F311383

General Info

Members Datasets Scaffolds Average Seq Length
203 131 404 477

Family's Representative Sequence

Representative Sequence 3300031238|Ga0265332_10057435|Ga0265332_100574351
Length 504
Sequence MVIRNPIPDRPRPMKTNTNNTRPRELTRRAFAGKTLIAAGMLAGAPAFLRGQNLNNKLNIAFIAAGGRANASLSELTLTPGRSERAVADGTAAAHPDENVAVLCDVNQAVLDSAAQRYPKAKRFNDLRRVFDSPNDFDAVVVSTAEHTHAFATYLALIHGKHVYCEKPLAHNVWETRLIRETAAKYPKLSTQMGNQGHASPTRRTIQEILMTGGIGPVREVHVWADRAWGLQDTASAEKFDRPHGFYNGIQIVDRFKEEMPIPPTLHFDLWLGPAPARPFHATYFPGPRWYRWWDFGNGTMSDLGSHDNDVPYTVLDLKRPDGKGGSVLAPLRIESISPNVPVAHRELAPATLTATFDYAAVGSQPALKLIWHQGDSKPPGWVPAWGGRSCLFIGDKGMLLGNGKLLPEERFKDFQKPAETLPRSPGHWVEWVNYAKGQGPVPGSNFQYSGWTTEANHLGNVAYRTGKKIEWDYVNLRATNAPEAAPFIKRPEYRKGWDDILKA

Samples

Sample ID Description Type Environment
1 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
97 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
102 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
121 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
127 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
128 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
129 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
130 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
131 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.51
Metatranscriptomes 0.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.48
Nodule 0
Rhizoplane 5.91
Rhizosphere 92.61
Stem 0
Stem Tuber 0
Unclassified 0.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265332_10057435 3300031238 Bacteria 1667
2 Ga0065712_10068320 3300005290 Bacteria 11726
3 Ga0065712_10072428 3300005290 Bacteria 4757
4 Ga0065715_10013070 3300005293 Bacteria 2771
5 Ga0065715_10109495 3300005293 Bacteria 2637
6 Ga0070683_100007367 3300005329 Bacteria 9296
7 Ga0070670_100002435 3300005331 Bacteria 15345
8 Ga0070670_100004762 3300005331 Bacteria 11396
9 Ga0070689_100008489 3300005340 Bacteria 7238
10 Ga0070689_100103782 3300005340 Bacteria 2253
11 Ga0070661_100009514 3300005344 Bacteria 6733
12 Ga0070669_100002031 3300005353 Bacteria 14639
13 Ga0070669_100079870 3300005353 Bacteria 2433
14 Ga0070675_100039449 3300005354 Bacteria 3854
15 Ga0070671_100022345 3300005355 Bacteria 5165
16 Ga0070674_100088298 3300005356 Bacteria 2231
17 Ga0070713_100182743 3300005436 Bacteria 1885
18 Ga0070694_100008601 3300005444 Bacteria 6251
19 Ga0070708_100140721 3300005445 Bacteria 2237
20 Ga0070663_100021653 3300005455 Bacteria 4280
21 Ga0070678_100134910 3300005456 Bacteria 1967
22 Ga0070681_10128751 3300005458 Bacteria 2464
23 Ga0070706_100262573 3300005467 Bacteria 1612
24 Ga0070707_100034954 3300005468 Bacteria 4792
25 Ga0070698_100157121 3300005471 Bacteria 2219
26 Ga0070684_100003781 3300005535 Bacteria 11429
27 Ga0068853_100000038 3300005539 Bacteria 107719
28 Ga0070672_100077136 3300005543 Bacteria 2664
29 Ga0070695_100009499 3300005545 Bacteria 5793
30 Ga0070693_100074975 3300005547 Bacteria 2002
31 Ga0070704_100003606 3300005549 Bacteria 8893
32 Ga0070664_100001440 3300005564 Bacteria 18973
33 Ga0070664_100034102 3300005564 Bacteria 4269
34 Ga0068857_100059651 3300005577 Bacteria 3389
35 Ga0068863_100009501 3300005841 Bacteria 9485
36 Ga0068863_100120892 3300005841 Bacteria 2497
37 Ga0068860_100070799 3300005843 Bacteria 3316
38 Ga0081455_10002104 3300005937 Bacteria 23732
39 Ga0081455_10042469 3300005937 Bacteria 3988
40 Ga0081455_10066100 3300005937 Bacteria 3021
41 Ga0075364_10007925 3300006051 Bacteria 6326
42 Ga0075366_10024415 3300006195 Bacteria 3527
43 Ga0075428_100002345 3300006844 Bacteria 20548
44 Ga0075428_100003914 3300006844 Bacteria 16364
45 Ga0075428_100216246 3300006844 Bacteria 2070
46 Ga0075430_100000512 3300006846 Bacteria 29095
47 Ga0075430_100004600 3300006846 Bacteria 11615
48 Ga0075430_100014475 3300006846 Bacteria 6720
49 Ga0075430_100030650 3300006846 Bacteria 4568
50 Ga0075431_100126617 3300006847 Bacteria 2636
51 Ga0075431_100255489 3300006847 Bacteria 1779
52 Ga0075433_10008567 3300006852 Bacteria 8160
53 Ga0075433_10108615 3300006852 Bacteria 2461
54 Ga0075433_10166992 3300006852 Bacteria 1959
55 Ga0075434_100001048 3300006871 Bacteria 22547
56 Ga0075434_100070282 3300006871 Bacteria 3491
57 Ga0075434_100098096 3300006871 Bacteria 2935
58 Ga0075435_100007545 3300007076 Bacteria 7766
59 Ga0105240_10008245 3300009093 Bacteria 14925
60 Ga0111539_10009433 3300009094 Bacteria 12315
61 Ga0111539_10024756 3300009094 Bacteria 7362
62 Ga0111539_10067839 3300009094 Bacteria 4212
63 Ga0114129_10000624 3300009147 Bacteria 43996
64 Ga0114129_10010853 3300009147 Bacteria 12977
65 Ga0114129_10013477 3300009147 Bacteria 11648
66 Ga0114129_10029678 3300009147 Bacteria 7743
67 Ga0114129_10035509 3300009147 Bacteria 7041
68 Ga0114129_10081185 3300009147 Bacteria 4507
69 Ga0114129_10179654 3300009147 Bacteria 2881
70 Ga0114129_10267195 3300009147 Bacteria 2290
71 Ga0105248_10007475 3300009177 Bacteria 11986
72 Ga0105249_10005555 3300009553 Bacteria 10900
73 Ga0157369_10140513 3300013105 Bacteria 2555
74 Ga0157369_10174407 3300013105 Bacteria 2264
75 Ga0157374_10157252 3300013296 Bacteria 2213
76 Ga0163162_10050573 3300013306 Bacteria 4167
77 Ga0157375_10048590 3300013308 Bacteria 4151
78 Ga0157375_10150963 3300013308 Bacteria 2459
79 Ga0163163_10000020 3300014325 Bacteria 196885
80 Ga0157379_10037124 3300014968 Bacteria 4344
81 Ga0206356_10974437 3300020070 Bacteria 1481
82 Ga0207649_10114621 3300025920 Bacteria 1807
83 Ga0207646_10000209 3300025922 Bacteria 80063
84 Ga0207681_10072516 3300025923 Bacteria 2405
85 Ga0207650_10017251 3300025925 Bacteria 5053
86 Ga0207659_10181465 3300025926 Bacteria 1668
87 Ga0207700_10225903 3300025928 Bacteria 1589
88 Ga0207644_10008743 3300025931 Bacteria 6630
89 Ga0207690_10087092 3300025932 Bacteria 2197
90 Ga0207670_10005632 3300025936 Bacteria 6888
91 Ga0207691_10016750 3300025940 Bacteria 6957
92 Ga0207691_10066733 3300025940 Bacteria 3254
93 Ga0207711_10142506 3300025941 Bacteria 2157
94 Ga0207711_10178559 3300025941 Bacteria 1929
95 Ga0207661_10033176 3300025944 Bacteria 4006
96 Ga0207679_10011087 3300025945 Bacteria 5819
97 Ga0207679_10099052 3300025945 Bacteria 2275
98 Ga0207703_10018940 3300026035 Bacteria 5377
99 Ga0207639_10000061 3300026041 Bacteria 107734
100 Ga0207678_10036234 3300026067 Bacteria 4294
101 Ga0207641_10029667 3300026088 Bacteria 4524
102 Ga0207641_10030116 3300026088 Bacteria 4494
103 Ga0207674_10028167 3300026116 Bacteria 5934
104 Ga0207674_10050850 3300026116 Bacteria 4232
105 Ga0207683_10173379 3300026121 Bacteria 1954
106 Ga0207428_10099613 3300027907 Bacteria 2247
107 Ga0268265_10004265 3300028380 Bacteria 9985
108 Ga0268265_10208880 3300028380 Bacteria 1700
109 Ga0268264_10171106 3300028381 Bacteria 1965
110 Ga0265337_1013441 3300028556 Bacteria 2746
111 Ga0265338_10005833 3300028800 Bacteria 15895
112 Ga0265328_10004733 3300031239 Bacteria 5883
113 Ga0265325_10000070 3300031241 Bacteria 71030
114 Ga0265339_10004864 3300031249 Bacteria 9070
115 Ga0265331_10000623 3300031250 Bacteria 30818
116 Ga0265316_10058863 3300031344 Bacteria 2991
117 Ga0307408_100013684 3300031548 Bacteria 5388
118 Ga0307408_100018182 3300031548 Unclassified 4717
119 Ga0265313_10000077 3300031595 Bacteria 96430
120 Ga0265314_10000020 3300031711 Bacteria 307052
121 Ga0265314_10000084 3300031711 Bacteria 143039
122 Ga0265342_10004460 3300031712 Bacteria 11013
123 Ga0307409_100054872 3300031995 Unclassified 3072
124 Ga0307416_100149841 3300032002 Bacteria 2137
125 Ga0373947_0005066 3300035725 Bacteria 7718
126 Ga0373925_0002521 3300037068 Bacteria 14618
127 Ga0395905_0101492 3300037471 Bacteria 2701
128 Ga0439435_0003635 3300042436 Bacteria 3231
129 Ga0451577_0130965 3300042876 Bacteria 2250
130 Ga0453684_0063016 3300044712 Bacteria 4745
131 Ga0451576_0186080 3300045051 Bacteria 2168
132 Ga0451576_0190023 3300045051 Bacteria 2145
133 Ga0495638_0007535 3300046460 Bacteria 7790
134 Ga0495638_0012956 3300046460 Bacteria 5693
135 Ga0495630_0009071 3300046517 Bacteria 7148
136 Ga0495666_0006744 3300046526 Bacteria 5775
137 Ga0495656_0024659 3300046615 Bacteria 2378
138 Ga0496100_0108270 3300048903 Bacteria 1927
139 Ga0496102_0148362 3300048905 Bacteria 2202
140 Ga0496104_0010451 3300048907 Bacteria 8289
141 Ga0496105_0124272 3300048908 Bacteria 2127
142 Ga0496106_0045383 3300048909 Bacteria 3301
143 Ga0496108_0011251 3300048911 Bacteria 7269
144 Ga0496109_0002494 3300048912 Bacteria 15427
145 Ga0496109_0112842 3300048912 Bacteria 2527
146 Ga0496110_0007827 3300048913 Bacteria 8563
147 Ga0496110_0032423 3300048913 Bacteria 4512
148 Ga0496111_0100332 3300048914 Bacteria 2126
149 Ga0496112_0033240 3300048915 Bacteria 5012
150 Ga0501034_0101520 3300049571 Bacteria 2870
151 Ga0501038_0149082 3300049574 Bacteria 1908
152 Ga0501040_0092384 3300049576 Bacteria 2104
153 Ga0501046_0083739 3300049580 Bacteria 2461
154 Ga0501071_0040399 3300049587 Bacteria 3338
155 Ga0501072_0065706 3300049588 Bacteria 2861
156 Ga0501073_0027730 3300049589 Bacteria 4048
157 Ga0501075_0136176 3300049591 Bacteria 1871
158 Ga0501076_0015356 3300049592 Bacteria 5787
159 Ga0501077_0003634 3300049593 Bacteria 9280
160 Ga0501077_0038073 3300049593 Bacteria 3062
161 Ga0501035_0186955 3300049822 Bacteria 1783
162 nmdc:mga05p37_107909_c1 3300050507 Bacteria 3425
163 nmdc:mga05p37_12845_c1 3300050507 Bacteria 4083
164 nmdc:mga05p37_136245_c1 3300050507 Bacteria 3011
165 nmdc:mga05p37_23257_c1 3300050507 Bacteria 7517
166 nmdc:mga05p37_2422_c1 3300050507 Bacteria 21695
167 nmdc:mga05p37_2659_c1 3300050507 Bacteria 20814
168 nmdc:mga05p37_42852_c1 3300050507 Bacteria 5564
169 nmdc:mga05p37_434217_c1 3300050507 Bacteria 1525
170 nmdc:mga05p37_50176_c1 3300050507 Bacteria 5131
171 nmdc:mga09592_56826_c1 3300050508 Bacteria 3307
172 nmdc:mga09592_7691_c1 3300050508 Bacteria 8757
173 nmdc:mga09592_97189_c1 3300050508 Bacteria 2520
174 nmdc:mga0qj67_10150_c1 3300050509 Bacteria 7030
175 nmdc:mga0qj67_28903_c1 3300050509 Bacteria 4303
176 nmdc:mga0qj67_57629_c1 3300050509 Bacteria 3080
177 nmdc:mga06r32_139596_c1 3300050510 Bacteria 2399
178 nmdc:mga06r32_20298_c1 3300050510 Bacteria 6115
179 nmdc:mga06r32_63548_c1 3300050510 Bacteria 3559
180 nmdc:mga06r32_72721_c1 3300050510 Bacteria 3329
181 nmdc:mga08y16_15215_c1 3300050511 Bacteria 8092
182 nmdc:mga08y16_38330_c1 3300050511 Bacteria 5034
183 nmdc:mga08y16_41370_c1 3300050511 Bacteria 4828
184 nmdc:mga08y16_6592_c1 3300050511 Bacteria 12179
185 nmdc:mga0n895_200443_c1 3300050512 Bacteria 2027
186 nmdc:mga0n895_3247_c1 3300050512 Bacteria 13033
187 nmdc:mga0n895_49703_c1 3300050512 Bacteria 4110
188 nmdc:mga0rr50_18319_c1 3300050513 Bacteria 4700
189 nmdc:mga0a205_35631_c1 3300050515 Bacteria 4778
190 nmdc:mga0a205_40694_c1 3300050515 Bacteria 4474
191 nmdc:mga0a205_69194_c1 3300050515 Bacteria 3409
192 nmdc:mga0a205_97095_c1 3300050515 Bacteria 2846
193 Ga0500568_0002106 3300053139 Bacteria 12021
194 Ga0590071_000196 3300059421 Bacteria 17680
195 Ga0590071_002134 3300059421 Bacteria 5036
196 Ga0590075_001777 3300059424 Bacteria 5279
197 Ga0590075_005098 3300059424 Bacteria 3106
198 Ga0590075_010061 3300059424 Bacteria 2273
199 Ga0590077_000762 3300059426 Bacteria 8425
200 Ga0590077_001558 3300059426 Bacteria 5291
201 Ga0501082_0015530 3300060353 Bacteria 6556
202 Ga0501082_0155785 3300060353 Bacteria 1985
203 Ga0265332_10057435
204 Ga0065712_10068320
205 Ga0065712_10072428
206 Ga0065715_10013070
207 Ga0065715_10109495
208 Ga0070683_100007367
209 Ga0070670_100002435
210 Ga0070670_100004762
211 Ga0070689_100008489
212 Ga0070689_100103782
213 Ga0070661_100009514
214 Ga0070669_100002031
215 Ga0070669_100079870
216 Ga0070675_100039449
217 Ga0070671_100022345
218 Ga0070674_100088298
219 Ga0070713_100182743
220 Ga0070694_100008601
221 Ga0070708_100140721
222 Ga0070663_100021653
223 Ga0070678_100134910
224 Ga0070681_10128751
225 Ga0070706_100262573
226 Ga0070707_100034954
227 Ga0070698_100157121
228 Ga0070684_100003781
229 Ga0068853_100000038
230 Ga0070672_100077136
231 Ga0070695_100009499
232 Ga0070693_100074975
233 Ga0070704_100003606
234 Ga0070664_100001440
235 Ga0070664_100034102
236 Ga0068857_100059651
237 Ga0068863_100009501
238 Ga0068863_100120892
239 Ga0068860_100070799
240 Ga0081455_10002104
241 Ga0081455_10042469
242 Ga0081455_10066100
243 Ga0075364_10007925
244 Ga0075366_10024415
245 Ga0075428_100002345
246 Ga0075428_100003914
247 Ga0075428_100216246
248 Ga0075430_100000512
249 Ga0075430_100004600
250 Ga0075430_100014475
251 Ga0075430_100030650
252 Ga0075431_100126617
253 Ga0075431_100255489
254 Ga0075433_10008567
255 Ga0075433_10108615
256 Ga0075433_10166992
257 Ga0075434_100001048
258 Ga0075434_100070282
259 Ga0075434_100098096
260 Ga0075435_100007545
261 Ga0105240_10008245
262 Ga0111539_10009433
263 Ga0111539_10024756
264 Ga0111539_10067839
265 Ga0114129_10000624
266 Ga0114129_10010853
267 Ga0114129_10013477
268 Ga0114129_10029678
269 Ga0114129_10035509
270 Ga0114129_10081185
271 Ga0114129_10179654
272 Ga0114129_10267195
273 Ga0105248_10007475
274 Ga0105249_10005555
275 Ga0157369_10140513
276 Ga0157369_10174407
277 Ga0157374_10157252
278 Ga0163162_10050573
279 Ga0157375_10048590
280 Ga0157375_10150963
281 Ga0163163_10000020
282 Ga0157379_10037124
283 Ga0206356_10974437
284 Ga0207649_10114621
285 Ga0207646_10000209
286 Ga0207681_10072516
287 Ga0207650_10017251
288 Ga0207659_10181465
289 Ga0207700_10225903
290 Ga0207644_10008743
291 Ga0207690_10087092
292 Ga0207670_10005632
293 Ga0207691_10016750
294 Ga0207691_10066733
295 Ga0207711_10142506
296 Ga0207711_10178559
297 Ga0207661_10033176
298 Ga0207679_10011087
299 Ga0207679_10099052
300 Ga0207703_10018940
301 Ga0207639_10000061
302 Ga0207678_10036234
303 Ga0207641_10029667
304 Ga0207641_10030116
305 Ga0207674_10028167
306 Ga0207674_10050850
307 Ga0207683_10173379
308 Ga0207428_10099613
309 Ga0268265_10004265
310 Ga0268265_10208880
311 Ga0268264_10171106
312 Ga0265337_1013441
313 Ga0265338_10005833
314 Ga0265328_10004733
315 Ga0265325_10000070
316 Ga0265339_10004864
317 Ga0265331_10000623
318 Ga0265316_10058863
319 Ga0307408_100013684
320 Ga0307408_100018182
321 Ga0265313_10000077
322 Ga0265314_10000020
323 Ga0265314_10000084
324 Ga0265342_10004460
325 Ga0307409_100054872
326 Ga0307416_100149841
327 Ga0373947_0005066
328 Ga0373925_0002521
329 Ga0395905_0101492
330 Ga0439435_0003635
331 Ga0451577_0130965
332 Ga0453684_0063016
333 Ga0451576_0186080
334 Ga0451576_0190023
335 Ga0495638_0007535
336 Ga0495638_0012956
337 Ga0495630_0009071
338 Ga0495666_0006744
339 Ga0495656_0024659
340 Ga0496100_0108270
341 Ga0496102_0148362
342 Ga0496104_0010451
343 Ga0496105_0124272
344 Ga0496106_0045383
345 Ga0496108_0011251
346 Ga0496109_0002494
347 Ga0496109_0112842
348 Ga0496110_0007827
349 Ga0496110_0032423
350 Ga0496111_0100332
351 Ga0496112_0033240
352 Ga0501034_0101520
353 Ga0501038_0149082
354 Ga0501040_0092384
355 Ga0501046_0083739
356 Ga0501071_0040399
357 Ga0501072_0065706
358 Ga0501073_0027730
359 Ga0501075_0136176
360 Ga0501076_0015356
361 Ga0501077_0003634
362 Ga0501077_0038073
363 Ga0501035_0186955
364 nmdc:mga05p37_107909_c1
365 nmdc:mga05p37_12845_c1
366 nmdc:mga05p37_136245_c1
367 nmdc:mga05p37_23257_c1
368 nmdc:mga05p37_2422_c1
369 nmdc:mga05p37_2659_c1
370 nmdc:mga05p37_42852_c1
371 nmdc:mga05p37_434217_c1
372 nmdc:mga05p37_50176_c1
373 nmdc:mga09592_56826_c1
374 nmdc:mga09592_7691_c1
375 nmdc:mga09592_97189_c1
376 nmdc:mga0qj67_10150_c1
377 nmdc:mga0qj67_28903_c1
378 nmdc:mga0qj67_57629_c1
379 nmdc:mga06r32_139596_c1
380 nmdc:mga06r32_20298_c1
381 nmdc:mga06r32_63548_c1
382 nmdc:mga06r32_72721_c1
383 nmdc:mga08y16_15215_c1
384 nmdc:mga08y16_38330_c1
385 nmdc:mga08y16_41370_c1
386 nmdc:mga08y16_6592_c1
387 nmdc:mga0n895_200443_c1
388 nmdc:mga0n895_3247_c1
389 nmdc:mga0n895_49703_c1
390 nmdc:mga0rr50_18319_c1
391 nmdc:mga0a205_35631_c1
392 nmdc:mga0a205_40694_c1
393 nmdc:mga0a205_69194_c1
394 nmdc:mga0a205_97095_c1
395 Ga0500568_0002106
396 Ga0590071_000196
397 Ga0590071_002134
398 Ga0590075_001777
399 Ga0590075_005098
400 Ga0590075_010061
401 Ga0590077_000762
402 Ga0590077_001558
403 Ga0501082_0015530
404 Ga0501082_0155785

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

81

194

0.89

PF19051

GFO_IDH_MocA_C2

Oxidoreductase family, C-terminal alpha/beta domain

240

321

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.7676 45 451
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.759 45 451
3q2k-assembly1.cif.gz_F crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.7552 45 451
3q2k-assembly1.cif.gz_B crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.7488 45 451
3q2k-assembly1.cif.gz_F crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.747 45 451
ID Description Score Start End Superfamily
4n54A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9081 45 172 3.40.50.720
af_F1R9L8_3_129_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8997 45 172 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8738 45 165 3.40.50.720
af_F1R9L8_3_129_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.873 45 172 3.40.50.720
af_Q54KI6_15_151_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8728 45 165 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V8BE61-F1-model_v4 Oxidoreductase 0.8714 5 479 GO:0000166
AF-A0A2V8BE61-F1-model_v4 Oxidoreductase 0.8677 5 479 GO:0000166
AF-A0A7Z9H722-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.8623 39 167 GO:0000166
AF-A0A7W8DND1-F1-model_v4 Putative dehydrogenase 0.8595 32 482 GO:0000166
AF-A0A351FSL8-F1-model_v4 Dehydrogenase 0.8551 33 477 GO:0000166

Map