F311259
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 203 | 79 | 406 | 255 |
Family's Representative Sequence
| Representative Sequence | 3300014325|Ga0163163_10202122|Ga0163163_102021222 |
| Length | 312 |
| Sequence | VDAGGDALAEWKVDKDRHGGASFGEQWASAIPRFADFAQCLAFLVNRYFVFRFSDPFSHRMRLISWNVNGVRAALKKGLLEFMTRADADVICFQEAKAHPGDVQHIAWPRGYEMIWNPATKKGYSGTITFTREKPKSVSLGIGLRNHDDEGRVITTEFPDFYVINVYQPNSQRGLTRLDYRVKEWDPAFLAFLKKLKKKKPVIFCGDLNVAHTEIDLANPKSNRRNAGFTDEERNNFTALLESGFVDTFREFEKGPNHYSWWSQMANCRARNIGWRVDYFVASDTLRPALKRAYIRPDVSGSDHCPVGLDVA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 2 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 3 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 9 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 10 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 12 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 13 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 14 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 15 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 17 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 18 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 19 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 20 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 21 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 22 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 23 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 24 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 25 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 26 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 27 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 28 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 29 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 30 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 31 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 32 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 33 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 34 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 35 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 36 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 37 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 38 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 39 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 40 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 41 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 42 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 43 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 44 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 45 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 46 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 47 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 48 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 49 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 50 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 51 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 52 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 53 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 54 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 55 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 56 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 57 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 59 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 60 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 61 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 62 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 63 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 64 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 65 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 66 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 67 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 68 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 69 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 70 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 71 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 72 | 3300049650 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought | Metagenome | Rhizosphere |
| 73 | 3300049675 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control | Metagenome | Rhizosphere |
| 74 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 75 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 76 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 77 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 78 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 79 | 2786546940 | Opitutaceae bacterium EW11 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.51 |
| Metatranscriptomes | 0 |
| Isolates | 0.49 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 96.55 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.9 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0163163_10202122 | 3300014325 | Bacteria | 2035 |
| 2 | rootH2_10014087 | 3300003320 | Bacteria | 17577 |
| 3 | rootH2_10059607 | 3300003320 | Bacteria | 5682 |
| 4 | rootH1_10115065 | 3300003323 | Unclassified | 3374 |
| 5 | rootH1_10115066 | 3300003323 | Bacteria | 3735 |
| 6 | Ga0070683_100016278 | 3300005329 | Bacteria | 6556 |
| 7 | Ga0070670_100532146 | 3300005331 | Bacteria | 1047 |
| 8 | Ga0068868_100376643 | 3300005338 | Bacteria | 1220 |
| 9 | Ga0070713_100004508 | 3300005436 | Bacteria | 9373 |
| 10 | Ga0068857_100312802 | 3300005577 | Bacteria | 1449 |
| 11 | Ga0068856_100001424 | 3300005614 | Bacteria | 25096 |
| 12 | Ga0068856_100306344 | 3300005614 | Bacteria | 1606 |
| 13 | Ga0070717_10000130 | 3300006028 | Bacteria | 55378 |
| 14 | Ga0157369_10158502 | 3300013105 | Bacteria | 2390 |
| 15 | Ga0163163_10178037 | 3300014325 | Bacteria | 2173 |
| 16 | Ga0207652_10316022 | 3300025921 | Bacteria | 1410 |
| 17 | Ga0207700_10032668 | 3300025928 | Bacteria | 3715 |
| 18 | Ga0207661_10016585 | 3300025944 | Bacteria | 5437 |
| 19 | Ga0207677_10153781 | 3300026023 | Bacteria | 1778 |
| 20 | Ga0207674_10302562 | 3300026116 | Bacteria | 1548 |
| 21 | Ga0265337_1001503 | 3300028556 | Bacteria | 11446 |
| 22 | Ga0265337_1005348 | 3300028556 | Bacteria | 5111 |
| 23 | Ga0265337_1007176 | 3300028556 | Bacteria | 4197 |
| 24 | Ga0265337_1025816 | 3300028556 | Bacteria | 1786 |
| 25 | Ga0265337_1038110 | 3300028556 | Bacteria | 1395 |
| 26 | Ga0265326_10021372 | 3300028558 | Bacteria | 1855 |
| 27 | Ga0265326_10045945 | 3300028558 | Bacteria | 1238 |
| 28 | Ga0265319_1000148 | 3300028563 | Bacteria | 52147 |
| 29 | Ga0265319_1001669 | 3300028563 | Bacteria | 12826 |
| 30 | Ga0265319_1001836 | 3300028563 | Bacteria | 12108 |
| 31 | Ga0265319_1002805 | 3300028563 | Bacteria | 9336 |
| 32 | Ga0265319_1004045 | 3300028563 | Bacteria | 7409 |
| 33 | Ga0265319_1009416 | 3300028563 | Bacteria | 4161 |
| 34 | Ga0265319_1024599 | 3300028563 | Bacteria | 2165 |
| 35 | Ga0265319_1041818 | 3300028563 | Bacteria | 1544 |
| 36 | Ga0265334_10004784 | 3300028573 | Bacteria | 5949 |
| 37 | Ga0265334_10017766 | 3300028573 | Bacteria | 2934 |
| 38 | Ga0265334_10026305 | 3300028573 | Unclassified | 2349 |
| 39 | Ga0265334_10054442 | 3300028573 | Unclassified | 1526 |
| 40 | Ga0265318_10000016 | 3300028577 | Bacteria | 184782 |
| 41 | Ga0265318_10000157 | 3300028577 | Bacteria | 60876 |
| 42 | Ga0265318_10001330 | 3300028577 | Bacteria | 14800 |
| 43 | Ga0265318_10002106 | 3300028577 | Bacteria | 10862 |
| 44 | Ga0265318_10002375 | 3300028577 | Bacteria | 10095 |
| 45 | Ga0265318_10003955 | 3300028577 | Bacteria | 7304 |
| 46 | Ga0265318_10084821 | 3300028577 | Unclassified | 1168 |
| 47 | Ga0265323_10000004 | 3300028653 | Bacteria | 197761 |
| 48 | Ga0265323_10001138 | 3300028653 | Bacteria | 13687 |
| 49 | Ga0265323_10003393 | 3300028653 | Bacteria | 7040 |
| 50 | Ga0265322_10000340 | 3300028654 | Bacteria | 19723 |
| 51 | Ga0265322_10000558 | 3300028654 | Bacteria | 14254 |
| 52 | Ga0265322_10024069 | 3300028654 | Bacteria | 1741 |
| 53 | Ga0265336_10000665 | 3300028666 | Bacteria | 18644 |
| 54 | Ga0265336_10007323 | 3300028666 | Bacteria | 3926 |
| 55 | Ga0307515_10075945 | 3300028794 | Bacteria | 4467 |
| 56 | Ga0265338_10000678 | 3300028800 | Bacteria | 58665 |
| 57 | Ga0265338_10005448 | 3300028800 | Bacteria | 16611 |
| 58 | Ga0265338_10017073 | 3300028800 | Bacteria | 7845 |
| 59 | Ga0265338_10095329 | 3300028800 | Bacteria | 2445 |
| 60 | Ga0265324_10001940 | 3300029957 | Bacteria | 11088 |
| 61 | Ga0265324_10022828 | 3300029957 | Bacteria | 2234 |
| 62 | Ga0265324_10086045 | 3300029957 | Bacteria | 1069 |
| 63 | Ga0265330_10011808 | 3300031235 | Bacteria | 4091 |
| 64 | Ga0265330_10014027 | 3300031235 | Bacteria | 3721 |
| 65 | Ga0265330_10125255 | 3300031235 | Unclassified | 1094 |
| 66 | Ga0265330_10140607 | 3300031235 | Bacteria | 1026 |
| 67 | Ga0265332_10060577 | 3300031238 | Bacteria | 1619 |
| 68 | Ga0265332_10064540 | 3300031238 | Bacteria | 1564 |
| 69 | Ga0265328_10005553 | 3300031239 | Bacteria | 5396 |
| 70 | Ga0265320_10000199 | 3300031240 | Bacteria | 49328 |
| 71 | Ga0265320_10001389 | 3300031240 | Bacteria | 17611 |
| 72 | Ga0265320_10001946 | 3300031240 | Bacteria | 14589 |
| 73 | Ga0265320_10003933 | 3300031240 | Bacteria | 9812 |
| 74 | Ga0265320_10007180 | 3300031240 | Bacteria | 6939 |
| 75 | Ga0265320_10007493 | 3300031240 | Bacteria | 6771 |
| 76 | Ga0265320_10009574 | 3300031240 | Bacteria | 5835 |
| 77 | Ga0265320_10017864 | 3300031240 | Bacteria | 3922 |
| 78 | Ga0265320_10043211 | 3300031240 | Bacteria | 2229 |
| 79 | Ga0265320_10043303 | 3300031240 | Bacteria | 2226 |
| 80 | Ga0265320_10051752 | 3300031240 | Bacteria | 1991 |
| 81 | Ga0265320_10066471 | 3300031240 | Bacteria | 1708 |
| 82 | Ga0265320_10102546 | 3300031240 | Bacteria | 1317 |
| 83 | Ga0265325_10007212 | 3300031241 | Bacteria | 6684 |
| 84 | Ga0265325_10012779 | 3300031241 | Bacteria | 4792 |
| 85 | Ga0265325_10183294 | 3300031241 | Bacteria | 974 |
| 86 | Ga0265340_10018027 | 3300031247 | Bacteria | 3649 |
| 87 | Ga0265340_10049221 | 3300031247 | Bacteria | 2047 |
| 88 | Ga0265331_10002824 | 3300031250 | Bacteria | 11514 |
| 89 | Ga0265327_10000029 | 3300031251 | Bacteria | 352607 |
| 90 | Ga0265327_10001172 | 3300031251 | Bacteria | 35590 |
| 91 | Ga0265327_10002468 | 3300031251 | Bacteria | 19466 |
| 92 | Ga0265327_10011031 | 3300031251 | Bacteria | 6283 |
| 93 | Ga0265327_10028243 | 3300031251 | Bacteria | 3213 |
| 94 | Ga0265327_10033165 | 3300031251 | Bacteria | 2882 |
| 95 | Ga0265327_10040113 | 3300031251 | Bacteria | 2535 |
| 96 | Ga0265316_10001324 | 3300031344 | Bacteria | 26657 |
| 97 | Ga0265316_10014845 | 3300031344 | Bacteria | 6835 |
| 98 | Ga0265316_10025358 | 3300031344 | Bacteria | 4949 |
| 99 | Ga0265316_10035659 | 3300031344 | Unclassified | 4029 |
| 100 | Ga0265316_10073407 | 3300031344 | Unclassified | 2635 |
| 101 | Ga0265316_10103835 | 3300031344 | Bacteria | 2157 |
| 102 | Ga0265316_10198237 | 3300031344 | Bacteria | 1489 |
| 103 | Ga0265316_10206344 | 3300031344 | Bacteria | 1455 |
| 104 | Ga0265316_10251507 | 3300031344 | Bacteria | 1298 |
| 105 | Ga0265316_10298319 | 3300031344 | Bacteria | 1174 |
| 106 | Ga0265313_10000467 | 3300031595 | Bacteria | 42239 |
| 107 | Ga0265313_10002866 | 3300031595 | Bacteria | 14475 |
| 108 | Ga0265313_10006186 | 3300031595 | Bacteria | 8577 |
| 109 | Ga0265313_10006392 | 3300031595 | Bacteria | 8356 |
| 110 | Ga0265313_10007347 | 3300031595 | Bacteria | 7552 |
| 111 | Ga0265313_10009706 | 3300031595 | Bacteria | 6206 |
| 112 | Ga0307508_10000014 | 3300031616 | Bacteria | 226567 |
| 113 | Ga0316575_10008979 | 3300031665 | Bacteria | 3652 |
| 114 | Ga0265314_10000432 | 3300031711 | Bacteria | 56071 |
| 115 | Ga0265314_10002265 | 3300031711 | Bacteria | 19923 |
| 116 | Ga0265314_10003441 | 3300031711 | Bacteria | 15298 |
| 117 | Ga0265314_10006031 | 3300031711 | Bacteria | 10794 |
| 118 | Ga0265314_10032799 | 3300031711 | Bacteria | 3816 |
| 119 | Ga0265314_10034225 | 3300031711 | Bacteria | 3716 |
| 120 | Ga0265314_10043354 | 3300031711 | Bacteria | 3200 |
| 121 | Ga0265314_10088398 | 3300031711 | Bacteria | 2024 |
| 122 | Ga0265314_10113123 | 3300031711 | Bacteria | 1721 |
| 123 | Ga0265342_10006311 | 3300031712 | Bacteria | 8840 |
| 124 | Ga0265342_10023318 | 3300031712 | Unclassified | 3920 |
| 125 | Ga0265342_10024930 | 3300031712 | Bacteria | 3768 |
| 126 | Ga0265342_10035603 | 3300031712 | Bacteria | 3046 |
| 127 | Ga0265342_10038491 | 3300031712 | Bacteria | 2912 |
| 128 | Ga0265342_10063103 | 3300031712 | Bacteria | 2178 |
| 129 | Ga0316576_10000180 | 3300031727 | Bacteria | 26234 |
| 130 | Ga0316576_10024581 | 3300031727 | Bacteria | 4207 |
| 131 | Ga0316576_10040702 | 3300031727 | Bacteria | 3341 |
| 132 | Ga0316576_10072679 | 3300031727 | Bacteria | 2539 |
| 133 | Ga0316576_10409113 | 3300031727 | Unclassified | 1005 |
| 134 | Ga0316578_10027084 | 3300031728 | Unclassified | 3238 |
| 135 | Ga0316583_10008140 | 3300032133 | Bacteria | 3777 |
| 136 | Ga0316574_0041068 | 3300035398 | Bacteria | 2850 |
| 137 | Ga0316574_0060021 | 3300035398 | Bacteria | 2386 |
| 138 | Ga0316574_0396626 | 3300035398 | Bacteria | 869 |
| 139 | Ga0373935_0016289 | 3300035692 | Bacteria | 4499 |
| 140 | Ga0373933_0053973 | 3300035724 | Bacteria | 2407 |
| 141 | Ga0316582_0355781 | 3300036647 | Unclassified | 1007 |
| 142 | Ga0316584_0065944 | 3300036712 | Unclassified | 2713 |
| 143 | Ga0316584_0094088 | 3300036712 | Unclassified | 2244 |
| 144 | Ga0316584_0292239 | 3300036712 | Bacteria | 1182 |
| 145 | Ga0439445_0027800 | 3300042004 | Bacteria | 1455 |
| 146 | Ga0451577_0000023 | 3300042876 | Bacteria | 419051 |
| 147 | Ga0451577_0217868 | 3300042876 | Bacteria | 1725 |
| 148 | Ga0451577_0323311 | 3300042876 | Bacteria | 1399 |
| 149 | Ga0453683_0000626 | 3300044673 | Bacteria | 38554 |
| 150 | Ga0453683_0035723 | 3300044673 | Bacteria | 3131 |
| 151 | Ga0466961_0114794 | 3300044693 | Bacteria | 1693 |
| 152 | Ga0453684_0014156 | 3300044712 | Bacteria | 12813 |
| 153 | Ga0453684_0031095 | 3300044712 | Bacteria | 7516 |
| 154 | Ga0453684_0247397 | 3300044712 | Bacteria | 2049 |
| 155 | Ga0453684_0303591 | 3300044712 | Bacteria | 1813 |
| 156 | Ga0453684_0591820 | 3300044712 | Bacteria | 1217 |
| 157 | Ga0453684_0638356 | 3300044712 | Bacteria | 1163 |
| 158 | Ga0451576_0000126 | 3300045051 | Bacteria | 193283 |
| 159 | Ga0451576_0000409 | 3300045051 | Bacteria | 99890 |
| 160 | Ga0451576_0006123 | 3300045051 | Bacteria | 14825 |
| 161 | Ga0451576_0077820 | 3300045051 | Bacteria | 3452 |
| 162 | Ga0466967_0012545 | 3300045976 | Bacteria | 6489 |
| 163 | Ga0495651_0197896 | 3300046462 | Bacteria | 1409 |
| 164 | Ga0501031_0005845 | 3300049568 | Bacteria | 8016 |
| 165 | Ga0501032_0000815 | 3300049569 | Bacteria | 25305 |
| 166 | Ga0501032_0000985 | 3300049569 | Bacteria | 22977 |
| 167 | Ga0501032_0122335 | 3300049569 | Bacteria | 1720 |
| 168 | Ga0501033_0005409 | 3300049570 | Bacteria | 10121 |
| 169 | Ga0501033_0027875 | 3300049570 | Bacteria | 4244 |
| 170 | Ga0501034_0065425 | 3300049571 | Bacteria | 3648 |
| 171 | Ga0501034_0090772 | 3300049571 | Bacteria | 3052 |
| 172 | Ga0501034_0160258 | 3300049571 | Bacteria | 2221 |
| 173 | Ga0501036_0010132 | 3300049572 | Bacteria | 7768 |
| 174 | Ga0501037_0000827 | 3300049573 | Bacteria | 23157 |
| 175 | Ga0501037_0193052 | 3300049573 | Bacteria | 1441 |
| 176 | Ga0501038_0000417 | 3300049574 | Bacteria | 36952 |
| 177 | Ga0501040_0307304 | 3300049576 | Bacteria | 1134 |
| 178 | Ga0501042_0007124 | 3300049578 | Bacteria | 7312 |
| 179 | Ga0501046_0002871 | 3300049580 | Bacteria | 15976 |
| 180 | Ga0501046_0022842 | 3300049580 | Bacteria | 5151 |
| 181 | Ga0501046_0023585 | 3300049580 | Bacteria | 5058 |
| 182 | Ga0501046_0035823 | 3300049580 | Bacteria | 3997 |
| 183 | Ga0501047_0003741 | 3300049581 | Bacteria | 14327 |
| 184 | Ga0501047_0018309 | 3300049581 | Bacteria | 6712 |
| 185 | Ga0501047_0032051 | 3300049581 | Bacteria | 5071 |
| 186 | Ga0501047_0048995 | 3300049581 | Bacteria | 4079 |
| 187 | Ga0501047_0129547 | 3300049581 | Bacteria | 2403 |
| 188 | Ga0501048_0001109 | 3300049582 | Bacteria | 20205 |
| 189 | Ga0501068_0030246 | 3300049584 | Bacteria | 3211 |
| 190 | Ga0501070_0199457 | 3300049586 | Bacteria | 1644 |
| 191 | Ga0501199_015778 | 3300049650 | Unclassified | 847 |
| 192 | Ga0501243_001433 | 3300049675 | Bacteria | 3416 |
| 193 | Ga0501080_0407254 | 3300049742 | Bacteria | 1223 |
| 194 | Ga0501083_0016703 | 3300049744 | Bacteria | 5129 |
| 195 | Ga0501035_0000460 | 3300049822 | Bacteria | 45701 |
| 196 | Ga0501035_0001549 | 3300049822 | Bacteria | 23426 |
| 197 | Ga0501035_0008606 | 3300049822 | Bacteria | 9496 |
| 198 | Ga0501044_0000283 | 3300049823 | Bacteria | 64619 |
| 199 | Ga0501044_0005233 | 3300049823 | Bacteria | 14429 |
| 200 | Ga0501044_0045308 | 3300049823 | Bacteria | 4557 |
| 201 | Ga0501044_0067363 | 3300049823 | Bacteria | 3647 |
| 202 | Ga0501045_0047605 | 3300049824 | Bacteria | 3124 |
| 203 | 2788435464 | 2786546940 | Bacteria | 6396474 |
| 204 | Ga0163163_10202122 | |||
| 205 | rootH2_10014087 | |||
| 206 | rootH2_10059607 | |||
| 207 | rootH1_10115065 | |||
| 208 | rootH1_10115066 | |||
| 209 | Ga0070683_100016278 | |||
| 210 | Ga0070670_100532146 | |||
| 211 | Ga0068868_100376643 | |||
| 212 | Ga0070713_100004508 | |||
| 213 | Ga0068857_100312802 | |||
| 214 | Ga0068856_100001424 | |||
| 215 | Ga0068856_100306344 | |||
| 216 | Ga0070717_10000130 | |||
| 217 | Ga0157369_10158502 | |||
| 218 | Ga0163163_10178037 | |||
| 219 | Ga0207652_10316022 | |||
| 220 | Ga0207700_10032668 | |||
| 221 | Ga0207661_10016585 | |||
| 222 | Ga0207677_10153781 | |||
| 223 | Ga0207674_10302562 | |||
| 224 | Ga0265337_1001503 | |||
| 225 | Ga0265337_1005348 | |||
| 226 | Ga0265337_1007176 | |||
| 227 | Ga0265337_1025816 | |||
| 228 | Ga0265337_1038110 | |||
| 229 | Ga0265326_10021372 | |||
| 230 | Ga0265326_10045945 | |||
| 231 | Ga0265319_1000148 | |||
| 232 | Ga0265319_1001669 | |||
| 233 | Ga0265319_1001836 | |||
| 234 | Ga0265319_1002805 | |||
| 235 | Ga0265319_1004045 | |||
| 236 | Ga0265319_1009416 | |||
| 237 | Ga0265319_1024599 | |||
| 238 | Ga0265319_1041818 | |||
| 239 | Ga0265334_10004784 | |||
| 240 | Ga0265334_10017766 | |||
| 241 | Ga0265334_10026305 | |||
| 242 | Ga0265334_10054442 | |||
| 243 | Ga0265318_10000016 | |||
| 244 | Ga0265318_10000157 | |||
| 245 | Ga0265318_10001330 | |||
| 246 | Ga0265318_10002106 | |||
| 247 | Ga0265318_10002375 | |||
| 248 | Ga0265318_10003955 | |||
| 249 | Ga0265318_10084821 | |||
| 250 | Ga0265323_10000004 | |||
| 251 | Ga0265323_10001138 | |||
| 252 | Ga0265323_10003393 | |||
| 253 | Ga0265322_10000340 | |||
| 254 | Ga0265322_10000558 | |||
| 255 | Ga0265322_10024069 | |||
| 256 | Ga0265336_10000665 | |||
| 257 | Ga0265336_10007323 | |||
| 258 | Ga0307515_10075945 | |||
| 259 | Ga0265338_10000678 | |||
| 260 | Ga0265338_10005448 | |||
| 261 | Ga0265338_10017073 | |||
| 262 | Ga0265338_10095329 | |||
| 263 | Ga0265324_10001940 | |||
| 264 | Ga0265324_10022828 | |||
| 265 | Ga0265324_10086045 | |||
| 266 | Ga0265330_10011808 | |||
| 267 | Ga0265330_10014027 | |||
| 268 | Ga0265330_10125255 | |||
| 269 | Ga0265330_10140607 | |||
| 270 | Ga0265332_10060577 | |||
| 271 | Ga0265332_10064540 | |||
| 272 | Ga0265328_10005553 | |||
| 273 | Ga0265320_10000199 | |||
| 274 | Ga0265320_10001389 | |||
| 275 | Ga0265320_10001946 | |||
| 276 | Ga0265320_10003933 | |||
| 277 | Ga0265320_10007180 | |||
| 278 | Ga0265320_10007493 | |||
| 279 | Ga0265320_10009574 | |||
| 280 | Ga0265320_10017864 | |||
| 281 | Ga0265320_10043211 | |||
| 282 | Ga0265320_10043303 | |||
| 283 | Ga0265320_10051752 | |||
| 284 | Ga0265320_10066471 | |||
| 285 | Ga0265320_10102546 | |||
| 286 | Ga0265325_10007212 | |||
| 287 | Ga0265325_10012779 | |||
| 288 | Ga0265325_10183294 | |||
| 289 | Ga0265340_10018027 | |||
| 290 | Ga0265340_10049221 | |||
| 291 | Ga0265331_10002824 | |||
| 292 | Ga0265327_10000029 | |||
| 293 | Ga0265327_10001172 | |||
| 294 | Ga0265327_10002468 | |||
| 295 | Ga0265327_10011031 | |||
| 296 | Ga0265327_10028243 | |||
| 297 | Ga0265327_10033165 | |||
| 298 | Ga0265327_10040113 | |||
| 299 | Ga0265316_10001324 | |||
| 300 | Ga0265316_10014845 | |||
| 301 | Ga0265316_10025358 | |||
| 302 | Ga0265316_10035659 | |||
| 303 | Ga0265316_10073407 | |||
| 304 | Ga0265316_10103835 | |||
| 305 | Ga0265316_10198237 | |||
| 306 | Ga0265316_10206344 | |||
| 307 | Ga0265316_10251507 | |||
| 308 | Ga0265316_10298319 | |||
| 309 | Ga0265313_10000467 | |||
| 310 | Ga0265313_10002866 | |||
| 311 | Ga0265313_10006186 | |||
| 312 | Ga0265313_10006392 | |||
| 313 | Ga0265313_10007347 | |||
| 314 | Ga0265313_10009706 | |||
| 315 | Ga0307508_10000014 | |||
| 316 | Ga0316575_10008979 | |||
| 317 | Ga0265314_10000432 | |||
| 318 | Ga0265314_10002265 | |||
| 319 | Ga0265314_10003441 | |||
| 320 | Ga0265314_10006031 | |||
| 321 | Ga0265314_10032799 | |||
| 322 | Ga0265314_10034225 | |||
| 323 | Ga0265314_10043354 | |||
| 324 | Ga0265314_10088398 | |||
| 325 | Ga0265314_10113123 | |||
| 326 | Ga0265342_10006311 | |||
| 327 | Ga0265342_10023318 | |||
| 328 | Ga0265342_10024930 | |||
| 329 | Ga0265342_10035603 | |||
| 330 | Ga0265342_10038491 | |||
| 331 | Ga0265342_10063103 | |||
| 332 | Ga0316576_10000180 | |||
| 333 | Ga0316576_10024581 | |||
| 334 | Ga0316576_10040702 | |||
| 335 | Ga0316576_10072679 | |||
| 336 | Ga0316576_10409113 | |||
| 337 | Ga0316578_10027084 | |||
| 338 | Ga0316583_10008140 | |||
| 339 | Ga0316574_0041068 | |||
| 340 | Ga0316574_0060021 | |||
| 341 | Ga0316574_0396626 | |||
| 342 | Ga0373935_0016289 | |||
| 343 | Ga0373933_0053973 | |||
| 344 | Ga0316582_0355781 | |||
| 345 | Ga0316584_0065944 | |||
| 346 | Ga0316584_0094088 | |||
| 347 | Ga0316584_0292239 | |||
| 348 | Ga0439445_0027800 | |||
| 349 | Ga0451577_0000023 | |||
| 350 | Ga0451577_0217868 | |||
| 351 | Ga0451577_0323311 | |||
| 352 | Ga0453683_0000626 | |||
| 353 | Ga0453683_0035723 | |||
| 354 | Ga0466961_0114794 | |||
| 355 | Ga0453684_0014156 | |||
| 356 | Ga0453684_0031095 | |||
| 357 | Ga0453684_0247397 | |||
| 358 | Ga0453684_0303591 | |||
| 359 | Ga0453684_0591820 | |||
| 360 | Ga0453684_0638356 | |||
| 361 | Ga0451576_0000126 | |||
| 362 | Ga0451576_0000409 | |||
| 363 | Ga0451576_0006123 | |||
| 364 | Ga0451576_0077820 | |||
| 365 | Ga0466967_0012545 | |||
| 366 | Ga0495651_0197896 | |||
| 367 | Ga0501031_0005845 | |||
| 368 | Ga0501032_0000815 | |||
| 369 | Ga0501032_0000985 | |||
| 370 | Ga0501032_0122335 | |||
| 371 | Ga0501033_0005409 | |||
| 372 | Ga0501033_0027875 | |||
| 373 | Ga0501034_0065425 | |||
| 374 | Ga0501034_0090772 | |||
| 375 | Ga0501034_0160258 | |||
| 376 | Ga0501036_0010132 | |||
| 377 | Ga0501037_0000827 | |||
| 378 | Ga0501037_0193052 | |||
| 379 | Ga0501038_0000417 | |||
| 380 | Ga0501040_0307304 | |||
| 381 | Ga0501042_0007124 | |||
| 382 | Ga0501046_0002871 | |||
| 383 | Ga0501046_0022842 | |||
| 384 | Ga0501046_0023585 | |||
| 385 | Ga0501046_0035823 | |||
| 386 | Ga0501047_0003741 | |||
| 387 | Ga0501047_0018309 | |||
| 388 | Ga0501047_0032051 | |||
| 389 | Ga0501047_0048995 | |||
| 390 | Ga0501047_0129547 | |||
| 391 | Ga0501048_0001109 | |||
| 392 | Ga0501068_0030246 | |||
| 393 | Ga0501070_0199457 | |||
| 394 | Ga0501199_015778 | |||
| 395 | Ga0501243_001433 | |||
| 396 | Ga0501080_0407254 | |||
| 397 | Ga0501083_0016703 | |||
| 398 | Ga0501035_0000460 | |||
| 399 | Ga0501035_0001549 | |||
| 400 | Ga0501035_0008606 | |||
| 401 | Ga0501044_0000283 | |||
| 402 | Ga0501044_0005233 | |||
| 403 | Ga0501044_0045308 | |||
| 404 | Ga0501044_0067363 | |||
| 405 | Ga0501045_0047605 | |||
| 406 | 2788435464 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8igi-assembly2.cif.gz_B | crystal structure of hp1526 (xtha)- a base excision dna repair protein in helicobacter pylori | 0.9046 | 1 | 251 |
| 5cfe-assembly1.cif.gz_A | bacillus subtilis ap endonuclease exoa | 0.9024 | 1 | 253 |
| 5cfe-assembly1.cif.gz_A | bacillus subtilis ap endonuclease exoa | 0.8985 | 1 | 253 |
| 1hd7-assembly1.cif.gz_A | a second divalent metal ion in the active site of a new crystal form of human apurinic/apyridinimic endonuclease, ape1, and its implications for the catalytic mechanism | 0.8942 | 1 | 253 |
| 8igi-assembly2.cif.gz_B | crystal structure of hp1526 (xtha)- a base excision dna repair protein in helicobacter pylori | 0.8941 | 1 | 251 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P51173_13_359_3.60.10.10 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9159 | 1 | 252 | 3.60.10.10 |
| af_P51173_13_359_3.60.10.10 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9089 | 1 | 252 | 3.60.10.10 |
| af_Q5VQJ9_207_498_3.60.10.10 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9068 | 1 | 249 | 3.60.10.10 |
| 5cfeA00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9024 | 1 | 253 | 3.60.10.10 |
| 5cfeA00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.8985 | 1 | 253 | 3.60.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A350TZS6-F1-model_v4 | deleted | 0.97 | 1 | 121 |
|
| AF-A0A817CGJ8-F1-model_v4 | exodeoxyribonuclease III (EC 3.1.11.2) | 0.9677 | 1 | 142 |
GO:0003906
GO:0005634 GO:0006284 GO:0008081 GO:0008311 GO:0046872 |
| AF-A0A7X8V822-F1-model_v4 | Exodeoxyribonuclease III | 0.9652 | 1 | 107 |
GO:0003677
GO:0003906 GO:0004519 GO:0006284 GO:0008081 GO:0008311 GO:0046872 |
| AF-J0QVS9-F1-model_v4 | deleted | 0.9645 | 1 | 131 |
|
| AF-W4VCZ7-F1-model_v4 | Exodeoxyribonuclease III | 0.9644 | 18 | 134 |
GO:0003677
GO:0003906 GO:0004519 GO:0006284 GO:0008081 GO:0008311 GO:0046872 |