F309161

General Info

Members Datasets Scaffolds Average Seq Length
201 157 402 860

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221714|2644633416
Length 986
Sequence LQIPALTDAEELTCDVLVIGGGTAGTMAALTAAERGADVLLLEKAHVRHSGALAMGMDGVNNAVIPGRAEPDDYVAEITRANDGIVDQSTVRQTATRGFAMVQRLESYGVKFEKDEHGDYAVRQVHRSGSYVLPMPEGKDVKKVLYRQLRRREMRERIRIENRVMPVRVLTAPDDGRAIGAVGFNTRTGQFVTVRAGGVILATGACGRLGLPASGYLYGTYENPTNAGDGYAMAYHAGAELTGIECFQINPLIKDYNGPACAYVANPFGGYQVNRHGERFVDSDYWSGQMMAEFAAEVASDRGPVYLKLSHLPEESIASLESILHSTERPSRGTFHAGRGHDYRTHDIEMHISEIGLCGGHSASGVRVDEHARTTVPRLYAAGDLACVPHNYMIGAFVFGDLAGSDAARYQAYDGELPADQLRQAHELIYRPLRNPEGPPQPQVEYKLRRFVNDYVAPPKSGARLSLALESFERMRDDIAEMGARTAHELMRCAEVSFIRDCAEMAARASLARTESRWGLYHERLDHPQRDDSSWFHHLDLHKSPSGAMEFTARPVAPYLVPIDEFTPVGGPSRHIGEVHAENVATAGSREVAPVAAGVESLASNTGLPAPAVPEPALDQASSPRSSSRLLELVALAEEEPELGALLPYLSDPAPAVRREAVAVLTETLPSGTGPALAEALRDPAAAVRSAAAASLRELVETLPAEPALRDGLAAALDEPDPVVRAAALDVLRALRLGDAALFSGSLADADIAVRIEAVRALVSVDAADELARAATADPSREVRVTIAKSLATVAAGRLSGDTPTEPGSSHGTGAVSAAGAASVADSGFRSGSGSGSGSGSGSGSGSGSGSGSGTGTGPDVVLEQDAVHTALVRLVDDPDALVRAAAYGALGTTGCPAPLAARAVDALADPAWQVRAGAATALSVTHPDTAVPVLAKALADPNADVRKAAVLALTRLRASEAARAALATATTDSDADVRAYAGRAL

Samples

Sample ID Description Type Environment
1 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
15 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
16 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
17 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
18 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
19 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
20 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
21 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
31 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
32 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
33 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
34 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
35 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
36 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
37 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
38 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
39 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
40 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
41 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
42 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
43 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
44 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
45 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
46 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
47 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
48 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
49 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
50 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
51 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
52 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
53 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
54 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
55 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
56 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
57 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
58 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
59 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
60 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
61 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
62 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
63 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
64 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
65 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
66 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
67 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
68 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
69 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
70 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
71 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
72 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
73 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
74 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
78 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
81 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
82 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
83 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
84 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
85 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
86 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
87 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
88 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
100 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
101 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
102 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
103 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
104 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
107 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
108 2643221714 Streptomyces sp. Root264 Isolate Unclassified
109 2547132424 Nocardia nova SH22a Isolate Unclassified
110 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
111 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
112 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
113 2643221647 Streptomyces sp. Root369 Isolate Unclassified
114 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
115 2643221692 Nocardia sp. Root136 Isolate Unclassified
116 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
117 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
118 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
119 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
120 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
121 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
122 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
123 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
124 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
125 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
126 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
127 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
128 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
129 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
130 2867428634 Streptomyces sp. RP5T Isolate Unclassified
131 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
132 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
133 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
134 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
135 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
136 2891562705 Microbispora tritici MT50 Isolate Unclassified
137 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
138 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
139 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
140 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
141 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
142 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
143 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
144 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
145 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
146 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
147 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
148 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
149 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
150 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
151 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
152 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
153 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
154 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
155 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
156 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
157 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.12
Metatranscriptomes 0
Isolates 24.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.93
Nodule 0.5
Rhizoplane 8.46
Rhizosphere 52.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1000085 3300003792 Bacteria 105366
2 Ga0070683_100021822 3300005329 Bacteria 5716
3 Ga0070667_100001073 3300005367 Bacteria 25019
4 Ga0070714_100028703 3300005435 Bacteria 4619
5 Ga0070710_10006770 3300005437 Bacteria 5526
6 Ga0070663_100010671 3300005455 Bacteria 5732
7 Ga0068853_100074094 3300005539 Bacteria 2970
8 Ga0075365_10000694 3300006038 Bacteria 13537
9 Ga0075365_10015204 3300006038 Bacteria 4650
10 Ga0075365_10015364 3300006038 Bacteria 4630
11 Ga0075363_100000528 3300006048 Bacteria 12321
12 Ga0075363_100002513 3300006048 Bacteria 7519
13 Ga0075363_100006484 3300006048 Bacteria 5319
14 Ga0075363_100018406 3300006048 Bacteria 3481
15 Ga0075363_100018661 3300006048 Bacteria 3460
16 Ga0075364_10019776 3300006051 Bacteria 4229
17 Ga0075364_10020958 3300006051 Bacteria 4116
18 Ga0075364_10031662 3300006051 Bacteria 3398
19 Ga0075367_10012260 3300006178 Bacteria 4564
20 Ga0075369_10012613 3300006186 Bacteria 3339
21 Ga0075370_10000967 3300006353 Bacteria 11868
22 Ga0105240_10057735 3300009093 Bacteria 4846
23 Ga0105241_10000239 3300009174 Bacteria 41568
24 Ga0105237_10001176 3300009545 Bacteria 34973
25 Ga0105249_10024576 3300009553 Bacteria 5416
26 Ga0182008_10002647 3300014497 Bacteria 11116
27 Ga0182007_10009350 3300015262 Bacteria 3960
28 Ga0183367_1002 3300015688 Bacteria 1101531
29 Ga0209051_1000200 3300025303 Bacteria 106484
30 Ga0209051_1000627 3300025303 Bacteria 40624
31 Ga0209051_1003497 3300025303 Bacteria 10272
32 Ga0207692_10005987 3300025898 Bacteria 4915
33 Ga0207647_10006121 3300025904 Bacteria 8768
34 Ga0207695_10010827 3300025913 Bacteria 11113
35 Ga0207671_10000365 3300025914 Bacteria 64530
36 Ga0207694_10001761 3300025924 Bacteria 18157
37 Ga0207639_10059646 3300026041 Bacteria 2940
38 Ga0207678_10035356 3300026067 Bacteria 4350
39 Ga0207675_100042087 3300026118 Bacteria 4264
40 Ga0307511_10024756 3300030521 Bacteria 5552
41 Ga0265327_10000167 3300031251 Bacteria 141405
42 Ga0265327_10000367 3300031251 Bacteria 85619
43 Ga0265327_10003739 3300031251 Bacteria 14147
44 Ga0265327_10004742 3300031251 Bacteria 11859
45 Ga0307514_10011518 3300031649 Bacteria 7353
46 Ga0307516_10007060 3300031730 Bacteria 12997
47 Ga0373962_0000519 3300035242 Bacteria 8610
48 Ga0395898_0006692 3300037466 Bacteria 12285
49 Ga0436365_0451493 3300039437 Bacteria 13485
50 Ga0436365_0672668 3300039437 Bacteria 16393
51 Ga0439436_0000571 3300041404 Bacteria 9752
52 Ga0439439_0002583 3300041406 Bacteria 3869
53 Ga0439431_0003699 3300041997 Bacteria 3380
54 Ga0466969_0001259 3300044656 Bacteria 13663
55 Ga0466972_0023078 3300044658 Bacteria 3096
56 Ga0466965_0001784 3300044683 Bacteria 8909
57 Ga0466966_0006670 3300044684 Bacteria 7643
58 Ga0466966_0026533 3300044684 Bacteria 3782
59 Ga0466961_0004670 3300044693 Bacteria 8601
60 Ga0466961_0032869 3300044693 Bacteria 3333
61 Ga0466963_0001704 3300044694 Bacteria 11975
62 Ga0466963_0018263 3300044694 Bacteria 4381
63 Ga0466971_0000161 3300044719 Bacteria 25159
64 Ga0466971_0000959 3300044719 Bacteria 11843
65 Ga0466970_0000292 3300044765 Bacteria 24512
66 Ga0466970_0002450 3300044765 Bacteria 8968
67 Ga0466970_0023126 3300044765 Bacteria 3244
68 Ga0466960_0002826 3300044901 Bacteria 6580
69 Ga0466959_0001085 3300045049 Bacteria 16284
70 Ga0466959_0005945 3300045049 Bacteria 8414
71 Ga0466959_0018705 3300045049 Bacteria 5088
72 Ga0466958_0009811 3300045836 Bacteria 5343
73 Ga0466958_0031459 3300045836 Bacteria 3154
74 Ga0466967_0015677 3300045976 Bacteria 5950
75 Ga0495605_0001918 3300046474 Bacteria 13238
76 Ga0495607_0004204 3300046501 Bacteria 10684
77 Ga0495606_0002492 3300046507 Bacteria 21287
78 Ga0495616_0009635 3300046513 Bacteria 5633
79 Ga0495631_0007051 3300046518 Bacteria 5747
80 Ga0495643_0002231 3300046522 Bacteria 15747
81 Ga0495648_0036833 3300046524 Bacteria 3149
82 Ga0495666_0005645 3300046526 Bacteria 6300
83 Ga0495586_0018096 3300046535 Bacteria 3748
84 Ga0495597_0014546 3300046542 Bacteria 3743
85 Ga0495622_0009857 3300046557 Bacteria 4416
86 Ga0495588_0000903 3300046674 Bacteria 13016
87 Ga0495657_0008022 3300046675 Bacteria 8095
88 Ga0495676_0022876 3300047321 Bacteria 5431
89 Ga0495685_000817 3300047447 Bacteria 9539
90 Ga0495685_002442 3300047447 Bacteria 5820
91 Ga0495686_0001711 3300047472 Bacteria 22657
92 Ga0495593_0003153 3300047673 Bacteria 9899
93 Ga0495626_0013018 3300048091 Bacteria 4337
94 Ga0496100_0000079 3300048903 Bacteria 54215
95 Ga0496100_0000880 3300048903 Bacteria 14314
96 Ga0496100_0001209 3300048903 Bacteria 12545
97 Ga0496101_0000113 3300048904 Bacteria 81197
98 Ga0496101_0000173 3300048904 Bacteria 51777
99 Ga0496102_0000035 3300048905 Bacteria 213557
100 Ga0496103_0000028 3300048906 Bacteria 213660
101 Ga0496103_0000771 3300048906 Bacteria 23611
102 Ga0496107_0018341 3300048910 Bacteria 4927
103 Ga0496108_0004214 3300048911 Bacteria 11583
104 Ga0496108_0107757 3300048911 Bacteria 2379
105 Ga0496109_0000108 3300048912 Bacteria 86134
106 Ga0496109_0010812 3300048912 Bacteria 7813
107 Ga0496112_0060514 3300048915 Bacteria 3732
108 Ga0496114_0000458 3300048917 Bacteria 29890
109 Ga0496115_0010742 3300048918 Bacteria 6848
110 Ga0496116_0000090 3300048919 Bacteria 212651
111 Ga0496117_0000051 3300048920 Bacteria 285716
112 Ga0496117_0041844 3300048920 Bacteria 3350
113 Ga0496118_0000043 3300048921 Bacteria 285716
114 Ga0496118_0000694 3300048921 Bacteria 54687
115 Ga0496118_0038709 3300048921 Bacteria 3817
116 Ga0496119_0001948 3300048922 Bacteria 23512
117 Ga0496121_0000014 3300048924 Bacteria 609379
118 Ga0496121_0003605 3300048924 Bacteria 21859
119 Ga0496122_0000132 3300048925 Bacteria 172228
120 Ga0496123_0018364 3300048926 Bacteria 5568
121 Ga0496124_0000106 3300048927 Bacteria 172511
122 Ga0496125_0000014 3300048928 Bacteria 610124
123 Ga0496126_0000017 3300048929 Bacteria 610676
124 Ga0496126_0013562 3300048929 Bacteria 8278
125 Ga0496126_0018345 3300048929 Bacteria 6935
126 Ga0501032_0001891 3300049569 Bacteria 16529
127 Ga0501034_0002753 3300049571 Bacteria 20648
128 Ga0501036_0011024 3300049572 Bacteria 7477
129 Ga0501037_0036025 3300049573 Bacteria 3647
130 Ga0501038_0005265 3300049574 Bacteria 12029
131 Ga0501043_0009985 3300049579 Bacteria 7447
132 Ga0501043_0056371 3300049579 Bacteria 3086
133 Ga0501046_0001024 3300049580 Bacteria 27292
134 Ga0501070_0000801 3300049586 Bacteria 28529
135 Ga0501070_0005812 3300049586 Bacteria 10528
136 Ga0501070_0035642 3300049586 Bacteria 4157
137 Ga0501035_0020258 3300049822 Bacteria 6107
138 Ga0501044_0002468 3300049823 Bacteria 21095
139 Ga0501044_0029337 3300049823 Bacteria 5801
140 nmdc:mga03n38_2833_c1 3300050490 Bacteria 5456
141 nmdc:mga03n38_5752_c1 3300050490 Bacteria 4252
142 nmdc:mga03n38_8326_c1 3300050490 Bacteria 3717
143 nmdc:mga00v17_15053_c1 3300050491 Bacteria 4335
144 nmdc:mga00v17_923_c1 3300050491 Bacteria 15793
145 nmdc:mga06z11_2733_c1 3300050494 Bacteria 6764
146 nmdc:mga07m45_12604_c1 3300050496 Bacteria 4471
147 nmdc:mga0sz30_1043_c1 3300050516 Bacteria 6737
148 Ga0500616_0018290 3300053153 Bacteria 3964
149 Ga0500645_000070 3300053730 Bacteria 79917
150 Ga0466962_0001242 3300061719 Bacteria 11745
151 Ga0466962_0003878 3300061719 Bacteria 7145
152 2644633416 2643221714 Bacteria 9015452
153 2548692534 2547132424 Bacteria 8348532
154 2585308190 2582581313 Bacteria 10042643
155 2644014584 2643221601 Bacteria 7493239
156 2644176019 2643221631 Bacteria 8168043
157 2644261695 2643221647 Bacteria 10741251
158 2644439230 2643221678 Bacteria 9540101
159 2644514611 2643221692 Bacteria 7282860
160 2644633591 2643221715 Bacteria 6671032
161 2738668693 2738541264 Bacteria 5935393
162 2738702898 2738541274 Bacteria 6909446
163 2739147885 2738541356 Bacteria 5935017
164 2739240218 2738543011 Bacteria 5731169
165 2739329813 2738543028 Bacteria 6917070
166 2744957286 2744054611 Bacteria 5611514
167 2784589636 2784132148 Bacteria 8627943
168 2785370679 2784746768 Bacteria 10036182
169 2786671862 2786546132 Bacteria 10419719
170 2793978426 2791355406 Bacteria 11364898
171 2808917187 2808606375 Bacteria 9466072
172 2812356814 2811994879 Bacteria 9313447
173 2856744531 2856741275 Bacteria 8096094
174 2867429368 2867428634 Bacteria 9590268
175 2873321813 2873314349 Bacteria 8512634
176 2877679909 2877676314 Bacteria 9512378
177 2889302868 2889300758 Bacteria 5690814
178 2891399303 2891395885 Bacteria 9251614
179 2891557374 2891554331 Bacteria 8812224
180 2891567493 2891562705 Bacteria 8039471
181 2895434424 2895427314 Bacteria 13147766
182 2902802945 2902799365 Bacteria 5419524
183 2902815106 2902810491 Bacteria 6794147
184 2918508156 2918501144 Bacteria 8668083
185 2919475449 2919468124 Bacteria 9133025
186 2939749053 2939743619 Bacteria 5762299
187 2946069058 2946064051 Bacteria 8957905
188 2946077004 2946072368 Bacteria 8999607
189 2954010225 2954002825 Bacteria 9173742
190 2954384865 2954380949 Bacteria 10050426
191 2954695678 2954691527 Bacteria 10720516
192 2954710871 2954701450 Bacteria 10834262
193 2997455591 2997451912 Bacteria 8492419
194 3006328256 3006321560 Bacteria 8247479
195 8001788745 8001781756 Bacteria 9586736
196 8008566446 8008558824 Bacteria 10610750
197 8047897057 8047893842 Bacteria 11723082
198 8048361895 8048356638 Bacteria 11044339
199 8048374041 8048369669 Bacteria 11666822
200 8048384185 8048379754 Bacteria 11877923
201 8053947151 8053945823 Bacteria 8962862
202 Ga0055540_1000085
203 Ga0070683_100021822
204 Ga0070667_100001073
205 Ga0070714_100028703
206 Ga0070710_10006770
207 Ga0070663_100010671
208 Ga0068853_100074094
209 Ga0075365_10000694
210 Ga0075365_10015204
211 Ga0075365_10015364
212 Ga0075363_100000528
213 Ga0075363_100002513
214 Ga0075363_100006484
215 Ga0075363_100018406
216 Ga0075363_100018661
217 Ga0075364_10019776
218 Ga0075364_10020958
219 Ga0075364_10031662
220 Ga0075367_10012260
221 Ga0075369_10012613
222 Ga0075370_10000967
223 Ga0105240_10057735
224 Ga0105241_10000239
225 Ga0105237_10001176
226 Ga0105249_10024576
227 Ga0182008_10002647
228 Ga0182007_10009350
229 Ga0183367_1002
230 Ga0209051_1000200
231 Ga0209051_1000627
232 Ga0209051_1003497
233 Ga0207692_10005987
234 Ga0207647_10006121
235 Ga0207695_10010827
236 Ga0207671_10000365
237 Ga0207694_10001761
238 Ga0207639_10059646
239 Ga0207678_10035356
240 Ga0207675_100042087
241 Ga0307511_10024756
242 Ga0265327_10000167
243 Ga0265327_10000367
244 Ga0265327_10003739
245 Ga0265327_10004742
246 Ga0307514_10011518
247 Ga0307516_10007060
248 Ga0373962_0000519
249 Ga0395898_0006692
250 Ga0436365_0451493
251 Ga0436365_0672668
252 Ga0439436_0000571
253 Ga0439439_0002583
254 Ga0439431_0003699
255 Ga0466969_0001259
256 Ga0466972_0023078
257 Ga0466965_0001784
258 Ga0466966_0006670
259 Ga0466966_0026533
260 Ga0466961_0004670
261 Ga0466961_0032869
262 Ga0466963_0001704
263 Ga0466963_0018263
264 Ga0466971_0000161
265 Ga0466971_0000959
266 Ga0466970_0000292
267 Ga0466970_0002450
268 Ga0466970_0023126
269 Ga0466960_0002826
270 Ga0466959_0001085
271 Ga0466959_0005945
272 Ga0466959_0018705
273 Ga0466958_0009811
274 Ga0466958_0031459
275 Ga0466967_0015677
276 Ga0495605_0001918
277 Ga0495607_0004204
278 Ga0495606_0002492
279 Ga0495616_0009635
280 Ga0495631_0007051
281 Ga0495643_0002231
282 Ga0495648_0036833
283 Ga0495666_0005645
284 Ga0495586_0018096
285 Ga0495597_0014546
286 Ga0495622_0009857
287 Ga0495588_0000903
288 Ga0495657_0008022
289 Ga0495676_0022876
290 Ga0495685_000817
291 Ga0495685_002442
292 Ga0495686_0001711
293 Ga0495593_0003153
294 Ga0495626_0013018
295 Ga0496100_0000079
296 Ga0496100_0000880
297 Ga0496100_0001209
298 Ga0496101_0000113
299 Ga0496101_0000173
300 Ga0496102_0000035
301 Ga0496103_0000028
302 Ga0496103_0000771
303 Ga0496107_0018341
304 Ga0496108_0004214
305 Ga0496108_0107757
306 Ga0496109_0000108
307 Ga0496109_0010812
308 Ga0496112_0060514
309 Ga0496114_0000458
310 Ga0496115_0010742
311 Ga0496116_0000090
312 Ga0496117_0000051
313 Ga0496117_0041844
314 Ga0496118_0000043
315 Ga0496118_0000694
316 Ga0496118_0038709
317 Ga0496119_0001948
318 Ga0496121_0000014
319 Ga0496121_0003605
320 Ga0496122_0000132
321 Ga0496123_0018364
322 Ga0496124_0000106
323 Ga0496125_0000014
324 Ga0496126_0000017
325 Ga0496126_0013562
326 Ga0496126_0018345
327 Ga0501032_0001891
328 Ga0501034_0002753
329 Ga0501036_0011024
330 Ga0501037_0036025
331 Ga0501038_0005265
332 Ga0501043_0009985
333 Ga0501043_0056371
334 Ga0501046_0001024
335 Ga0501070_0000801
336 Ga0501070_0005812
337 Ga0501070_0035642
338 Ga0501035_0020258
339 Ga0501044_0002468
340 Ga0501044_0029337
341 nmdc:mga03n38_2833_c1
342 nmdc:mga03n38_5752_c1
343 nmdc:mga03n38_8326_c1
344 nmdc:mga00v17_15053_c1
345 nmdc:mga00v17_923_c1
346 nmdc:mga06z11_2733_c1
347 nmdc:mga07m45_12604_c1
348 nmdc:mga0sz30_1043_c1
349 Ga0500616_0018290
350 Ga0500645_000070
351 Ga0466962_0001242
352 Ga0466962_0003878
353 2644633416
354 2548692534
355 2585308190
356 2644014584
357 2644176019
358 2644261695
359 2644439230
360 2644514611
361 2644633591
362 2738668693
363 2738702898
364 2739147885
365 2739240218
366 2739329813
367 2744957286
368 2784589636
369 2785370679
370 2786671862
371 2793978426
372 2808917187
373 2812356814
374 2856744531
375 2867429368
376 2873321813
377 2877679909
378 2889302868
379 2891399303
380 2891557374
381 2891567493
382 2895434424
383 2902802945
384 2902815106
385 2918508156
386 2919475449
387 2939749053
388 2946069058
389 2946077004
390 2954010225
391 2954384865
392 2954695678
393 2954710871
394 2997455591
395 3006328256
396 8001788745
397 8008566446
398 8047897057
399 8048361895
400 8048374041
401 8048384185
402 8053947151

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02985

HEAT

HEAT repeat

674

703

0.95

PF02985

HEAT

HEAT repeat

931

957

0.94

PF13646

HEAT_2

HEAT repeats

643

733

0.93

PF02910

Succ_DH_flav_C

Fumarate reductase flavoprotein C-term

445

569

0.89

PF13646

HEAT_2

HEAT repeats

901

986

0.87

PF01134

GIDA

Glucose inhibited division protein A

15

94

0.86

PF00890

FAD_binding_2

FAD binding domain

15

393

0.79

PF12831

FAD_oxidored

FAD dependent oxidoreductase

15

272

0.78

PF01266

DAO

FAD dependent oxidoreductase

15

175

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
1pgn-assembly1.cif.gz_A crystallographic study of coenzyme, coenzyme analogue and substrate binding in 6-phosphogluconate dehydrogenase: implications for nadp specificity and the enzyme mechanism 0.9155 18 46
7wnn-assembly1.cif.gz_A crystal structure of imine reductase from actinoalloteichus hymeniacidonis in complex with nadph 0.9122 17 48
3zhb-assembly2.cif.gz_C r-imine reductase from streptomyces kanamyceticus in complex with nadp. 0.9121 18 48
8a5z-assembly1.cif.gz_A imine reductase from ensifer adhaerens a208n mutant in complex with nadp+ 0.9044 17 48
7xe8-assembly2.cif.gz_B crystal structure of imine reductase from streptomyces albidoflavus 0.9041 16 46
ID Description Score Start End Superfamily
af_P0A6S7_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9216 15 44 3.40.50.720
1ps9A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9087 16 44 3.40.50.720
4jw2A00 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.8921 817 873 1.25.10.10
1jnrC03 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.8885 428 521 1.20.58.100
6eodD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8859 17 48 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6G3UN50-F1-model_v4 Oxidoreductase 0.9272 773 874
AF-A0A4Q6GUM6-F1-model_v4 Fumarate reductase/succinate dehydrogenase flavoprotein subunit 0.9134 352 559 GO:0000104
GO:0005886
GO:0009055
GO:0009061
GO:0050660
AF-A0A485EKU5-F1-model_v4 deleted 0.8884 368 543
AF-A0A1Z4VEV1-F1-model_v4 deleted 0.8853 11 178
AF-A0A6G3UN50-F1-model_v4 Oxidoreductase 0.8782 773 874

Map