F311386

General Info

Members Datasets Scaffolds Average Seq Length
203 113 406 455

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10000806|Ga0265340_100008064
Length 549
Sequence MPVKPRHRSNLLLHTTADTAYTFVNPESFNKLLRLWTLGGSKGEWFVSESRLVDKWACSPICPAWFENLFRRPVDSTSLALVASEPHKNHAETPVLRGNTAEGGPRILIVDDDPGQRSLLNSFLRSQGFETSLADSGERALEMLRSGNFAMMISDVRMPGLSGLETLRRARQEPRTAGLPVLLVTAFTDIRDAVAAMRDGAVNYLAKPIDLDELLNSVRQATGLSKAVPLQYNEEKPLPDFVVARSPLMQTVFRDASLIAPSETRVLITGESGVGKEVVADVLHAWSLRAAGPMIKVNCAAIPETLLEAELFGHEKGSFTGAHARRIGRFEEANDGTIFLDEVAEMSPALQAKLLRVTQDGRFQRVGANREIHTNARILAASNRNLEDEVKSGRFREDLFYRLNVVELNVPPLRERREDILPLAGRFIEEIAKGRARFSDTVTACLERYPWPGNVRELRNAMERAVLLSRSELILPEHLPTRVRAAADNPPPPETADVERLAEIERQAIVQALRQHDFNRTETAKALGISRRALLYKLQRFRELGYQVE

Samples

Sample ID Description Type Environment
1 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
41 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
42 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
43 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
44 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
45 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
46 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
49 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
50 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
51 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
52 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
53 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
54 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
63 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
64 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
65 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
66 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
67 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
68 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
69 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
70 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
85 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
86 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
87 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
90 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
91 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
92 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
93 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
94 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
95 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
96 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
97 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
98 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
105 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
111 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.49
Rhizosphere 99.51
Stem 0
Stem Tuber 0
Unclassified 0.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265340_10000806 3300031247 Bacteria 17772
2 Ga0070689_100054962 3300005340 Bacteria 3083
3 Ga0070689_100070575 3300005340 Bacteria 2728
4 Ga0070714_100040514 3300005435 Bacteria 3926
5 Ga0070701_10025462 3300005438 Bacteria 2874
6 Ga0070708_100068057 3300005445 Bacteria 3200
7 Ga0070681_10005151 3300005458 Bacteria 12610
8 Ga0070685_10101300 3300005466 Bacteria 1759
9 Ga0070707_100034222 3300005468 Bacteria 4846
10 Ga0070698_100036340 3300005471 Bacteria 5089
11 Ga0070699_100004790 3300005518 Bacteria 11961
12 Ga0070686_100002271 3300005544 Bacteria 10605
13 Ga0070704_100002338 3300005549 Bacteria 10633
14 Ga0068855_100141611 3300005563 Bacteria 2740
15 Ga0068857_100001544 3300005577 Bacteria 18430
16 Ga0068856_100062790 3300005614 Bacteria 3669
17 Ga0068859_100219182 3300005617 Unclassified 1990
18 Ga0068864_100278233 3300005618 Bacteria 1561
19 Ga0068863_100065412 3300005841 Bacteria 3440
20 Ga0070717_10000164 3300006028 Bacteria 50120
21 Ga0097620_100219178 3300006931 Unclassified 1990
22 Ga0105240_10005994 3300009093 Bacteria 17972
23 Ga0105240_10036813 3300009093 Bacteria 6292
24 Ga0105245_10105878 3300009098 Bacteria 2609
25 Ga0105242_10143144 3300009176 Bacteria 2077
26 Ga0105238_10035217 3300009551 Bacteria 5091
27 Ga0157370_10150446 3300013104 Bacteria 2166
28 Ga0157375_10000027 3300013308 Bacteria 220909
29 Ga0163163_10000018 3300014325 Bacteria 199503
30 Ga0157376_10034717 3300014969 Bacteria 4075
31 Ga0207707_10188973 3300025912 Bacteria 1797
32 Ga0207695_10004936 3300025913 Bacteria 17974
33 Ga0207695_10121029 3300025913 Bacteria 2585
34 Ga0207646_10033960 3300025922 Bacteria 4610
35 Ga0207694_10010080 3300025924 Bacteria 7123
36 Ga0207694_10087458 3300025924 Bacteria 2455
37 Ga0207664_10001413 3300025929 Bacteria 15799
38 Ga0207670_10006343 3300025936 Bacteria 6554
39 Ga0207670_10076107 3300025936 Bacteria 2335
40 Ga0207667_10042376 3300025949 Bacteria 4839
41 Ga0207667_10045581 3300025949 Bacteria 4643
42 Ga0207639_10140436 3300026041 Bacteria 2012
43 Ga0207702_10010698 3300026078 Bacteria 7665
44 Ga0207702_10020330 3300026078 Bacteria 5499
45 Ga0207641_10024898 3300026088 Bacteria 4934
46 Ga0207674_10013620 3300026116 Bacteria 9008
47 Ga0265337_1000018 3300028556 Bacteria 76481
48 Ga0265337_1000741 3300028556 Bacteria 17221
49 Ga0265337_1003073 3300028556 Bacteria 7364
50 Ga0265326_10002329 3300028558 Bacteria 6414
51 Ga0265326_10004678 3300028558 Bacteria 4363
52 Ga0265319_1002832 3300028563 Bacteria 9269
53 Ga0265334_10009399 3300028573 Bacteria 4136
54 Ga0265334_10011248 3300028573 Bacteria 3772
55 Ga0265323_10000016 3300028653 Bacteria 96953
56 Ga0265323_10000320 3300028653 Bacteria 27737
57 Ga0265323_10003337 3300028653 Bacteria 7119
58 Ga0265323_10003585 3300028653 Bacteria 6819
59 Ga0265323_10004062 3300028653 Bacteria 6344
60 Ga0265323_10019643 3300028653 Bacteria 2605
61 Ga0265322_10000232 3300028654 Bacteria 24091
62 Ga0265336_10001722 3300028666 Bacteria 9608
63 Ga0265336_10017068 3300028666 Bacteria 2366
64 Ga0265338_10000237 3300028800 Bacteria 101850
65 Ga0265338_10000248 3300028800 Bacteria 98976
66 Ga0265338_10000398 3300028800 Bacteria 77989
67 Ga0265338_10001023 3300028800 Bacteria 46910
68 Ga0265338_10002009 3300028800 Bacteria 31571
69 Ga0265338_10002169 3300028800 Bacteria 30159
70 Ga0265338_10002568 3300028800 Bacteria 26849
71 Ga0265338_10003701 3300028800 Bacteria 21286
72 Ga0265338_10003919 3300028800 Bacteria 20532
73 Ga0265338_10004977 3300028800 Bacteria 17594
74 Ga0265338_10009758 3300028800 Bacteria 11386
75 Ga0265338_10013543 3300028800 Bacteria 9194
76 Ga0265338_10019144 3300028800 Bacteria 7284
77 Ga0265338_10022817 3300028800 Bacteria 6459
78 Ga0265338_10033507 3300028800 Bacteria 4982
79 Ga0265338_10084128 3300028800 Bacteria 2657
80 Ga0265338_10122314 3300028800 Bacteria 2071
81 Ga0265324_10000113 3300029957 Bacteria 64194
82 Ga0265324_10000421 3300029957 Bacteria 30438
83 Ga0265330_10036984 3300031235 Bacteria 2174
84 Ga0265330_10052998 3300031235 Bacteria 1776
85 Ga0265328_10020025 3300031239 Bacteria 2564
86 Ga0265320_10000830 3300031240 Bacteria 23320
87 Ga0265320_10003956 3300031240 Bacteria 9776
88 Ga0265320_10006571 3300031240 Bacteria 7312
89 Ga0265320_10040053 3300031240 Bacteria 2339
90 Ga0265325_10021293 3300031241 Bacteria 3563
91 Ga0265329_10007820 3300031242 Bacteria 4101
92 Ga0265339_10002854 3300031249 Bacteria 12264
93 Ga0265339_10012036 3300031249 Bacteria 5302
94 Ga0265327_10003981 3300031251 Bacteria 13476
95 Ga0265327_10043625 3300031251 Bacteria 2398
96 Ga0265316_10000797 3300031344 Bacteria 34790
97 Ga0265316_10004023 3300031344 Bacteria 14721
98 Ga0265316_10019673 3300031344 Bacteria 5766
99 Ga0265316_10032814 3300031344 Bacteria 4235
100 Ga0265316_10042382 3300031344 Bacteria 3638
101 Ga0265316_10054182 3300031344 Bacteria 3141
102 Ga0265316_10057926 3300031344 Bacteria 3020
103 Ga0265316_10064123 3300031344 Bacteria 2846
104 Ga0307408_100050845 3300031548 Bacteria 2982
105 Ga0265313_10005323 3300031595 Bacteria 9508
106 Ga0265313_10011286 3300031595 Bacteria 5565
107 Ga0265313_10012076 3300031595 Bacteria 5318
108 Ga0265313_10076887 3300031595 Bacteria 1525
109 Ga0265314_10000142 3300031711 Bacteria 108299
110 Ga0265314_10014626 3300031711 Bacteria 6266
111 Ga0265314_10025946 3300031711 Bacteria 4411
112 Ga0265342_10005817 3300031712 Bacteria 9311
113 Ga0265342_10024647 3300031712 Bacteria 3795
114 Ga0265342_10036288 3300031712 Bacteria 3012
115 Ga0265342_10056255 3300031712 Bacteria 2332
116 Ga0307409_100010763 3300031995 Bacteria 5715
117 Ga0373930_0006453 3300034816 Bacteria 1984
118 Ga0373928_0000647 3300035084 Bacteria 6842
119 Ga0373929_0000104 3300035085 Bacteria 13886
120 Ga0373944_0003464 3300035089 Bacteria 4075
121 Ga0373949_0001479 3300035090 Bacteria 6702
122 Ga0373951_0006128 3300035091 Bacteria 2762
123 Ga0373932_0000001 3300035112 Bacteria 1459067
124 Ga0373945_0017153 3300035116 Bacteria 2450
125 Ga0373954_0014426 3300035118 Bacteria 3523
126 Ga0373956_0049258 3300035119 Bacteria 1889
127 Ga0373962_0000005 3300035242 Bacteria 63923
128 Ga0373931_0000008 3300035691 Bacteria 362269
129 Ga0373927_0008328 3300035695 Bacteria 6981
130 Ga0373927_0023101 3300035695 Bacteria 4073
131 Ga0373927_0025715 3300035695 Bacteria 3848
132 Ga0373927_0092179 3300035695 Bacteria 1968
133 Ga0373933_0045365 3300035724 Bacteria 2606
134 Ga0373947_0010670 3300035725 Bacteria 5273
135 Ga0373937_0065694 3300036401 Bacteria 3340
136 Ga0373925_0000192 3300037068 Bacteria 66343
137 Ga0373925_0000775 3300037068 Bacteria 29377
138 Ga0373925_0067005 3300037068 Bacteria 2707
139 Ga0451577_0000115 3300042876 Bacteria 175768
140 Ga0451577_0000289 3300042876 Bacteria 97928
141 Ga0451577_0008552 3300042876 Bacteria 9953
142 Ga0451577_0125097 3300042876 Bacteria 2304
143 Ga0453684_0002080 3300044712 Bacteria 50813
144 Ga0453684_0002551 3300044712 Bacteria 43788
145 Ga0453684_0003259 3300044712 Bacteria 37091
146 Ga0453684_0032179 3300044712 Bacteria 7349
147 Ga0453684_0102938 3300044712 Bacteria 3490
148 Ga0451576_0031779 3300045051 Bacteria 5626
149 Ga0451576_0301573 3300045051 Bacteria 1676
150 Ga0451576_0339639 3300045051 Bacteria 1572
151 Ga0451576_0347066 3300045051 Bacteria 1554
152 Ga0495592_0000167 3300046454 Bacteria 58650
153 Ga0495592_0023136 3300046454 Bacteria 4726
154 Ga0495629_0046367 3300046459 Bacteria 3049
155 Ga0495662_0024257 3300046476 Bacteria 2927
156 Ga0495664_0009410 3300046477 Bacteria 5467
157 Ga0495664_0036747 3300046477 Bacteria 2888
158 Ga0495618_0001379 3300046514 Bacteria 16339
159 Ga0495628_0000574 3300046516 Bacteria 33726
160 Ga0495628_0125699 3300046516 Bacteria 1965
161 Ga0495630_0000076 3300046517 Bacteria 77289
162 Ga0495630_0006100 3300046517 Bacteria 8544
163 Ga0495630_0011661 3300046517 Bacteria 6369
164 Ga0495630_0067392 3300046517 Bacteria 2691
165 Ga0495666_0011694 3300046526 Bacteria 4376
166 Ga0495652_0136322 3300046529 Bacteria 1936
167 Ga0495640_0055100 3300046533 Bacteria 2721
168 Ga0495586_0000001 3300046535 Bacteria 231314
169 Ga0495586_0000173 3300046535 Bacteria 42356
170 Ga0495586_0003529 3300046535 Bacteria 8385
171 Ga0495586_0092480 3300046535 Bacteria 1672
172 Ga0495587_0093808 3300046536 Bacteria 1733
173 Ga0495645_0031527 3300046543 Bacteria 3863
174 Ga0495634_0002733 3300046642 Bacteria 14507
175 Ga0495634_0036328 3300046642 Bacteria 3369
176 Ga0495599_0003902 3300046678 Bacteria 8774
177 Ga0495599_0021218 3300046678 Bacteria 4051
178 Ga0495658_0003361 3300046683 Bacteria 7928
179 Ga0495658_0011716 3300046683 Bacteria 4418
180 Ga0495669_0050170 3300046684 Bacteria 1871
181 Ga0495613_0009597 3300046689 Bacteria 7189
182 Ga0495624_0030115 3300046690 Bacteria 3537
183 Ga0495674_0000207 3300047319 Bacteria 48305
184 Ga0495674_0004690 3300047319 Bacteria 13147
185 Ga0495674_0013269 3300047319 Bacteria 7748
186 Ga0495676_0016423 3300047321 Bacteria 6571
187 Ga0495680_0022287 3300047322 Bacteria 5282
188 Ga0496107_0029424 3300048910 Bacteria 3907
189 Ga0501031_0017059 3300049568 Bacteria 4716
190 Ga0501032_0007180 3300049569 Bacteria 8150
191 Ga0501033_0017339 3300049570 Bacteria 5442
192 Ga0501033_0146407 3300049570 Bacteria 1705
193 Ga0501037_0036447 3300049573 Bacteria 3625
194 Ga0501037_0066186 3300049573 Bacteria 2633
195 Ga0501043_0139575 3300049579 Bacteria 1898
196 Ga0501083_0001162 3300049744 Bacteria 17722
197 Ga0501083_0003264 3300049744 Bacteria 11322
198 Ga0501035_0020057 3300049822 Bacteria 6140
199 Ga0501035_0069767 3300049822 Bacteria 3114
200 Ga0501044_0007157 3300049823 Bacteria 12273
201 Ga0501044_0030824 3300049823 Bacteria 5648
202 Ga0501044_0175451 3300049823 Bacteria 2112
203 Ga0501082_0300434 3300060353 Bacteria 1398
204 Ga0265340_10000806
205 Ga0070689_100054962
206 Ga0070689_100070575
207 Ga0070714_100040514
208 Ga0070701_10025462
209 Ga0070708_100068057
210 Ga0070681_10005151
211 Ga0070685_10101300
212 Ga0070707_100034222
213 Ga0070698_100036340
214 Ga0070699_100004790
215 Ga0070686_100002271
216 Ga0070704_100002338
217 Ga0068855_100141611
218 Ga0068857_100001544
219 Ga0068856_100062790
220 Ga0068859_100219182
221 Ga0068864_100278233
222 Ga0068863_100065412
223 Ga0070717_10000164
224 Ga0097620_100219178
225 Ga0105240_10005994
226 Ga0105240_10036813
227 Ga0105245_10105878
228 Ga0105242_10143144
229 Ga0105238_10035217
230 Ga0157370_10150446
231 Ga0157375_10000027
232 Ga0163163_10000018
233 Ga0157376_10034717
234 Ga0207707_10188973
235 Ga0207695_10004936
236 Ga0207695_10121029
237 Ga0207646_10033960
238 Ga0207694_10010080
239 Ga0207694_10087458
240 Ga0207664_10001413
241 Ga0207670_10006343
242 Ga0207670_10076107
243 Ga0207667_10042376
244 Ga0207667_10045581
245 Ga0207639_10140436
246 Ga0207702_10010698
247 Ga0207702_10020330
248 Ga0207641_10024898
249 Ga0207674_10013620
250 Ga0265337_1000018
251 Ga0265337_1000741
252 Ga0265337_1003073
253 Ga0265326_10002329
254 Ga0265326_10004678
255 Ga0265319_1002832
256 Ga0265334_10009399
257 Ga0265334_10011248
258 Ga0265323_10000016
259 Ga0265323_10000320
260 Ga0265323_10003337
261 Ga0265323_10003585
262 Ga0265323_10004062
263 Ga0265323_10019643
264 Ga0265322_10000232
265 Ga0265336_10001722
266 Ga0265336_10017068
267 Ga0265338_10000237
268 Ga0265338_10000248
269 Ga0265338_10000398
270 Ga0265338_10001023
271 Ga0265338_10002009
272 Ga0265338_10002169
273 Ga0265338_10002568
274 Ga0265338_10003701
275 Ga0265338_10003919
276 Ga0265338_10004977
277 Ga0265338_10009758
278 Ga0265338_10013543
279 Ga0265338_10019144
280 Ga0265338_10022817
281 Ga0265338_10033507
282 Ga0265338_10084128
283 Ga0265338_10122314
284 Ga0265324_10000113
285 Ga0265324_10000421
286 Ga0265330_10036984
287 Ga0265330_10052998
288 Ga0265328_10020025
289 Ga0265320_10000830
290 Ga0265320_10003956
291 Ga0265320_10006571
292 Ga0265320_10040053
293 Ga0265325_10021293
294 Ga0265329_10007820
295 Ga0265339_10002854
296 Ga0265339_10012036
297 Ga0265327_10003981
298 Ga0265327_10043625
299 Ga0265316_10000797
300 Ga0265316_10004023
301 Ga0265316_10019673
302 Ga0265316_10032814
303 Ga0265316_10042382
304 Ga0265316_10054182
305 Ga0265316_10057926
306 Ga0265316_10064123
307 Ga0307408_100050845
308 Ga0265313_10005323
309 Ga0265313_10011286
310 Ga0265313_10012076
311 Ga0265313_10076887
312 Ga0265314_10000142
313 Ga0265314_10014626
314 Ga0265314_10025946
315 Ga0265342_10005817
316 Ga0265342_10024647
317 Ga0265342_10036288
318 Ga0265342_10056255
319 Ga0307409_100010763
320 Ga0373930_0006453
321 Ga0373928_0000647
322 Ga0373929_0000104
323 Ga0373944_0003464
324 Ga0373949_0001479
325 Ga0373951_0006128
326 Ga0373932_0000001
327 Ga0373945_0017153
328 Ga0373954_0014426
329 Ga0373956_0049258
330 Ga0373962_0000005
331 Ga0373931_0000008
332 Ga0373927_0008328
333 Ga0373927_0023101
334 Ga0373927_0025715
335 Ga0373927_0092179
336 Ga0373933_0045365
337 Ga0373947_0010670
338 Ga0373937_0065694
339 Ga0373925_0000192
340 Ga0373925_0000775
341 Ga0373925_0067005
342 Ga0451577_0000115
343 Ga0451577_0000289
344 Ga0451577_0008552
345 Ga0451577_0125097
346 Ga0453684_0002080
347 Ga0453684_0002551
348 Ga0453684_0003259
349 Ga0453684_0032179
350 Ga0453684_0102938
351 Ga0451576_0031779
352 Ga0451576_0301573
353 Ga0451576_0339639
354 Ga0451576_0347066
355 Ga0495592_0000167
356 Ga0495592_0023136
357 Ga0495629_0046367
358 Ga0495662_0024257
359 Ga0495664_0009410
360 Ga0495664_0036747
361 Ga0495618_0001379
362 Ga0495628_0000574
363 Ga0495628_0125699
364 Ga0495630_0000076
365 Ga0495630_0006100
366 Ga0495630_0011661
367 Ga0495630_0067392
368 Ga0495666_0011694
369 Ga0495652_0136322
370 Ga0495640_0055100
371 Ga0495586_0000001
372 Ga0495586_0000173
373 Ga0495586_0003529
374 Ga0495586_0092480
375 Ga0495587_0093808
376 Ga0495645_0031527
377 Ga0495634_0002733
378 Ga0495634_0036328
379 Ga0495599_0003902
380 Ga0495599_0021218
381 Ga0495658_0003361
382 Ga0495658_0011716
383 Ga0495669_0050170
384 Ga0495613_0009597
385 Ga0495624_0030115
386 Ga0495674_0000207
387 Ga0495674_0004690
388 Ga0495674_0013269
389 Ga0495676_0016423
390 Ga0495680_0022287
391 Ga0496107_0029424
392 Ga0501031_0017059
393 Ga0501032_0007180
394 Ga0501033_0017339
395 Ga0501033_0146407
396 Ga0501037_0036447
397 Ga0501037_0066186
398 Ga0501043_0139575
399 Ga0501083_0001162
400 Ga0501083_0003264
401 Ga0501035_0020057
402 Ga0501035_0069767
403 Ga0501044_0007157
404 Ga0501044_0030824
405 Ga0501044_0175451
406 Ga0501082_0300434

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

242

409

0.99

PF00072

Response_reg

Response regulator receiver domain

107

219

0.98

PF02954

HTH_8

Bacterial regulatory protein, Fis family

500

541

0.97

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

243

413

0.91

PF07728

AAA_5

AAA domain (dynein-related subfamily)

265

400

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6luf-assembly4.cif.gz_D trans-acting mutant y290a of the central aaa+ domain of the flagellar regulatory protein flrc 0.9702 144 382
6lua-assembly1.cif.gz_G cis-mutant r349a of the central aaa+ domain of the flagellar regulatory protein flrc 0.9698 144 382
3hdv-assembly1.cif.gz_C crystal structure of response regulator receiver protein from pseudomonas putida 0.9661 10 122
7w9h-assembly1.cif.gz_A crystal structure of the receiver domain of the transcription regulator fler from pseudomonas aeruginosa 0.9628 9 123
6ifh-assembly1.cif.gz_A unphosphorylated spo0f from paenisporosarcina sp. tg-14 0.9624 9 125
ID Description Score Start End Superfamily
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9843 144 312 3.40.50.300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9701 10 88 3.40.50.2300
af_P14375_1_129_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9696 10 125 3.40.50.2300
1ojlB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.968 144 313 3.40.50.300
af_P07604_193_369_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9675 143 314 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A0P9HB75-F1-model_v4 Response regulatory domain-containing protein 0.9705 10 125 GO:0000160
AF-A0A2A5G3C3-F1-model_v4 Two-component system response regulator 0.9704 9 124 GO:0000160
AF-A0A3D0QHP9-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9696 9 125 GO:0000155
AF-A0A426H4U4-F1-model_v4 deleted 0.9688 9 125
AF-A0A1N7MT93-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9681 11 126 GO:0000155

Map