F311809

General Info

Members Datasets Scaffolds Average Seq Length
203 163 179 488

Family's Representative Sequence

Representative Sequence 3300050494|nmdc:mga06z11_37934_c1|nmdc:mga06z11_37934_c1_642_2336
Length 564
Sequence MSAPTAVPRRAGSTRLPPSADAIVIGAGPNGLVAANLLADAGWQVLVLEAQPTPGGAVRTAELTVPGFHHDVFSAFYPFGAASPIIASLGLEDFGLTWTRAPLVLGHPTLDGPSGLLSMVHAETEASLDAFAPGDGDRWREVMSTWDRVADPLLGAMFTPFPPVRAAARLAGRLGPRGARSFVRDALLPVRRLADERFEGVGAGLVLAGLALHTDLAPEAAASGFFGWLLAGLAEQVGFPVPVGGAQRLIDALVARLEARGGEVICGARVDRILVRDGAATGVAAGGQSVLARRGVLADVGAPTLFADMVGLDLLPARVRVDLARFERGSSTVKVDWALSSPIPWRDPQLNRAGTVHLTNSMHELSEYANHLANQQLPSHPFLLIGQMTTTDPTRSPPGTETAWAYTHVPQELRVDAAGELDATWSPSSTAAFADRMEARIEAHAPGFRDRILARHVLAPPDFEHHDENLVGGEIGGGTAQLHQQLVFRPISGLARAETPIDRLYLASASAHPGGGVHGAPGSNAARAALLREGRAGPALALAKRLLRATDHPWSVGSRSARGA

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
3 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
4 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
5 2527291627 Frankia casuarinae Thr Isolate Nodule
6 2527291629 Frankia sp. BMG5.23 Isolate Nodule
7 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
8 2576861822 Frankia sp. CeD Isolate Nodule
9 2684623036 Frankia sp. CgIM4 Isolate Nodule
10 2710264753 Frankia sp. KB5 Isolate Nodule
11 2773857924 Frankia sp. CgIS1 Isolate Nodule
12 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
13 2818991437 Pedobacter terrae 518 Isolate Unclassified
14 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
15 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
16 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
17 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
18 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
19 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
20 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
21 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
22 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
23 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
24 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
25 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
28 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
29 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
31 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
32 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
33 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
34 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
35 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
38 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
39 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
40 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
73 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
74 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
75 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
76 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
78 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
79 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
101 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
102 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
103 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
104 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
107 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
108 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
122 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
157 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
158 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
161 637000116 Frankia casuarinae CcI3 Isolate Nodule
162 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
163 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.18
Metatranscriptomes 0
Isolates 11.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.9
Nodule 3.45
Rhizoplane 2.46
Rhizosphere 78.82
Stem 0
Stem Tuber 0
Unclassified 8.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000956 3300001990 Bacteria 10254
2 JGI25152J39213_1000371 3300002773 Bacteria 27576
3 JGI25150J39212_1000002 3300002774 Bacteria 537631
4 JGI25151J46595_10000003 3300003187 Bacteria 715330
5 JGI25153J46596_10000003 3300003215 Bacteria 553253
6 rootH2_10020079 3300003320 Bacteria 39210
7 rootH2_10127620 3300003320 Bacteria 5373
8 Ga0055536_1000012 3300003781 Bacteria 263217
9 Ga0065714_10002191 3300005288 Bacteria 100067
10 Ga0065714_10003195 3300005288 Bacteria 8107
11 Ga0070703_10007950 3300005406 Bacteria 2982
12 Ga0070711_100033239 3300005439 Bacteria 3434
13 Ga0070705_100038873 3300005440 Bacteria 2696
14 Ga0070700_100000126 3300005441 Bacteria 46616
15 Ga0070694_100061902 3300005444 Bacteria 2555
16 Ga0070708_100012166 3300005445 Bacteria 7015
17 Ga0070681_10016854 3300005458 Bacteria 7298
18 Ga0068867_100051175 3300005459 Bacteria 3046
19 Ga0070706_100013073 3300005467 Bacteria 7683
20 Ga0070707_100013476 3300005468 Bacteria 7648
21 Ga0070707_100253568 3300005468 Bacteria 1712
22 Ga0070699_100107474 3300005518 Bacteria 2448
23 Ga0070664_100076236 3300005564 Bacteria 2881
24 Ga0068857_100155425 3300005577 Bacteria 2074
25 Ga0068856_100002795 3300005614 Bacteria 17862
26 Ga0068856_100003435 3300005614 Bacteria 16016
27 Ga0068852_100109739 3300005616 Bacteria 2506
28 Ga0068866_10012366 3300005718 Bacteria 3718
29 Ga0068861_100016393 3300005719 Bacteria 5242
30 Ga0068858_100000091 3300005842 Bacteria 93802
31 Ga0068858_100040765 3300005842 Bacteria 4307
32 Ga0070712_100083753 3300006175 Bacteria 2317
33 Ga0075428_100017765 3300006844 Bacteria 7859
34 Ga0075430_100172709 3300006846 Bacteria 1798
35 Ga0075431_100005120 3300006847 Bacteria 12897
36 Ga0075431_100014991 3300006847 Bacteria 7846
37 Ga0075431_100021951 3300006847 Bacteria 6527
38 Ga0075431_100077882 3300006847 Bacteria 3421
39 Ga0075433_10091023 3300006852 Bacteria 2696
40 Ga0075434_100003598 3300006871 Bacteria 13840
41 Ga0075434_100025800 3300006871 Bacteria 5753
42 Ga0075434_100042942 3300006871 Unclassified 4483
43 Ga0075429_100002489 3300006880 Bacteria 15485
44 Ga0075429_100019312 3300006880 Bacteria 5902
45 Ga0068865_100047439 3300006881 Bacteria 2952
46 Ga0075436_100011880 3300006914 Bacteria 5975
47 Ga0075436_100017143 3300006914 Bacteria 4957
48 Ga0075435_100011390 3300007076 Bacteria 6538
49 Ga0075435_100026491 3300007076 Bacteria 4525
50 Ga0075435_100034702 3300007076 Bacteria 3999
51 Ga0075435_100102022 3300007076 Bacteria 2378
52 Ga0105240_10005505 3300009093 Bacteria 18869
53 Ga0111539_10115576 3300009094 Bacteria 3146
54 Ga0111539_10128546 3300009094 Bacteria 2968
55 Ga0105245_10071103 3300009098 Bacteria 3159
56 Ga0114129_10015659 3300009147 Bacteria 10782
57 Ga0114129_10025045 3300009147 Bacteria 8458
58 Ga0114129_10082433 3300009147 Bacteria 4469
59 Ga0114129_10143207 3300009147 Bacteria 3275
60 Ga0105243_10068547 3300009148 Bacteria 2859
61 Ga0105239_10000001 3300010375 Bacteria 617353
62 Ga0157370_10055642 3300013104 Bacteria 3768
63 Ga0157370_10059006 3300013104 Bacteria 3647
64 Ga0157374_10000004 3300013296 Bacteria 759774
65 Ga0157378_10003972 3300013297 Bacteria 13068
66 Ga0182008_10000135 3300014497 Bacteria 55864
67 Ga0157377_10070054 3300014745 Bacteria 2025
68 Ga0157376_10093606 3300014969 Unclassified 2609
69 Ga0183373_1007 3300015682 Bacteria 282776
70 Ga0163161_10000348 3300017792 Bacteria 39127
71 Ga0163161_10000962 3300017792 Bacteria 22076
72 Ga0213876_10000024 3300021384 Bacteria 237488
73 Ga0213876_10000319 3300021384 Bacteria 42221
74 Ga0207425_1000004 3300025245 Bacteria 1092421
75 Ga0209026_1000357 3300025250 Bacteria 43020
76 Ga0209026_1001753 3300025250 Bacteria 8991
77 Ga0209129_1000005 3300025258 Bacteria 777812
78 Ga0209676_1000001 3300025292 Bacteria 1852142
79 Ga0209025_1000009 3300025294 Bacteria 1092561
80 Ga0209758_1000010 3300025297 Bacteria 1092782
81 Ga0209050_1000018 3300025298 Bacteria 723263
82 Ga0207653_10005502 3300025885 Bacteria 3956
83 Ga0207642_10033092 3300025899 Bacteria 2184
84 Ga0207684_10020134 3300025910 Bacteria 5700
85 Ga0207707_10067328 3300025912 Bacteria 3119
86 Ga0207695_10025103 3300025913 Bacteria 6684
87 Ga0207671_10001753 3300025914 Bacteria 24394
88 Ga0207662_10032524 3300025918 Bacteria 3037
89 Ga0207657_10030386 3300025919 Bacteria 4904
90 Ga0207646_10017388 3300025922 Bacteria 6731
91 Ga0207700_10025583 3300025928 Bacteria 4101
92 Ga0207640_10047351 3300025981 Bacteria 2773
93 Ga0207677_10099742 3300026023 Bacteria 2133
94 Ga0207703_10000152 3300026035 Bacteria 79658
95 Ga0207703_10062350 3300026035 Bacteria 3054
96 Ga0207708_10000059 3300026075 Bacteria 94590
97 Ga0207702_10003033 3300026078 Bacteria 15601
98 Ga0207702_10010654 3300026078 Bacteria 7681
99 Ga0207698_10088812 3300026142 Bacteria 2522
100 Ga0307511_10003234 3300030521 Bacteria 16764
101 Ga0265320_10000216 3300031240 Bacteria 46656
102 Ga0265320_10008944 3300031240 Bacteria 6084
103 Ga0307408_100132182 3300031548 Bacteria 1948
104 Ga0265314_10009914 3300031711 Bacteria 7989
105 Ga0316576_10090721 3300031727 Bacteria 2276
106 Ga0316578_10082036 3300031728 Bacteria 1919
107 Ga0307405_10000043 3300031731 Bacteria 78391
108 Ga0307407_10000080 3300031903 Bacteria 34463
109 Ga0307407_10075081 3300031903 Bacteria 2025
110 Ga0307412_10153385 3300031911 Bacteria 1703
111 Ga0307416_100000007 3300032002 Bacteria 433284
112 Ga0307510_10052358 3300033180 Bacteria 4305
113 Ga0316582_0045743 3300036647 Bacteria 2757
114 Ga0316584_0019450 3300036712 Bacteria 4910
115 Ga0316584_0089884 3300036712 Bacteria 2299
116 Ga0373925_0020684 3300037068 Bacteria 4794
117 Ga0395899_0036003 3300037312 Bacteria 3714
118 Ga0395899_0043875 3300037312 Bacteria 3333
119 Ga0395900_0040341 3300037418 Bacteria 4811
120 Ga0395905_0000380 3300037471 Bacteria 63103
121 Ga0395905_0031124 3300037471 Bacteria 5025
122 Ga0395901_0002155 3300038443 Bacteria 20107
123 Ga0395901_0180163 3300038443 Bacteria 2216
124 Ga0436365_0289912 3300039437 Bacteria 336570
125 Ga0436365_1744743 3300039437 Bacteria 193023
126 Ga0466959_0082299 3300045049 Bacteria 2319
127 Ga0495603_0092401 3300046455 Bacteria 1768
128 Ga0495585_0002063 3300046492 Bacteria 14780
129 Ga0495594_0029455 3300046499 Bacteria 2967
130 Ga0495606_0001840 3300046507 Bacteria 26766
131 Ga0495610_0000039 3300046512 Bacteria 166799
132 Ga0495610_0000148 3300046512 Bacteria 77303
133 Ga0495620_0000041 3300046515 Bacteria 112605
134 Ga0495588_0021011 3300046674 Bacteria 3213
135 Ga0495613_0054525 3300046689 Bacteria 2939
136 Ga0495686_0001134 3300047472 Bacteria 31471
137 Ga0495602_0044859 3300048088 Bacteria 4006
138 Ga0496108_0011993 3300048911 Bacteria 7052
139 Ga0496108_0017888 3300048911 Bacteria 5799
140 Ga0496109_0197103 3300048912 Bacteria 1893
141 Ga0496110_0176122 3300048913 Bacteria 1941
142 Ga0496121_0000008 3300048924 Bacteria 843593
143 Ga0501032_0019653 3300049569 Bacteria 4721
144 Ga0501034_0056068 3300049571 Bacteria 3966
145 Ga0501037_0011926 3300049573 Bacteria 6403
146 Ga0501038_0029404 3300049574 Bacteria 4870
147 Ga0501039_0007413 3300049575 Bacteria 8367
148 Ga0501042_0029169 3300049578 Bacteria 3890
149 Ga0501070_0038287 3300049586 Bacteria 4001
150 Ga0501071_0024848 3300049587 Bacteria 4191
151 Ga0501072_0017514 3300049588 Bacteria 5506
152 Ga0501074_0065481 3300049590 Bacteria 2615
153 Ga0501075_0040765 3300049591 Bacteria 3478
154 Ga0501076_0020287 3300049592 Bacteria 5086
155 Ga0501079_0003930 3300049741 Bacteria 10977
156 Ga0501080_0016663 3300049742 Bacteria 6785
157 Ga0501083_0038712 3300049744 Bacteria 3241
158 Ga0501045_0024332 3300049824 Bacteria 4347
159 nmdc:mga06z11_37934_c1 3300050494 Bacteria 2389
160 nmdc:mga05p37_16234_c1 3300050507 Bacteria 8965
161 nmdc:mga05p37_188152_c1 3300050507 Bacteria 2508
162 nmdc:mga05p37_51614_c1 3300050507 Bacteria 5057
163 nmdc:mga09592_14330_c1 3300050508 Bacteria 6473
164 nmdc:mga0qj67_42793_c1 3300050509 Bacteria 3566
165 nmdc:mga06r32_35012_c1 3300050510 Unclassified 4738
166 nmdc:mga06r32_35172_c1 3300050510 Bacteria 4727
167 nmdc:mga06r32_43853_c1 3300050510 Bacteria 4257
168 nmdc:mga06r32_8453_c1 3300050510 Bacteria 9276
169 nmdc:mga08y16_394695_c1 3300050511 Unclassified 1417
170 nmdc:mga0n895_40558_c1 3300050512 Bacteria 4522
171 nmdc:mga0rr50_50760_c1 3300050513 Bacteria 3075
172 nmdc:mga08x19_19960_c1 3300050514 Unclassified 4121
173 nmdc:mga0a205_21609_c1 3300050515 Bacteria 6085
174 nmdc:mga0a205_35128_c1 3300050515 Bacteria 4813
175 Ga0500635_0000404 3300053080 Bacteria 13053
176 Ga0500622_0001745 3300053156 Bacteria 16761
177 Ga0501084_0017915 3300054114 Bacteria 5896
178 Ga0501082_0028440 3300060353 Bacteria 4815
179 Ga0530510_0003611 3300061734 Bacteria 10649

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_394695_c1 nmdc:mga08y16_394695_c1_14_1237 366
2 3300048911 Ga0496108_0011993 Ga0496108_0011993_1455_2618 383
3 3300038443 Ga0395901_0180163 Ga0395901_0180163_307_1671 437
4 3300037418 Ga0395900_0040341 Ga0395900_0040341_1446_2822 440
5 3300037471 Ga0395905_0031124 Ga0395905_0031124_2252_3628 440
6 3300037312 Ga0395899_0043875 Ga0395899_0043875_1115_2497 442
7 3300050514 nmdc:mga08x19_19960_c1 nmdc:mga08x19_19960_c1_2749_4083 442
8 3300006846 Ga0075430_100172709 Ga0075430_1001727091 445
9 3300006847 Ga0075431_100014991 Ga0075431_1000149918 445
10 3300006880 Ga0075429_100002489 Ga0075429_10000248911 445
11 3300009147 Ga0114129_10025045 Ga0114129_100250457 445
12 3300050507 nmdc:mga05p37_16234_c1 nmdc:mga05p37_16234_c1_520_2112 445
13 3300050508 nmdc:mga09592_14330_c1 nmdc:mga09592_14330_c1_1404_2996 445
14 3300050509 nmdc:mga0qj67_42793_c1 nmdc:mga0qj67_42793_c1_1212_2804 445
15 3300050510 nmdc:mga06r32_8453_c1 nmdc:mga06r32_8453_c1_6182_7774 445
16 3300009093 Ga0105240_10005505 Ga0105240_1000550516 454
17 3300025913 Ga0207695_10025103 Ga0207695_100251033 454
18 3300036712 Ga0316584_0089884 Ga0316584_0089884_224_1837 455
19 3300006914 Ga0075436_100017143 Ga0075436_1000171432 456
20 3300007076 Ga0075435_100011390 Ga0075435_1000113906 456
21 3300031728 Ga0316578_10082036 Ga0316578_100820362 456
22 3300050513 nmdc:mga0rr50_50760_c1 nmdc:mga0rr50_50760_c1_1012_2433 456
23 3300036712 Ga0316584_0019450 Ga0316584_0019450_1395_2813 459
24 iso_pu_bacteria 2912757875 2912763887 460
25 3300026035 Ga0207703_10062350 Ga0207703_100623502 461
26 3300036647 Ga0316582_0045743 Ga0316582_0045743_861_2348 463
27 3300048911 Ga0496108_0017888 Ga0496108_0017888_3930_5483 463
28 3300048912 Ga0496109_0197103 Ga0496109_0197103_269_1822 463
29 3300048913 Ga0496110_0176122 Ga0496110_0176122_170_1723 463
30 iso_pu_bacteria 2527291627 2528205636 463
31 iso_pu_bacteria 2802429296 2804848882 463
32 iso_pu_bacteria 8025413630 8025417497 463
33 iso_pu_bacteria 8025530807 8025533038 463
34 3300005564 Ga0070664_100076236 Ga0070664_1000762362 464
35 iso_pu_bacteria 2935390628 2935395369 464
36 3300006847 Ga0075431_100077882 Ga0075431_1000778822 465
37 3300006852 Ga0075433_10091023 Ga0075433_100910232 465
38 3300009094 Ga0111539_10115576 Ga0111539_101155762 465
39 3300009147 Ga0114129_10143207 Ga0114129_101432071 465
40 3300050510 nmdc:mga06r32_43853_c1 nmdc:mga06r32_43853_c1_2673_4193 465
41 3300050515 nmdc:mga0a205_21609_c1 nmdc:mga0a205_21609_c1_362_1882 465
42 3300005439 Ga0070711_100033239 Ga0070711_1000332392 466
43 3300005459 Ga0068867_100051175 Ga0068867_1000511752 466
44 3300005718 Ga0068866_10012366 Ga0068866_100123662 466
45 3300005719 Ga0068861_100016393 Ga0068861_1000163935 466
46 3300005842 Ga0068858_100040765 Ga0068858_1000407652 466
47 3300006881 Ga0068865_100047439 Ga0068865_1000474392 466
48 3300009098 Ga0105245_10071103 Ga0105245_100711032 466
49 3300014745 Ga0157377_10070054 Ga0157377_100700542 466
50 3300025899 Ga0207642_10033092 Ga0207642_100330921 466
51 3300025918 Ga0207662_10032524 Ga0207662_100325242 466
52 3300025928 Ga0207700_10025583 Ga0207700_100255833 466
53 3300025981 Ga0207640_10047351 Ga0207640_100473512 466
54 3300026023 Ga0207677_10099742 Ga0207677_100997421 466
55 iso_pu_bacteria 2515154129 2515718777 466
56 iso_pu_bacteria 2515154202 2516082984 466
57 3300037068 Ga0373925_0020684 Ga0373925_0020684_1182_2588 467
58 3300046689 Ga0495613_0054525 Ga0495613_0054525_52_1620 467
59 3300005616 Ga0068852_100109739 Ga0068852_1001097393 468
60 3300006175 Ga0070712_100083753 Ga0070712_1000837532 468
61 3300026142 Ga0207698_10088812 Ga0207698_100888123 468
62 3300031240 Ga0265320_10000216 Ga0265320_1000021612 468
63 3300031711 Ga0265314_10009914 Ga0265314_100099146 468
64 3300031727 Ga0316576_10090721 Ga0316576_100907212 468
65 3300005468 Ga0070707_100013476 Ga0070707_1000134763 469
66 3300005577 Ga0068857_100155425 Ga0068857_1001554251 469
67 3300005842 Ga0068858_100000091 Ga0068858_10000009148 469
68 3300006871 Ga0075434_100003598 Ga0075434_1000035987 469
69 3300006871 Ga0075434_100025800 Ga0075434_1000258002 469
70 3300007076 Ga0075435_100026491 Ga0075435_1000264913 469
71 3300007076 Ga0075435_100102022 Ga0075435_1001020222 469
72 3300026035 Ga0207703_10000152 Ga0207703_1000015249 469
73 3300031548 Ga0307408_100132182 Ga0307408_1001321821 469
74 3300031911 Ga0307412_10153385 Ga0307412_101533851 469
75 3300046455 Ga0495603_0092401 Ga0495603_0092401_261_1679 469
76 3300046499 Ga0495594_0029455 Ga0495594_0029455_1339_2757 469
77 3300046674 Ga0495588_0021011 Ga0495588_0021011_879_2297 469
78 3300050512 nmdc:mga0n895_40558_c1 nmdc:mga0n895_40558_c1_712_2133 469
79 3300050515 nmdc:mga0a205_35128_c1 nmdc:mga0a205_35128_c1_1810_3231 469
80 iso_pu_bacteria 2515154088 2515494771 469
81 iso_pu_bacteria 2928142448 2928146534 469
82 3300005441 Ga0070700_100000126 Ga0070700_10000012631 470
83 3300005444 Ga0070694_100061902 Ga0070694_1000619022 470
84 3300009094 Ga0111539_10128546 Ga0111539_101285462 470
85 3300026075 Ga0207708_10000059 Ga0207708_1000005972 470
86 3300048088 Ga0495602_0044859 Ga0495602_0044859_574_1995 470
87 3300009147 Ga0114129_10082433 Ga0114129_100824332 471
88 3300031903 Ga0307407_10075081 Ga0307407_100750812 471
89 3300046515 Ga0495620_0000041 Ga0495620_0000041_98429_99976 471
90 3300049569 Ga0501032_0019653 Ga0501032_0019653_961_2394 471
91 3300049573 Ga0501037_0011926 Ga0501037_0011926_1350_2783 471
92 3300049574 Ga0501038_0029404 Ga0501038_0029404_1959_3392 471
93 3300049575 Ga0501039_0007413 Ga0501039_0007413_4485_5918 471
94 3300049578 Ga0501042_0029169 Ga0501042_0029169_1308_2741 471
95 3300049586 Ga0501070_0038287 Ga0501070_0038287_1450_2883 471
96 3300049587 Ga0501071_0024848 Ga0501071_0024848_1451_2884 471
97 3300049588 Ga0501072_0017514 Ga0501072_0017514_3082_4515 471
98 3300049590 Ga0501074_0065481 Ga0501074_0065481_448_1881 471
99 3300049591 Ga0501075_0040765 Ga0501075_0040765_926_2359 471
100 3300049592 Ga0501076_0020287 Ga0501076_0020287_1380_2813 471
101 3300049741 Ga0501079_0003930 Ga0501079_0003930_988_2421 471
102 3300049742 Ga0501080_0016663 Ga0501080_0016663_503_1936 471
103 3300049744 Ga0501083_0038712 Ga0501083_0038712_1551_2984 471
104 3300049824 Ga0501045_0024332 Ga0501045_0024332_1120_2553 471
105 3300050507 nmdc:mga05p37_188152_c1 nmdc:mga05p37_188152_c1_52_1485 471
106 3300054114 Ga0501084_0017915 Ga0501084_0017915_3618_5051 471
107 3300060353 Ga0501082_0028440 Ga0501082_0028440_1451_2884 471
108 3300061734 Ga0530510_0003611 Ga0530510_0003611_2712_4145 471
109 iso_pu_bacteria 2576861822 2579750363 471
110 3300009148 Ga0105243_10068547 Ga0105243_100685472 472
111 3300003320 rootH2_10020079 rootH2_1002007919 473
112 3300005406 Ga0070703_10007950 Ga0070703_100079503 473
113 3300005440 Ga0070705_100038873 Ga0070705_1000388733 473
114 3300005445 Ga0070708_100012166 Ga0070708_1000121666 473
115 3300005458 Ga0070681_10016854 Ga0070681_100168546 473
116 3300005467 Ga0070706_100013073 Ga0070706_1000130733 473
117 3300005468 Ga0070707_100253568 Ga0070707_1002535681 473
118 3300005518 Ga0070699_100107474 Ga0070699_1001074742 473
119 3300006847 Ga0075431_100021951 Ga0075431_10002195110 473
120 3300006914 Ga0075436_100011880 Ga0075436_1000118803 473
121 3300025885 Ga0207653_10005502 Ga0207653_100055021 473
122 3300025910 Ga0207684_10020134 Ga0207684_100201345 473
123 3300025912 Ga0207707_10067328 Ga0207707_100673282 473
124 3300025922 Ga0207646_10017388 Ga0207646_100173885 473
125 3300050510 nmdc:mga06r32_35012_c1 nmdc:mga06r32_35012_c1_846_2291 473
126 3300006871 Ga0075434_100042942 Ga0075434_1000429425 474
127 3300007076 Ga0075435_100034702 Ga0075435_1000347022 474
128 3300021384 Ga0213876_10000024 Ga0213876_1000002459 474
129 3300021384 Ga0213876_10000319 Ga0213876_1000031935 474
130 3300039437 Ga0436365_0289912 Ga0436365_0289912_103106_104542 474
131 3300039437 Ga0436365_1744743 Ga0436365_1744743_44991_46427 474
132 3300045049 Ga0466959_0082299 Ga0466959_0082299_449_2056 474
133 3300046507 Ga0495606_0001840 Ga0495606_0001840_16170_17594 474
134 3300047472 Ga0495686_0001134 Ga0495686_0001134_27101_28540 474
135 3300005614 Ga0068856_100002795 Ga0068856_1000027957 475
136 3300026078 Ga0207702_10003033 Ga0207702_100030338 475
137 3300050494 nmdc:mga06z11_37934_c1 nmdc:mga06z11_37934_c1_642_2336 475
138 iso_pu_bacteria 2527291629 2528215278 475
139 iso_pu_bacteria 2546825537 2546951376 475
140 iso_pu_bacteria 2684623036 2686544095 475
141 iso_pu_bacteria 2710264753 2710605977 475
142 iso_pu_bacteria 2773857924 2774866228 475
143 iso_pu_bacteria 637000116 637880571 475
144 3300031240 Ga0265320_10008944 Ga0265320_100089442 476
145 iso_pu_bacteria 2818991437 2819547716 476
146 iso_pu_bacteria 2857627736 2857632336 476
147 iso_pu_bacteria 2904445276 2904449490 476
148 iso_pu_bacteria 2977232053 2977236687 476
149 3300003320 rootH2_10127620 rootH2_101276203 477
150 3300025919 Ga0207657_10030386 Ga0207657_100303861 477
151 iso_pu_bacteria 2522125168 2522547733 477
152 iso_pu_bacteria 2842722452 2842722546 477
153 iso_pu_bacteria 2945997725 2945999779 477
154 3300025250 Ga0209026_1000357 Ga0209026_100035714 478
155 3300030521 Ga0307511_10003234 Ga0307511_100032348 478
156 3300048924 Ga0496121_0000008 Ga0496121_0000008_70593_72092 478
157 3300006844 Ga0075428_100017765 Ga0075428_1000177658 479
158 3300006847 Ga0075431_100005120 Ga0075431_1000051204 479
159 3300006880 Ga0075429_100019312 Ga0075429_1000193124 479
160 3300009147 Ga0114129_10015659 Ga0114129_100156599 479
161 3300013296 Ga0157374_10000004 Ga0157374_10000004381 479
162 3300014969 Ga0157376_10093606 Ga0157376_100936063 479
163 3300033180 Ga0307510_10052358 Ga0307510_100523584 479
164 3300049571 Ga0501034_0056068 Ga0501034_0056068_1555_3012 479
165 3300050507 nmdc:mga05p37_51614_c1 nmdc:mga05p37_51614_c1_2379_3860 479
166 3300050510 nmdc:mga06r32_35172_c1 nmdc:mga06r32_35172_c1_2179_3660 479
167 3300053080 Ga0500635_0000404 Ga0500635_0000404_5493_6932 479
168 3300053156 Ga0500622_0001745 Ga0500622_0001745_1254_2693 479
169 3300002773 JGI25152J39213_1000371 JGI25152J39213_10003714 480
170 3300002774 JGI25150J39212_1000002 JGI25150J39212_1000002316 480
171 3300003187 JGI25151J46595_10000003 JGI25151J46595_10000003341 480
172 3300003215 JGI25153J46596_10000003 JGI25153J46596_10000003173 480
173 3300003781 Ga0055536_1000012 Ga0055536_1000012197 480
174 3300005288 Ga0065714_10002191 Ga0065714_1000219137 480
175 3300010375 Ga0105239_10000001 Ga0105239_1000000169 480
176 3300013104 Ga0157370_10055642 Ga0157370_100556421 480
177 3300013104 Ga0157370_10059006 Ga0157370_100590061 480
178 3300014497 Ga0182008_10000135 Ga0182008_100001353 480
179 3300015682 Ga0183373_1007 Ga0183373_100717 480
180 3300017792 Ga0163161_10000348 Ga0163161_1000034841 480
181 3300025245 Ga0207425_1000004 Ga0207425_1000004630 480
182 3300025258 Ga0209129_1000005 Ga0209129_1000005312 480
183 3300025292 Ga0209676_1000001 Ga0209676_10000011388 480
184 3300025294 Ga0209025_1000009 Ga0209025_1000009630 480
185 3300025297 Ga0209758_1000010 Ga0209758_1000010631 480
186 3300025298 Ga0209050_1000018 Ga0209050_1000018195 480
187 3300046512 Ga0495610_0000039 Ga0495610_0000039_65888_67330 480
188 3300046512 Ga0495610_0000148 Ga0495610_0000148_71346_72788 480
189 3300001990 JGI24737J22298_10000956 JGI24737J22298_100009563 481
190 3300005288 Ga0065714_10003195 Ga0065714_100031958 481
191 3300005614 Ga0068856_100003435 Ga0068856_10000343512 481
192 3300013297 Ga0157378_10003972 Ga0157378_100039728 481
193 3300017792 Ga0163161_10000962 Ga0163161_100009627 481
194 3300025250 Ga0209026_1001753 Ga0209026_10017531 481
195 3300025914 Ga0207671_10001753 Ga0207671_1000175313 481
196 3300026078 Ga0207702_10010654 Ga0207702_100106544 481
197 3300031731 Ga0307405_10000043 Ga0307405_1000004312 481
198 3300031903 Ga0307407_10000080 Ga0307407_1000008017 481
199 3300032002 Ga0307416_100000007 Ga0307416_100000007233 481
200 3300037312 Ga0395899_0036003 Ga0395899_0036003_1362_2810 481
201 3300037471 Ga0395905_0000380 Ga0395905_0000380_49352_50800 481
202 3300038443 Ga0395901_0002155 Ga0395901_0002155_18472_19920 481
203 3300046492 Ga0495585_0002063 Ga0495585_0002063_11405_12886 481

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

24

85

0.93

PF01494

FAD_binding_3

FAD binding domain

19

65

0.87

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

30

299

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ntd-assembly1.cif.gz_A-2 crystal structure of hlmi 0.9679 9 38
7osn-assembly3.cif.gz_F ired361 from micromonospora sp. in complex with nadp+ 0.9661 9 36
6z5f-assembly1.cif.gz_AAA crystal structure of rat peroxisomal multifunctional enzyme type-1 (rpmfe1) complexed with 3-ketodecanoyl-coa and oxidised nicotinamide adenine dinucleotide 0.9625 9 40
7o4t-assembly1.cif.gz_A structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme with coenzyme a bound at the hydratase, thiolase active sites and possible additional binding site (coa(ech/had)) 0.9621 9 39
5a9s-assembly1.cif.gz_B nadph complex of imine reductase from amycolatopsis orientalis 0.9612 9 36
ID Description Score Start End Superfamily
af_O06826_122_473_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9849 129 472 3.50.50.60
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9826 10 46 3.50.50.60
3lxdA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9793 9 42 3.50.50.60
4i58A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9769 7 43 3.50.50.60
3e1tA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9743 8 39 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A258KDQ9-F1-model_v4 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 0.9962 26 425 GO:0016491
AF-A0A177QAP5-F1-model_v4 FAD-dependent oxidoreductase 0.9943 8 474
AF-A0A522SWC4-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9938 223 481
AF-A0A4Q3SPV8-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9935 160 477
AF-A0A534PDH8-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9925 7 474

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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