F311376

General Info

Members Datasets Scaffolds Average Seq Length
203 144 406 136

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_11165406|Ga0265338_111654061
Length 156
Sequence MPRSAASTRRTGSRPATVADLPLTGGCNCGGVRFEVVEPLESASWCHCTRCQRRTGSSASPQARTAPGALRILSGEELLRAWEPPDGFAKVFCSACGSSLWSRSPDGQTFSVRFGVLDRDPGIRPACHQFVAYAAPWDPLPDDGLPRYPERRPPDA

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
65 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
66 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
75 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
88 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
89 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
90 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
99 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
104 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
107 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
110 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
111 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
112 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.01
Metatranscriptomes 0.99
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.49
Nodule 0
Rhizoplane 9.36
Rhizosphere 88.18
Stem 0
Stem Tuber 0
Unclassified 11.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_11165406 3300028800 Unclassified 518
2 rootH1_10190175 3300003323 Bacteria 1857
3 Ga0070683_100044298 3300005329 Bacteria 4103
4 Ga0070683_101017548 3300005329 Bacteria 795
5 Ga0070670_100439632 3300005331 Bacteria 1155
6 Ga0070682_100016814 3300005337 Bacteria 4257
7 Ga0070709_10076383 3300005434 Bacteria 2175
8 Ga0070714_100005733 3300005435 Bacteria 9522
9 Ga0070714_100042321 3300005435 Bacteria 3848
10 Ga0070714_101805242 3300005435 Bacteria 597
11 Ga0070714_102117490 3300005435 Unclassified 548
12 Ga0070713_100029208 3300005436 Bacteria 4364
13 Ga0070713_101094848 3300005436 Unclassified 770
14 Ga0070710_10170134 3300005437 Bacteria 1357
15 Ga0070711_100002862 3300005439 Bacteria 9929
16 Ga0070708_100242235 3300005445 Bacteria 1693
17 Ga0070663_100451167 3300005455 Bacteria 1060
18 Ga0070681_10224785 3300005458 Bacteria 1792
19 Ga0070681_10521405 3300005458 Bacteria 1102
20 Ga0070681_10718920 3300005458 Bacteria 915
21 Ga0070707_101419217 3300005468 Bacteria 661
22 Ga0070707_102117657 3300005468 Unclassified 530
23 Ga0070698_100181562 3300005471 Bacteria 2043
24 Ga0070698_101089916 3300005471 Unclassified 747
25 Ga0070679_100694703 3300005530 Bacteria 960
26 Ga0070679_101216006 3300005530 Bacteria 699
27 Ga0070684_100115409 3300005535 Bacteria 2411
28 Ga0070684_101816898 3300005535 Bacteria 575
29 Ga0068853_101721364 3300005539 Bacteria 608
30 Ga0070695_100637510 3300005545 Bacteria 840
31 Ga0068855_100136337 3300005563 Bacteria 2800
32 Ga0068855_100494053 3300005563 Bacteria 1331
33 Ga0070664_100475476 3300005564 Bacteria 1149
34 Ga0068857_101161629 3300005577 Bacteria 747
35 Ga0068854_100875657 3300005578 Bacteria 788
36 Ga0068864_101793820 3300005618 Bacteria 619
37 Ga0081455_10138391 3300005937 Bacteria 1894
38 Ga0070717_10026347 3300006028 Bacteria 4636
39 Ga0070717_10038644 3300006028 Bacteria 3880
40 Ga0075364_10184487 3300006051 Bacteria 1412
41 Ga0070712_100013901 3300006175 Bacteria 5155
42 Ga0070712_100118551 3300006175 Bacteria 1988
43 Ga0075435_100062192 3300007076 Bacteria 3029
44 Ga0105240_10411812 3300009093 Bacteria 1520
45 Ga0111539_12308543 3300009094 Unclassified 624
46 Ga0105243_10441066 3300009148 Bacteria 1219
47 Ga0105237_10107725 3300009545 Bacteria 2778
48 Ga0105238_10054419 3300009551 Bacteria 4018
49 Ga0105239_10686541 3300010375 Bacteria 1170
50 Ga0105239_10703944 3300010375 Bacteria 1155
51 Ga0105246_10844023 3300011119 Bacteria 816
52 Ga0157373_10105500 3300013100 Bacteria 1982
53 Ga0157370_10013653 3300013104 Bacteria 8354
54 Ga0157370_10680960 3300013104 Bacteria 939
55 Ga0157369_10078399 3300013105 Bacteria 3539
56 Ga0157374_10501218 3300013296 Bacteria 1219
57 Ga0157372_10228935 3300013307 Bacteria 2155
58 Ga0157372_10319548 3300013307 Bacteria 1808
59 Ga0163163_10788166 3300014325 Bacteria 1014
60 Ga0157377_11602885 3300014745 Bacteria 521
61 Ga0197907_11058314 3300020069 Bacteria 1384
62 Ga0206356_10698405 3300020070 Bacteria 659
63 Ga0207692_10203849 3300025898 Bacteria 1164
64 Ga0207699_10327221 3300025906 Bacteria 1077
65 Ga0207707_10087228 3300025912 Bacteria 2727
66 Ga0207707_10235346 3300025912 Bacteria 1593
67 Ga0207707_10740887 3300025912 Bacteria 822
68 Ga0207695_10526230 3300025913 Bacteria 1064
69 Ga0207671_10364075 3300025914 Bacteria 1148
70 Ga0207693_10010238 3300025915 Bacteria 7613
71 Ga0207693_10288984 3300025915 Bacteria 1285
72 Ga0207694_10401818 3300025924 Bacteria 1139
73 Ga0207650_10336125 3300025925 Bacteria 1240
74 Ga0207700_10523057 3300025928 Bacteria 1051
75 Ga0207700_10576793 3300025928 Unclassified 1000
76 Ga0207664_10053504 3300025929 Bacteria 3196
77 Ga0207664_10242070 3300025929 Bacteria 1571
78 Ga0207664_11410252 3300025929 Bacteria 617
79 Ga0207709_10253192 3300025935 Bacteria 1287
80 Ga0207661_10026470 3300025944 Bacteria 4420
81 Ga0207661_10083054 3300025944 Bacteria 2650
82 Ga0207679_10086955 3300025945 Bacteria 2405
83 Ga0207667_10303637 3300025949 Bacteria 1631
84 Ga0207667_10403163 3300025949 Bacteria 1392
85 Ga0207640_10773919 3300025981 Bacteria 829
86 Ga0207676_10873233 3300026095 Bacteria 881
87 Ga0207674_10122537 3300026116 Bacteria 2566
88 Ga0207683_11759690 3300026121 Bacteria 569
89 Ga0265319_1017296 3300028563 Bacteria 2743
90 Ga0265334_10144916 3300028573 Bacteria 840
91 Ga0265318_10004811 3300028577 Bacteria 6464
92 Ga0265338_10033312 3300028800 Bacteria 5002
93 Ga0265338_10138297 3300028800 Bacteria 1911
94 Ga0265320_10008476 3300031240 Bacteria 6290
95 Ga0265340_10022213 3300031247 Bacteria 3246
96 Ga0265331_10053564 3300031250 Bacteria 1924
97 Ga0265327_10067611 3300031251 Bacteria 1799
98 Ga0265327_10165504 3300031251 Bacteria 1019
99 Ga0265316_10039745 3300031344 Bacteria 3776
100 Ga0265314_10055591 3300031711 Bacteria 2730
101 Ga0265314_10152561 3300031711 Bacteria 1415
102 Ga0265342_10089615 3300031712 Bacteria 1765
103 Ga0373944_0005298 3300035089 Bacteria 3393
104 Ga0373945_0270134 3300035116 Bacteria 722
105 Ga0373954_0616898 3300035118 Unclassified 538
106 Ga0373943_0113257 3300035170 Bacteria 1433
107 Ga0373935_0234960 3300035692 Bacteria 1278
108 Ga0373927_0119477 3300035695 Bacteria 1720
109 Ga0373947_0013786 3300035725 Bacteria 4633
110 Ga0373947_0650505 3300035725 Bacteria 719
111 Ga0373937_2084830 3300036401 Bacteria 513
112 Ga0373925_0594738 3300037068 Bacteria 911
113 Ga0373925_1174898 3300037068 Unclassified 631
114 Ga0395900_1125342 3300037418 Bacteria 702
115 Ga0395898_0200191 3300037466 Bacteria 1907
116 Ga0395898_1118358 3300037466 Unclassified 721
117 Ga0395898_1371046 3300037466 Bacteria 635
118 Ga0395901_0109417 3300038443 Bacteria 2901
119 Ga0395901_1425011 3300038443 Bacteria 650
120 Ga0395901_1619255 3300038443 Unclassified 600
121 Ga0436365_0693848 3300039437 Bacteria 1398
122 Ga0451793_0633195 3300041452 Bacteria 619
123 Ga0451793_0979246 3300041452 Bacteria 1709
124 Ga0451800_0745060 3300041459 Unclassified 939
125 Ga0451853_2360374 3300041512 Unclassified 1186
126 Ga0439434_0028719 3300042435 Bacteria 1685
127 Ga0466961_0503781 3300044693 Bacteria 731
128 Ga0466963_0014358 3300044694 Bacteria 4883
129 Ga0466963_0317149 3300044694 Bacteria 1097
130 Ga0466963_0370900 3300044694 Bacteria 1008
131 Ga0466963_0461965 3300044694 Bacteria 896
132 Ga0466963_0916870 3300044694 Bacteria 617
133 Ga0466968_0089272 3300044735 Bacteria 1364
134 Ga0466957_0407261 3300044842 Unclassified 931
135 Ga0466957_0788080 3300044842 Bacteria 675
136 Ga0466967_0008428 3300045976 Bacteria 7552
137 Ga0466967_0127309 3300045976 Archaea 2360
138 Ga0466967_0194440 3300045976 Bacteria 1919
139 Ga0466967_0381796 3300045976 Bacteria 1368
140 Ga0466967_1879604 3300045976 Bacteria 596
141 Ga0495592_0417875 3300046454 Bacteria 846
142 Ga0495603_0052654 3300046455 Bacteria 2416
143 Ga0495641_0043972 3300046461 Bacteria 2064
144 Ga0495582_0170502 3300046473 Bacteria 1239
145 Ga0495582_0499084 3300046473 Bacteria 703
146 Ga0495630_0026876 3300046517 Bacteria 4264
147 Ga0495630_1152239 3300046517 Unclassified 587
148 Ga0495587_0747262 3300046536 Unclassified 535
149 Ga0495622_0233459 3300046557 Bacteria 812
150 Ga0495634_0776654 3300046642 Unclassified 547
151 Ga0495658_0045531 3300046683 Bacteria 2462
152 Ga0495658_0211466 3300046683 Bacteria 1212
153 Ga0495613_0069442 3300046689 Bacteria 2568
154 Ga0495624_0558434 3300046690 Bacteria 683
155 Ga0495581_0673271 3300047315 Unclassified 597
156 Ga0495604_0830491 3300047317 Bacteria 581
157 Ga0495676_0027643 3300047321 Bacteria 4861
158 Ga0495676_0609833 3300047321 Bacteria 710
159 Ga0495686_0217905 3300047472 Bacteria 1087
160 Ga0495614_0291144 3300048089 Bacteria 753
161 Ga0496101_0813741 3300048904 Unclassified 737
162 Ga0496102_0045705 3300048905 Bacteria 3976
163 Ga0496104_0009993 3300048907 Bacteria 8472
164 Ga0496104_0183179 3300048907 Bacteria 2005
165 Ga0496105_0070697 3300048908 Unclassified 2885
166 Ga0496108_0499747 3300048911 Bacteria 1062
167 Ga0496109_0526960 3300048912 Bacteria 1115
168 Ga0496109_0828799 3300048912 Bacteria 863
169 Ga0496109_1656178 3300048912 Bacteria 574
170 Ga0496111_0797671 3300048914 Bacteria 684
171 Ga0496112_1029489 3300048915 Bacteria 743
172 Ga0496113_0368557 3300048916 Bacteria 1153
173 Ga0496113_0949302 3300048916 Unclassified 679
174 Ga0496114_0125119 3300048917 Bacteria 2215
175 Ga0496114_0147211 3300048917 Bacteria 2042
176 Ga0496115_0016227 3300048918 Bacteria 5667
177 Ga0496121_0001400 3300048924 Bacteria 40824
178 Ga0501041_0135710 3300049577 Bacteria 1533
179 Ga0501042_0157757 3300049578 Bacteria 1637
180 Ga0501046_0491780 3300049580 Bacteria 879
181 Ga0501047_0258514 3300049581 Bacteria 1589
182 Ga0501067_0788187 3300049583 Unclassified 535
183 Ga0501069_0120256 3300049585 Bacteria 1500
184 Ga0501072_0204685 3300049588 Bacteria 1573
185 Ga0501073_0047065 3300049589 Bacteria 3032
186 Ga0501074_0025908 3300049590 Bacteria 4254
187 Ga0501074_0784237 3300049590 Bacteria 672
188 Ga0501076_0816410 3300049592 Unclassified 769
189 Ga0501079_0020266 3300049741 Bacteria 5082
190 Ga0501080_0315693 3300049742 Bacteria 1416
191 Ga0501080_0923592 3300049742 Bacteria 760
192 Ga0501081_0302558 3300049743 Bacteria 1173
193 Ga0501081_1488477 3300049743 Bacteria 514
194 Ga0501083_0007574 3300049744 Bacteria 7693
195 Ga0501045_0762081 3300049824 Bacteria 713
196 nmdc:mga0n895_1824206_c1 3300050512 Bacteria 568
197 nmdc:mga0n895_895104_c1 3300050512 Bacteria 873
198 nmdc:mga08x19_1135994_c1 3300050514 Bacteria 554
199 Ga0495601_0003420 3300053077 Bacteria 9098
200 Ga0495619_0084780 3300053085 Bacteria 2139
201 Ga0495619_0289427 3300053085 Bacteria 1135
202 Ga0501082_0063171 3300060353 Bacteria 3188
203 Ga0530510_1134309 3300061734 Bacteria 599
204 Ga0265338_11165406
205 rootH1_10190175
206 Ga0070683_100044298
207 Ga0070683_101017548
208 Ga0070670_100439632
209 Ga0070682_100016814
210 Ga0070709_10076383
211 Ga0070714_100005733
212 Ga0070714_100042321
213 Ga0070714_101805242
214 Ga0070714_102117490
215 Ga0070713_100029208
216 Ga0070713_101094848
217 Ga0070710_10170134
218 Ga0070711_100002862
219 Ga0070708_100242235
220 Ga0070663_100451167
221 Ga0070681_10224785
222 Ga0070681_10521405
223 Ga0070681_10718920
224 Ga0070707_101419217
225 Ga0070707_102117657
226 Ga0070698_100181562
227 Ga0070698_101089916
228 Ga0070679_100694703
229 Ga0070679_101216006
230 Ga0070684_100115409
231 Ga0070684_101816898
232 Ga0068853_101721364
233 Ga0070695_100637510
234 Ga0068855_100136337
235 Ga0068855_100494053
236 Ga0070664_100475476
237 Ga0068857_101161629
238 Ga0068854_100875657
239 Ga0068864_101793820
240 Ga0081455_10138391
241 Ga0070717_10026347
242 Ga0070717_10038644
243 Ga0075364_10184487
244 Ga0070712_100013901
245 Ga0070712_100118551
246 Ga0075435_100062192
247 Ga0105240_10411812
248 Ga0111539_12308543
249 Ga0105243_10441066
250 Ga0105237_10107725
251 Ga0105238_10054419
252 Ga0105239_10686541
253 Ga0105239_10703944
254 Ga0105246_10844023
255 Ga0157373_10105500
256 Ga0157370_10013653
257 Ga0157370_10680960
258 Ga0157369_10078399
259 Ga0157374_10501218
260 Ga0157372_10228935
261 Ga0157372_10319548
262 Ga0163163_10788166
263 Ga0157377_11602885
264 Ga0197907_11058314
265 Ga0206356_10698405
266 Ga0207692_10203849
267 Ga0207699_10327221
268 Ga0207707_10087228
269 Ga0207707_10235346
270 Ga0207707_10740887
271 Ga0207695_10526230
272 Ga0207671_10364075
273 Ga0207693_10010238
274 Ga0207693_10288984
275 Ga0207694_10401818
276 Ga0207650_10336125
277 Ga0207700_10523057
278 Ga0207700_10576793
279 Ga0207664_10053504
280 Ga0207664_10242070
281 Ga0207664_11410252
282 Ga0207709_10253192
283 Ga0207661_10026470
284 Ga0207661_10083054
285 Ga0207679_10086955
286 Ga0207667_10303637
287 Ga0207667_10403163
288 Ga0207640_10773919
289 Ga0207676_10873233
290 Ga0207674_10122537
291 Ga0207683_11759690
292 Ga0265319_1017296
293 Ga0265334_10144916
294 Ga0265318_10004811
295 Ga0265338_10033312
296 Ga0265338_10138297
297 Ga0265320_10008476
298 Ga0265340_10022213
299 Ga0265331_10053564
300 Ga0265327_10067611
301 Ga0265327_10165504
302 Ga0265316_10039745
303 Ga0265314_10055591
304 Ga0265314_10152561
305 Ga0265342_10089615
306 Ga0373944_0005298
307 Ga0373945_0270134
308 Ga0373954_0616898
309 Ga0373943_0113257
310 Ga0373935_0234960
311 Ga0373927_0119477
312 Ga0373947_0013786
313 Ga0373947_0650505
314 Ga0373937_2084830
315 Ga0373925_0594738
316 Ga0373925_1174898
317 Ga0395900_1125342
318 Ga0395898_0200191
319 Ga0395898_1118358
320 Ga0395898_1371046
321 Ga0395901_0109417
322 Ga0395901_1425011
323 Ga0395901_1619255
324 Ga0436365_0693848
325 Ga0451793_0633195
326 Ga0451793_0979246
327 Ga0451800_0745060
328 Ga0451853_2360374
329 Ga0439434_0028719
330 Ga0466961_0503781
331 Ga0466963_0014358
332 Ga0466963_0317149
333 Ga0466963_0370900
334 Ga0466963_0461965
335 Ga0466963_0916870
336 Ga0466968_0089272
337 Ga0466957_0407261
338 Ga0466957_0788080
339 Ga0466967_0008428
340 Ga0466967_0127309
341 Ga0466967_0194440
342 Ga0466967_0381796
343 Ga0466967_1879604
344 Ga0495592_0417875
345 Ga0495603_0052654
346 Ga0495641_0043972
347 Ga0495582_0170502
348 Ga0495582_0499084
349 Ga0495630_0026876
350 Ga0495630_1152239
351 Ga0495587_0747262
352 Ga0495622_0233459
353 Ga0495634_0776654
354 Ga0495658_0045531
355 Ga0495658_0211466
356 Ga0495613_0069442
357 Ga0495624_0558434
358 Ga0495581_0673271
359 Ga0495604_0830491
360 Ga0495676_0027643
361 Ga0495676_0609833
362 Ga0495686_0217905
363 Ga0495614_0291144
364 Ga0496101_0813741
365 Ga0496102_0045705
366 Ga0496104_0009993
367 Ga0496104_0183179
368 Ga0496105_0070697
369 Ga0496108_0499747
370 Ga0496109_0526960
371 Ga0496109_0828799
372 Ga0496109_1656178
373 Ga0496111_0797671
374 Ga0496112_1029489
375 Ga0496113_0368557
376 Ga0496113_0949302
377 Ga0496114_0125119
378 Ga0496114_0147211
379 Ga0496115_0016227
380 Ga0496121_0001400
381 Ga0501041_0135710
382 Ga0501042_0157757
383 Ga0501046_0491780
384 Ga0501047_0258514
385 Ga0501067_0788187
386 Ga0501069_0120256
387 Ga0501072_0204685
388 Ga0501073_0047065
389 Ga0501074_0025908
390 Ga0501074_0784237
391 Ga0501076_0816410
392 Ga0501079_0020266
393 Ga0501080_0315693
394 Ga0501080_0923592
395 Ga0501081_0302558
396 Ga0501081_1488477
397 Ga0501083_0007574
398 Ga0501045_0762081
399 nmdc:mga0n895_1824206_c1
400 nmdc:mga0n895_895104_c1
401 nmdc:mga08x19_1135994_c1
402 Ga0495601_0003420
403 Ga0495619_0084780
404 Ga0495619_0289427
405 Ga0501082_0063171
406 Ga0530510_1134309

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04828

GFA

Glutathione-dependent formaldehyde-activating enzyme

44

133

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ajq-assembly3.cif.gz_E crystal structure of pa2722 from pseudomonas aeruginosa pao1 0.8763 5 137
3fac-assembly8.cif.gz_H crystal structure of rhodobacter sphaeroides protein rsp_2168. northeast structural genomics target rhr83. 0.8124 7 107
8ajq-assembly3.cif.gz_E crystal structure of pa2722 from pseudomonas aeruginosa pao1 0.8088 5 137
1xa8-assembly1.cif.gz_A crystal structure analysis of glutathione-dependent formaldehyde-activating enzyme (gfa) 0.8 1 136
1xa8-assembly1.cif.gz_A crystal structure analysis of glutathione-dependent formaldehyde-activating enzyme (gfa) 0.7844 1 136
ID Description Score Start End Superfamily
af_O14034_2_133_3.90.1590.10 Alpha Beta;Alpha-Beta Complex;glutathione-dependent formaldehyde- activating enzyme (gfa);glutathione-dependent formaldehyde- activating enzyme (gfa) 0.8611 6 131 3.90.1590.10
1xa8D00 Alpha Beta;Alpha-Beta Complex;glutathione-dependent formaldehyde- activating enzyme (gfa);glutathione-dependent formaldehyde- activating enzyme (gfa) 0.8053 1 136 3.90.1590.10
af_Q54VC9_11_133_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.8025 8 101 2.170.150.70
af_O14034_2_133_3.90.1590.10 Alpha Beta;Alpha-Beta Complex;glutathione-dependent formaldehyde- activating enzyme (gfa);glutathione-dependent formaldehyde- activating enzyme (gfa) 0.8021 6 131 3.90.1590.10
1xa8D00 Alpha Beta;Alpha-Beta Complex;glutathione-dependent formaldehyde- activating enzyme (gfa);glutathione-dependent formaldehyde- activating enzyme (gfa) 0.7895 1 136 3.90.1590.10
ID Description Score Start End GO Terms
AF-A0A640XYS7-F1-model_v4 GFA family protein 0.9831 3 113 GO:0016846
GO:0046872
AF-A0A1F2WC68-F1-model_v4 CENP-V/GFA domain-containing protein 0.9719 8 137 GO:0016846
GO:0046872
AF-A0A7V9CSV0-F1-model_v4 GFA family protein 0.9648 18 137 GO:0016846
GO:0046872
AF-A0A2V8THY7-F1-model_v4 CENP-V/GFA domain-containing protein 0.9643 6 134 GO:0016846
GO:0046872
AF-A0A538LZQ9-F1-model_v4 CENP-V/GFA domain-containing protein 0.9638 5 136 GO:0016846
GO:0046872

Map