F311507

General Info

Members Datasets Scaffolds Average Seq Length
203 161 168 413

Family's Representative Sequence

Representative Sequence 3300041413|Ga0439465_0004054|Ga0439465_0004054_524_1897
Length 457
Sequence MDCKFYFSSGNSTVRQTGHSTQTGRRNDVLIGAVADDITGATDLCLMLSREGMKTLQVIGVPEEGADFGDADAVVVALKSRTIPAEEAVRASRAAAGKLLAAGAEQLLFKYCSTFDSTDDGNIGPVADALQDLTGGELTIACPSFPAAGRTVYKGHLFVGDRLLSESSLKDHPLTPMHDPDLVRVLQRQTRRPVGLIDWPVIARGEDAIRAAFAQQQAAGKRILVVDTLSDADLRAIGAACDGMKLVTGGSGIAMGLPENFRKRKKLPVRKAMTRMVAPAGRRVVLAGSCSLATRVQIEVARNDAAALLRLDISAVADGSQSAAEIADWVVSQDKDRLPLVYSSASPQELQSIQAAMGRHESGALVEQTLAEVAERLKQKGFTRFLIAGGETSGAVINALGVKTLSIGPEIDPGVPWTRSLSGPDIVLALKSGNFGAPDFFLKAWAQLETEGSDARD

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
3 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
4 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
5 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
6 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
7 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
8 2738541293 Rhizobium sp. GV031 Isolate Unclassified
9 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
10 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
11 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
12 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
13 2847670302 Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 Isolate Nodule
14 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
15 2867369537 Streptomyces sp. Z26 Isolate Unclassified
16 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
17 2878035449 Mesorhizobium sp. M3A.F.Ca.ET.201.01.1.1 Isolate Nodule
18 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
19 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
20 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
21 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
22 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
23 2906354277 Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 Isolate Nodule
24 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
25 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
26 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
27 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
28 2938014810 Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 Isolate Nodule
29 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
30 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
31 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
32 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
33 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
34 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
35 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
36 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
37 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
38 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
39 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
40 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
41 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
42 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
43 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
44 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
45 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
46 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
66 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
68 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
89 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
90 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
91 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
95 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
100 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
105 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
106 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
112 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
158 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
159 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
160 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
161 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.76
Metatranscriptomes 0
Isolates 17.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.87
Nodule 8.87
Rhizoplane 1.48
Rhizosphere 69.46
Stem 0
Stem Tuber 0
Unclassified 11.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24749J21850_1000008 3300002076 Bacteria 45410
2 JGI25152J39213_1000009 3300002773 Bacteria 138285
3 JGI25152J39213_1011958 3300002773 Bacteria 1891
4 JGI25150J39212_1000016 3300002774 Bacteria 153945
5 JGI25151J46595_10000073 3300003187 Bacteria 136684
6 JGI25153J46596_10003494 3300003215 Bacteria 8776
7 Ga0055529_1003759 3300003763 Bacteria 2442
8 Ga0065165_1008347 3300005262 Bacteria 4867
9 Ga0070658_10015487 3300005327 Bacteria 6100
10 Ga0070670_100222925 3300005331 Bacteria 1641
11 Ga0070660_100020139 3300005339 Bacteria 4899
12 Ga0070661_100052331 3300005344 Bacteria 2989
13 Ga0070669_100159666 3300005353 Bacteria 1751
14 Ga0070667_100000851 3300005367 Bacteria 28385
15 Ga0070667_100146187 3300005367 Bacteria 2073
16 Ga0070713_100019898 3300005436 Bacteria 5138
17 Ga0070679_100087936 3300005530 Bacteria 3095
18 Ga0070679_100099261 3300005530 Bacteria 2899
19 Ga0070665_100186229 3300005548 Bacteria 2077
20 Ga0070665_100238726 3300005548 Bacteria 1818
21 Ga0068855_100057902 3300005563 Bacteria 4541
22 Ga0068852_100033315 3300005616 Bacteria 4276
23 Ga0068859_100005767 3300005617 Bacteria 12590
24 Ga0068861_100000333 3300005719 Bacteria 26666
25 Ga0075428_100155864 3300006844 Bacteria 2481
26 Ga0075428_100167099 3300006844 Bacteria 2386
27 Ga0075428_100280341 3300006844 Bacteria 1793
28 Ga0075430_100020902 3300006846 Bacteria 5564
29 Ga0075431_100164306 3300006847 Bacteria 2282
30 Ga0075429_100017354 3300006880 Bacteria 6223
31 Ga0097620_100005767 3300006931 Bacteria 12590
32 Ga0105240_10249215 3300009093 Bacteria 2055
33 Ga0111539_10013763 3300009094 Bacteria 10105
34 Ga0111539_10013797 3300009094 Bacteria 10097
35 Ga0111539_10445347 3300009094 Bacteria 1508
36 Ga0114129_10586419 3300009147 Bacteria 1446
37 Ga0105248_10000157 3300009177 Bacteria 79064
38 Ga0157370_10306367 3300013104 Bacteria 1466
39 Ga0157369_10001813 3300013105 Bacteria 25856
40 Ga0157372_10007776 3300013307 Bacteria 11386
41 Ga0213876_10021253 3300021384 Bacteria 3433
42 Ga0207425_1000054 3300025245 Bacteria 153997
43 Ga0209148_1002599 3300025254 Bacteria 5922
44 Ga0209129_1000016 3300025258 Bacteria 485491
45 Ga0209129_1000108 3300025258 Bacteria 153997
46 Ga0209455_1002594 3300025272 Bacteria 6874
47 Ga0209675_1009279 3300025291 Bacteria 3491
48 Ga0209676_1011884 3300025292 Bacteria 3469
49 Ga0209025_1000126 3300025294 Bacteria 200866
50 Ga0209025_1000189 3300025294 Bacteria 153997
51 Ga0209758_1000162 3300025297 Bacteria 153997
52 Ga0209051_1006374 3300025303 Bacteria 6670
53 Ga0207705_10035206 3300025909 Bacteria 3582
54 Ga0207657_10004938 3300025919 Bacteria 14027
55 Ga0207646_10005672 3300025922 Bacteria 13089
56 Ga0207681_10120418 3300025923 Bacteria 1924
57 Ga0207650_10177579 3300025925 Bacteria 1696
58 Ga0207711_10004750 3300025941 Bacteria 11535
59 Ga0207661_10174970 3300025944 Bacteria 1871
60 Ga0207667_10070530 3300025949 Bacteria 3636
61 Ga0207658_10005952 3300025986 Bacteria 8329
62 Ga0207658_10087759 3300025986 Bacteria 2403
63 Ga0207703_10208165 3300026035 Bacteria 1742
64 Ga0207675_100001097 3300026118 Bacteria 26813
65 Ga0207698_10062933 3300026142 Bacteria 2901
66 Ga0207428_10013054 3300027907 Bacteria 7275
67 Ga0268266_10037298 3300028379 Bacteria 4142
68 Ga0268266_10253570 3300028379 Bacteria 1628
69 Ga0265325_10004296 3300031241 Bacteria 9033
70 Ga0265340_10016567 3300031247 Bacteria 3816
71 Ga0265339_10006903 3300031249 Bacteria 7397
72 Ga0265316_10089859 3300031344 Bacteria 2343
73 Ga0265313_10000181 3300031595 Bacteria 67263
74 Ga0265342_10005915 3300031712 Bacteria 9216
75 Ga0316578_10045340 3300031728 Bacteria 2559
76 Ga0316577_10000250 3300031733 Bacteria 18925
77 Ga0307406_10027838 3300031901 Bacteria 3410
78 Ga0307409_100020215 3300031995 Bacteria 4533
79 Ga0307416_100145646 3300032002 Bacteria 2162
80 Ga0316582_0045202 3300036647 Bacteria 2772
81 Ga0316584_0002048 3300036712 Bacteria 12618
82 Ga0395900_0052817 3300037418 Bacteria 4183
83 Ga0395900_0258534 3300037418 Bacteria 1740
84 Ga0395905_0016532 3300037471 Bacteria 7014
85 Ga0395905_0017781 3300037471 Bacteria 6752
86 Ga0395905_0070866 3300037471 Bacteria 3267
87 Ga0395905_0125737 3300037471 Bacteria 2411
88 Ga0395901_0002399 3300038443 Bacteria 19045
89 Ga0439465_0004054 3300041413 Bacteria 4775
90 Ga0439459_0008352 3300042438 Bacteria 1768
91 Ga0466960_0018941 3300044901 Bacteria 3024
92 Ga0451576_0000147 3300045051 Bacteria 179223
93 Ga0466967_0068405 3300045976 Bacteria 3171
94 Ga0495585_0023964 3300046492 Bacteria 3501
95 Ga0496111_0010697 3300048914 Bacteria 6172
96 Ga0496111_0040895 3300048914 Bacteria 3326
97 Ga0496116_0031982 3300048919 Bacteria 3756
98 Ga0496117_0003421 3300048920 Bacteria 18459
99 Ga0496118_0052435 3300048921 Bacteria 3111
100 Ga0496120_0029617 3300048923 Bacteria 3341
101 Ga0496121_0026271 3300048924 Bacteria 5492
102 Ga0496122_0001238 3300048925 Bacteria 43129
103 Ga0496123_0001005 3300048926 Bacteria 43141
104 Ga0496124_0000790 3300048927 Bacteria 51766
105 Ga0496125_0000765 3300048928 Bacteria 52600
106 Ga0496125_0000955 3300048928 Bacteria 45466
107 Ga0496125_0035505 3300048928 Bacteria 4371
108 Ga0496125_0148600 3300048928 Bacteria 1615
109 Ga0496126_0000626 3300048929 Bacteria 66242
110 Ga0496126_0074444 3300048929 Bacteria 3016
111 Ga0501031_0011345 3300049568 Bacteria 5804
112 Ga0501032_0001879 3300049569 Bacteria 16587
113 Ga0501032_0011562 3300049569 Bacteria 6334
114 Ga0501032_0035814 3300049569 Bacteria 3391
115 Ga0501033_0023465 3300049570 Bacteria 4652
116 Ga0501034_0056105 3300049571 Bacteria 3965
117 Ga0501034_0141485 3300049571 Bacteria 2385
118 Ga0501036_0013235 3300049572 Bacteria 6849
119 Ga0501036_0108654 3300049572 Bacteria 2345
120 Ga0501036_0122957 3300049572 Bacteria 2192
121 Ga0501037_0009235 3300049573 Bacteria 7229
122 Ga0501037_0009622 3300049573 Bacteria 7092
123 Ga0501037_0051705 3300049573 Bacteria 3005
124 Ga0501037_0097957 3300049573 Bacteria 2119
125 Ga0501038_0005298 3300049574 Bacteria 11982
126 Ga0501038_0008441 3300049574 Bacteria 9474
127 Ga0501038_0012129 3300049574 Bacteria 7871
128 Ga0501038_0057525 3300049574 Bacteria 3338
129 Ga0501039_0034518 3300049575 Bacteria 3904
130 Ga0501040_0007449 3300049576 Bacteria 7088
131 Ga0501041_0000669 3300049577 Bacteria 18120
132 Ga0501042_0004096 3300049578 Bacteria 9257
133 Ga0501043_0003174 3300049579 Bacteria 13596
134 Ga0501043_0067788 3300049579 Bacteria 2802
135 Ga0501046_0001837 3300049580 Bacteria 20235
136 Ga0501046_0003734 3300049580 Bacteria 13936
137 Ga0501047_0025829 3300049581 Bacteria 5648
138 Ga0501048_0020717 3300049582 Bacteria 4820
139 Ga0501067_0016425 3300049583 Bacteria 4089
140 Ga0501068_0023140 3300049584 Bacteria 3639
141 Ga0501070_0015374 3300049586 Bacteria 6438
142 Ga0501071_0007009 3300049587 Bacteria 7361
143 Ga0501073_0001201 3300049589 Bacteria 18879
144 Ga0501074_0003940 3300049590 Bacteria 10578
145 Ga0501074_0010511 3300049590 Bacteria 6719
146 Ga0501075_0011597 3300049591 Bacteria 6240
147 Ga0501076_0011118 3300049592 Bacteria 6696
148 Ga0501077_0002239 3300049593 Bacteria 11660
149 Ga0501077_0134683 3300049593 Bacteria 1567
150 Ga0501079_0001233 3300049741 Bacteria 17913
151 Ga0501079_0019909 3300049741 Bacteria 5126
152 Ga0501079_0114937 3300049741 Bacteria 2092
153 Ga0501080_0010087 3300049742 Bacteria 8635
154 Ga0501080_0010778 3300049742 Bacteria 8365
155 Ga0501083_0015064 3300049744 Bacteria 5411
156 Ga0501035_0006032 3300049822 Bacteria 11409
157 Ga0501035_0088219 3300049822 Bacteria 2733
158 Ga0501044_0035699 3300049823 Bacteria 5204
159 Ga0501045_0001481 3300049824 Bacteria 15605
160 nmdc:mga09592_167796_c1 3300050508 Bacteria 1898
161 nmdc:mga0qj67_19321_c1 3300050509 Bacteria 5204
162 nmdc:mga06r32_108372_c1 3300050510 Bacteria 2731
163 nmdc:mga06r32_12739_c1 3300050510 Bacteria 7602
164 nmdc:mga08y16_12390_c1 3300050511 Bacteria 8968
165 nmdc:mga08y16_499837_c1 3300050511 Bacteria 1235
166 Ga0501084_0001963 3300054114 Bacteria 16428
167 Ga0501082_0020524 3300060353 Bacteria 5694
168 Ga0530510_0018241 3300061734 Bacteria 4975

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8054558443 8054561666 334
2 3300009094 Ga0111539_10013797 Ga0111539_100137978 335
3 3300027907 Ga0207428_10013054 Ga0207428_100130545 335
4 3300050511 nmdc:mga08y16_12390_c1 nmdc:mga08y16_12390_c1_5075_6334 335
5 3300049741 Ga0501079_0114937 Ga0501079_0114937_44_1288 343
6 3300044901 Ga0466960_0018941 Ga0466960_0018941_356_1507 351
7 3300045976 Ga0466967_0068405 Ga0466967_0068405_1396_2526 359
8 3300009094 Ga0111539_10445347 Ga0111539_104453471 361
9 3300009147 Ga0114129_10586419 Ga0114129_105864192 361
10 3300050511 nmdc:mga08y16_499837_c1 nmdc:mga08y16_499837_c1_11_1168 364
11 3300031995 Ga0307409_100020215 Ga0307409_1000202152 365
12 3300048929 Ga0496126_0000626 Ga0496126_0000626_46089_47258 365
13 3300032002 Ga0307416_100145646 Ga0307416_1001456463 370
14 3300006844 Ga0075428_100155864 Ga0075428_1001558642 371
15 3300025925 Ga0207650_10177579 Ga0207650_101775792 371
16 3300049569 Ga0501032_0011562 Ga0501032_0011562_830_2098 371
17 3300049571 Ga0501034_0141485 Ga0501034_0141485_906_2174 371
18 3300049574 Ga0501038_0012129 Ga0501038_0012129_4943_6211 371
19 3300049575 Ga0501039_0034518 Ga0501039_0034518_2274_3542 371
20 3300005331 Ga0070670_100222925 Ga0070670_1002229252 372
21 3300046492 Ga0495585_0023964 Ga0495585_0023964_1289_2482 372
22 3300006844 Ga0075428_100167099 Ga0075428_1001670991 373
23 3300006846 Ga0075430_100020902 Ga0075430_1000209026 373
24 3300006847 Ga0075431_100164306 Ga0075431_1001643063 373
25 3300006880 Ga0075429_100017354 Ga0075429_1000173546 373
26 3300048927 Ga0496124_0000790 Ga0496124_0000790_35574_36767 373
27 3300048928 Ga0496125_0035505 Ga0496125_0035505_1273_2466 373
28 3300050508 nmdc:mga09592_167796_c1 nmdc:mga09592_167796_c1_75_1259 373
29 3300050509 nmdc:mga0qj67_19321_c1 nmdc:mga0qj67_19321_c1_3208_4392 373
30 3300050510 nmdc:mga06r32_108372_c1 nmdc:mga06r32_108372_c1_802_1986 373
31 3300025291 Ga0209675_1009279 Ga0209675_10092793 374
32 3300025292 Ga0209676_1011884 Ga0209676_10118844 374
33 3300049572 Ga0501036_0122957 Ga0501036_0122957_110_1366 374
34 3300049574 Ga0501038_0057525 Ga0501038_0057525_1648_2904 374
35 3300049581 Ga0501047_0025829 Ga0501047_0025829_3520_4776 374
36 3300049823 Ga0501044_0035699 Ga0501044_0035699_509_1765 374
37 iso_pu_bacteria 2895427314 2895434145 375
38 3300045051 Ga0451576_0000147 Ga0451576_0000147_68433_69710 376
39 3300031247 Ga0265340_10016567 Ga0265340_100165674 377
40 3300031249 Ga0265339_10006903 Ga0265339_100069037 377
41 3300031344 Ga0265316_10089859 Ga0265316_100898592 377
42 3300031595 Ga0265313_10000181 Ga0265313_1000018142 377
43 3300031712 Ga0265342_10005915 Ga0265342_100059158 377
44 3300049593 Ga0501077_0134683 Ga0501077_0134683_347_1552 378
45 3300037471 Ga0395905_0017781 Ga0395905_0017781_1474_2739 382
46 3300005436 Ga0070713_100019898 Ga0070713_1000198986 385
47 3300048914 Ga0496111_0040895 Ga0496111_0040895_786_2012 386
48 iso_pu_bacteria 2891373044 2891375656 388
49 iso_pu_bacteria 2989771324 2989776538 388
50 iso_pu_bacteria 2867369537 2867369579 389
51 iso_pu_bacteria 2939660829 2939662040 389
52 iso_pu_bacteria 2929199973 2929203917 390
53 iso_pu_bacteria 8055909800 8055912935 390
54 3300025944 Ga0207661_10174970 Ga0207661_101749702 391
55 3300049573 Ga0501037_0097957 Ga0501037_0097957_383_1624 391
56 iso_pu_bacteria 2510917026 2511172526 391
57 iso_pu_bacteria 2738541293 2738803998 391
58 3300005548 Ga0070665_100238726 Ga0070665_1002387262 392
59 3300009094 Ga0111539_10013763 Ga0111539_1001376310 392
60 3300028379 Ga0268266_10253570 Ga0268266_102535702 392
61 3300031901 Ga0307406_10027838 Ga0307406_100278383 392
62 3300048920 Ga0496117_0003421 Ga0496117_0003421_2787_4037 392
63 3300048925 Ga0496122_0001238 Ga0496122_0001238_39799_41049 392
64 3300048926 Ga0496123_0001005 Ga0496123_0001005_39812_41062 392
65 3300048928 Ga0496125_0000765 Ga0496125_0000765_39412_40662 392
66 iso_pu_bacteria 2513237144 2513910860 392
67 iso_pu_bacteria 2513237146 2513927221 392
68 iso_pu_bacteria 2599185170 2599415338 392
69 iso_pu_bacteria 2599185236 2599717909 392
70 iso_pu_bacteria 2821443989 2821450979 392
71 iso_pu_bacteria 2838035591 2838038937 392
72 iso_pu_bacteria 2838661181 2838664473 392
73 iso_pu_bacteria 2874123672 2874123954 392
74 iso_pu_bacteria 2882456835 2882459958 392
75 iso_pu_bacteria 2885305155 2885305871 392
76 iso_pu_bacteria 2933016740 2933022956 392
77 iso_pu_bacteria 3005409236 3005413792 392
78 3300026142 Ga0207698_10062933 Ga0207698_100629332 393
79 3300049568 Ga0501031_0011345 Ga0501031_0011345_1710_2963 393
80 3300049569 Ga0501032_0035814 Ga0501032_0035814_165_1418 393
81 3300049573 Ga0501037_0009235 Ga0501037_0009235_2693_3946 393
82 3300049574 Ga0501038_0005298 Ga0501038_0005298_1851_3104 393
83 3300049576 Ga0501040_0007449 Ga0501040_0007449_5798_7051 393
84 3300049577 Ga0501041_0000669 Ga0501041_0000669_10957_12210 393
85 3300049578 Ga0501042_0004096 Ga0501042_0004096_2287_3540 393
86 3300049579 Ga0501043_0067788 Ga0501043_0067788_1338_2591 393
87 3300049580 Ga0501046_0003734 Ga0501046_0003734_8206_9459 393
88 3300049582 Ga0501048_0020717 Ga0501048_0020717_1967_3220 393
89 3300049584 Ga0501068_0023140 Ga0501068_0023140_167_1420 393
90 3300049587 Ga0501071_0007009 Ga0501071_0007009_376_1629 393
91 3300049590 Ga0501074_0010511 Ga0501074_0010511_2821_4074 393
92 3300049591 Ga0501075_0011597 Ga0501075_0011597_1655_2908 393
93 3300049592 Ga0501076_0011118 Ga0501076_0011118_3005_4258 393
94 3300049593 Ga0501077_0002239 Ga0501077_0002239_5704_6957 393
95 3300049741 Ga0501079_0001233 Ga0501079_0001233_6882_8135 393
96 3300049742 Ga0501080_0010778 Ga0501080_0010778_4305_5558 393
97 3300049824 Ga0501045_0001481 Ga0501045_0001481_4793_6046 393
98 3300054114 Ga0501084_0001963 Ga0501084_0001963_8987_10240 393
99 3300060353 Ga0501082_0020524 Ga0501082_0020524_2147_3400 393
100 3300061734 Ga0530510_0018241 Ga0530510_0018241_449_1702 393
101 iso_pu_bacteria 2693429783 2694630790 393
102 iso_pu_bacteria 2693429784 2694634844 393
103 iso_pu_bacteria 2889010040 2889013315 393
104 iso_pu_bacteria 2906354277 2906357363 393
105 iso_pu_bacteria 2922185730 2922194018 393
106 iso_pu_bacteria 2938014810 2938017188 393
107 3300048929 Ga0496126_0074444 Ga0496126_0074444_779_2026 394
108 iso_pu_bacteria 2842509118 2842513317 394
109 iso_pu_bacteria 2847670302 2847672607 394
110 iso_pu_bacteria 2856314179 2856315170 394
111 iso_pu_bacteria 2878035449 2878041975 394
112 iso_pu_bacteria 2906414383 2906415167 394
113 iso_pu_bacteria 8055431914 8055432627 394
114 3300002773 JGI25152J39213_1000009 JGI25152J39213_100000975 395
115 3300002774 JGI25150J39212_1000016 JGI25150J39212_100001659 395
116 3300003187 JGI25151J46595_10000073 JGI25151J46595_1000007374 395
117 3300003215 JGI25153J46596_10003494 JGI25153J46596_100034944 395
118 3300005344 Ga0070661_100052331 Ga0070661_1000523312 395
119 3300005530 Ga0070679_100087936 Ga0070679_1000879363 395
120 3300005616 Ga0068852_100033315 Ga0068852_1000333155 395
121 3300009093 Ga0105240_10249215 Ga0105240_102492152 395
122 3300013104 Ga0157370_10306367 Ga0157370_103063671 395
123 3300013105 Ga0157369_10001813 Ga0157369_100018134 395
124 3300021384 Ga0213876_10021253 Ga0213876_100212532 395
125 3300025245 Ga0207425_1000054 Ga0207425_100005460 395
126 3300025258 Ga0209129_1000108 Ga0209129_100010860 395
127 3300025294 Ga0209025_1000189 Ga0209025_100018960 395
128 3300025297 Ga0209758_1000162 Ga0209758_100016294 395
129 3300037418 Ga0395900_0052817 Ga0395900_0052817_2543_3820 395
130 3300037418 Ga0395900_0258534 Ga0395900_0258534_355_1650 395
131 3300037471 Ga0395905_0016532 Ga0395905_0016532_2295_3572 395
132 3300037471 Ga0395905_0125737 Ga0395905_0125737_198_1475 395
133 3300048919 Ga0496116_0031982 Ga0496116_0031982_1072_2340 395
134 3300048921 Ga0496118_0052435 Ga0496118_0052435_214_1482 395
135 3300048924 Ga0496121_0026271 Ga0496121_0026271_135_1403 395
136 3300048928 Ga0496125_0148600 Ga0496125_0148600_327_1595 395
137 3300049571 Ga0501034_0056105 Ga0501034_0056105_1844_3097 395
138 iso_pu_bacteria 8018150411 8018152675 395
139 3300002773 JGI25152J39213_1011958 JGI25152J39213_10119582 396
140 3300003763 Ga0055529_1003759 Ga0055529_10037591 396
141 3300005262 Ga0065165_1008347 Ga0065165_10083472 396
142 3300005327 Ga0070658_10015487 Ga0070658_100154876 396
143 3300005339 Ga0070660_100020139 Ga0070660_1000201392 396
144 3300005353 Ga0070669_100159666 Ga0070669_1001596661 396
145 3300005367 Ga0070667_100146187 Ga0070667_1001461871 396
146 3300005530 Ga0070679_100099261 Ga0070679_1000992612 396
147 3300005548 Ga0070665_100186229 Ga0070665_1001862292 396
148 3300005563 Ga0068855_100057902 Ga0068855_1000579023 396
149 3300025254 Ga0209148_1002599 Ga0209148_10025992 396
150 3300025258 Ga0209129_1000016 Ga0209129_1000016332 396
151 3300025272 Ga0209455_1002594 Ga0209455_10025945 396
152 3300025294 Ga0209025_1000126 Ga0209025_100012666 396
153 3300025303 Ga0209051_1006374 Ga0209051_10063743 396
154 3300025909 Ga0207705_10035206 Ga0207705_100352062 396
155 3300025919 Ga0207657_10004938 Ga0207657_100049389 396
156 3300025922 Ga0207646_10005672 Ga0207646_1000567212 396
157 3300025923 Ga0207681_10120418 Ga0207681_101204182 396
158 3300025949 Ga0207667_10070530 Ga0207667_100705302 396
159 3300025986 Ga0207658_10087759 Ga0207658_100877592 396
160 3300028379 Ga0268266_10037298 Ga0268266_100372983 396
161 3300031241 Ga0265325_10004296 Ga0265325_100042967 396
162 3300031728 Ga0316578_10045340 Ga0316578_100453402 396
163 3300031733 Ga0316577_10000250 Ga0316577_100002502 396
164 3300036647 Ga0316582_0045202 Ga0316582_0045202_665_1948 396
165 3300036712 Ga0316584_0002048 Ga0316584_0002048_1036_2319 396
166 3300037471 Ga0395905_0070866 Ga0395905_0070866_1395_2678 396
167 3300038443 Ga0395901_0002399 Ga0395901_0002399_10706_11989 396
168 3300041413 Ga0439465_0004054 Ga0439465_0004054_524_1897 396
169 3300042438 Ga0439459_0008352 Ga0439459_0008352_85_1353 396
170 3300048923 Ga0496120_0029617 Ga0496120_0029617_62_1363 396
171 3300049569 Ga0501032_0001879 Ga0501032_0001879_839_2107 396
172 3300049570 Ga0501033_0023465 Ga0501033_0023465_23_1291 396
173 3300049572 Ga0501036_0013235 Ga0501036_0013235_4809_6077 396
174 3300049572 Ga0501036_0108654 Ga0501036_0108654_1023_2279 396
175 3300049573 Ga0501037_0009622 Ga0501037_0009622_3262_4530 396
176 3300049573 Ga0501037_0051705 Ga0501037_0051705_831_2087 396
177 3300049574 Ga0501038_0008441 Ga0501038_0008441_2015_3283 396
178 3300049579 Ga0501043_0003174 Ga0501043_0003174_8374_9642 396
179 3300049580 Ga0501046_0001837 Ga0501046_0001837_1925_3193 396
180 3300049583 Ga0501067_0016425 Ga0501067_0016425_1291_2559 396
181 3300049586 Ga0501070_0015374 Ga0501070_0015374_1641_2909 396
182 3300049589 Ga0501073_0001201 Ga0501073_0001201_14676_15944 396
183 3300049590 Ga0501074_0003940 Ga0501074_0003940_6649_7917 396
184 3300049741 Ga0501079_0019909 Ga0501079_0019909_1667_2935 396
185 3300049742 Ga0501080_0010087 Ga0501080_0010087_6966_8234 396
186 3300049744 Ga0501083_0015064 Ga0501083_0015064_295_1563 396
187 3300049822 Ga0501035_0006032 Ga0501035_0006032_3695_4963 396
188 3300049822 Ga0501035_0088219 Ga0501035_0088219_564_1820 396
189 3300006844 Ga0075428_100280341 Ga0075428_1002803411 397
190 3300013307 Ga0157372_10007776 Ga0157372_100077766 397
191 3300048914 Ga0496111_0010697 Ga0496111_0010697_3104_4369 397
192 3300048928 Ga0496125_0000955 Ga0496125_0000955_20214_21479 397
193 3300050510 nmdc:mga06r32_12739_c1 nmdc:mga06r32_12739_c1_2295_3554 397
194 3300002076 JGI24749J21850_1000008 JGI24749J21850_100000820 399
195 3300005367 Ga0070667_100000851 Ga0070667_1000008512 399
196 3300005617 Ga0068859_100005767 Ga0068859_10000576710 399
197 3300005719 Ga0068861_100000333 Ga0068861_10000033312 399
198 3300006931 Ga0097620_100005767 Ga0097620_10000576710 399
199 3300009177 Ga0105248_10000157 Ga0105248_1000015732 399
200 3300025941 Ga0207711_10004750 Ga0207711_1000475010 399
201 3300025986 Ga0207658_10005952 Ga0207658_100059524 399
202 3300026035 Ga0207703_10208165 Ga0207703_102081652 399
203 3300026118 Ga0207675_100001097 Ga0207675_10000109712 399

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07005

SBD_N

Sugar-binding N-terminal domain

31

257

0.96

PF17042

NBD_C

Nucleotide-binding C-terminal domain

284

441

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xg0-assembly1.cif.gz_A crystal structure of a domain of unknown function (duf1537) from bordetella bronchiseptica (bb3215), target efi-511620, with bound citrate, domain swapped dimer, space group c2221 0.6807 2 398
4xg0-assembly1.cif.gz_A crystal structure of a domain of unknown function (duf1537) from bordetella bronchiseptica (bb3215), target efi-511620, with bound citrate, domain swapped dimer, space group c2221 0.6672 2 398
4xfr-assembly1.cif.gz_A crystal structure of a domain of unknown function (duf1537) from bordetella bronchiseptica (bb3215), target efi-511620, with bound citrate, domain swapped dimer, space group p6522 0.659 1 398
4xfr-assembly1.cif.gz_A crystal structure of a domain of unknown function (duf1537) from bordetella bronchiseptica (bb3215), target efi-511620, with bound citrate, domain swapped dimer, space group p6522 0.6527 1 398
6hk6-assembly4.cif.gz_G human riok2 bound to inhibitor 0.6334 342 386
ID Description Score Start End Superfamily
5dmhB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Putative sugar-binding, N-terminal domain 0.9498 2 222 3.40.50.10840
af_Q46889_243_386_3.40.980.20 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;Four-carbon acid sugar kinase, nucleotide binding domain 0.9169 230 361 3.40.980.20
3dqqB02 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;Four-carbon acid sugar kinase, nucleotide binding domain 0.914 230 394 3.40.980.20
5dmhB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Putative sugar-binding, N-terminal domain 0.874 2 222 3.40.50.10840
5dmhA02 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;Four-carbon acid sugar kinase, nucleotide binding domain 0.864 226 399 3.40.980.20
ID Description Score Start End GO Terms
AF-A0A6N7FRM5-F1-model_v4 Four-carbon acid sugar kinase nucleotide binding domain-containing protein 0.9779 315 398
AF-A0A0F9R416-F1-model_v4 Four-carbon acid sugar kinase N-terminal domain-containing protein 0.9769 1 200
AF-A0A317C029-F1-model_v4 Four-carbon acid sugar kinase N-terminal domain-containing protein 0.9754 1 200
AF-A0A5R2N6G4-F1-model_v4 Four-carbon acid sugar kinase family protein 0.9749 92 221 GO:0016301
AF-A0A435FZW2-F1-model_v4 Four-carbon acid sugar kinase family protein 0.9727 1 169 GO:0016301

Feature Viewer

pLDDT pTM Quality
89.96 0.62 Medium
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Predicted Structure (AlphaFold2)

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