F310672
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 203 | 131 | 201 | 434 |
Family's Representative Sequence
| Representative Sequence | 3300003322|rootL2_10203763|rootL2_102037635 |
| Length | 470 |
| Sequence | MESILNNLTQIAPLADEITQLKPVEIAALGVPGTSSAPMHYYSLNHNAPKATFAEATVNGQAPDKGLYFPKYIPKLPQDFIKNLRNYSKEEVGVTVMKPYVGNSLPEAELERIVSETVNFDFPLVKVTDDIYSLELFHGPTLAFKDVGARFMSRCLGYFNRNSSKHTTVLVATSGDTGGAVANGFLGVEGVNVVILYPSGKVSPIQELQLTTPGQNITALEVNGTFDDCQAMVKRVFTDADLNAALTLTSANSINVARWLPQQLYYFFAYQQWQHNEAPVICVPSGNFGNICAGLLAYMSGLPVKHFIAACNANDVVLGFLHSGEYMPKPAVATISNAMDVGNPSNFVRIMEMFGQRLGDIKRVLSAVSINDVTTEQTIKTVFEQQGYLLDPHGAVGYHALSNYLAEHAGDKGIFLETAHPVKFPEVVERATGKQIPFPQGVQHLLSLPKHSVAMPASFDALKEWLLNTK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2914759650 | Rhizosphaericola mali | Isolate | Rhizosphere |
| 2 | 2958512119 | Flavobacterium sp. Sd200 | Isolate | Rhizosphere |
| 3 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 4 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 10 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 11 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 12 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 17 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 22 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 24 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 26 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 28 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 30 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 31 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 32 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 33 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 34 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 35 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 36 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 37 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 38 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 39 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 40 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 41 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 43 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 44 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 45 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 100 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 101 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 102 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 103 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 104 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 105 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 106 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 107 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 108 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 109 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 110 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 111 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 112 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 113 | 3300042131 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 | Metagenome | Rhizosphere |
| 114 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 115 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 116 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 117 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 118 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 122 | 3300049521 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought | Metagenome | Rhizosphere |
| 123 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049661 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control | Metagenome | Rhizosphere |
| 126 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 127 | 3300049675 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control | Metagenome | Rhizosphere |
| 128 | 3300049688 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought | Metagenome | Rhizosphere |
| 129 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 130 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 131 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.01 |
| Metatranscriptomes | 0 |
| Isolates | 0.99 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.99 |
| Nodule | 0 |
| Rhizoplane | 0.49 |
| Rhizosphere | 96.55 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.97 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootL2_10203763 | 3300003322 | Bacteria | 3960 |
| 2 | rootL2_10206117 | 3300003322 | Bacteria | 5811 |
| 3 | Ga0065707_10086349 | 3300005295 | Bacteria | 5520 |
| 4 | Ga0070658_10037838 | 3300005327 | Bacteria | 3891 |
| 5 | Ga0070658_10067185 | 3300005327 | Bacteria | 2929 |
| 6 | Ga0070676_10045184 | 3300005328 | Bacteria | 2565 |
| 7 | Ga0070690_100063971 | 3300005330 | Bacteria | 2375 |
| 8 | Ga0070670_100006973 | 3300005331 | Bacteria | 9577 |
| 9 | Ga0070670_100045009 | 3300005331 | Bacteria | 3793 |
| 10 | Ga0070670_100103447 | 3300005331 | Bacteria | 2453 |
| 11 | Ga0068869_100042592 | 3300005334 | Bacteria | 3255 |
| 12 | Ga0068868_100019078 | 3300005338 | Bacteria | 5134 |
| 13 | Ga0068868_100072406 | 3300005338 | Bacteria | 2749 |
| 14 | Ga0070689_100023646 | 3300005340 | Bacteria | 4603 |
| 15 | Ga0070689_100042489 | 3300005340 | Unclassified | 3491 |
| 16 | Ga0070668_100002932 | 3300005347 | Bacteria | 12610 |
| 17 | Ga0070668_100062920 | 3300005347 | Unclassified | 2876 |
| 18 | Ga0070669_100003052 | 3300005353 | Bacteria | 12044 |
| 19 | Ga0070669_100152476 | 3300005353 | Bacteria | 1790 |
| 20 | Ga0070675_100028751 | 3300005354 | Bacteria | 4477 |
| 21 | Ga0070671_100219208 | 3300005355 | Bacteria | 1614 |
| 22 | Ga0070688_100001211 | 3300005365 | Bacteria | 12840 |
| 23 | Ga0070688_100079073 | 3300005365 | Bacteria | 2123 |
| 24 | Ga0070659_100017266 | 3300005366 | Bacteria | 5426 |
| 25 | Ga0070667_100246526 | 3300005367 | Bacteria | 1596 |
| 26 | Ga0070678_100083404 | 3300005456 | Bacteria | 2429 |
| 27 | Ga0070681_10035560 | 3300005458 | Bacteria | 5004 |
| 28 | Ga0070681_10120037 | 3300005458 | Bacteria | 2564 |
| 29 | Ga0068867_100144379 | 3300005459 | Bacteria | 1863 |
| 30 | Ga0070698_100001232 | 3300005471 | Bacteria | 28474 |
| 31 | Ga0070698_100001401 | 3300005471 | Bacteria | 26708 |
| 32 | Ga0070698_100037335 | 3300005471 | Bacteria | 5010 |
| 33 | Ga0070679_100337400 | 3300005530 | Bacteria | 1455 |
| 34 | Ga0070684_100238366 | 3300005535 | Bacteria | 1661 |
| 35 | Ga0068853_100063546 | 3300005539 | Bacteria | 3198 |
| 36 | Ga0070672_100030071 | 3300005543 | Bacteria | 4077 |
| 37 | Ga0070672_100101544 | 3300005543 | Bacteria | 2333 |
| 38 | Ga0068855_100018434 | 3300005563 | Bacteria | 8387 |
| 39 | Ga0068855_100094619 | 3300005563 | Bacteria | 3444 |
| 40 | Ga0070664_100235182 | 3300005564 | Bacteria | 1643 |
| 41 | Ga0068857_100170450 | 3300005577 | Bacteria | 1978 |
| 42 | Ga0068856_100029471 | 3300005614 | Bacteria | 5361 |
| 43 | Ga0068852_100089828 | 3300005616 | Bacteria | 2746 |
| 44 | Ga0068859_100006400 | 3300005617 | Bacteria | 11949 |
| 45 | Ga0068859_100039478 | 3300005617 | Bacteria | 4735 |
| 46 | Ga0068859_100110562 | 3300005617 | Bacteria | 2810 |
| 47 | Ga0068864_100018750 | 3300005618 | Bacteria | 5782 |
| 48 | Ga0068864_100063498 | 3300005618 | Bacteria | 3200 |
| 49 | Ga0068864_100073499 | 3300005618 | Bacteria | 2981 |
| 50 | Ga0068866_10020257 | 3300005718 | Bacteria | 3045 |
| 51 | Ga0068861_100001430 | 3300005719 | Bacteria | 15064 |
| 52 | Ga0068861_100004878 | 3300005719 | Bacteria | 9029 |
| 53 | Ga0068861_100031160 | 3300005719 | Bacteria | 3915 |
| 54 | Ga0068861_100108081 | 3300005719 | Bacteria | 2225 |
| 55 | Ga0068858_100031026 | 3300005842 | Bacteria | 4963 |
| 56 | Ga0068858_100070647 | 3300005842 | Bacteria | 3236 |
| 57 | Ga0068858_100177719 | 3300005842 | Bacteria | 2009 |
| 58 | Ga0068860_100022258 | 3300005843 | Bacteria | 6134 |
| 59 | Ga0068860_100076081 | 3300005843 | Bacteria | 3192 |
| 60 | Ga0068860_100153311 | 3300005843 | Bacteria | 2220 |
| 61 | Ga0068860_100193451 | 3300005843 | Unclassified | 1969 |
| 62 | Ga0068862_100014331 | 3300005844 | Bacteria | 6576 |
| 63 | Ga0068862_100048908 | 3300005844 | Bacteria | 3611 |
| 64 | Ga0068862_100082653 | 3300005844 | Bacteria | 2788 |
| 65 | Ga0081539_10000042 | 3300005985 | Bacteria | 289955 |
| 66 | Ga0075366_10015741 | 3300006195 | Bacteria | 4342 |
| 67 | Ga0097621_100017635 | 3300006237 | Bacteria | 5427 |
| 68 | Ga0097621_100063250 | 3300006237 | Bacteria | 3041 |
| 69 | Ga0097621_100221408 | 3300006237 | Bacteria | 1649 |
| 70 | Ga0075428_100001125 | 3300006844 | Bacteria | 28571 |
| 71 | Ga0075431_100018153 | 3300006847 | Bacteria | 7157 |
| 72 | Ga0075429_100000105 | 3300006880 | Bacteria | 47284 |
| 73 | Ga0097620_100006400 | 3300006931 | Bacteria | 11949 |
| 74 | Ga0097620_100039478 | 3300006931 | Bacteria | 4735 |
| 75 | Ga0097620_100110566 | 3300006931 | Bacteria | 2810 |
| 76 | Ga0105240_10002165 | 3300009093 | Bacteria | 32084 |
| 77 | Ga0111539_10026511 | 3300009094 | Bacteria | 7085 |
| 78 | Ga0111539_10123030 | 3300009094 | Bacteria | 3041 |
| 79 | Ga0105247_10007772 | 3300009101 | Bacteria | 6561 |
| 80 | Ga0105242_10223205 | 3300009176 | Bacteria | 1685 |
| 81 | Ga0105248_10040102 | 3300009177 | Bacteria | 5249 |
| 82 | Ga0105237_10002388 | 3300009545 | Bacteria | 23306 |
| 83 | Ga0105249_10007916 | 3300009553 | Bacteria | 9262 |
| 84 | Ga0105249_10044297 | 3300009553 | Bacteria | 4046 |
| 85 | Ga0105249_10054874 | 3300009553 | Unclassified | 3644 |
| 86 | Ga0105249_10063953 | 3300009553 | Bacteria | 3381 |
| 87 | Ga0105249_10077068 | 3300009553 | Bacteria | 3091 |
| 88 | Ga0105239_10140930 | 3300010375 | Bacteria | 2686 |
| 89 | Ga0105239_10205253 | 3300010375 | Unclassified | 2208 |
| 90 | Ga0157373_10104988 | 3300013100 | Bacteria | 1987 |
| 91 | Ga0157371_10006479 | 3300013102 | Bacteria | 9650 |
| 92 | Ga0157371_10163509 | 3300013102 | Bacteria | 1589 |
| 93 | Ga0157370_10010558 | 3300013104 | Bacteria | 9726 |
| 94 | Ga0157369_10013715 | 3300013105 | Bacteria | 9162 |
| 95 | Ga0157369_10064626 | 3300013105 | Bacteria | 3940 |
| 96 | Ga0157369_10275324 | 3300013105 | Bacteria | 1753 |
| 97 | Ga0157374_10087565 | 3300013296 | Bacteria | 2965 |
| 98 | Ga0157378_10008458 | 3300013297 | Bacteria | 8964 |
| 99 | Ga0157378_10354559 | 3300013297 | Bacteria | 1434 |
| 100 | Ga0163162_10000437 | 3300013306 | Bacteria | 38437 |
| 101 | Ga0163162_10042203 | 3300013306 | Bacteria | 4565 |
| 102 | Ga0163162_10063114 | 3300013306 | Bacteria | 3746 |
| 103 | Ga0163162_10095617 | 3300013306 | Bacteria | 3058 |
| 104 | Ga0163162_10169192 | 3300013306 | Bacteria | 2310 |
| 105 | Ga0157372_10011459 | 3300013307 | Bacteria | 9428 |
| 106 | Ga0157372_10056404 | 3300013307 | Bacteria | 4389 |
| 107 | Ga0157372_10110535 | 3300013307 | Bacteria | 3148 |
| 108 | Ga0157372_10319579 | 3300013307 | Bacteria | 1807 |
| 109 | Ga0157375_10009549 | 3300013308 | Bacteria | 8516 |
| 110 | Ga0157375_10045272 | 3300013308 | Unclassified | 4282 |
| 111 | Ga0163163_10008831 | 3300014325 | Bacteria | 8972 |
| 112 | Ga0163163_10074795 | 3300014325 | Bacteria | 3380 |
| 113 | Ga0157380_10001077 | 3300014326 | Bacteria | 17539 |
| 114 | Ga0157377_10000492 | 3300014745 | Bacteria | 16778 |
| 115 | Ga0157379_10189237 | 3300014968 | Bacteria | 1860 |
| 116 | Ga0163161_10007280 | 3300017792 | Bacteria | 7637 |
| 117 | Ga0163161_10028518 | 3300017792 | Bacteria | 3965 |
| 118 | Ga0163161_10065188 | 3300017792 | Bacteria | 2658 |
| 119 | Ga0207710_10001046 | 3300025900 | Bacteria | 14273 |
| 120 | Ga0207647_10007406 | 3300025904 | Bacteria | 7930 |
| 121 | Ga0207645_10041892 | 3300025907 | Bacteria | 2930 |
| 122 | Ga0207645_10118687 | 3300025907 | Bacteria | 1716 |
| 123 | Ga0207705_10055729 | 3300025909 | Bacteria | 2850 |
| 124 | Ga0207705_10132043 | 3300025909 | Bacteria | 1859 |
| 125 | Ga0207695_10000962 | 3300025913 | Bacteria | 51331 |
| 126 | Ga0207662_10172730 | 3300025918 | Bacteria | 1386 |
| 127 | Ga0207657_10009358 | 3300025919 | Bacteria | 9855 |
| 128 | Ga0207649_10116165 | 3300025920 | Bacteria | 1796 |
| 129 | Ga0207650_10006263 | 3300025925 | Bacteria | 8110 |
| 130 | Ga0207659_10108999 | 3300025926 | Unclassified | 2101 |
| 131 | Ga0207644_10121984 | 3300025931 | Bacteria | 1985 |
| 132 | Ga0207690_10013661 | 3300025932 | Bacteria | 4885 |
| 133 | Ga0207706_10001829 | 3300025933 | Bacteria | 20895 |
| 134 | Ga0207706_10047415 | 3300025933 | Unclassified | 3801 |
| 135 | Ga0207706_10141828 | 3300025933 | Bacteria | 2114 |
| 136 | Ga0207691_10057319 | 3300025940 | Unclassified | 3546 |
| 137 | Ga0207691_10143019 | 3300025940 | Bacteria | 2107 |
| 138 | Ga0207689_10023470 | 3300025942 | Bacteria | 5177 |
| 139 | Ga0207667_10136168 | 3300025949 | Bacteria | 2529 |
| 140 | Ga0207640_10065199 | 3300025981 | Bacteria | 2429 |
| 141 | Ga0207658_10216394 | 3300025986 | Bacteria | 1609 |
| 142 | Ga0207677_10013301 | 3300026023 | Bacteria | 4764 |
| 143 | Ga0207677_10141024 | 3300026023 | Bacteria | 1845 |
| 144 | Ga0207703_10063044 | 3300026035 | Bacteria | 3038 |
| 145 | Ga0207639_10119833 | 3300026041 | Bacteria | 2160 |
| 146 | Ga0207708_10019863 | 3300026075 | Bacteria | 5065 |
| 147 | Ga0207641_10029173 | 3300026088 | Bacteria | 4562 |
| 148 | Ga0207648_10009064 | 3300026089 | Bacteria | 9571 |
| 149 | Ga0207676_10023239 | 3300026095 | Bacteria | 4570 |
| 150 | Ga0207676_10099452 | 3300026095 | Bacteria | 2407 |
| 151 | Ga0207674_10003052 | 3300026116 | Bacteria | 20715 |
| 152 | Ga0207674_10031792 | 3300026116 | Bacteria | 5541 |
| 153 | Ga0207674_10049524 | 3300026116 | Unclassified | 4296 |
| 154 | Ga0207675_100005089 | 3300026118 | Bacteria | 12650 |
| 155 | Ga0207675_100019361 | 3300026118 | Bacteria | 6351 |
| 156 | Ga0207675_100022500 | 3300026118 | Bacteria | 5869 |
| 157 | Ga0207683_10020060 | 3300026121 | Bacteria | 5713 |
| 158 | Ga0207698_10161469 | 3300026142 | Bacteria | 1960 |
| 159 | Ga0268265_10033734 | 3300028380 | Unclassified | 3724 |
| 160 | Ga0268264_10017151 | 3300028381 | Bacteria | 5930 |
| 161 | Ga0268264_10239992 | 3300028381 | Bacteria | 1678 |
| 162 | Ga0265327_10000152 | 3300031251 | Bacteria | 149065 |
| 163 | Ga0265327_10015202 | 3300031251 | Bacteria | 4985 |
| 164 | Ga0307408_100236046 | 3300031548 | Bacteria | 1500 |
| 165 | Ga0307405_10084450 | 3300031731 | Bacteria | 2084 |
| 166 | Ga0307413_10000370 | 3300031824 | Bacteria | 14414 |
| 167 | Ga0307413_10002070 | 3300031824 | Bacteria | 8015 |
| 168 | Ga0307410_10000972 | 3300031852 | Bacteria | 12323 |
| 169 | Ga0307410_10003844 | 3300031852 | Bacteria | 7630 |
| 170 | Ga0307407_10010410 | 3300031903 | Bacteria | 4384 |
| 171 | Ga0307409_100067930 | 3300031995 | Bacteria | 2817 |
| 172 | Ga0307409_100216852 | 3300031995 | Bacteria | 1724 |
| 173 | Ga0307411_10000898 | 3300032005 | Bacteria | 11265 |
| 174 | Ga0307411_10048705 | 3300032005 | Bacteria | 2748 |
| 175 | Ga0307415_100008104 | 3300032126 | Bacteria | 5804 |
| 176 | Ga0307510_10000119 | 3300033180 | Bacteria | 62835 |
| 177 | Ga0395898_0103996 | 3300037466 | Bacteria | 2724 |
| 178 | Ga0436365_1762313 | 3300039437 | Bacteria | 1950 |
| 179 | Ga0439433_0003047 | 3300041999 | Bacteria | 3587 |
| 180 | Ga0439457_004679 | 3300042014 | Bacteria | 3538 |
| 181 | Ga0439457_020624 | 3300042014 | Bacteria | 1462 |
| 182 | Ga0450894_002277 | 3300042131 | Bacteria | 2601 |
| 183 | Ga0439434_0003468 | 3300042435 | Bacteria | 4605 |
| 184 | Ga0466972_0000004 | 3300044658 | Bacteria | 314413 |
| 185 | Ga0453683_0021430 | 3300044673 | Bacteria | 4127 |
| 186 | Ga0466970_0001780 | 3300044765 | Bacteria | 10384 |
| 187 | Ga0495650_0017002 | 3300046471 | Bacteria | 3659 |
| 188 | Ga0495633_0000037 | 3300046558 | Bacteria | 184006 |
| 189 | Ga0495668_0000459 | 3300046616 | Bacteria | 52226 |
| 190 | Ga0495668_0004606 | 3300046616 | Bacteria | 9699 |
| 191 | Ga0496109_0048287 | 3300048912 | Bacteria | 3873 |
| 192 | Ga0501298_002061 | 3300049521 | Bacteria | 3013 |
| 193 | Ga0501034_0000474 | 3300049571 | Bacteria | 66190 |
| 194 | Ga0501072_0000424 | 3300049588 | Bacteria | 30227 |
| 195 | Ga0501217_003301 | 3300049661 | Bacteria | 3251 |
| 196 | Ga0501235_003651 | 3300049669 | Bacteria | 3328 |
| 197 | Ga0501243_000019 | 3300049675 | Bacteria | 14232 |
| 198 | Ga0501259_008230 | 3300049688 | Bacteria | 1676 |
| 199 | Ga0501261_003537 | 3300049690 | Bacteria | 1917 |
| 200 | nmdc:mga0k408_20329_c1 | 3300050493 | Bacteria | 3718 |
| 201 | nmdc:mga09592_5207_c1 | 3300050508 | Bacteria | 10567 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300042131 | Ga0450894_002277 | Ga0450894_002277_569_1864 | 391 |
| 2 | 3300009553 | Ga0105249_10044297 | Ga0105249_100442974 | 413 |
| 3 | 3300013306 | Ga0163162_10000437 | Ga0163162_1000043719 | 413 |
| 4 | 3300014968 | Ga0157379_10189237 | Ga0157379_101892372 | 413 |
| 5 | 3300017792 | Ga0163161_10065188 | Ga0163161_100651882 | 413 |
| 6 | 3300013306 | Ga0163162_10169192 | Ga0163162_101691922 | 415 |
| 7 | 3300005327 | Ga0070658_10037838 | Ga0070658_100378383 | 416 |
| 8 | 3300005338 | Ga0068868_100019078 | Ga0068868_1000190781 | 416 |
| 9 | 3300005458 | Ga0070681_10120037 | Ga0070681_101200372 | 416 |
| 10 | 3300005563 | Ga0068855_100018434 | Ga0068855_1000184343 | 416 |
| 11 | 3300005564 | Ga0070664_100235182 | Ga0070664_1002351822 | 416 |
| 12 | 3300005614 | Ga0068856_100029471 | Ga0068856_1000294713 | 416 |
| 13 | 3300009176 | Ga0105242_10223205 | Ga0105242_102232054 | 416 |
| 14 | 3300013105 | Ga0157369_10013715 | Ga0157369_100137155 | 416 |
| 15 | 3300025909 | Ga0207705_10055729 | Ga0207705_100557293 | 416 |
| 16 | 3300025919 | Ga0207657_10009358 | Ga0207657_100093583 | 416 |
| 17 | 3300025933 | Ga0207706_10001829 | Ga0207706_100018298 | 416 |
| 18 | 3300026116 | Ga0207674_10031792 | Ga0207674_100317922 | 416 |
| 19 | 3300026142 | Ga0207698_10161469 | Ga0207698_101614692 | 416 |
| 20 | 3300013105 | Ga0157369_10275324 | Ga0157369_102753242 | 417 |
| 21 | 3300009177 | Ga0105248_10040102 | Ga0105248_100401022 | 418 |
| 22 | 3300009553 | Ga0105249_10077068 | Ga0105249_100770682 | 418 |
| 23 | 3300005616 | Ga0068852_100089828 | Ga0068852_1000898282 | 419 |
| 24 | 3300006237 | Ga0097621_100063250 | Ga0097621_1000632502 | 421 |
| 25 | 3300006847 | Ga0075431_100018153 | Ga0075431_1000181534 | 421 |
| 26 | 3300013297 | Ga0157378_10354559 | Ga0157378_103545591 | 421 |
| 27 | 3300049588 | Ga0501072_0000424 | Ga0501072_0000424_16716_17987 | 423 |
| 28 | iso_pu_bacteria | 2914759650 | 2914760126 | 424 |
| 29 | iso_pu_bacteria | 2958512119 | 2958513414 | 424 |
| 30 | 3300009545 | Ga0105237_10002388 | Ga0105237_1000238813 | 425 |
| 31 | 3300046616 | Ga0495668_0004606 | Ga0495668_0004606_3952_5271 | 425 |
| 32 | 3300013307 | Ga0157372_10110535 | Ga0157372_101105352 | 426 |
| 33 | 3300017792 | Ga0163161_10028518 | Ga0163161_100285183 | 426 |
| 34 | 3300046558 | Ga0495633_0000037 | Ga0495633_0000037_88250_89554 | 426 |
| 35 | 3300005842 | Ga0068858_100177719 | Ga0068858_1001777192 | 429 |
| 36 | 3300026035 | Ga0207703_10063044 | Ga0207703_100630442 | 429 |
| 37 | 3300026075 | Ga0207708_10019863 | Ga0207708_100198631 | 429 |
| 38 | 3300037466 | Ga0395898_0103996 | Ga0395898_0103996_1286_2584 | 429 |
| 39 | 3300046616 | Ga0495668_0000459 | Ga0495668_0000459_32784_34076 | 429 |
| 40 | 3300005295 | Ga0065707_10086349 | Ga0065707_100863494 | 430 |
| 41 | 3300005331 | Ga0070670_100045009 | Ga0070670_1000450093 | 430 |
| 42 | 3300005338 | Ga0068868_100072406 | Ga0068868_1000724062 | 430 |
| 43 | 3300005340 | Ga0070689_100023646 | Ga0070689_1000236463 | 430 |
| 44 | 3300005355 | Ga0070671_100219208 | Ga0070671_1002192081 | 430 |
| 45 | 3300005366 | Ga0070659_100017266 | Ga0070659_1000172663 | 430 |
| 46 | 3300005458 | Ga0070681_10035560 | Ga0070681_100355602 | 430 |
| 47 | 3300005471 | Ga0070698_100001232 | Ga0070698_10000123229 | 430 |
| 48 | 3300005530 | Ga0070679_100337400 | Ga0070679_1003374001 | 430 |
| 49 | 3300005539 | Ga0068853_100063546 | Ga0068853_1000635463 | 430 |
| 50 | 3300005543 | Ga0070672_100101544 | Ga0070672_1001015442 | 430 |
| 51 | 3300005563 | Ga0068855_100094619 | Ga0068855_1000946192 | 430 |
| 52 | 3300005577 | Ga0068857_100170450 | Ga0068857_1001704502 | 430 |
| 53 | 3300005617 | Ga0068859_100039478 | Ga0068859_1000394783 | 430 |
| 54 | 3300005618 | Ga0068864_100018750 | Ga0068864_1000187505 | 430 |
| 55 | 3300005618 | Ga0068864_100063498 | Ga0068864_1000634982 | 430 |
| 56 | 3300005618 | Ga0068864_100073499 | Ga0068864_1000734992 | 430 |
| 57 | 3300005719 | Ga0068861_100108081 | Ga0068861_1001080812 | 430 |
| 58 | 3300005842 | Ga0068858_100031026 | Ga0068858_1000310262 | 430 |
| 59 | 3300005842 | Ga0068858_100070647 | Ga0068858_1000706472 | 430 |
| 60 | 3300005843 | Ga0068860_100022258 | Ga0068860_1000222584 | 430 |
| 61 | 3300005844 | Ga0068862_100082653 | Ga0068862_1000826533 | 430 |
| 62 | 3300006195 | Ga0075366_10015741 | Ga0075366_100157415 | 430 |
| 63 | 3300006931 | Ga0097620_100039478 | Ga0097620_1000394783 | 430 |
| 64 | 3300009553 | Ga0105249_10007916 | Ga0105249_100079163 | 430 |
| 65 | 3300010375 | Ga0105239_10140930 | Ga0105239_101409302 | 430 |
| 66 | 3300013100 | Ga0157373_10104988 | Ga0157373_101049882 | 430 |
| 67 | 3300013105 | Ga0157369_10064626 | Ga0157369_100646263 | 430 |
| 68 | 3300013306 | Ga0163162_10042203 | Ga0163162_100422033 | 430 |
| 69 | 3300013307 | Ga0157372_10319579 | Ga0157372_103195791 | 430 |
| 70 | 3300014325 | Ga0163163_10074795 | Ga0163163_100747952 | 430 |
| 71 | 3300017792 | Ga0163161_10007280 | Ga0163161_100072807 | 430 |
| 72 | 3300025918 | Ga0207662_10172730 | Ga0207662_101727301 | 430 |
| 73 | 3300025920 | Ga0207649_10116165 | Ga0207649_101161652 | 430 |
| 74 | 3300025933 | Ga0207706_10141828 | Ga0207706_101418282 | 430 |
| 75 | 3300025949 | Ga0207667_10136168 | Ga0207667_101361682 | 430 |
| 76 | 3300025981 | Ga0207640_10065199 | Ga0207640_100651992 | 430 |
| 77 | 3300026023 | Ga0207677_10013301 | Ga0207677_100133012 | 430 |
| 78 | 3300026041 | Ga0207639_10119833 | Ga0207639_101198332 | 430 |
| 79 | 3300026088 | Ga0207641_10029173 | Ga0207641_100291733 | 430 |
| 80 | 3300026095 | Ga0207676_10023239 | Ga0207676_100232392 | 430 |
| 81 | 3300026095 | Ga0207676_10099452 | Ga0207676_100994522 | 430 |
| 82 | 3300026116 | Ga0207674_10003052 | Ga0207674_1000305221 | 430 |
| 83 | 3300028381 | Ga0268264_10239992 | Ga0268264_102399922 | 430 |
| 84 | 3300031548 | Ga0307408_100236046 | Ga0307408_1002360461 | 430 |
| 85 | 3300031731 | Ga0307405_10084450 | Ga0307405_100844502 | 430 |
| 86 | 3300031824 | Ga0307413_10000370 | Ga0307413_100003702 | 430 |
| 87 | 3300031824 | Ga0307413_10002070 | Ga0307413_100020705 | 430 |
| 88 | 3300031852 | Ga0307410_10000972 | Ga0307410_100009723 | 430 |
| 89 | 3300031852 | Ga0307410_10003844 | Ga0307410_100038443 | 430 |
| 90 | 3300031903 | Ga0307407_10010410 | Ga0307407_100104102 | 430 |
| 91 | 3300031995 | Ga0307409_100067930 | Ga0307409_1000679302 | 430 |
| 92 | 3300031995 | Ga0307409_100216852 | Ga0307409_1002168522 | 430 |
| 93 | 3300032005 | Ga0307411_10000898 | Ga0307411_100008988 | 430 |
| 94 | 3300032005 | Ga0307411_10048705 | Ga0307411_100487053 | 430 |
| 95 | 3300032126 | Ga0307415_100008104 | Ga0307415_1000081043 | 430 |
| 96 | 3300042014 | Ga0439457_020624 | Ga0439457_020624_108_1403 | 430 |
| 97 | 3300042435 | Ga0439434_0003468 | Ga0439434_0003468_2106_3401 | 430 |
| 98 | 3300048912 | Ga0496109_0048287 | Ga0496109_0048287_245_1537 | 430 |
| 99 | 3300050493 | nmdc:mga0k408_20329_c1 | nmdc:mga0k408_20329_c1_1317_2612 | 430 |
| 100 | 3300005328 | Ga0070676_10045184 | Ga0070676_100451841 | 431 |
| 101 | 3300005330 | Ga0070690_100063971 | Ga0070690_1000639712 | 431 |
| 102 | 3300005353 | Ga0070669_100152476 | Ga0070669_1001524762 | 431 |
| 103 | 3300005354 | Ga0070675_100028751 | Ga0070675_1000287511 | 431 |
| 104 | 3300005367 | Ga0070667_100246526 | Ga0070667_1002465261 | 431 |
| 105 | 3300005456 | Ga0070678_100083404 | Ga0070678_1000834042 | 431 |
| 106 | 3300005459 | Ga0068867_100144379 | Ga0068867_1001443792 | 431 |
| 107 | 3300005617 | Ga0068859_100110562 | Ga0068859_1001105622 | 431 |
| 108 | 3300005719 | Ga0068861_100004878 | Ga0068861_1000048783 | 431 |
| 109 | 3300005843 | Ga0068860_100076081 | Ga0068860_1000760814 | 431 |
| 110 | 3300005843 | Ga0068860_100153311 | Ga0068860_1001533112 | 431 |
| 111 | 3300006237 | Ga0097621_100017635 | Ga0097621_1000176352 | 431 |
| 112 | 3300006237 | Ga0097621_100221408 | Ga0097621_1002214082 | 431 |
| 113 | 3300006931 | Ga0097620_100110566 | Ga0097620_1001105662 | 431 |
| 114 | 3300009101 | Ga0105247_10007772 | Ga0105247_100077721 | 431 |
| 115 | 3300009553 | Ga0105249_10063953 | Ga0105249_100639533 | 431 |
| 116 | 3300010375 | Ga0105239_10205253 | Ga0105239_102052532 | 431 |
| 117 | 3300013104 | Ga0157370_10010558 | Ga0157370_100105584 | 431 |
| 118 | 3300013296 | Ga0157374_10087565 | Ga0157374_100875652 | 431 |
| 119 | 3300013297 | Ga0157378_10008458 | Ga0157378_100084582 | 431 |
| 120 | 3300013306 | Ga0163162_10095617 | Ga0163162_100956172 | 431 |
| 121 | 3300013307 | Ga0157372_10011459 | Ga0157372_100114593 | 431 |
| 122 | 3300013308 | Ga0157375_10009549 | Ga0157375_100095493 | 431 |
| 123 | 3300025900 | Ga0207710_10001046 | Ga0207710_100010463 | 431 |
| 124 | 3300025904 | Ga0207647_10007406 | Ga0207647_100074068 | 431 |
| 125 | 3300025907 | Ga0207645_10041892 | Ga0207645_100418921 | 431 |
| 126 | 3300025907 | Ga0207645_10118687 | Ga0207645_101186871 | 431 |
| 127 | 3300025931 | Ga0207644_10121984 | Ga0207644_101219841 | 431 |
| 128 | 3300025932 | Ga0207690_10013661 | Ga0207690_100136613 | 431 |
| 129 | 3300025940 | Ga0207691_10143019 | Ga0207691_101430192 | 431 |
| 130 | 3300025986 | Ga0207658_10216394 | Ga0207658_102163941 | 431 |
| 131 | 3300026023 | Ga0207677_10141024 | Ga0207677_101410242 | 431 |
| 132 | 3300026089 | Ga0207648_10009064 | Ga0207648_100090645 | 431 |
| 133 | 3300026118 | Ga0207675_100019361 | Ga0207675_1000193615 | 431 |
| 134 | 3300026121 | Ga0207683_10020060 | Ga0207683_100200602 | 431 |
| 135 | 3300028381 | Ga0268264_10017151 | Ga0268264_100171513 | 431 |
| 136 | 3300031251 | Ga0265327_10015202 | Ga0265327_100152024 | 431 |
| 137 | 3300039437 | Ga0436365_1762313 | Ga0436365_1762313_447_1751 | 431 |
| 138 | 3300044658 | Ga0466972_0000004 | Ga0466972_0000004_310238_311533 | 431 |
| 139 | 3300044765 | Ga0466970_0001780 | Ga0466970_0001780_6311_7606 | 431 |
| 140 | 3300049571 | Ga0501034_0000474 | Ga0501034_0000474_5883_7178 | 431 |
| 141 | 3300005327 | Ga0070658_10067185 | Ga0070658_100671852 | 432 |
| 142 | 3300005331 | Ga0070670_100006973 | Ga0070670_1000069732 | 432 |
| 143 | 3300005331 | Ga0070670_100103447 | Ga0070670_1001034471 | 432 |
| 144 | 3300005334 | Ga0068869_100042592 | Ga0068869_1000425922 | 432 |
| 145 | 3300005340 | Ga0070689_100042489 | Ga0070689_1000424892 | 432 |
| 146 | 3300005347 | Ga0070668_100002932 | Ga0070668_1000029323 | 432 |
| 147 | 3300005347 | Ga0070668_100062920 | Ga0070668_1000629202 | 432 |
| 148 | 3300005353 | Ga0070669_100003052 | Ga0070669_10000305211 | 432 |
| 149 | 3300005365 | Ga0070688_100001211 | Ga0070688_1000012115 | 432 |
| 150 | 3300005365 | Ga0070688_100079073 | Ga0070688_1000790732 | 432 |
| 151 | 3300005471 | Ga0070698_100001401 | Ga0070698_10000140114 | 432 |
| 152 | 3300005471 | Ga0070698_100037335 | Ga0070698_1000373353 | 432 |
| 153 | 3300005535 | Ga0070684_100238366 | Ga0070684_1002383662 | 432 |
| 154 | 3300005543 | Ga0070672_100030071 | Ga0070672_1000300711 | 432 |
| 155 | 3300005617 | Ga0068859_100006400 | Ga0068859_1000064003 | 432 |
| 156 | 3300005718 | Ga0068866_10020257 | Ga0068866_100202572 | 432 |
| 157 | 3300005719 | Ga0068861_100001430 | Ga0068861_1000014301 | 432 |
| 158 | 3300005719 | Ga0068861_100031160 | Ga0068861_1000311602 | 432 |
| 159 | 3300005843 | Ga0068860_100193451 | Ga0068860_1001934512 | 432 |
| 160 | 3300005844 | Ga0068862_100014331 | Ga0068862_1000143312 | 432 |
| 161 | 3300005844 | Ga0068862_100048908 | Ga0068862_1000489083 | 432 |
| 162 | 3300005985 | Ga0081539_10000042 | Ga0081539_10000042239 | 432 |
| 163 | 3300006844 | Ga0075428_100001125 | Ga0075428_10000112516 | 432 |
| 164 | 3300006880 | Ga0075429_100000105 | Ga0075429_10000010536 | 432 |
| 165 | 3300006931 | Ga0097620_100006400 | Ga0097620_1000064004 | 432 |
| 166 | 3300009093 | Ga0105240_10002165 | Ga0105240_1000216515 | 432 |
| 167 | 3300009094 | Ga0111539_10026511 | Ga0111539_100265114 | 432 |
| 168 | 3300009094 | Ga0111539_10123030 | Ga0111539_101230301 | 432 |
| 169 | 3300009553 | Ga0105249_10054874 | Ga0105249_100548743 | 432 |
| 170 | 3300013102 | Ga0157371_10006479 | Ga0157371_100064794 | 432 |
| 171 | 3300013102 | Ga0157371_10163509 | Ga0157371_101635091 | 432 |
| 172 | 3300013306 | Ga0163162_10063114 | Ga0163162_100631143 | 432 |
| 173 | 3300013307 | Ga0157372_10056404 | Ga0157372_100564042 | 432 |
| 174 | 3300013308 | Ga0157375_10045272 | Ga0157375_100452723 | 432 |
| 175 | 3300014325 | Ga0163163_10008831 | Ga0163163_100088316 | 432 |
| 176 | 3300014326 | Ga0157380_10001077 | Ga0157380_1000107714 | 432 |
| 177 | 3300014745 | Ga0157377_10000492 | Ga0157377_1000049212 | 432 |
| 178 | 3300025909 | Ga0207705_10132043 | Ga0207705_101320432 | 432 |
| 179 | 3300025913 | Ga0207695_10000962 | Ga0207695_1000096225 | 432 |
| 180 | 3300025925 | Ga0207650_10006263 | Ga0207650_100062635 | 432 |
| 181 | 3300025926 | Ga0207659_10108999 | Ga0207659_101089991 | 432 |
| 182 | 3300025933 | Ga0207706_10047415 | Ga0207706_100474154 | 432 |
| 183 | 3300025940 | Ga0207691_10057319 | Ga0207691_100573192 | 432 |
| 184 | 3300025942 | Ga0207689_10023470 | Ga0207689_100234702 | 432 |
| 185 | 3300026116 | Ga0207674_10049524 | Ga0207674_100495243 | 432 |
| 186 | 3300026118 | Ga0207675_100005089 | Ga0207675_1000050892 | 432 |
| 187 | 3300026118 | Ga0207675_100022500 | Ga0207675_1000225002 | 432 |
| 188 | 3300028380 | Ga0268265_10033734 | Ga0268265_100337343 | 432 |
| 189 | 3300033180 | Ga0307510_10000119 | Ga0307510_1000011952 | 432 |
| 190 | 3300041999 | Ga0439433_0003047 | Ga0439433_0003047_866_2167 | 432 |
| 191 | 3300042014 | Ga0439457_004679 | Ga0439457_004679_400_1701 | 432 |
| 192 | 3300044673 | Ga0453683_0021430 | Ga0453683_0021430_514_1818 | 432 |
| 193 | 3300046471 | Ga0495650_0017002 | Ga0495650_0017002_1932_3239 | 432 |
| 194 | 3300049521 | Ga0501298_002061 | Ga0501298_002061_1410_2717 | 432 |
| 195 | 3300049661 | Ga0501217_003301 | Ga0501217_003301_1500_2807 | 432 |
| 196 | 3300049669 | Ga0501235_003651 | Ga0501235_003651_790_2097 | 432 |
| 197 | 3300049675 | Ga0501243_000019 | Ga0501243_000019_6407_7714 | 432 |
| 198 | 3300049688 | Ga0501259_008230 | Ga0501259_008230_314_1621 | 432 |
| 199 | 3300049690 | Ga0501261_003537 | Ga0501261_003537_550_1857 | 432 |
| 200 | 3300050508 | nmdc:mga09592_5207_c1 | nmdc:mga09592_5207_c1_3663_4964 | 432 |
| 201 | 3300031251 | Ga0265327_10000152 | Ga0265327_1000015238 | 457 |
| 202 | 3300003322 | rootL2_10206117 | rootL2_102061173 | 469 |
| 203 | 3300003322 | rootL2_10203763 | rootL2_102037635 | 470 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1vb3-assembly1.cif.gz_A | crystal structure of threonine synthase from escherichia coli | 0.9303 | 39 | 470 |
| 1vb3-assembly1.cif.gz_A | crystal structure of threonine synthase from escherichia coli | 0.9282 | 39 | 470 |
| 4f4f-assembly2.cif.gz_B | x-ray crystal structure of plp bound threonine synthase from brucella melitensis | 0.923 | 39 | 467 |
| 1kl7-assembly2.cif.gz_B | crystal structure of threonine synthase from yeast | 0.9061 | 37 | 468 |
| 3v7n-assembly1.cif.gz_A | crystal structure of threonine synthase (thrc) from from burkholderia thailandensis | 0.883 | 41 | 466 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4f4fB03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9433 | 141 | 254 | 3.40.50.1100 |
| 4f4fB01 | Alpha Beta;Alpha-Beta Complex;threonine synthase, domain 1, chain A;Threonine synthase, N-terminal domain | 0.9299 | 39 | 119 | 3.90.1380.10 |
| 1vb3A02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9171 | 255 | 436 | 3.40.50.1100 |
| af_Q42598_1_91_3.90.1380.10 | Alpha Beta;Alpha-Beta Complex;threonine synthase, domain 1, chain A;Threonine synthase, N-terminal domain | 0.8979 | 35 | 119 | 3.90.1380.10 |
| 1vb3A03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.8954 | 141 | 256 | 3.40.50.1100 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2W7S8R4-F1-model_v4 | Threonine synthase (EC 4.2.3.1) | 0.9936 | 39 | 470 |
GO:0004795
GO:0009088 GO:0030170 |
| AF-A0A4Q3RMR0-F1-model_v4 | Threonine synthase | 0.9928 | 39 | 147 |
|
| AF-A0A2M9B4C5-F1-model_v4 | Threonine synthase (EC 4.2.3.1) | 0.9918 | 39 | 467 |
GO:0004795
GO:0009088 GO:0030170 |
| AF-A0A2W7S8R4-F1-model_v4 | Threonine synthase (EC 4.2.3.1) | 0.9913 | 39 | 470 |
GO:0004795
GO:0009088 GO:0030170 |
| AF-A0A1M3E0L5-F1-model_v4 | Threonine synthase (EC 4.2.3.1) | 0.9899 | 39 | 468 |
GO:0004795
GO:0009088 |
Predicted Structure (AlphaFold2)
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