F309554

General Info

Members Datasets Scaffolds Average Seq Length
202 144 404 382

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100279402|Ga0070699_1002794022
Length 408
Sequence MAPEAPPVQGFCEPAFGAVREALANIIASGAEVGAALAVRVDKRPVVDLWGGHRDAERTRPWDADTLVNLYSIGKAVTAICALRLVDHGALDLDAPVARYWPEFAQAGKAWLPVRYLLTHEAGLPAVDHDLPPGAMLEWDVMTGALAAQEPWWEPGQAHGYHVNTQGFLIGEIVRRITGKSLGTYLRDEIAGPAGIDFVIGFGPELDARCADILPPLPSPEAEAQRGILDADLTSLTGLPRMRVLAYVNPRDLSGGGVVNTRRWRAAEVPSTNGHGTARAIARLYSALASDGELDGVHILSPEITAMAIAERVYAEDAVLRRPTRFGLGFQLTMPERPLGPNPRTFGHFGAGGSLGFADPDTRLSFGYAMNQGRAGWQHRHVRHLIDLVYEALPRRGAAPPFRRIERT

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
62 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
63 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
70 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
81 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
82 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
83 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
87 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
88 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
89 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
90 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
91 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
95 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
114 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
115 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
116 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
117 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
118 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
119 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
120 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
121 2643221548 Streptomyces sp. Root55 Isolate Unclassified
122 2643221578 Streptomyces sp. Root63 Isolate Unclassified
123 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
124 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
125 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
126 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
127 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
128 2867428634 Streptomyces sp. RP5T Isolate Unclassified
129 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
130 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
131 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
132 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
133 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
134 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
135 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
136 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
137 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
138 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
139 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
140 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
141 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
142 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
143 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
144 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.62
Metatranscriptomes 0
Isolates 12.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.98
Nodule 0.5
Rhizoplane 3.96
Rhizosphere 88.12
Stem 0
Stem Tuber 0
Unclassified 0.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100279402 3300005518 Bacteria 1495
2 Ga0068869_100005599 3300005334 Bacteria 7909
3 Ga0070680_100029223 3300005336 Bacteria 4427
4 Ga0070691_10004714 3300005341 Bacteria 6204
5 Ga0070709_10067243 3300005434 Bacteria 2300
6 Ga0070714_100095592 3300005435 Bacteria 2609
7 Ga0070714_100100277 3300005435 Bacteria 2550
8 Ga0070713_100064992 3300005436 Bacteria 3063
9 Ga0070701_10011899 3300005438 Bacteria 3906
10 Ga0070705_100139551 3300005440 Bacteria 1593
11 Ga0070694_100052273 3300005444 Bacteria 2761
12 Ga0070694_100084966 3300005444 Bacteria 2208
13 Ga0070708_100017464 3300005445 Bacteria 5987
14 Ga0070708_100056304 3300005445 Bacteria 3497
15 Ga0068867_100043747 3300005459 Bacteria 3279
16 Ga0070706_100012738 3300005467 Bacteria 7780
17 Ga0070706_100077939 3300005467 Bacteria 3068
18 Ga0070706_100131593 3300005467 Bacteria 2334
19 Ga0070706_100140020 3300005467 Bacteria 2258
20 Ga0070706_100356278 3300005467 Bacteria 1364
21 Ga0070707_100004184 3300005468 Bacteria 13525
22 Ga0070707_100005497 3300005468 Bacteria 11846
23 Ga0070707_100039254 3300005468 Bacteria 4524
24 Ga0070707_100074376 3300005468 Bacteria 3276
25 Ga0070707_100254167 3300005468 Unclassified 1710
26 Ga0070707_100280497 3300005468 Bacteria 1619
27 Ga0070698_100135156 3300005471 Bacteria 2420
28 Ga0070698_100228364 3300005471 Bacteria 1794
29 Ga0070699_100031930 3300005518 Bacteria 4547
30 Ga0070699_100137768 3300005518 Bacteria 2153
31 Ga0070699_100174817 3300005518 Bacteria 1904
32 Ga0070697_100052635 3300005536 Bacteria 3308
33 Ga0070695_100005995 3300005545 Bacteria 7174
34 Ga0070695_100052631 3300005545 Bacteria 2617
35 Ga0070695_100091559 3300005545 Bacteria 2031
36 Ga0070696_100019698 3300005546 Bacteria 4571
37 Ga0070696_100057453 3300005546 Bacteria 2716
38 Ga0070704_100078735 3300005549 Bacteria 2419
39 Ga0068855_100065188 3300005563 Bacteria 4247
40 Ga0068857_100009490 3300005577 Bacteria 8450
41 Ga0068854_100239843 3300005578 Bacteria 1443
42 Ga0068856_100060448 3300005614 Bacteria 3743
43 Ga0070702_100120109 3300005615 Bacteria 1644
44 Ga0068860_100035982 3300005843 Bacteria 4747
45 Ga0068860_100246775 3300005843 Bacteria 1738
46 Ga0068862_100070117 3300005844 Bacteria 3026
47 Ga0081455_10050523 3300005937 Bacteria 3575
48 Ga0075365_10172380 3300006038 Bacteria 1511
49 Ga0075364_10003798 3300006051 Bacteria 8644
50 Ga0070715_10007895 3300006163 Bacteria 3683
51 Ga0070716_100013167 3300006173 Bacteria 4211
52 Ga0070716_100062399 3300006173 Bacteria 2160
53 Ga0075428_100015917 3300006844 Bacteria 8320
54 Ga0075428_100106031 3300006844 Bacteria 3064
55 Ga0075428_100181225 3300006844 Bacteria 2280
56 Ga0075430_100079742 3300006846 Bacteria 2743
57 Ga0075430_100173003 3300006846 Bacteria 1797
58 Ga0075431_100024850 3300006847 Bacteria 6142
59 Ga0075431_100099689 3300006847 Bacteria 2997
60 Ga0075433_10001408 3300006852 Bacteria 17720
61 Ga0075433_10017430 3300006852 Bacteria 5947
62 Ga0075433_10034950 3300006852 Bacteria 4319
63 Ga0075433_10037743 3300006852 Bacteria 4169
64 Ga0075433_10224994 3300006852 Bacteria 1666
65 Ga0075434_100000105 3300006871 Bacteria 47780
66 Ga0075434_100023388 3300006871 Bacteria 6021
67 Ga0075434_100029322 3300006871 Bacteria 5411
68 Ga0075434_100102615 3300006871 Bacteria 2868
69 Ga0075434_100124468 3300006871 Bacteria 2595
70 Ga0075429_100002078 3300006880 Bacteria 16705
71 Ga0099826_10044104 3300006948 Bacteria 3063
72 Ga0075435_100019386 3300007076 Bacteria 5195
73 Ga0105245_10131635 3300009098 Bacteria 2347
74 Ga0114129_10002337 3300009147 Bacteria 26313
75 Ga0114129_10014149 3300009147 Bacteria 11368
76 Ga0114129_10063259 3300009147 Bacteria 5168
77 Ga0114129_10154593 3300009147 Bacteria 3138
78 Ga0114129_10200734 3300009147 Bacteria 2701
79 Ga0105242_10027641 3300009176 Bacteria 4508
80 Ga0105249_10075935 3300009553 Bacteria 3113
81 Ga0207426_1021380 3300025302 Bacteria 2237
82 Ga0207692_10016614 3300025898 Bacteria 3264
83 Ga0207685_10006210 3300025905 Bacteria 3233
84 Ga0207699_10023428 3300025906 Bacteria 3360
85 Ga0207684_10167765 3300025910 Bacteria 1892
86 Ga0207693_10077731 3300025915 Bacteria 2598
87 Ga0207693_10222363 3300025915 Bacteria 1483
88 Ga0207660_10060812 3300025917 Bacteria 2717
89 Ga0207646_10015724 3300025922 Bacteria 7130
90 Ga0207646_10113308 3300025922 Bacteria 2435
91 Ga0207664_10034354 3300025929 Bacteria 3905
92 Ga0207664_10074913 3300025929 Bacteria 2736
93 Ga0207686_10020337 3300025934 Bacteria 3790
94 Ga0207709_10227301 3300025935 Bacteria 1350
95 Ga0207665_10013908 3300025939 Bacteria 5293
96 Ga0207665_10022665 3300025939 Bacteria 4133
97 Ga0207689_10008945 3300025942 Bacteria 8682
98 Ga0207689_10028878 3300025942 Bacteria 4637
99 Ga0207648_10082751 3300026089 Bacteria 2799
100 Ga0207674_10016329 3300026116 Bacteria 8132
101 Ga0268265_10267781 3300028380 Bacteria 1522
102 Ga0268264_10142845 3300028381 Bacteria 2137
103 Ga0265337_1030043 3300028556 Bacteria 1620
104 Ga0265330_10007178 3300031235 Bacteria 5457
105 Ga0265330_10043269 3300031235 Bacteria 1993
106 Ga0265332_10000045 3300031238 Bacteria 113783
107 Ga0265320_10000103 3300031240 Bacteria 72829
108 Ga0265320_10035663 3300031240 Bacteria 2520
109 Ga0265325_10097907 3300031241 Bacteria 1439
110 Ga0265339_10058029 3300031249 Bacteria 2092
111 Ga0265331_10000053 3300031250 Bacteria 180451
112 Ga0265316_10000498 3300031344 Bacteria 44356
113 Ga0265314_10000327 3300031711 Bacteria 67031
114 Ga0265342_10005583 3300031712 Bacteria 9538
115 Ga0307409_100168707 3300031995 Bacteria 1924
116 Ga0307416_100001046 3300032002 Bacteria 14742
117 Ga0307510_10059564 3300033180 Bacteria 3940
118 Ga0373927_0000119 3300035695 Bacteria 59758
119 Ga0373937_0311012 3300036401 Bacteria 1490
120 Ga0373925_0001658 3300037068 Bacteria 18762
121 Ga0395900_0006261 3300037418 Bacteria 12415
122 Ga0395898_0000852 3300037466 Bacteria 50067
123 Ga0395898_0003886 3300037466 Bacteria 16500
124 Ga0395901_0022838 3300038443 Bacteria 6413
125 Ga0439436_0001247 3300041404 Bacteria 7260
126 Ga0439439_0003172 3300041406 Bacteria 3598
127 Ga0439449_0010477 3300042007 Bacteria 3502
128 Ga0439457_000610 3300042014 Bacteria 10554
129 Ga0451577_0200861 3300042876 Bacteria 1800
130 Ga0466960_0007249 3300044901 Bacteria 4493
131 Ga0495629_0012340 3300046459 Bacteria 6185
132 Ga0495580_0000683 3300046472 Bacteria 28898
133 Ga0495662_0127816 3300046476 Bacteria 1249
134 Ga0495667_0105328 3300046559 Bacteria 1823
135 Ga0495611_0060861 3300046648 Bacteria 1715
136 Ga0495588_0001948 3300046674 Bacteria 8800
137 Ga0495657_0142652 3300046675 Bacteria 1492
138 Ga0495613_0106616 3300046689 Bacteria 2022
139 Ga0495589_0086403 3300046794 Bacteria 1523
140 Ga0495676_0003886 3300047321 Bacteria 13588
141 Ga0495684_0010446 3300047471 Bacteria 7180
142 Ga0496104_0002370 3300048907 Bacteria 16255
143 Ga0496105_0071625 3300048908 Bacteria 2864
144 Ga0496108_0005208 3300048911 Bacteria 10510
145 Ga0496109_0094340 3300048912 Bacteria 2770
146 Ga0496112_0008170 3300048915 Bacteria 9352
147 Ga0496112_0034199 3300048915 Bacteria 4945
148 Ga0496113_0078990 3300048916 Bacteria 2518
149 Ga0496115_0017795 3300048918 Bacteria 5442
150 Ga0501031_0027480 3300049568 Bacteria 3710
151 Ga0501033_0173401 3300049570 Bacteria 1548
152 Ga0501073_0076843 3300049589 Bacteria 2324
153 Ga0501075_0065749 3300049591 Bacteria 2736
154 Ga0501076_0155195 3300049592 Bacteria 1863
155 Ga0501081_0143061 3300049743 Bacteria 1715
156 Ga0501035_0016522 3300049822 Bacteria 6805
157 nmdc:mga00v17_3394_c1 3300050491 Bacteria 8224
158 nmdc:mga05p37_140198_c1 3300050507 Bacteria 2963
159 nmdc:mga05p37_17934_c1 3300050507 Bacteria 8545
160 nmdc:mga09592_5794_c1 3300050508 Bacteria 10076
161 nmdc:mga0qj67_149436_c1 3300050509 Bacteria 1895
162 nmdc:mga0qj67_161294_c1 3300050509 Bacteria 1820
163 nmdc:mga0qj67_39364_c1 3300050509 Bacteria 3711
164 nmdc:mga0n895_2725_c1 3300050512 Bacteria 13933
165 nmdc:mga0n895_2728_c1 3300050512 Bacteria 13925
166 nmdc:mga0n895_79339_c1 3300050512 Bacteria 3269
167 nmdc:mga0n895_80075_c1 3300050512 Bacteria 3254
168 nmdc:mga0rr50_3772_c1 3300050513 Bacteria 8788
169 nmdc:mga0rr50_63271_c1 3300050513 Bacteria 2794
170 nmdc:mga0rr50_83272_c1 3300050513 Bacteria 2473
171 nmdc:mga0a205_11409_c1 3300050515 Bacteria 8178
172 nmdc:mga0a205_115749_c1 3300050515 Bacteria 2580
173 nmdc:mga0a205_240124_c1 3300050515 Bacteria 1693
174 nmdc:mga0a205_26136_c1 3300050515 Bacteria 5562
175 nmdc:mga0a205_91157_c1 3300050515 Bacteria 2945
176 Ga0495601_0109162 3300053077 Bacteria 1791
177 Ga0495619_0017997 3300053085 Bacteria 4481
178 2585305886 2582581313 Bacteria 10042643
179 2643760122 2643221548 Bacteria 8053412
180 2643904575 2643221578 Bacteria 9213798
181 2644406159 2643221673 Bacteria 9196637
182 2644460182 2643221682 Bacteria 6743283
183 2785366346 2784746768 Bacteria 10036182
184 2808846974 2808606359 Bacteria 9866990
185 2819696463 2818991463 Bacteria 7948711
186 2867430879 2867428634 Bacteria 9590268
187 2875392777 2875391855 Bacteria 7600475
188 2877684171 2877676314 Bacteria 9512378
189 2919177324 2919171160 Bacteria 6499771
190 2946051934 2946045630 Bacteria 8527308
191 2946064726 2946064051 Bacteria 8957905
192 2954700260 2954691527 Bacteria 10720516
193 2954701969 2954701450 Bacteria 10834262
194 2954728995 2954721474 Bacteria 10456478
195 2954732816 2954731030 Bacteria 10243860
196 2954747894 2954740390 Bacteria 10229294
197 2954751694 2954749733 Bacteria 10366972
198 2954767020 2954759201 Bacteria 9358192
199 2966604305 2966598605 Bacteria 7676064
200 3003005691 3002998708 Bacteria 11715108
201 8008581321 8008574985 Bacteria 7815457
202 8056830898 8056829672 Bacteria 9045328
203 Ga0070699_100279402
204 Ga0068869_100005599
205 Ga0070680_100029223
206 Ga0070691_10004714
207 Ga0070709_10067243
208 Ga0070714_100095592
209 Ga0070714_100100277
210 Ga0070713_100064992
211 Ga0070701_10011899
212 Ga0070705_100139551
213 Ga0070694_100052273
214 Ga0070694_100084966
215 Ga0070708_100017464
216 Ga0070708_100056304
217 Ga0068867_100043747
218 Ga0070706_100012738
219 Ga0070706_100077939
220 Ga0070706_100131593
221 Ga0070706_100140020
222 Ga0070706_100356278
223 Ga0070707_100004184
224 Ga0070707_100005497
225 Ga0070707_100039254
226 Ga0070707_100074376
227 Ga0070707_100254167
228 Ga0070707_100280497
229 Ga0070698_100135156
230 Ga0070698_100228364
231 Ga0070699_100031930
232 Ga0070699_100137768
233 Ga0070699_100174817
234 Ga0070697_100052635
235 Ga0070695_100005995
236 Ga0070695_100052631
237 Ga0070695_100091559
238 Ga0070696_100019698
239 Ga0070696_100057453
240 Ga0070704_100078735
241 Ga0068855_100065188
242 Ga0068857_100009490
243 Ga0068854_100239843
244 Ga0068856_100060448
245 Ga0070702_100120109
246 Ga0068860_100035982
247 Ga0068860_100246775
248 Ga0068862_100070117
249 Ga0081455_10050523
250 Ga0075365_10172380
251 Ga0075364_10003798
252 Ga0070715_10007895
253 Ga0070716_100013167
254 Ga0070716_100062399
255 Ga0075428_100015917
256 Ga0075428_100106031
257 Ga0075428_100181225
258 Ga0075430_100079742
259 Ga0075430_100173003
260 Ga0075431_100024850
261 Ga0075431_100099689
262 Ga0075433_10001408
263 Ga0075433_10017430
264 Ga0075433_10034950
265 Ga0075433_10037743
266 Ga0075433_10224994
267 Ga0075434_100000105
268 Ga0075434_100023388
269 Ga0075434_100029322
270 Ga0075434_100102615
271 Ga0075434_100124468
272 Ga0075429_100002078
273 Ga0099826_10044104
274 Ga0075435_100019386
275 Ga0105245_10131635
276 Ga0114129_10002337
277 Ga0114129_10014149
278 Ga0114129_10063259
279 Ga0114129_10154593
280 Ga0114129_10200734
281 Ga0105242_10027641
282 Ga0105249_10075935
283 Ga0207426_1021380
284 Ga0207692_10016614
285 Ga0207685_10006210
286 Ga0207699_10023428
287 Ga0207684_10167765
288 Ga0207693_10077731
289 Ga0207693_10222363
290 Ga0207660_10060812
291 Ga0207646_10015724
292 Ga0207646_10113308
293 Ga0207664_10034354
294 Ga0207664_10074913
295 Ga0207686_10020337
296 Ga0207709_10227301
297 Ga0207665_10013908
298 Ga0207665_10022665
299 Ga0207689_10008945
300 Ga0207689_10028878
301 Ga0207648_10082751
302 Ga0207674_10016329
303 Ga0268265_10267781
304 Ga0268264_10142845
305 Ga0265337_1030043
306 Ga0265330_10007178
307 Ga0265330_10043269
308 Ga0265332_10000045
309 Ga0265320_10000103
310 Ga0265320_10035663
311 Ga0265325_10097907
312 Ga0265339_10058029
313 Ga0265331_10000053
314 Ga0265316_10000498
315 Ga0265314_10000327
316 Ga0265342_10005583
317 Ga0307409_100168707
318 Ga0307416_100001046
319 Ga0307510_10059564
320 Ga0373927_0000119
321 Ga0373937_0311012
322 Ga0373925_0001658
323 Ga0395900_0006261
324 Ga0395898_0000852
325 Ga0395898_0003886
326 Ga0395901_0022838
327 Ga0439436_0001247
328 Ga0439439_0003172
329 Ga0439449_0010477
330 Ga0439457_000610
331 Ga0451577_0200861
332 Ga0466960_0007249
333 Ga0495629_0012340
334 Ga0495580_0000683
335 Ga0495662_0127816
336 Ga0495667_0105328
337 Ga0495611_0060861
338 Ga0495588_0001948
339 Ga0495657_0142652
340 Ga0495613_0106616
341 Ga0495589_0086403
342 Ga0495676_0003886
343 Ga0495684_0010446
344 Ga0496104_0002370
345 Ga0496105_0071625
346 Ga0496108_0005208
347 Ga0496109_0094340
348 Ga0496112_0008170
349 Ga0496112_0034199
350 Ga0496113_0078990
351 Ga0496115_0017795
352 Ga0501031_0027480
353 Ga0501033_0173401
354 Ga0501073_0076843
355 Ga0501075_0065749
356 Ga0501076_0155195
357 Ga0501081_0143061
358 Ga0501035_0016522
359 nmdc:mga00v17_3394_c1
360 nmdc:mga05p37_140198_c1
361 nmdc:mga05p37_17934_c1
362 nmdc:mga09592_5794_c1
363 nmdc:mga0qj67_149436_c1
364 nmdc:mga0qj67_161294_c1
365 nmdc:mga0qj67_39364_c1
366 nmdc:mga0n895_2725_c1
367 nmdc:mga0n895_2728_c1
368 nmdc:mga0n895_79339_c1
369 nmdc:mga0n895_80075_c1
370 nmdc:mga0rr50_3772_c1
371 nmdc:mga0rr50_63271_c1
372 nmdc:mga0rr50_83272_c1
373 nmdc:mga0a205_11409_c1
374 nmdc:mga0a205_115749_c1
375 nmdc:mga0a205_240124_c1
376 nmdc:mga0a205_26136_c1
377 nmdc:mga0a205_91157_c1
378 Ga0495601_0109162
379 Ga0495619_0017997
380 2585305886
381 2643760122
382 2643904575
383 2644406159
384 2644460182
385 2785366346
386 2808846974
387 2819696463
388 2867430879
389 2875392777
390 2877684171
391 2919177324
392 2946051934
393 2946064726
394 2954700260
395 2954701969
396 2954728995
397 2954732816
398 2954747894
399 2954751694
400 2954767020
401 2966604305
402 3003005691
403 8008581321
404 8056830898

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00144

Beta-lactamase

Beta-lactamase

19

391

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gkv-assembly1.cif.gz_A crystal structure of a novel penicillin-binding protein (pbp) homolog from caulobacter crescentus 0.9414 9 395
5gkv-assembly1.cif.gz_A crystal structure of a novel penicillin-binding protein (pbp) homolog from caulobacter crescentus 0.9365 9 395
5gmx-assembly2.cif.gz_B crystal structure of a family viii carboxylesterase 0.9335 9 395
5gmx-assembly2.cif.gz_B crystal structure of a family viii carboxylesterase 0.9286 9 395
7y3z-assembly2.cif.gz_A structure of a novel carboxylesterase feh from acinetobacter sp. dl-2 0.9168 9 394
ID Description Score Start End Superfamily
af_O53190_7_392_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8966 11 394 3.40.710.10
af_O53190_7_392_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8854 11 394 3.40.710.10
3zytA00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8806 13 394 3.40.710.10
af_Q09621_65_456_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8804 11 394 3.40.710.10
af_Q9XU43_37_429_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8641 11 394 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A6N9V6X6-F1-model_v4 Beta-lactamase family protein 0.9828 94 185
AF-A0A3N5IC03-F1-model_v4 Class A beta-lactamase-related serine hydrolase 0.978 126 395 GO:0016787
AF-A0A6I2VWQ9-F1-model_v4 Serine hydrolase 0.9776 8 209 GO:0016787
AF-V6KCN4-F1-model_v4 Beta-lactamase-related domain-containing protein 0.9752 72 193
AF-A0A100JEI2-F1-model_v4 deleted 0.9724 8 215

Map