F309682

General Info

Members Datasets Scaffolds Average Seq Length
202 138 175 218

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10231082|Ga0075364_102310822
Length 233
Sequence MSDAIRVVVADDQALVRTGFRMILTADDIDVVAEASTGNEAIDAVRRTRPDVVLMDIRMPGLDGIEATRQIVADDDLAEVKVVVVTTFELDEYVVDAIRAGAAGFLVKHTEPAELLRAVRVIAAGDALLSPSVTRTLISRFTDRTEGATGSTAGAGNGANAVDPVVLASLTEREREAVVLVAQGRSNDEIAAEWVVSPATVRTHVSRAMTKLHARDRAQLVVIAYQSGLADPA

Samples

Sample ID Description Type Environment
1 2643221549 Agromyces sp. Root1464 Isolate Unclassified
2 2643221575 Microbacterium sp. Root61 Isolate Unclassified
3 2643221597 Microbacterium sp. Root180 Isolate Unclassified
4 2643221619 Agromyces sp. Root81 Isolate Unclassified
5 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
6 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
7 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
8 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
9 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
10 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
11 2808606372 Agromyces sp. 23-23 Isolate Unclassified
12 2808606394 Promicromonospora sp. C35 Isolate Unclassified
13 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
14 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
15 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
16 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
17 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
18 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
19 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
20 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
21 2928153084 Leifsonia sp. 563 Isolate Unclassified
22 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
23 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
24 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
25 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
26 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
27 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
28 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
66 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
67 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
68 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
82 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
83 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
84 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
93 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
94 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
95 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
100 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
106 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
107 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
108 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
109 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
110 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
134 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
135 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
136 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
137 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
138 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.64
Metatranscriptomes 0.99
Isolates 13.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.42
Nodule 0
Rhizoplane 8.42
Rhizosphere 69.31
Stem 0
Stem Tuber 0
Unclassified 13.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10102021 3300001990 Bacteria 850
2 JGI24735J21928_10012644 3300002067 Bacteria 2667
3 JGI25406J46586_10031664 3300003203 Bacteria 1975
4 Ga0055539_1010012 3300003752 Bacteria 1175
5 Ga0070658_10000122 3300005327 Bacteria 69245
6 Ga0070658_10169207 3300005327 Bacteria 1835
7 Ga0070660_100389527 3300005339 Bacteria 1151
8 Ga0070659_100122002 3300005366 Bacteria 2112
9 Ga0070663_100155471 3300005455 Bacteria 1757
10 Ga0068855_100222308 3300005563 Bacteria 2117
11 Ga0081455_10001135 3300005937 Bacteria 33309
12 Ga0081539_10001471 3300005985 Bacteria 39947
13 Ga0075365_10000830 3300006038 Bacteria 12780
14 Ga0075363_100145291 3300006048 Bacteria 1337
15 Ga0075364_10231082 3300006051 Bacteria 1256
16 Ga0075364_10510140 3300006051 Bacteria 822
17 Ga0075367_10014504 3300006178 Bacteria 4267
18 Ga0075370_10036124 3300006353 Bacteria 2774
19 Ga0105243_10400067 3300009148 Bacteria 1275
20 Ga0157371_10000825 3300013102 Bacteria 35495
21 Ga0157370_10011936 3300013104 Bacteria 9056
22 Ga0171462_1003 3300013250 Bacteria 853796
23 Ga0163162_10272890 3300013306 Bacteria 1823
24 Ga0157372_10186048 3300013307 Bacteria 2405
25 Ga0163163_10565313 3300014325 Bacteria 1200
26 Ga0157380_10462620 3300014326 Bacteria 1221
27 Ga0206354_11081658 3300020081 Bacteria 1537
28 Ga0206353_10850066 3300020082 Bacteria 14599
29 Ga0209563_100220 3300025230 Bacteria 28430
30 Ga0209677_100901 3300025253 Bacteria 14541
31 Ga0207656_10275013 3300025321 Bacteria 829
32 Ga0207688_10035766 3300025901 Bacteria 2751
33 Ga0207647_10025847 3300025904 Bacteria 3849
34 Ga0207647_10299900 3300025904 Bacteria 915
35 Ga0207705_10000006 3300025909 Bacteria 657147
36 Ga0207705_10372113 3300025909 Bacteria 1103
37 Ga0207657_10065854 3300025919 Bacteria 3087
38 Ga0207657_10108039 3300025919 Bacteria 2300
39 Ga0207690_10086420 3300025932 Bacteria 2204
40 Ga0207670_10342522 3300025936 Bacteria 1182
41 Ga0207667_10160933 3300025949 Bacteria 2309
42 Ga0207667_10831317 3300025949 Bacteria 919
43 Ga0207639_10409190 3300026041 Bacteria 1224
44 Ga0207702_10180906 3300026078 Bacteria 1942
45 Ga0207674_10594025 3300026116 Bacteria 1069
46 Ga0307517_10282935 3300028786 Bacteria 944
47 Ga0316177_1034687 3300030731 Bacteria 1171
48 Ga0316176_1110655 3300030732 Bacteria 2670
49 Ga0316179_1061780 3300030734 Bacteria 2074
50 Ga0307408_100397380 3300031548 Bacteria 1183
51 Ga0307408_100407533 3300031548 Bacteria 1169
52 Ga0307406_10042859 3300031901 Bacteria 2828
53 Ga0307406_10063590 3300031901 Bacteria 2391
54 Ga0307406_10554673 3300031901 Bacteria 941
55 Ga0307407_10470485 3300031903 Bacteria 916
56 Ga0307412_10564976 3300031911 Bacteria 958
57 Ga0307416_100125331 3300032002 Bacteria 2300
58 Ga0307416_101131167 3300032002 Bacteria 888
59 Ga0307416_101170348 3300032002 Bacteria 874
60 Ga0307411_10196035 3300032005 Bacteria 1547
61 Ga0307415_100401848 3300032126 Bacteria 1170
62 Ga0395899_0005974 3300037312 Bacteria 9455
63 Ga0395900_0325092 3300037418 Bacteria 1517
64 Ga0395898_0580087 3300037466 Bacteria 1064
65 Ga0395901_0441236 3300038443 Bacteria 1332
66 Ga0395901_0613734 3300038443 Bacteria 1095
67 Ga0436363_1298545 3300039450 Bacteria 2230
68 Ga0439465_0061604 3300041413 Bacteria 1244
69 Ga0439431_0023744 3300041997 Bacteria 1487
70 Ga0466972_0064754 3300044658 Bacteria 1749
71 Ga0466965_0000007 3300044683 Bacteria 131940
72 Ga0466965_0080568 3300044683 Bacteria 1645
73 Ga0466965_0081356 3300044683 Bacteria 1638
74 Ga0466965_0298520 3300044683 Bacteria 873
75 Ga0466961_0125082 3300044693 Bacteria 1613
76 Ga0466961_0193562 3300044693 Bacteria 1260
77 Ga0466970_0000103 3300044765 Bacteria 37060
78 Ga0466970_0118756 3300044765 Bacteria 1447
79 Ga0466970_0369656 3300044765 Bacteria 815
80 Ga0466957_0321879 3300044842 Bacteria 1044
81 Ga0466960_0007945 3300044901 Bacteria 4331
82 Ga0466960_0015524 3300044901 Bacteria 3284
83 Ga0466960_0084019 3300044901 Bacteria 1610
84 Ga0466959_0006502 3300045049 Bacteria 8101
85 Ga0466959_0240025 3300045049 Bacteria 1252
86 Ga0495631_0137768 3300046518 Bacteria 1048
87 Ga0495645_0041562 3300046543 Bacteria 3352
88 Ga0495656_0069996 3300046615 Bacteria 1556
89 Ga0495686_0117366 3300047472 Bacteria 1590
90 Ga0496101_0075932 3300048904 Bacteria 2474
91 Ga0496103_0085664 3300048906 Bacteria 1986
92 Ga0496105_0249104 3300048908 Bacteria 1439
93 Ga0496105_0518823 3300048908 Bacteria 933
94 Ga0496107_0052228 3300048910 Bacteria 2948
95 Ga0496109_0099132 3300048912 Bacteria 2702
96 Ga0496109_0328174 3300048912 Bacteria 1444
97 Ga0496110_0070178 3300048913 Bacteria 3104
98 Ga0496110_0144155 3300048913 Bacteria 2154
99 Ga0496111_0006270 3300048914 Bacteria 7711
100 Ga0496112_0196717 3300048915 Bacteria 1976
101 Ga0496113_0101531 3300048916 Bacteria 2230
102 Ga0496114_0021578 3300048917 Bacteria 5240
103 Ga0496114_0203097 3300048917 Bacteria 1736
104 Ga0496114_0507606 3300048917 Bacteria 1066
105 Ga0496115_0026181 3300048918 Bacteria 4550
106 Ga0496115_0082044 3300048918 Bacteria 2626
107 Ga0496117_0000620 3300048920 Bacteria 57459
108 Ga0496117_0004991 3300048920 Bacteria 14231
109 Ga0496117_0068852 3300048920 Bacteria 2387
110 Ga0496117_0372273 3300048920 Bacteria 730
111 Ga0496119_0000341 3300048922 Bacteria 65282
112 Ga0496120_0083056 3300048923 Bacteria 1730
113 Ga0496121_0000277 3300048924 Bacteria 107014
114 Ga0496122_0169522 3300048925 Bacteria 1318
115 Ga0496124_0641069 3300048927 Bacteria 684
116 Ga0496126_0003466 3300048929 Bacteria 19901
117 Ga0501031_0032995 3300049568 Bacteria 3376
118 Ga0501032_0038368 3300049569 Bacteria 3263
119 Ga0501032_0132951 3300049569 Bacteria 1640
120 Ga0501033_0040657 3300049570 Bacteria 3471
121 Ga0501033_0045006 3300049570 Bacteria 3285
122 Ga0501033_0086743 3300049570 Bacteria 2291
123 Ga0501033_0153110 3300049570 Bacteria 1662
124 Ga0501034_0026344 3300049571 Bacteria 5922
125 Ga0501034_0034998 3300049571 Bacteria 5093
126 Ga0501034_0067922 3300049571 Bacteria 3576
127 Ga0501034_0202922 3300049571 Bacteria 1940
128 Ga0501034_0255875 3300049571 Bacteria 1695
129 Ga0501034_0530961 3300049571 Bacteria 1087
130 Ga0501034_0568586 3300049571 Bacteria 1042
131 Ga0501034_0940398 3300049571 Bacteria 751
132 Ga0501037_0013898 3300049573 Bacteria 5931
133 Ga0501037_0030379 3300049573 Bacteria 3993
134 Ga0501037_0139001 3300049573 Bacteria 1739
135 Ga0501037_0227468 3300049573 Bacteria 1310
136 Ga0501037_0367497 3300049573 Bacteria 990
137 Ga0501038_0021577 3300049574 Bacteria 5779
138 Ga0501038_0021888 3300049574 Bacteria 5735
139 Ga0501038_0034116 3300049574 Bacteria 4476
140 Ga0501038_0146548 3300049574 Bacteria 1927
141 Ga0501038_0173334 3300049574 Bacteria 1745
142 Ga0501038_0263986 3300049574 Bacteria 1360
143 Ga0501039_0459811 3300049575 Bacteria 999
144 Ga0501039_0462941 3300049575 Bacteria 996
145 Ga0501042_0008267 3300049578 Bacteria 6860
146 Ga0501043_0015291 3300049579 Bacteria 6011
147 Ga0501043_0066153 3300049579 Bacteria 2838
148 Ga0501043_0114143 3300049579 Bacteria 2121
149 Ga0501046_0015278 3300049580 Bacteria 6456
150 Ga0501046_0194562 3300049580 Bacteria 1511
151 Ga0501047_0016709 3300049581 Bacteria 7010
152 Ga0501047_0018872 3300049581 Bacteria 6614
153 Ga0501047_0023647 3300049581 Bacteria 5899
154 Ga0501047_0348389 3300049581 Bacteria 1318
155 Ga0501048_0133948 3300049582 Bacteria 1751
156 Ga0501070_0002705 3300049586 Bacteria 15477
157 Ga0501070_0232598 3300049586 Bacteria 1510
158 Ga0501070_0246677 3300049586 Bacteria 1461
159 Ga0501073_0198048 3300049589 Bacteria 1389
160 Ga0501080_0090306 3300049742 Bacteria 2846
161 Ga0501035_0000926 3300049822 Bacteria 31067
162 Ga0501035_0069983 3300049822 Bacteria 3109
163 Ga0501035_0406664 3300049822 Bacteria 1132
164 Ga0501044_0015603 3300049823 Bacteria 8183
165 Ga0501044_0026604 3300049823 Bacteria 6123
166 Ga0501044_0085680 3300049823 Bacteria 3183
167 Ga0501045_0159947 3300049824 Bacteria 1676
168 nmdc:mga03n38_110964_c1 3300050490 Bacteria 1335
169 nmdc:mga00v17_374308_c1 3300050491 Bacteria 926
170 nmdc:mga0yw44_157658_c1 3300050492 Bacteria 1484
171 nmdc:mga0yw44_187091_c1 3300050492 Bacteria 1365
172 nmdc:mga06z11_60195_c1 3300050494 Bacteria 1976
173 nmdc:mga04h51_66015_c1 3300050495 Bacteria 1252
174 nmdc:mga07m45_437099_c1 3300050496 Bacteria 759
175 Ga0500616_0000968 3300053153 Bacteria 31105

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300030731 Ga0316177_1034687 Ga0316177_10346871 196
2 3300030732 Ga0316176_1110655 Ga0316176_11106552 196
3 3300030734 Ga0316179_1061780 Ga0316179_10617802 196
4 3300031903 Ga0307407_10470485 Ga0307407_104704852 196
5 3300044765 Ga0466970_0369656 Ga0466970_0369656_71_736 198
6 3300006051 Ga0075364_10510140 Ga0075364_105101401 203
7 3300050491 nmdc:mga00v17_374308_c1 nmdc:mga00v17_374308_c1_217_894 203
8 3300003203 JGI25406J46586_10031664 JGI25406J46586_100316642 204
9 3300005985 Ga0081539_10001471 Ga0081539_1000147118 204
10 3300048904 Ga0496101_0075932 Ga0496101_0075932_1037_1690 205
11 3300048906 Ga0496103_0085664 Ga0496103_0085664_889_1542 205
12 3300048908 Ga0496105_0249104 Ga0496105_0249104_468_1121 205
13 3300048910 Ga0496107_0052228 Ga0496107_0052228_31_684 205
14 3300048912 Ga0496109_0328174 Ga0496109_0328174_14_667 205
15 3300048913 Ga0496110_0144155 Ga0496110_0144155_1141_1794 205
16 3300048914 Ga0496111_0006270 Ga0496111_0006270_1577_2230 205
17 3300048915 Ga0496112_0196717 Ga0496112_0196717_574_1227 205
18 3300048917 Ga0496114_0507606 Ga0496114_0507606_330_983 205
19 3300048918 Ga0496115_0082044 Ga0496115_0082044_204_857 205
20 3300031901 Ga0307406_10063590 Ga0307406_100635903 207
21 3300031901 Ga0307406_10554673 Ga0307406_105546731 207
22 3300031911 Ga0307412_10564976 Ga0307412_105649762 207
23 3300032002 Ga0307416_100125331 Ga0307416_1001253313 207
24 3300013306 Ga0163162_10272890 Ga0163162_102728902 208
25 3300025901 Ga0207688_10035766 Ga0207688_100357663 209
26 3300025936 Ga0207670_10342522 Ga0207670_103425222 209
27 3300031901 Ga0307406_10042859 Ga0307406_100428593 210
28 3300046543 Ga0495645_0041562 Ga0495645_0041562_12_674 212
29 3300048923 Ga0496120_0083056 Ga0496120_0083056_639_1304 212
30 3300039450 Ga0436363_1298545 Ga0436363_1298545_117_779 213
31 iso_pu_bacteria 2643221597 2643995624 213
32 3300005937 Ga0081455_10001135 Ga0081455_1000113522 214
33 3300006178 Ga0075367_10014504 Ga0075367_100145043 214
34 3300049581 Ga0501047_0348389 Ga0501047_0348389_336_983 215
35 iso_pu_bacteria 2857729791 2857732362 215
36 iso_pu_bacteria 2995463766 2995468095 215
37 3300049574 Ga0501038_0021888 Ga0501038_0021888_1701_2351 216
38 iso_pu_bacteria 2643221549 2643769482 216
39 iso_pu_bacteria 2643221575 2643885124 216
40 iso_pu_bacteria 2643221619 2644114100 216
41 iso_pu_bacteria 2738541272 2738694482 216
42 iso_pu_bacteria 2738543027 2739323960 216
43 iso_pu_bacteria 2739367654 2739606871 216
44 iso_pu_bacteria 2758568522 2760305242 216
45 iso_pu_bacteria 2758568621 2760620945 216
46 iso_pu_bacteria 2808606372 2808902755 216
47 iso_pu_bacteria 2808606394 2809025737 216
48 iso_pu_bacteria 2811994872 2812322850 216
49 iso_pu_bacteria 2833709550 2833710675 216
50 iso_pu_bacteria 2844841374 2844842378 216
51 iso_pu_bacteria 2844852863 2844856159 216
52 iso_pu_bacteria 2862993130 2862996739 216
53 iso_pu_bacteria 2919055335 2919058026 216
54 iso_pu_bacteria 2919443155 2919443331 216
55 iso_pu_bacteria 2928153084 2928155960 216
56 iso_pu_bacteria 2939660829 2939663520 216
57 iso_pu_bacteria 2946041624 2946042711 216
58 iso_pu_bacteria 8045830549 8045830902 216
59 iso_pu_bacteria 8056579771 8056580171 216
60 3300006051 Ga0075364_10231082 Ga0075364_102310822 217
61 3300013250 Ga0171462_1003 Ga0171462_1003676 217
62 3300048922 Ga0496119_0000341 Ga0496119_0000341_13731_14384 217
63 3300048925 Ga0496122_0169522 Ga0496122_0169522_598_1251 217
64 3300048927 Ga0496124_0641069 Ga0496124_0641069_19_672 217
65 3300049586 Ga0501070_0002705 Ga0501070_0002705_6924_7577 217
66 3300006048 Ga0075363_100145291 Ga0075363_1001452912 218
67 3300050490 nmdc:mga03n38_110964_c1 nmdc:mga03n38_110964_c1_510_1205 218
68 3300050492 nmdc:mga0yw44_157658_c1 nmdc:mga0yw44_157658_c1_751_1419 218
69 3300050494 nmdc:mga06z11_60195_c1 nmdc:mga06z11_60195_c1_440_1135 218
70 3300032002 Ga0307416_101131167 Ga0307416_1011311671 219
71 3300048920 Ga0496117_0068852 Ga0496117_0068852_417_1079 219
72 3300048920 Ga0496117_0372273 Ga0496117_0372273_21_680 219
73 3300049571 Ga0501034_0255875 Ga0501034_0255875_652_1314 219
74 3300049573 Ga0501037_0030379 Ga0501037_0030379_155_817 219
75 3300049581 Ga0501047_0018872 Ga0501047_0018872_260_922 219
76 3300049586 Ga0501070_0232598 Ga0501070_0232598_318_980 219
77 3300049822 Ga0501035_0000926 Ga0501035_0000926_4037_4699 219
78 3300049823 Ga0501044_0085680 Ga0501044_0085680_2421_3083 219
79 3300001990 JGI24737J22298_10102021 JGI24737J22298_101020211 220
80 3300002067 JGI24735J21928_10012644 JGI24735J21928_100126442 220
81 3300003752 Ga0055539_1010012 Ga0055539_10100122 220
82 3300005327 Ga0070658_10000122 Ga0070658_1000012244 220
83 3300005327 Ga0070658_10169207 Ga0070658_101692072 220
84 3300005339 Ga0070660_100389527 Ga0070660_1003895272 220
85 3300005366 Ga0070659_100122002 Ga0070659_1001220022 220
86 3300005455 Ga0070663_100155471 Ga0070663_1001554712 220
87 3300005563 Ga0068855_100222308 Ga0068855_1002223082 220
88 3300006038 Ga0075365_10000830 Ga0075365_1000083010 220
89 3300006353 Ga0075370_10036124 Ga0075370_100361243 220
90 3300009148 Ga0105243_10400067 Ga0105243_104000672 220
91 3300013102 Ga0157371_10000825 Ga0157371_1000082522 220
92 3300013104 Ga0157370_10011936 Ga0157370_1001193612 220
93 3300013307 Ga0157372_10186048 Ga0157372_101860482 220
94 3300014325 Ga0163163_10565313 Ga0163163_105653132 220
95 3300014326 Ga0157380_10462620 Ga0157380_104626202 220
96 3300020081 Ga0206354_11081658 Ga0206354_110816582 220
97 3300020082 Ga0206353_10850066 Ga0206353_108500667 220
98 3300025230 Ga0209563_100220 Ga0209563_10022025 220
99 3300025253 Ga0209677_100901 Ga0209677_10090111 220
100 3300025321 Ga0207656_10275013 Ga0207656_102750131 220
101 3300025904 Ga0207647_10025847 Ga0207647_100258472 220
102 3300025904 Ga0207647_10299900 Ga0207647_102999002 220
103 3300025909 Ga0207705_10000006 Ga0207705_10000006238 220
104 3300025909 Ga0207705_10372113 Ga0207705_103721132 220
105 3300025919 Ga0207657_10065854 Ga0207657_100658543 220
106 3300025919 Ga0207657_10108039 Ga0207657_101080393 220
107 3300025932 Ga0207690_10086420 Ga0207690_100864202 220
108 3300025949 Ga0207667_10160933 Ga0207667_101609333 220
109 3300025949 Ga0207667_10831317 Ga0207667_108313171 220
110 3300026041 Ga0207639_10409190 Ga0207639_104091901 220
111 3300026078 Ga0207702_10180906 Ga0207702_101809062 220
112 3300026116 Ga0207674_10594025 Ga0207674_105940252 220
113 3300028786 Ga0307517_10282935 Ga0307517_102829351 220
114 3300031548 Ga0307408_100397380 Ga0307408_1003973802 220
115 3300031548 Ga0307408_100407533 Ga0307408_1004075331 220
116 3300032002 Ga0307416_101170348 Ga0307416_1011703481 220
117 3300032005 Ga0307411_10196035 Ga0307411_101960352 220
118 3300032126 Ga0307415_100401848 Ga0307415_1004018482 220
119 3300037312 Ga0395899_0005974 Ga0395899_0005974_3804_4466 220
120 3300037418 Ga0395900_0325092 Ga0395900_0325092_840_1502 220
121 3300037466 Ga0395898_0580087 Ga0395898_0580087_277_939 220
122 3300038443 Ga0395901_0441236 Ga0395901_0441236_221_889 220
123 3300038443 Ga0395901_0613734 Ga0395901_0613734_159_821 220
124 3300041413 Ga0439465_0061604 Ga0439465_0061604_162_824 220
125 3300041997 Ga0439431_0023744 Ga0439431_0023744_124_798 220
126 3300044658 Ga0466972_0064754 Ga0466972_0064754_156_818 220
127 3300044683 Ga0466965_0000007 Ga0466965_0000007_87356_88027 220
128 3300044683 Ga0466965_0080568 Ga0466965_0080568_512_1174 220
129 3300044683 Ga0466965_0081356 Ga0466965_0081356_363_1031 220
130 3300044683 Ga0466965_0298520 Ga0466965_0298520_167_829 220
131 3300044693 Ga0466961_0125082 Ga0466961_0125082_20_682 220
132 3300044693 Ga0466961_0193562 Ga0466961_0193562_123_785 220
133 3300044765 Ga0466970_0000103 Ga0466970_0000103_254_931 220
134 3300044765 Ga0466970_0118756 Ga0466970_0118756_416_1078 220
135 3300044842 Ga0466957_0321879 Ga0466957_0321879_112_774 220
136 3300044901 Ga0466960_0007945 Ga0466960_0007945_429_1091 220
137 3300044901 Ga0466960_0015524 Ga0466960_0015524_2055_2720 220
138 3300044901 Ga0466960_0084019 Ga0466960_0084019_688_1350 220
139 3300045049 Ga0466959_0006502 Ga0466959_0006502_5408_6070 220
140 3300045049 Ga0466959_0240025 Ga0466959_0240025_266_928 220
141 3300046518 Ga0495631_0137768 Ga0495631_0137768_156_836 220
142 3300046615 Ga0495656_0069996 Ga0495656_0069996_451_1116 220
143 3300047472 Ga0495686_0117366 Ga0495686_0117366_332_994 220
144 3300048908 Ga0496105_0518823 Ga0496105_0518823_138_800 220
145 3300048912 Ga0496109_0099132 Ga0496109_0099132_1879_2544 220
146 3300048913 Ga0496110_0070178 Ga0496110_0070178_960_1661 220
147 3300048916 Ga0496113_0101531 Ga0496113_0101531_117_782 220
148 3300048917 Ga0496114_0021578 Ga0496114_0021578_2690_3352 220
149 3300048917 Ga0496114_0203097 Ga0496114_0203097_277_942 220
150 3300048918 Ga0496115_0026181 Ga0496115_0026181_3639_4304 220
151 3300048920 Ga0496117_0000620 Ga0496117_0000620_56207_56869 220
152 3300048920 Ga0496117_0004991 Ga0496117_0004991_3336_3998 220
153 3300048924 Ga0496121_0000277 Ga0496121_0000277_45208_45879 220
154 3300048929 Ga0496126_0003466 Ga0496126_0003466_6230_6892 220
155 3300049568 Ga0501031_0032995 Ga0501031_0032995_2510_3172 220
156 3300049569 Ga0501032_0038368 Ga0501032_0038368_2530_3201 220
157 3300049569 Ga0501032_0132951 Ga0501032_0132951_471_1133 220
158 3300049570 Ga0501033_0040657 Ga0501033_0040657_409_1071 220
159 3300049570 Ga0501033_0045006 Ga0501033_0045006_25_687 220
160 3300049570 Ga0501033_0086743 Ga0501033_0086743_850_1521 220
161 3300049570 Ga0501033_0153110 Ga0501033_0153110_230_892 220
162 3300049571 Ga0501034_0026344 Ga0501034_0026344_3946_4608 220
163 3300049571 Ga0501034_0034998 Ga0501034_0034998_1642_2304 220
164 3300049571 Ga0501034_0067922 Ga0501034_0067922_2745_3416 220
165 3300049571 Ga0501034_0202922 Ga0501034_0202922_1061_1732 220
166 3300049571 Ga0501034_0530961 Ga0501034_0530961_226_897 220
167 3300049571 Ga0501034_0568586 Ga0501034_0568586_194_865 220
168 3300049571 Ga0501034_0940398 Ga0501034_0940398_45_716 220
169 3300049573 Ga0501037_0013898 Ga0501037_0013898_1243_1905 220
170 3300049573 Ga0501037_0139001 Ga0501037_0139001_817_1479 220
171 3300049573 Ga0501037_0227468 Ga0501037_0227468_109_780 220
172 3300049573 Ga0501037_0367497 Ga0501037_0367497_131_793 220
173 3300049574 Ga0501038_0021577 Ga0501038_0021577_2915_3586 220
174 3300049574 Ga0501038_0034116 Ga0501038_0034116_1203_1865 220
175 3300049574 Ga0501038_0146548 Ga0501038_0146548_72_743 220
176 3300049574 Ga0501038_0173334 Ga0501038_0173334_169_840 220
177 3300049574 Ga0501038_0263986 Ga0501038_0263986_628_1290 220
178 3300049575 Ga0501039_0459811 Ga0501039_0459811_164_826 220
179 3300049575 Ga0501039_0462941 Ga0501039_0462941_160_831 220
180 3300049578 Ga0501042_0008267 Ga0501042_0008267_222_884 220
181 3300049579 Ga0501043_0015291 Ga0501043_0015291_5028_5690 220
182 3300049579 Ga0501043_0066153 Ga0501043_0066153_1481_2143 220
183 3300049579 Ga0501043_0114143 Ga0501043_0114143_1184_1855 220
184 3300049580 Ga0501046_0015278 Ga0501046_0015278_445_1107 220
185 3300049580 Ga0501046_0194562 Ga0501046_0194562_505_1167 220
186 3300049581 Ga0501047_0016709 Ga0501047_0016709_5324_5986 220
187 3300049581 Ga0501047_0023647 Ga0501047_0023647_2881_3543 220
188 3300049582 Ga0501048_0133948 Ga0501048_0133948_427_1098 220
189 3300049586 Ga0501070_0246677 Ga0501070_0246677_521_1192 220
190 3300049589 Ga0501073_0198048 Ga0501073_0198048_180_842 220
191 3300049742 Ga0501080_0090306 Ga0501080_0090306_190_852 220
192 3300049822 Ga0501035_0069983 Ga0501035_0069983_1324_1986 220
193 3300049822 Ga0501035_0406664 Ga0501035_0406664_158_829 220
194 3300049823 Ga0501044_0015603 Ga0501044_0015603_1268_1930 220
195 3300049823 Ga0501044_0026604 Ga0501044_0026604_1262_1924 220
196 3300049824 Ga0501045_0159947 Ga0501045_0159947_95_757 220
197 3300050492 nmdc:mga0yw44_187091_c1 nmdc:mga0yw44_187091_c1_263_925 220
198 3300050495 nmdc:mga04h51_66015_c1 nmdc:mga04h51_66015_c1_19_681 220
199 3300050496 nmdc:mga07m45_437099_c1 nmdc:mga07m45_437099_c1_41_703 220
200 3300053153 Ga0500616_0000968 Ga0500616_0000968_9849_10511 220
201 iso_pu_bacteria 2721755702 2723642762 220
202 iso_pu_bacteria 2935409751 2935413066 220

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

168

224

0.98

PF08281

Sigma70_r4_2

Sigma-70, region 4

165

212

0.97

PF00072

Response_reg

Response regulator receiver domain

7

120

0.97

PF04545

Sigma70_r4

Sigma-70, region 4

166

214

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9914 153 215
4wul-assembly1.cif.gz_B crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9904 155 215
4wsz-assembly1.cif.gz_A crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9871 151 215
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9813 151 215
4wu4-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 22bp dna 0.9806 151 214
ID Description Score Start End Superfamily
4if4C02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9709 151 216 1.10.10.10
4if4D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9665 151 216 1.10.10.10
3ulqB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9651 155 209 1.10.10.10
4if4B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9649 151 216 1.10.10.10
3eulC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9566 1 121 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A850D035-F1-model_v4 deleted 0.9816 1 120
AF-A0A7J9ZUF4-F1-model_v4 Response regulator 0.9799 2 122 GO:0000160
GO:0003677
AF-A0A6J7IGP3-F1-model_v4 Unannotated protein 0.9682 2 120 GO:0000160
AF-A0A850D035-F1-model_v4 deleted 0.9657 1 120
AF-A0A4R4P3K2-F1-model_v4 Response regulator transcription factor 0.9633 1 219 GO:0000160
GO:0003677
GO:0006355

Feature Viewer

pLDDT pTM Quality
86.65 0.81 High
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Predicted Structure (AlphaFold2)

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