F312224

General Info

Members Datasets Scaffolds Average Seq Length
204 116 408 156

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100006554|Ga0070707_1000065543
Length 183
Sequence VRGSLNPGFRRDRCCSISSAMLLDDPRELRAAVAPGRRVMGLDVGTKTIGLALSDTRLVIASPLETIRRRRFREDVAALFALIEQHEVGGLVIGLPLSLAGTDSPRTQSVRQFARNLLALRDMPVALWDERLSTAAVTREMIAHDMTRKRRAEIVDRVAAAYILQGFLDAMNAAPADETRPTG

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
43 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
63 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
64 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
65 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
66 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
67 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
68 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
69 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
70 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
71 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
72 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
73 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
74 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
75 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
92 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
93 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
94 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
95 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
96 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
99 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
103 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
114 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
115 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
116 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.49
Nodule 0
Rhizoplane 2.45
Rhizosphere 86.76
Stem 0
Stem Tuber 0
Unclassified 3.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100006554 3300005468 Bacteria 10800
2 Ga0070690_100135404 3300005330 Bacteria 1668
3 Ga0070680_100544855 3300005336 Bacteria 994
4 Ga0070675_101077247 3300005354 Bacteria 739
5 Ga0070671_100054881 3300005355 Bacteria 3313
6 Ga0070674_100205947 3300005356 Bacteria 1522
7 Ga0070673_100582805 3300005364 Bacteria 1019
8 Ga0070714_100079712 3300005435 Bacteria 2847
9 Ga0070714_101344795 3300005435 Bacteria 697
10 Ga0070714_101754945 3300005435 Bacteria 606
11 Ga0070713_100166402 3300005436 Bacteria 1972
12 Ga0070713_100217467 3300005436 Bacteria 1732
13 Ga0070713_100410322 3300005436 Bacteria 1266
14 Ga0070710_10647391 3300005437 Bacteria 740
15 Ga0070710_10747956 3300005437 Bacteria 694
16 Ga0070710_10881500 3300005437 Bacteria 645
17 Ga0070711_100144432 3300005439 Bacteria 1788
18 Ga0070681_10036226 3300005458 Bacteria 4955
19 Ga0070681_10599252 3300005458 Bacteria 1016
20 Ga0070681_11211012 3300005458 Bacteria 677
21 Ga0070685_10340267 3300005466 Bacteria 1023
22 Ga0070706_100138220 3300005467 Bacteria 2274
23 Ga0070706_100195309 3300005467 Bacteria 1890
24 Ga0070706_100465003 3300005467 Bacteria 1177
25 Ga0070698_100008225 3300005471 Bacteria 11284
26 Ga0070698_100694134 3300005471 Bacteria 960
27 Ga0070679_101285290 3300005530 Bacteria 677
28 Ga0070679_101770211 3300005530 Bacteria 566
29 Ga0070684_100168915 3300005535 Bacteria 1986
30 Ga0070684_100189315 3300005535 Bacteria 1872
31 Ga0070697_100111262 3300005536 Bacteria 2283
32 Ga0070697_100676555 3300005536 Bacteria 910
33 Ga0070697_100890195 3300005536 Bacteria 789
34 Ga0070695_100003688 3300005545 Bacteria 8923
35 Ga0070693_101274917 3300005547 Bacteria 567
36 Ga0068855_100124515 3300005563 Bacteria 2948
37 Ga0070664_100849397 3300005564 Bacteria 855
38 Ga0070664_100970811 3300005564 Bacteria 798
39 Ga0068856_100188827 3300005614 Bacteria 2074
40 Ga0068856_100375362 3300005614 Bacteria 1441
41 Ga0068861_100613821 3300005719 Bacteria 1000
42 Ga0070717_10272499 3300006028 Bacteria 1499
43 Ga0070717_10420360 3300006028 Bacteria 1202
44 Ga0070717_10875739 3300006028 Bacteria 817
45 Ga0070717_11036887 3300006028 Bacteria 747
46 Ga0070717_11091515 3300006028 Bacteria 727
47 Ga0070717_11153304 3300006028 Bacteria 705
48 Ga0070716_100034516 3300006173 Bacteria 2774
49 Ga0070712_100015890 3300006175 Bacteria 4853
50 Ga0070712_100549846 3300006175 Unclassified 973
51 Ga0075367_10054934 3300006178 Bacteria 2362
52 Ga0075434_101101978 3300006871 Bacteria 807
53 Ga0075434_101717678 3300006871 Bacteria 635
54 Ga0075436_100004781 3300006914 Bacteria 9303
55 Ga0075436_100166455 3300006914 Bacteria 1556
56 Ga0075435_100019682 3300007076 Bacteria 5160
57 Ga0075435_100150967 3300007076 Bacteria 1953
58 Ga0099795_10037549 3300007788 Bacteria 1705
59 Ga0099795_10038353 3300007788 Bacteria 1691
60 Ga0111539_10200775 3300009094 Bacteria 2325
61 Ga0114129_11280899 3300009147 Bacteria 909
62 Ga0105249_12417819 3300009553 Bacteria 598
63 Ga0099796_10074276 3300010159 Bacteria 1234
64 Ga0099796_10203637 3300010159 Bacteria 804
65 Ga0099796_10225953 3300010159 Bacteria 769
66 Ga0105239_11787041 3300010375 Bacteria 712
67 Ga0182008_10300567 3300014497 Bacteria 840
68 Ga0157379_10299493 3300014968 Bacteria 1465
69 Ga0157379_11355339 3300014968 Bacteria 688
70 Ga0213876_10046105 3300021384 Bacteria 2305
71 Ga0213875_10000259 3300021388 Bacteria 53341
72 Ga0213875_10000737 3300021388 Bacteria 24870
73 Ga0213875_10003971 3300021388 Bacteria 8248
74 Ga0213875_10224284 3300021388 Bacteria 885
75 Ga0213875_10282610 3300021388 Bacteria 784
76 Ga0213871_10065048 3300021441 Bacteria 1021
77 Ga0207673_1054893 3300025290 Bacteria 566
78 Ga0207692_10054450 3300025898 Bacteria 2043
79 Ga0207685_10082607 3300025905 Bacteria 1333
80 Ga0207699_10115503 3300025906 Bacteria 1727
81 Ga0207699_11111241 3300025906 Bacteria 585
82 Ga0207699_11125942 3300025906 Bacteria 581
83 Ga0207684_10052861 3300025910 Bacteria 3448
84 Ga0207707_11008573 3300025912 Bacteria 683
85 Ga0207693_10038468 3300025915 Bacteria 3768
86 Ga0207693_10224209 3300025915 Bacteria 1477
87 Ga0207663_10223112 3300025916 Bacteria 1372
88 Ga0207652_10104124 3300025921 Bacteria 2510
89 Ga0207652_11450647 3300025921 Bacteria 590
90 Ga0207646_10007303 3300025922 Bacteria 11261
91 Ga0207700_10011007 3300025928 Bacteria 5746
92 Ga0207700_10192082 3300025928 Bacteria 1716
93 Ga0207664_10175992 3300025929 Bacteria 1834
94 Ga0207664_10187996 3300025929 Bacteria 1777
95 Ga0207664_10375420 3300025929 Bacteria 1261
96 Ga0207664_10549368 3300025929 Bacteria 1036
97 Ga0207664_10857392 3300025929 Bacteria 816
98 Ga0207669_10865363 3300025937 Bacteria 753
99 Ga0207665_10034274 3300025939 Bacteria 3369
100 Ga0207689_10286352 3300025942 Bacteria 1364
101 Ga0207651_10115180 3300025960 Bacteria 2027
102 Ga0207702_10830158 3300026078 Bacteria 914
103 Ga0207702_11233059 3300026078 Bacteria 742
104 Ga0207428_10324620 3300027907 Bacteria 1136
105 Ga0268266_10836245 3300028379 Bacteria 890
106 Ga0265327_10000413 3300031251 Bacteria 78589
107 Ga0265327_10140397 3300031251 Bacteria 1129
108 Ga0373926_0044746 3300035083 Bacteria 1586
109 Ga0373934_0083340 3300035086 Bacteria 1285
110 Ga0373940_0049559 3300035088 Bacteria 1176
111 Ga0373944_0057061 3300035089 Bacteria 1244
112 Ga0373932_0062491 3300035112 Bacteria 1135
113 Ga0373941_0020340 3300035115 Bacteria 1859
114 Ga0373954_0082930 3300035118 Bacteria 1533
115 Ga0373954_0214563 3300035118 Bacteria 946
116 Ga0373956_0081052 3300035119 Bacteria 1489
117 Ga0373946_0017248 3300035171 Bacteria 2761
118 Ga0373955_0055082 3300035172 Bacteria 2177
119 Ga0373955_0056116 3300035172 Bacteria 2160
120 Ga0373942_0115186 3300035207 Bacteria 835
121 Ga0373924_0201331 3300035410 Bacteria 878
122 Ga0373931_0695774 3300035691 Bacteria 671
123 Ga0373935_0055760 3300035692 Bacteria 2518
124 Ga0373935_0600305 3300035692 Bacteria 805
125 Ga0373927_0110014 3300035695 Bacteria 1795
126 Ga0373933_0001346 3300035724 Bacteria 14485
127 Ga0373933_0122440 3300035724 Bacteria 1630
128 Ga0373947_0186949 3300035725 Bacteria 1351
129 Ga0373947_0248051 3300035725 Unclassified 1176
130 Ga0373937_0005365 3300036401 Bacteria 10965
131 Ga0373937_0071551 3300036401 Bacteria 3198
132 Ga0373937_0073938 3300036401 Bacteria 3144
133 Ga0373937_1157643 3300036401 Bacteria 722
134 Ga0373925_0436300 3300037068 Bacteria 1071
135 Ga0373925_0728071 3300037068 Bacteria 818
136 Ga0436364_0127138 3300037853 Bacteria 1040
137 Ga0436364_0136075 3300037853 Bacteria 831
138 Ga0436364_0290284 3300037853 Bacteria 48541
139 Ga0436364_0786531 3300037853 Bacteria 1032
140 Ga0436364_0793291 3300037853 Bacteria 27596
141 Ga0436364_0871988 3300037853 Bacteria 608
142 Ga0436364_1373616 3300037853 Bacteria 99108
143 Ga0436364_1553052 3300037853 Bacteria 707
144 Ga0436365_0592407 3300039437 Bacteria 2593
145 Ga0436365_1155698 3300039437 Bacteria 892
146 Ga0436365_1164143 3300039437 Bacteria 1165
147 Ga0436365_1840545 3300039437 Bacteria 2798
148 Ga0436365_1879365 3300039437 Bacteria 2573
149 Ga0436360_0414229 3300039438 Bacteria 2353
150 Ga0436360_0886986 3300039438 Unclassified 639
151 Ga0436360_1005997 3300039438 Bacteria 3368
152 Ga0436360_1046518 3300039438 Unclassified 1213
153 Ga0436361_0743500 3300039447 Bacteria 1873
154 Ga0436361_0855827 3300039447 Bacteria 4142
155 Ga0436361_0965042 3300039447 Bacteria 2668
156 Ga0436361_0977932 3300039447 Unclassified 580
157 Ga0436361_1031678 3300039447 Bacteria 2472
158 Ga0436363_1048007 3300039450 Unclassified 3139
159 Ga0436363_1592243 3300039450 Bacteria 708
160 Ga0436362_0052805 3300039453 Bacteria 2123
161 Ga0436362_0381493 3300039453 Bacteria 935
162 Ga0436362_0525796 3300039453 Unclassified 665
163 Ga0436362_0533305 3300039453 Bacteria 782
164 Ga0436362_1138524 3300039453 Bacteria 633
165 Ga0436362_1189589 3300039453 Bacteria 710
166 Ga0466963_0663389 3300044694 Bacteria 736
167 Ga0466963_0705899 3300044694 Bacteria 712
168 Ga0466958_0154169 3300045836 Bacteria 1450
169 Ga0495592_0075708 3300046454 Bacteria 2444
170 Ga0495580_0414532 3300046472 Bacteria 907
171 Ga0495639_0438288 3300046475 Bacteria 663
172 Ga0495662_0580806 3300046476 Bacteria 548
173 Ga0495584_0465031 3300046491 Bacteria 644
174 Ga0495594_0270786 3300046499 Bacteria 967
175 Ga0495618_0177730 3300046514 Bacteria 1353
176 Ga0495628_1195648 3300046516 Bacteria 516
177 Ga0495586_0017143 3300046535 Bacteria 3851
178 Ga0495587_0770631 3300046536 Bacteria 526
179 Ga0495667_0219248 3300046559 Bacteria 1214
180 Ga0495667_0778718 3300046559 Bacteria 590
181 Ga0495635_0038535 3300046663 Bacteria 3309
182 Ga0495599_0398964 3300046678 Bacteria 819
183 Ga0495658_0480039 3300046683 Bacteria 795
184 Ga0495600_0366654 3300046809 Bacteria 900
185 Ga0495600_0507460 3300046809 Bacteria 740
186 Ga0495604_0167397 3300047317 Bacteria 1549
187 Ga0495680_0162053 3300047322 Bacteria 1623
188 Ga0495680_0248587 3300047322 Bacteria 1261
189 Ga0495602_0240930 3300048088 Bacteria 1353
190 Ga0496104_0122440 3300048907 Bacteria 2497
191 Ga0496104_1295018 3300048907 Bacteria 632
192 Ga0496111_1277657 3300048914 Bacteria 518
193 Ga0496112_0091015 3300048915 Bacteria 3019
194 Ga0496112_1161521 3300048915 Bacteria 689
195 Ga0501080_0889220 3300049742 Bacteria 777
196 nmdc:mga08y16_427511_c1 3300050511 Bacteria 1353
197 nmdc:mga08x19_11373_c1 3300050514 Bacteria 5357
198 nmdc:mga08x19_14_c1 3300050514 Bacteria 365567
199 nmdc:mga08x19_57144_c1 3300050514 Bacteria 2520
200 Ga0495601_0021627 3300053077 Bacteria 3940
201 Ga0495601_0073791 3300053077 Bacteria 2182
202 Ga0495595_0146506 3300053084 Bacteria 1160
203 Ga0495619_0017025 3300053085 Bacteria 4607
204 Ga0495619_0028960 3300053085 Bacteria 3575
205 Ga0070707_100006554
206 Ga0070690_100135404
207 Ga0070680_100544855
208 Ga0070675_101077247
209 Ga0070671_100054881
210 Ga0070674_100205947
211 Ga0070673_100582805
212 Ga0070714_100079712
213 Ga0070714_101344795
214 Ga0070714_101754945
215 Ga0070713_100166402
216 Ga0070713_100217467
217 Ga0070713_100410322
218 Ga0070710_10647391
219 Ga0070710_10747956
220 Ga0070710_10881500
221 Ga0070711_100144432
222 Ga0070681_10036226
223 Ga0070681_10599252
224 Ga0070681_11211012
225 Ga0070685_10340267
226 Ga0070706_100138220
227 Ga0070706_100195309
228 Ga0070706_100465003
229 Ga0070698_100008225
230 Ga0070698_100694134
231 Ga0070679_101285290
232 Ga0070679_101770211
233 Ga0070684_100168915
234 Ga0070684_100189315
235 Ga0070697_100111262
236 Ga0070697_100676555
237 Ga0070697_100890195
238 Ga0070695_100003688
239 Ga0070693_101274917
240 Ga0068855_100124515
241 Ga0070664_100849397
242 Ga0070664_100970811
243 Ga0068856_100188827
244 Ga0068856_100375362
245 Ga0068861_100613821
246 Ga0070717_10272499
247 Ga0070717_10420360
248 Ga0070717_10875739
249 Ga0070717_11036887
250 Ga0070717_11091515
251 Ga0070717_11153304
252 Ga0070716_100034516
253 Ga0070712_100015890
254 Ga0070712_100549846
255 Ga0075367_10054934
256 Ga0075434_101101978
257 Ga0075434_101717678
258 Ga0075436_100004781
259 Ga0075436_100166455
260 Ga0075435_100019682
261 Ga0075435_100150967
262 Ga0099795_10037549
263 Ga0099795_10038353
264 Ga0111539_10200775
265 Ga0114129_11280899
266 Ga0105249_12417819
267 Ga0099796_10074276
268 Ga0099796_10203637
269 Ga0099796_10225953
270 Ga0105239_11787041
271 Ga0182008_10300567
272 Ga0157379_10299493
273 Ga0157379_11355339
274 Ga0213876_10046105
275 Ga0213875_10000259
276 Ga0213875_10000737
277 Ga0213875_10003971
278 Ga0213875_10224284
279 Ga0213875_10282610
280 Ga0213871_10065048
281 Ga0207673_1054893
282 Ga0207692_10054450
283 Ga0207685_10082607
284 Ga0207699_10115503
285 Ga0207699_11111241
286 Ga0207699_11125942
287 Ga0207684_10052861
288 Ga0207707_11008573
289 Ga0207693_10038468
290 Ga0207693_10224209
291 Ga0207663_10223112
292 Ga0207652_10104124
293 Ga0207652_11450647
294 Ga0207646_10007303
295 Ga0207700_10011007
296 Ga0207700_10192082
297 Ga0207664_10175992
298 Ga0207664_10187996
299 Ga0207664_10375420
300 Ga0207664_10549368
301 Ga0207664_10857392
302 Ga0207669_10865363
303 Ga0207665_10034274
304 Ga0207689_10286352
305 Ga0207651_10115180
306 Ga0207702_10830158
307 Ga0207702_11233059
308 Ga0207428_10324620
309 Ga0268266_10836245
310 Ga0265327_10000413
311 Ga0265327_10140397
312 Ga0373926_0044746
313 Ga0373934_0083340
314 Ga0373940_0049559
315 Ga0373944_0057061
316 Ga0373932_0062491
317 Ga0373941_0020340
318 Ga0373954_0082930
319 Ga0373954_0214563
320 Ga0373956_0081052
321 Ga0373946_0017248
322 Ga0373955_0055082
323 Ga0373955_0056116
324 Ga0373942_0115186
325 Ga0373924_0201331
326 Ga0373931_0695774
327 Ga0373935_0055760
328 Ga0373935_0600305
329 Ga0373927_0110014
330 Ga0373933_0001346
331 Ga0373933_0122440
332 Ga0373947_0186949
333 Ga0373947_0248051
334 Ga0373937_0005365
335 Ga0373937_0071551
336 Ga0373937_0073938
337 Ga0373937_1157643
338 Ga0373925_0436300
339 Ga0373925_0728071
340 Ga0436364_0127138
341 Ga0436364_0136075
342 Ga0436364_0290284
343 Ga0436364_0786531
344 Ga0436364_0793291
345 Ga0436364_0871988
346 Ga0436364_1373616
347 Ga0436364_1553052
348 Ga0436365_0592407
349 Ga0436365_1155698
350 Ga0436365_1164143
351 Ga0436365_1840545
352 Ga0436365_1879365
353 Ga0436360_0414229
354 Ga0436360_0886986
355 Ga0436360_1005997
356 Ga0436360_1046518
357 Ga0436361_0743500
358 Ga0436361_0855827
359 Ga0436361_0965042
360 Ga0436361_0977932
361 Ga0436361_1031678
362 Ga0436363_1048007
363 Ga0436363_1592243
364 Ga0436362_0052805
365 Ga0436362_0381493
366 Ga0436362_0525796
367 Ga0436362_0533305
368 Ga0436362_1138524
369 Ga0436362_1189589
370 Ga0466963_0663389
371 Ga0466963_0705899
372 Ga0466958_0154169
373 Ga0495592_0075708
374 Ga0495580_0414532
375 Ga0495639_0438288
376 Ga0495662_0580806
377 Ga0495584_0465031
378 Ga0495594_0270786
379 Ga0495618_0177730
380 Ga0495628_1195648
381 Ga0495586_0017143
382 Ga0495587_0770631
383 Ga0495667_0219248
384 Ga0495667_0778718
385 Ga0495635_0038535
386 Ga0495599_0398964
387 Ga0495658_0480039
388 Ga0495600_0366654
389 Ga0495600_0507460
390 Ga0495604_0167397
391 Ga0495680_0162053
392 Ga0495680_0248587
393 Ga0495602_0240930
394 Ga0496104_0122440
395 Ga0496104_1295018
396 Ga0496111_1277657
397 Ga0496112_0091015
398 Ga0496112_1161521
399 Ga0501080_0889220
400 nmdc:mga08y16_427511_c1
401 nmdc:mga08x19_11373_c1
402 nmdc:mga08x19_14_c1
403 nmdc:mga08x19_57144_c1
404 Ga0495601_0021627
405 Ga0495601_0073791
406 Ga0495595_0146506
407 Ga0495619_0017025
408 Ga0495619_0028960

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03652

RuvX

Holliday junction resolvase

37

170

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nmn-assembly1.cif.gz_A structure of yqgf from escherichia coli, a hypothetical protein 0.8486 17 151
1vhx-assembly1.cif.gz_B crystal structure of putative holliday junction resolvase 0.8467 18 151
1nmn-assembly2.cif.gz_B structure of yqgf from escherichia coli, a hypothetical protein 0.8322 17 150
1nu0-assembly2.cif.gz_B structure of the double mutant (l6m; f134m, semet form) of yqgf from escherichia coli, a hypothetical protein 0.8271 17 150
7w89-assembly1.cif.gz_A the structure of deinococcus radiodurans yqgf 0.8242 17 150
ID Description Score Start End Superfamily
af_Q2FXW1_3_142_3.30.420.140 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;YqgF/RNase H-like domain 0.9003 17 153 3.30.420.140
af_Q2FXW1_3_142_3.30.420.140 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;YqgF/RNase H-like domain 0.8762 17 153 3.30.420.140
af_Q8GYR7_22_166_3.30.420.140 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;YqgF/RNase H-like domain 0.8398 17 151 3.30.420.140
1vhxB00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;YqgF/RNase H-like domain 0.8213 18 151 3.30.420.140
1vhxB00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;YqgF/RNase H-like domain 0.7987 18 151 3.30.420.140
ID Description Score Start End GO Terms
AF-A0A523U422-F1-model_v4 Putative pre-16S rRNA nuclease (EC 3.1.-.-) 0.9798 16 151 GO:0000967
GO:0004518
GO:0005829
AF-A0A553KNP8-F1-model_v4 Putative pre-16S rRNA nuclease (EC 3.1.-.-) 0.9785 17 151 GO:0000967
GO:0004518
GO:0005829
AF-A0A7Y3RN41-F1-model_v4 Putative pre-16S rRNA nuclease (EC 3.1.-.-) 0.9763 4 152 GO:0000967
GO:0004518
GO:0005829
AF-A0A7Y8SRM8-F1-model_v4 Putative pre-16S rRNA nuclease (EC 3.1.-.-) 0.9758 1 152 GO:0000967
GO:0004518
GO:0005829
AF-A0A537QM43-F1-model_v4 Putative pre-16S rRNA nuclease (EC 3.1.-.-) 0.9744 1 153 GO:0000967
GO:0004518
GO:0005829

Map