | nmdc:mga06z11_17092_c1 | 3300050494 | Bacteria | 3284 |
| 173 | nmdc:mga05p37_1938_c1 | 3300050507 | Bacteria | 24101 |
| 174 | nmdc:mga05p37_197507_c1 | 3300050507 | Bacteria | 2439 |
| 175 | nmdc:mga05p37_2137_c1 | 3300050507 | Bacteria | 23077 |
| 176 | nmdc:mga05p37_403_c1 | 3300050507 | Bacteria | 46883 |
| 177 | nmdc:mga05p37_44980_c1 | 3300050507 | Bacteria | 5431 |
| 178 | nmdc:mga05p37_8989_c2 | 3300050507 | Unclassified | 3361 |
| 179 | nmdc:mga0qj67_2107_c1 | 3300050509 | Bacteria | 14176 |
| 180 | nmdc:mga06r32_1036_c1 | 3300050510 | Bacteria | 25069 |
| 181 | nmdc:mga06r32_17446_c1 | 3300050510 | Bacteria | 6552 |
| 182 | nmdc:mga06r32_18288_c1 | 3300050510 | Bacteria | 6415 |
| 183 | nmdc:mga06r32_21730_c1 | 3300050510 | Bacteria | 5925 |
| 184 | nmdc:mga08y16_10244_c1 | 3300050511 | Bacteria | 9837 |
| 185 | nmdc:mga08y16_108344_c1 | 3300050511 | Bacteria | 2892 |
| 186 | nmdc:mga08y16_1864_c1 | 3300050511 | Bacteria | 21429 |
| 187 | nmdc:mga08y16_4394_c1 | 3300050511 | Bacteria | 14734 |
| 188 | nmdc:mga08y16_466_c1 | 3300050511 | Bacteria | 37656 |
| 189 | nmdc:mga08x19_7334_c1 | 3300050514 | Bacteria | 6551 |
| 190 | nmdc:mga0a205_100613_c1 | 3300050515 | Bacteria | 2789 |
| 191 | nmdc:mga0a205_37850_c1 | 3300050515 | Bacteria | 4639 |
| 192 | Ga0500559_0000645 | 3300053136 | Bacteria | 23521 |
| 193 | Ga0500568_0001131 | 3300053139 | Bacteria | 17917 |
| 194 | Ga0501084_0051293 | 3300054114 | Unclassified | 3453 |
| 195 | Ga0501084_0055988 | 3300054114 | Unclassified | 3299 |
| 196 | Ga0590071_000131 | 3300059421 | Bacteria | 20987 |
| 197 | Ga0590071_000784 | 3300059421 | Bacteria | 8895 |
| 198 | Ga0590074_000805 | 3300059423 | Bacteria | 4836 |
| 199 | Ga0590075_000277 | 3300059424 | Bacteria | 14510 |
| 200 | Ga0590075_000359 | 3300059424 | Bacteria | 12620 |
| 201 | Ga0590075_004644 | 3300059424 | Bacteria | 3252 |
| 202 | Ga0590077_000118 | 3300059426 | Bacteria | 21266 |
| 203 | Ga0590077_000620 | 3300059426 | Bacteria | 9548 |
| 204 | Ga0501082_0020783 | 3300060353 | Bacteria | 5660 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049579 | Ga0501043_0002272 | Ga0501043_0002272_9988_12357 | 520 |
| 2 | 3300049581 | Ga0501047_0008814 | Ga0501047_0008814_3192_5561 | 520 |
| 3 | 3300049583 | Ga0501067_0019569 | Ga0501067_0019569_1177_3633 | 526 |
| 4 | 3300049569 | Ga0501032_0000238 | Ga0501032_0000238_22663_25119 | 530 |
| 5 | 3300049571 | Ga0501034_0001634 | Ga0501034_0001634_5878_8334 | 530 |
| 6 | 3300049574 | Ga0501038_0005971 | Ga0501038_0005971_3312_5768 | 530 |
| 7 | 3300049575 | Ga0501039_0002870 | Ga0501039_0002870_8779_11235 | 530 |
| 8 | 3300049579 | Ga0501043_0029515 | Ga0501043_0029515_1806_4262 | 530 |
| 9 | 3300049580 | Ga0501046_0004789 | Ga0501046_0004789_9225_11681 | 530 |
| 10 | 3300049581 | Ga0501047_0016735 | Ga0501047_0016735_1512_3968 | 530 |
| 11 | 3300049584 | Ga0501068_0012279 | Ga0501068_0012279_1055_3511 | 530 |
| 12 | 3300049589 | Ga0501073_0062467 | Ga0501073_0062467_88_2544 | 530 |
| 13 | 3300049742 | Ga0501080_0009985 | Ga0501080_0009985_3184_5640 | 530 |
| 14 | 3300049822 | Ga0501035_0012684 | Ga0501035_0012684_2984_5440 | 530 |
| 15 | 3300049823 | Ga0501044_0010649 | Ga0501044_0010649_1970_4426 | 530 |
| 16 | 3300049575 | Ga0501039_0032977 | Ga0501039_0032977_1550_3871 | 533 |
| 17 | 3300060353 | Ga0501082_0020783 | Ga0501082_0020783_1041_3362 | 533 |
| 18 | 3300035112 | Ga0373932_0000495 | Ga0373932_0000495_3599_5629 | 548 |
| 19 | 3300009098 | Ga0105245_10000119 | Ga0105245_1000011937 | 551 |
| 20 | 3300025927 | Ga0207687_10000215 | Ga0207687_1000021535 | 551 |
| 21 | 3300049571 | Ga0501034_0039216 | Ga0501034_0039216_38_2407 | 558 |
| 22 | 3300030521 | Ga0307511_10008775 | Ga0307511_100087752 | 559 |
| 23 | 3300005338 | Ga0068868_100000010 | Ga0068868_10000001038 | 563 |
| 24 | 3300026023 | Ga0207677_10000057 | Ga0207677_1000005755 | 563 |
| 25 | 3300041512 | Ga0451853_0262983 | Ga0451853_0262983_6255_8711 | 566 |
| 26 | 3300053136 | Ga0500559_0000645 | Ga0500559_0000645_21222_23486 | 570 |
| 27 | 3300005842 | Ga0068858_100031356 | Ga0068858_1000313565 | 575 |
| 28 | 3300025907 | Ga0207645_10006920 | Ga0207645_100069201 | 575 |
| 29 | 3300009098 | Ga0105245_10000003 | Ga0105245_10000003253 | 576 |
| 30 | 3300025927 | Ga0207687_10000002 | Ga0207687_10000002250 | 576 |
| 31 | 3300013297 | Ga0157378_10000027 | Ga0157378_1000002722 | 577 |
| 32 | 3300013297 | Ga0157378_10000038 | Ga0157378_1000003821 | 577 |
| 33 | 3300013308 | Ga0157375_10000015 | Ga0157375_10000015143 | 577 |
| 34 | 3300005543 | Ga0070672_100000096 | Ga0070672_10000009618 | 578 |
| 35 | 3300013308 | Ga0157375_10000013 | Ga0157375_10000013192 | 578 |
| 36 | 3300025940 | Ga0207691_10000262 | Ga0207691_1000026230 | 578 |
| 37 | 3300005337 | Ga0070682_100000006 | Ga0070682_100000006230 | 579 |
| 38 | 3300005338 | Ga0068868_100002859 | Ga0068868_1000028592 | 580 |
| 39 | 3300026023 | Ga0207677_10000002 | Ga0207677_1000000244 | 580 |
| 40 | 3300037471 | Ga0395905_0010688 | Ga0395905_0010688_1534_3972 | 581 |
| 41 | 3300049589 | Ga0501073_0018826 | Ga0501073_0018826_2008_4458 | 584 |
| 42 | 3300005842 | Ga0068858_100013189 | Ga0068858_1000131892 | 585 |
| 43 | 3300026035 | Ga0207703_10001327 | Ga0207703_100013272 | 585 |
| 44 | 3300049571 | Ga0501034_0042328 | Ga0501034_0042328_592_2988 | 585 |
| 45 | 3300005331 | Ga0070670_100001133 | Ga0070670_10000113314 | 587 |
| 46 | 3300005353 | Ga0070669_100058271 | Ga0070669_1000582712 | 587 |
| 47 | 3300025925 | Ga0207650_10056104 | Ga0207650_100561042 | 587 |
| 48 | 3300026095 | Ga0207676_10040843 | Ga0207676_100408433 | 589 |
| 49 | 3300042876 | Ga0451577_0000512 | Ga0451577_0000512_59384_61774 | 591 |
| 50 | 3300044712 | Ga0453684_0000355 | Ga0453684_0000355_146066_148456 | 591 |
| 51 | 3300049744 | Ga0501083_0000121 | Ga0501083_0000121_47791_50142 | 591 |
| 52 | 3300006038 | Ga0075365_10028537 | Ga0075365_100285371 | 592 |
| 53 | 3300050515 | nmdc:mga0a205_100613_c1 | nmdc:mga0a205_100613_c1_445_2745 | 592 |
| 54 | 3300009094 | Ga0111539_10007966 | Ga0111539_100079664 | 593 |
| 55 | 3300005366 | Ga0070659_100031089 | Ga0070659_1000310892 | 594 |
| 56 | 3300025932 | Ga0207690_10015615 | Ga0207690_100156152 | 594 |
| 57 | 3300050514 | nmdc:mga08x19_7334_c1 | nmdc:mga08x19_7334_c1_497_2920 | 594 |
| 58 | 3300005548 | Ga0070665_100013217 | Ga0070665_1000132172 | 595 |
| 59 | 3300006844 | Ga0075428_100006174 | Ga0075428_10000617411 | 595 |
| 60 | 3300059421 | Ga0590071_000784 | Ga0590071_000784_2409_4754 | 595 |
| 61 | 3300059424 | Ga0590075_000359 | Ga0590075_000359_8273_10618 | 595 |
| 62 | 3300059426 | Ga0590077_000118 | Ga0590077_000118_16194_18539 | 595 |
| 63 | 3300006844 | Ga0075428_100015766 | Ga0075428_1000157662 | 596 |
| 64 | 3300006847 | Ga0075431_100012682 | Ga0075431_1000126824 | 596 |
| 65 | 3300009147 | Ga0114129_10049526 | Ga0114129_100495262 | 596 |
| 66 | 3300025981 | Ga0207640_10009278 | Ga0207640_100092782 | 596 |
| 67 | 3300045051 | Ga0451576_0006270 | Ga0451576_0006270_12658_14577 | 596 |
| 68 | 3300050510 | nmdc:mga06r32_21730_c1 | nmdc:mga06r32_21730_c1_2119_4374 | 596 |
| 69 | 3300006042 | Ga0075368_10007173 | Ga0075368_100071732 | 597 |
| 70 | 3300006847 | Ga0075431_100121806 | Ga0075431_1001218062 | 597 |
| 71 | 3300050493 | nmdc:mga0k408_10777_c1 | nmdc:mga0k408_10777_c1_186_2591 | 597 |
| 72 | 3300009094 | Ga0111539_10006715 | Ga0111539_100067154 | 598 |
| 73 | 3300009147 | Ga0114129_10001036 | Ga0114129_100010368 | 598 |
| 74 | 3300009147 | Ga0114129_10027273 | Ga0114129_100272733 | 598 |
| 75 | 3300027907 | Ga0207428_10012136 | Ga0207428_100121363 | 598 |
| 76 | 3300027907 | Ga0207428_10068900 | Ga0207428_100689001 | 598 |
| 77 | 3300050507 | nmdc:mga05p37_403_c1 | nmdc:mga05p37_403_c1_28601_30958 | 598 |
| 78 | 3300050511 | nmdc:mga08y16_4394_c1 | nmdc:mga08y16_4394_c1_9540_11894 | 598 |
| 79 | 3300005340 | Ga0070689_100012086 | Ga0070689_1000120862 | 599 |
| 80 | 3300005347 | Ga0070668_100004732 | Ga0070668_1000047322 | 599 |
| 81 | 3300005356 | Ga0070674_100017866 | Ga0070674_1000178662 | 599 |
| 82 | 3300005367 | Ga0070667_100021331 | Ga0070667_1000213311 | 599 |
| 83 | 3300005459 | Ga0068867_100011307 | Ga0068867_1000113072 | 599 |
| 84 | 3300005617 | Ga0068859_100045091 | Ga0068859_1000450912 | 599 |
| 85 | 3300006852 | Ga0075433_10043460 | Ga0075433_100434602 | 599 |
| 86 | 3300006931 | Ga0097620_100045090 | Ga0097620_1000450902 | 599 |
| 87 | 3300013308 | Ga0157375_10074457 | Ga0157375_100744572 | 599 |
| 88 | 3300025918 | Ga0207662_10005172 | Ga0207662_100051724 | 599 |
| 89 | 3300025936 | Ga0207670_10037233 | Ga0207670_100372332 | 599 |
| 90 | 3300025940 | Ga0207691_10012736 | Ga0207691_100127364 | 599 |
| 91 | 3300026118 | Ga0207675_100002545 | Ga0207675_1000025455 | 599 |
| 92 | 3300026121 | Ga0207683_10102471 | Ga0207683_101024712 | 599 |
| 93 | 3300048907 | Ga0496104_0043917 | Ga0496104_0043917_854_3205 | 599 |
| 94 | 3300048909 | Ga0496106_0106577 | Ga0496106_0106577_54_2165 | 599 |
| 95 | 3300048915 | Ga0496112_0039559 | Ga0496112_0039559_388_2739 | 599 |
| 96 | 3300049571 | Ga0501034_0005205 | Ga0501034_0005205_5163_7523 | 599 |
| 97 | 3300050494 | nmdc:mga06z11_17092_c1 | nmdc:mga06z11_17092_c1_27_2432 | 599 |
| 98 | 3300005331 | Ga0070670_100001952 | Ga0070670_1000019524 | 600 |
| 99 | 3300005614 | Ga0068856_100040301 | Ga0068856_1000403012 | 600 |
| 100 | 3300006195 | Ga0075366_10011337 | Ga0075366_100113375 | 600 |
| 101 | 3300006844 | Ga0075428_100013300 | Ga0075428_1000133003 | 600 |
| 102 | 3300006846 | Ga0075430_100029676 | Ga0075430_1000296762 | 600 |
| 103 | 3300006880 | Ga0075429_100007576 | Ga0075429_1000075769 | 600 |
| 104 | 3300009147 | Ga0114129_10149012 | Ga0114129_101490121 | 600 |
| 105 | 3300049588 | Ga0501072_0058960 | Ga0501072_0058960_316_2547 | 600 |
| 106 | 3300049593 | Ga0501077_0042462 | Ga0501077_0042462_266_2575 | 600 |
| 107 | 3300049824 | Ga0501045_0049741 | Ga0501045_0049741_406_2739 | 600 |
| 108 | 3300050493 | nmdc:mga0k408_10188_c1 | nmdc:mga0k408_10188_c1_2604_5009 | 600 |
| 109 | 3300050507 | nmdc:mga05p37_197507_c1 | nmdc:mga05p37_197507_c1_13_2298 | 600 |
| 110 | 3300050510 | nmdc:mga06r32_18288_c1 | nmdc:mga06r32_18288_c1_2651_4864 | 600 |
| 111 | 3300054114 | Ga0501084_0051293 | Ga0501084_0051293_399_2630 | 600 |
| 112 | 3300054114 | Ga0501084_0055988 | Ga0501084_0055988_686_2995 | 600 |
| 113 | 3300005338 | Ga0068868_100017048 | Ga0068868_1000170484 | 601 |
| 114 | 3300005353 | Ga0070669_100001112 | Ga0070669_1000011122 | 601 |
| 115 | 3300005577 | Ga0068857_100018230 | Ga0068857_1000182302 | 601 |
| 116 | 3300005844 | Ga0068862_100028216 | Ga0068862_1000282162 | 601 |
| 117 | 3300006852 | Ga0075433_10042919 | Ga0075433_100429192 | 601 |
| 118 | 3300009147 | Ga0114129_10003143 | Ga0114129_100031436 | 601 |
| 119 | 3300009147 | Ga0114129_10010319 | Ga0114129_100103192 | 601 |
| 120 | 3300009176 | Ga0105242_10008060 | Ga0105242_100080605 | 601 |
| 121 | 3300009177 | Ga0105248_10080273 | Ga0105248_100802732 | 601 |
| 122 | 3300009553 | Ga0105249_10012624 | Ga0105249_100126245 | 601 |
| 123 | 3300025934 | Ga0207686_10014850 | Ga0207686_100148503 | 601 |
| 124 | 3300025961 | Ga0207712_10012971 | Ga0207712_100129714 | 601 |
| 125 | 3300050507 | nmdc:mga05p37_2137_c1 | nmdc:mga05p37_2137_c1_4319_6691 | 601 |
| 126 | 3300050507 | nmdc:mga05p37_44980_c1 | nmdc:mga05p37_44980_c1_634_2820 | 601 |
| 127 | 3300005290 | Ga0065712_10000535 | Ga0065712_100005359 | 602 |
| 128 | 3300009094 | Ga0111539_10017180 | Ga0111539_100171802 | 602 |
| 129 | 3300046522 | Ga0495643_0003919 | Ga0495643_0003919_7693_10011 | 602 |
| 130 | 3300048912 | Ga0496109_0006619 | Ga0496109_0006619_5296_7677 | 602 |
| 131 | 3300049589 | Ga0501073_0007486 | Ga0501073_0007486_3235_5559 | 602 |
| 132 | 3300050511 | nmdc:mga08y16_108344_c1 | nmdc:mga08y16_108344_c1_260_2614 | 602 |
| 133 | 3300050515 | nmdc:mga0a205_37850_c1 | nmdc:mga0a205_37850_c1_2067_4370 | 602 |
| 134 | 3300003203 | JGI25406J46586_10003563 | JGI25406J46586_100035632 | 603 |
| 135 | 3300005343 | Ga0070687_100013512 | Ga0070687_1000135122 | 603 |
| 136 | 3300005354 | Ga0070675_100061032 | Ga0070675_1000610322 | 603 |
| 137 | 3300005985 | Ga0081539_10000134 | Ga0081539_10000134152 | 603 |
| 138 | 3300006844 | Ga0075428_100002414 | Ga0075428_1000024149 | 603 |
| 139 | 3300006880 | Ga0075429_100004168 | Ga0075429_10000416810 | 603 |
| 140 | 3300009094 | Ga0111539_10002069 | Ga0111539_100020697 | 603 |
| 141 | 3300009147 | Ga0114129_10001729 | Ga0114129_1000172912 | 603 |
| 142 | 3300009147 | Ga0114129_10103421 | Ga0114129_101034212 | 603 |
| 143 | 3300027907 | Ga0207428_10001630 | Ga0207428_1000163013 | 603 |
| 144 | 3300031548 | Ga0307408_100004992 | Ga0307408_1000049923 | 603 |
| 145 | 3300031901 | Ga0307406_10038084 | Ga0307406_100380842 | 603 |
| 146 | 3300032002 | Ga0307416_100025300 | Ga0307416_1000253002 | 603 |
| 147 | 3300042439 | Ga0439464_0000364 | Ga0439464_0000364_4693_7080 | 603 |
| 148 | 3300049587 | Ga0501071_0023512 | Ga0501071_0023512_323_2647 | 603 |
| 149 | 3300049591 | Ga0501075_0097593 | Ga0501075_0097593_20_2065 | 603 |
| 150 | 3300050507 | nmdc:mga05p37_1938_c1 | nmdc:mga05p37_1938_c1_2796_5183 | 603 |
| 151 | 3300050509 | nmdc:mga0qj67_2107_c1 | nmdc:mga0qj67_2107_c1_7521_9908 | 603 |
| 152 | 3300050510 | nmdc:mga06r32_17446_c1 | nmdc:mga06r32_17446_c1_2126_4513 | 603 |
| 153 | 3300050511 | nmdc:mga08y16_1864_c1 | nmdc:mga08y16_1864_c1_10765_13152 | 603 |
| 154 | 3300005444 | Ga0070694_100040303 | Ga0070694_1000403032 | 604 |
| 155 | 3300005468 | Ga0070707_100042252 | Ga0070707_1000422522 | 604 |
| 156 | 3300005545 | Ga0070695_100002313 | Ga0070695_1000023138 | 604 |
| 157 | 3300005719 | Ga0068861_100037435 | Ga0068861_1000374352 | 604 |
| 158 | 3300014325 | Ga0163163_10000036 | Ga0163163_1000003644 | 604 |
| 159 | 3300026035 | Ga0207703_10057004 | Ga0207703_100570042 | 604 |
| 160 | 3300027907 | Ga0207428_10002096 | Ga0207428_100020964 | 604 |
| 161 | 3300035086 | Ga0373934_0000451 | Ga0373934_0000451_7107_9482 | 604 |
| 162 | 3300035120 | Ga0373957_0007568 | Ga0373957_0007568_788_3163 | 604 |
| 163 | 3300035172 | Ga0373955_0001561 | Ga0373955_0001561_4121_6496 | 604 |
| 164 | 3300036401 | Ga0373937_0000120 | Ga0373937_0000120_47391_49766 | 604 |
| 165 | 3300050493 | nmdc:mga0k408_1626_c1 | nmdc:mga0k408_1626_c1_6765_9122 | 604 |
| 166 | 3300050511 | nmdc:mga08y16_10244_c1 | nmdc:mga08y16_10244_c1_588_2945 | 604 |
| 167 | 3300050511 | nmdc:mga08y16_466_c1 | nmdc:mga08y16_466_c1_27196_29616 | 604 |
| 168 | 3300059424 | Ga0590075_004644 | Ga0590075_004644_699_3017 | 604 |
| 169 | 3300005844 | Ga0068862_100034934 | Ga0068862_1000349343 | 605 |
| 170 | 3300014745 | Ga0157377_10013816 | Ga0157377_100138162 | 605 |
| 171 | 3300006847 | Ga0075431_100004654 | Ga0075431_1000046545 | 606 |
| 172 | 3300009147 | Ga0114129_10061663 | Ga0114129_100616632 | 606 |
| 173 | 3300025922 | Ga0207646_10010686 | Ga0207646_100106863 | 606 |
| 174 | 3300049581 | Ga0501047_0008596 | Ga0501047_0008596_1533_3833 | 606 |
| 175 | 3300050510 | nmdc:mga06r32_1036_c1 | nmdc:mga06r32_1036_c1_22727_25051 | 606 |
| 176 | 3300003203 | JGI25406J46586_10003701 | JGI25406J46586_100037012 | 607 |
| 177 | 3300005354 | Ga0070675_100023457 | Ga0070675_1000234572 | 607 |
| 178 | 3300005617 | Ga0068859_100013774 | Ga0068859_1000137742 | 607 |
| 179 | 3300005985 | Ga0081539_10002993 | Ga0081539_1000299312 | 607 |
| 180 | 3300006931 | Ga0097620_100013774 | Ga0097620_1000137742 | 607 |
| 181 | 3300025926 | Ga0207659_10011583 | Ga0207659_100115832 | 607 |
| 182 | 3300031852 | Ga0307410_10023388 | Ga0307410_100233882 | 607 |
| 183 | 3300032002 | Ga0307416_100031195 | Ga0307416_1000311953 | 607 |
| 184 | 3300046454 | Ga0495592_0074068 | Ga0495592_0074068_115_2391 | 607 |
| 185 | 3300049577 | Ga0501041_0033925 | Ga0501041_0033925_670_3018 | 607 |
| 186 | 3300050507 | nmdc:mga05p37_8989_c2 | nmdc:mga05p37_8989_c2_461_2788 | 607 |
| 187 | 3300053139 | Ga0500568_0001131 | Ga0500568_0001131_9823_12261 | 607 |
| 188 | 3300059421 | Ga0590071_000131 | Ga0590071_000131_15273_17567 | 607 |
| 189 | 3300059423 | Ga0590074_000805 | Ga0590074_000805_2006_4390 | 607 |
| 190 | 3300059424 | Ga0590075_000277 | Ga0590075_000277_11535_13919 | 607 |
| 191 | 3300059426 | Ga0590077_000620 | Ga0590077_000620_2016_4400 | 607 |
| 192 | 3300005458 | Ga0070681_10078307 | Ga0070681_100783072 | 608 |
| 193 | 3300005471 | Ga0070698_100011932 | Ga0070698_1000119322 | 608 |
| 194 | 3300005518 | Ga0070699_100049147 | Ga0070699_1000491472 | 608 |
| 195 | 3300005536 | Ga0070697_100023868 | Ga0070697_1000238682 | 608 |
| 196 | 3300005617 | Ga0068859_100080501 | Ga0068859_1000805012 | 608 |
| 197 | 3300006931 | Ga0097620_100080500 | Ga0097620_1000805002 | 608 |
| 198 | 3300009098 | Ga0105245_10041354 | Ga0105245_100413542 | 608 |
| 199 | 3300005331 | Ga0070670_100016860 | Ga0070670_1000168602 | 609 |
| 200 | 3300005618 | Ga0068864_100000689 | Ga0068864_10000068921 | 609 |
| 201 | 3300025925 | Ga0207650_10029175 | Ga0207650_100291752 | 609 |
| 202 | 2162886012 | MBSR1b_contig_14354628 | MBSR1b_0414.00006520 | 614 |
| 203 | 3300005293 | Ga0065715_10089438 | Ga0065715_100894382 | 614 |
| 204 | 3300026118 | Ga0207675_100068387 | Ga0207675_1000683872 | 614 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2oqo-assembly1.cif.gz_A-2 | crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis | 0.8973 | 2 | 110 |
| 3d3h-assembly1.cif.gz_A-2 | crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a | 0.896 | 1 | 110 |
| 3nb6-assembly1.cif.gz_A-2 | crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with methylphosphoryl neryl moenomycin | 0.8918 | 1 | 110 |
| 3nb7-assembly1.cif.gz_A-2 | crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with decarboxylated neryl moenomycin | 0.8891 | 1 | 110 |
| 3vmq-assembly1.cif.gz_A | crystal structure of staphylococcus aureus membrane-bound transglycosylase: apoenzyme | 0.8738 | 3 | 109 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P76577_56_250_1.10.3810.10 | Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like | 0.8974 | 4 | 116 | 1.10.3810.10 |
| 3d3hA00 | Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like | 0.896 | 1 | 110 | 1.10.3810.10 |
| 2olvA02 | Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like | 0.8864 | 4 | 116 | 1.10.3810.10 |
| af_P76577_253_589_3.40.710.10 | Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily | 0.8837 | 122 | 473 | 3.40.710.10 |
| af_Q2FXJ4_86_294_1.10.3810.10 | Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like | 0.8795 | 2 | 112 | 1.10.3810.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A257IW99-F1-model_v4 | Penicillin-binding protein 1C | 0.937 | 109 | 409 |
GO:0008658
GO:0008955 GO:0009252 GO:0030288 |
| AF-K1YYL1-F1-model_v4 | Penicillin-binding protein transpeptidase domain-containing protein | 0.9354 | 207 | 431 |
GO:0008658
GO:0008955 GO:0009252 GO:0030288 |
| AF-X0WZY2-F1-model_v4 | peptidoglycan glycosyltransferase (EC 2.4.99.28) | 0.9353 | 198 | 427 |
GO:0008658
GO:0008955 GO:0009252 GO:0030288 |
| AF-A0A383EL57-F1-model_v4 | Penicillin-binding protein transpeptidase domain-containing protein | 0.9324 | 172 | 330 |
GO:0008360
GO:0008658 GO:0008955 GO:0009252 GO:0030288 GO:0071555 |
| AF-A0A418H7B8-F1-model_v4 | deleted | 0.9302 | 172 | 344 |
|
Predicted Structure (AlphaFold2)
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