F307918

General Info

Members Datasets Scaffolds Average Seq Length
200 186 400 599

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2971410472|2971417488
Length 626
Sequence NSAKNSKAYQYMLMRWILLELQVLNSPFNQEQVELLNRVLPTLTDTQRIWLSGYLTAQQGSTTSATAPVASVPTAAASQPVISKEVTLLFGSQTGNSHGLAKKFAKKLEEQSFQVTLSSMSDFKPNNLKKVQNLLIIVSTHGEGDAPDNAISFYEFLHSKRAPQLEELRYSVLSLGDTSYEFFCQTGKDFDKRLQELGAKSLTERVDCDVDFDEPAAAWITSVLGALNASSANAVGGGSTAAASAVVSAESEYSRTNPFQAEVLENLNLNGRGSDRETRHVEISLEGSNLQYEPGDSLGVFPENHPRLVDELIQAMNWNASTPVAVNKNGEERPLQEALLRKFEITVLTKPLLEQVAKLTANDKLQALVTPGNEAELKSYIAGRDLLDLVQDFSLQGVPATQFVAVLRKLPARLYSIASSSKASPDEVHITVRSVRYEANGRNRYGVCSVHLAERALSGAALPVYIQNNPNFKLPENPETPIIMIGPGTGVAPFRSFLAEREETGADGKTWLFYGDQHFATDFLYQVEWQRWLKDGVLTKLDVAFSRDTDQKVYVQNRMLEKSRELYQWLQEGAVVYICGDEKKMAHDVNAALLTILEQEGGLNNEEAVQYLANMQQQKRYQRDVY

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
13 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
14 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
15 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
16 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
17 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
19 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
20 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
26 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
27 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
28 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
29 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
30 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
31 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
32 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
33 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
34 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
35 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
36 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
37 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
38 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
39 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
40 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
41 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
42 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
43 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
44 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
45 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
46 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
47 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
48 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
49 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
50 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
51 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300049133 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300049134 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300049548 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300049550 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300049552 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300049553 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_A_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
70 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
71 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
72 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
73 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
74 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
75 2554235283 Bacillus safensis VK Isolate Rhizosphere
76 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
77 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
78 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
79 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
80 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
81 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
82 2599185353 Staphylococcus sp. NFPP34 Isolate Rhizoplane
83 2600254943 Staphylococcus pasteuri NFIX07 Isolate Rhizoplane
84 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
85 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
86 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
87 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
88 2643221731 Bacillus sp. Root147 Isolate Unclassified
89 2643221732 Bacillus sp. Root239 Isolate Unclassified
90 2643221735 Bacillus sp. Root920 Isolate Unclassified
91 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
92 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
93 2671180694 Paenibacillus sp. A3 Isolate Unclassified
94 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
95 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
96 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
97 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
98 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
99 2738543010 Bacillus sp. YR335 Isolate Unclassified
100 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
101 2811994870 Bacillus sp. JB4 Isolate Unclassified
102 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
103 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
104 2818991441 Niallia circulans 3243 Isolate Rhizosphere
105 2818991459 Paenibacillus sp. 597 Isolate Unclassified
106 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
107 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
108 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
109 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
110 2842682962 Bacillus sp. R-72492 Isolate Unclassified
111 2842882022 Bacillus sp. R-71893 Isolate Unclassified
112 2849139964 Bacillus sp. R-71875 Isolate Unclassified
113 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
114 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
115 2857472729 Cohnella sp. R-74144 Isolate Unclassified
116 2857581216 Bacillus sp. R-71922 Isolate Unclassified
117 2860837431 Bacillus sp. WR11 Isolate Unclassified
118 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
119 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
120 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
121 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
122 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
123 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
124 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
125 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
126 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
127 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
128 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
129 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
130 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
131 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
132 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
133 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
134 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
135 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
136 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
137 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
138 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
139 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
140 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
141 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
142 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
143 2919720352 Priestia megaterium 4340 Isolate Unclassified
144 2919726948 Bacillus pumilus 4489 Isolate Unclassified
145 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
146 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
147 2929004312 Priestia megaterium 1104 Isolate Unclassified
148 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
149 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
150 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
151 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
152 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
153 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
154 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
155 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
156 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
157 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
158 2969141011 Bacillus velezensis MH25 Isolate Unclassified
159 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
160 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
161 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
162 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
163 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
164 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
165 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
166 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
167 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
168 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
169 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
170 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
171 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
172 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
173 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
174 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
175 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
176 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
177 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
178 8022653035 Bacillus sp. Rc4 Isolate Unclassified
179 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
180 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
181 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
182 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
183 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
184 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
185 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
186 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 29
Metatranscriptomes 12
Isolates 59

Biome Distribution

Category Percentage (%)
Aerial Root 1
Bulb 0
Endosphere 5.5
Nodule 1
Rhizoplane 5.5
Rhizosphere 55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000418 3300003187 Bacteria 42847
2 JGI25151J46595_10016071 3300003187 Bacteria 3280
3 rootH1_10037166 3300003316 Bacteria 9333
4 Ga0006562J51391_1007191 3300003578 Bacteria 4030
5 Ga0006562J51391_1011199 3300003578 Bacteria 4000
6 Ga0055538_1001096 3300003751 Bacteria 5894
7 Ga0055528_1007621 3300003790 Bacteria 4758
8 Ga0070709_10019532 3300005434 Bacteria 3919
9 Ga0070710_10019844 3300005437 Bacteria 3479
10 Ga0070679_100036048 3300005530 Bacteria 4908
11 Ga0070696_100015860 3300005546 Bacteria 5065
12 Ga0068855_100088388 3300005563 Bacteria 3579
13 Ga0070717_10024613 3300006028 Bacteria 4782
14 Ga0105244_10018201 3300009036 Bacteria 3950
15 Ga0105240_10139067 3300009093 Bacteria 2905
16 Ga0157372_10037226 3300013307 Bacteria 5365
17 Ga0209784_100306 3300025224 Bacteria 26148
18 Ga0209566_101114 3300025225 Bacteria 10317
19 Ga0209147_101317 3300025229 Bacteria 9536
20 Ga0209673_1004839 3300025273 Bacteria 7048
21 Ga0209025_1000001 3300025294 Bacteria 1888151
22 Ga0209025_1015050 3300025294 Bacteria 4699
23 Ga0209025_1022994 3300025294 Bacteria 3280
24 Ga0207696_1012634 3300025711 Bacteria 2978
25 Ga0207655_1012322 3300025728 Bacteria 5007
26 Ga0207713_1013916 3300025735 Bacteria 4211
27 Ga0207664_10003919 3300025929 Bacteria 10001
28 Ga0207664_10012105 3300025929 Bacteria 6161
29 Ga0207667_10080195 3300025949 Bacteria 3382
30 Ga0209371_1008696 3300027312 Bacteria 3328
31 Ga0268256_1005989 3300030500 Bacteria 4637
32 Ga0307416_100016388 3300032002 Bacteria 5151
33 Ga0451577_0000230 3300042876 Bacteria 113101
34 Ga0466969_0001712 3300044656 Bacteria 11730
35 Ga0453684_0000759 3300044712 Bacteria 112043
36 Ga0453684_0022403 3300044712 Bacteria 9373
37 Ga0466959_0010820 3300045049 Bacteria 6540
38 Ga0451576_0000346 3300045051 Bacteria 112037
39 Ga0451576_0007876 3300045051 Bacteria 12630
40 Ga0495661_0041390 3300046665 Bacteria 2851
41 Ga0495649_0053739 3300046694 Bacteria 2180
42 Ga0496104_0009045 3300048907 Bacteria 8856
43 Ga0496105_0000134 3300048908 Bacteria 49734
44 Ga0496106_0002224 3300048909 Bacteria 14465
45 Ga0496107_0004518 3300048910 Bacteria 9427
46 Ga0496108_0000662 3300048911 Bacteria 26551
47 Ga0496109_0003022 3300048912 Bacteria 14029
48 Ga0496110_0005296 3300048913 Bacteria 10098
49 Ga0496111_0007750 3300048914 Bacteria 7065
50 Ga0496111_0014172 3300048914 Bacteria 5440
51 Ga0496116_0006580 3300048919 Bacteria 10522
52 Ga0496116_0014644 3300048919 Bacteria 6250
53 Ga0496118_0082063 3300048921 Bacteria 2261
54 Ga0496119_0004323 3300048922 Bacteria 14184
55 Ga0496122_0018878 3300048925 Bacteria 6336
56 Ga0496122_0120147 3300048925 Bacteria 1697
57 Ga0496123_0048357 3300048926 Bacteria 2862
58 Ga0496124_0050257 3300048927 Bacteria 3554
59 Ga0496125_0005689 3300048928 Bacteria 13747
60 Ga0496126_0002714 3300048929 Bacteria 23398
61 Ga0501306_001497 3300049127 Bacteria 2221
62 Ga0501343_000106 3300049132 Bacteria 3657
63 Ga0501344_00032 3300049133 Bacteria 3551
64 Ga0501345_00158 3300049134 Bacteria 1885
65 Ga0501305_000251 3300049161 Bacteria 4003
66 Ga0501307_001061 3300049162 Bacteria 2184
67 Ga0501311_000178 3300049527 Bacteria 3639
68 Ga0501313_000145 3300049529 Bacteria 3770
69 Ga0501315_000344 3300049531 Bacteria 3055
70 Ga0501316_000138 3300049532 Bacteria 3917
71 Ga0501316_000573 3300049532 Bacteria 2631
72 Ga0501316_000987 3300049532 Bacteria 2254
73 Ga0501317_000083 3300049533 Bacteria 4694
74 Ga0501317_000246 3300049533 Bacteria 3398
75 Ga0501318_000178 3300049534 Bacteria 3277
76 Ga0501321_000100 3300049537 Bacteria 4129
77 Ga0501332_00143 3300049548 Bacteria 2473
78 Ga0501334_00242 3300049550 Bacteria 2243
79 Ga0501335_000108 3300049551 Bacteria 3855
80 Ga0501336_000135 3300049552 Bacteria 2920
81 Ga0501337_000099 3300049553 Bacteria 3294
82 Ga0501337_000125 3300049553 Bacteria 2991
83 2971417488 2971410472 Bacteria 8311090
84 2511701061 2511231119 Bacteria 4019861
85 2512637365 2512564013 Bacteria 6286191
86 2512733979 2512564039 Bacteria 8739048
87 2540608260 2540341094 Bacteria 4061186
88 2545559670 2545555800 Bacteria 4222588
89 2555471003 2554235283 Bacteria 3683090
90 2563930696 2563366752 Bacteria 4961801
91 2573040677 2571042588 Bacteria 5045676
92 2578337161 2576861424 Bacteria 5270569
93 2578930629 2576861599 Bacteria 4217202
94 2587742451 2585428059 Bacteria 8696589
95 2595315449 2593339198 Bacteria 7267884
96 2600199893 2599185353 Bacteria 2219443
97 2600402005 2600254943 Bacteria 2613887
98 2621275461 2619619294 Bacteria 5575484
99 2631983625 2630968484 Bacteria 3876276
100 2643736411 2643221543 Bacteria 6628015
101 2644427180 2643221676 Bacteria 8119172
102 2644717182 2643221731 Bacteria 5623886
103 2644725994 2643221732 Bacteria 5756404
104 2644740294 2643221735 Bacteria 3676263
105 2651530678 2648501850 Bacteria 3975476
106 2672335789 2671180330 Bacteria 5521719
107 2673818253 2671180694 Bacteria 7506943
108 2674422000 2671180844 Bacteria 4164150
109 2686997039 2684623153 Bacteria 3878815
110 2687498345 2687453109 Bacteria 3860091
111 2695629016 2695420354 Bacteria 3922431
112 2717915287 2716884898 Bacteria 3928789
113 2739232732 2738543010 Bacteria 5583595
114 2809053390 2808606399 Bacteria 4021018
115 2812316229 2811994870 Bacteria 3776934
116 2816864880 2816332186 Bacteria 5331395
117 2817479450 2816332295 Bacteria 4352468
118 2819569839 2818991441 Bacteria 5062707
119 2819668598 2818991459 Bacteria 8736032
120 2819710593 2818991465 Bacteria 5388835
121 2819724984 2818991468 Bacteria 3723169
122 2821113240 2821111986 Bacteria 6894338
123 2823528199 2823526263 Bacteria 3765752
124 2842683737 2842682962 Bacteria 5589973
125 2842883363 2842882022 Bacteria 6158489
126 2849142296 2849139964 Bacteria 5613304
127 2852675562 2852673933 Bacteria 3347676
128 2857458579 2857453340 Bacteria 8090534
129 2857475351 2857472729 Bacteria 6568124
130 2857581816 2857581216 Bacteria 5522813
131 2860841053 2860837431 Bacteria 4202080
132 2864739020 2864733723 Bacteria 6770668
133 2864998427 2864997549 Bacteria 5139696
134 2877771948 2877768649 Bacteria 3957164
135 2880172787 2880169592 Bacteria 3900066
136 2881637518 2881636855 Bacteria 5205297
137 2885526493 2885526491 Bacteria 7164189
138 2888581700 2888578766 Bacteria 6743310
139 2889045253 2889042446 Bacteria 7618936
140 2889049651 2889049205 Bacteria 7524325
141 2889298795 2889295896 Bacteria 4704906
142 2897113064 2897109615 Bacteria 4009619
143 2904165043 2904162308 Bacteria 7086713
144 2904492127 2904490793 Bacteria 7046938
145 2904525964 2904524088 Bacteria 5887454
146 2904561383 2904560550 Bacteria 4029838
147 2904757572 2904755435 Bacteria 7986759
148 2907203236 2907202186 Bacteria 6632024
149 2908665527 2908665501 Bacteria 3678115
150 2915598228 2915597211 Bacteria 6475886
151 2919094373 2919093281 Bacteria 3660974
152 2919145446 2919143609 Bacteria 6219228
153 2919161356 2919160200 Bacteria 6929020
154 2919419654 2919414237 Bacteria 5429133
155 2919426816 2919425241 Bacteria 8055701
156 2919517385 2919517244 Bacteria 5858162
157 2919721767 2919720352 Bacteria 5986006
158 2919730489 2919726948 Bacteria 3696050
159 2925329181 2925326138 Bacteria 9652120
160 2928094474 2928093941 Bacteria 5965005
161 2929007004 2929004312 Bacteria 5678476
162 2929189774 2929183550 Bacteria 6377511
163 2931388687 2931384279 Bacteria 7299545
164 2939682768 2939679117 Bacteria 6921672
165 2945992739 2945991243 Bacteria 7008369
166 2946055488 2946053406 Bacteria 6978655
167 2954774277 2954773129 Bacteria 3741715
168 2960321641 2960319331 Bacteria 5502575
169 2960378993 2960375949 Bacteria 5361395
170 2962294287 2962290636 Bacteria 4072939
171 2969140262 2969136845 Bacteria 3923176
172 2969144501 2969141011 Bacteria 4118468
173 2969768964 2969765954 Bacteria 4216713
174 2969771292 2969770375 Bacteria 4271280
175 2971511636 2971511577 Bacteria 5404012
176 2971896621 2971893375 Bacteria 3929648
177 2977257767 2977254563 Bacteria 4828420
178 2980182054 2980176882 Bacteria 5397533
179 2980185208 2980182181 Bacteria 9454109
180 2980496048 2980492589 Bacteria 4072961
181 2981288165 2981284811 Bacteria 4641497
182 2981292987 2981289755 Bacteria 4641509
183 2981983869 2981980479 Bacteria 4641628
184 2981988791 2981985349 Bacteria 4641497
185 2984529558 2984527788 Bacteria 5288478
186 2984535665 2984532647 Bacteria 5288506
187 2990278791 2990275345 Bacteria 4887158
188 3001892592 3001892409 Bacteria 6328293
189 3006859775 3006858327 Bacteria 4317835
190 3006882789 3006879489 Bacteria 4064221
191 8022633213 8022630665 Bacteria 3886130
192 8022657076 8022653035 Bacteria 4035078
193 8022893230 8022893055 Bacteria 5300455
194 8022920437 8022914991 Bacteria 5584517
195 8022953091 8022948649 Bacteria 5366783
196 8051954437 8051952484 Bacteria 3926774
197 8052175480 8052174270 Bacteria 3881265
198 8054282202 8054280661 Bacteria 4232245
199 8054797471 8054795415 Bacteria 9785225
200 8056540179 8056533031 Bacteria 8964429
201 JGI25151J46595_10000418
202 JGI25151J46595_10016071
203 rootH1_10037166
204 Ga0006562J51391_1007191
205 Ga0006562J51391_1011199
206 Ga0055538_1001096
207 Ga0055528_1007621
208 Ga0070709_10019532
209 Ga0070710_10019844
210 Ga0070679_100036048
211 Ga0070696_100015860
212 Ga0068855_100088388
213 Ga0070717_10024613
214 Ga0105244_10018201
215 Ga0105240_10139067
216 Ga0157372_10037226
217 Ga0209784_100306
218 Ga0209566_101114
219 Ga0209147_101317
220 Ga0209673_1004839
221 Ga0209025_1000001
222 Ga0209025_1015050
223 Ga0209025_1022994
224 Ga0207696_1012634
225 Ga0207655_1012322
226 Ga0207713_1013916
227 Ga0207664_10003919
228 Ga0207664_10012105
229 Ga0207667_10080195
230 Ga0209371_1008696
231 Ga0268256_1005989
232 Ga0307416_100016388
233 Ga0451577_0000230
234 Ga0466969_0001712
235 Ga0453684_0000759
236 Ga0453684_0022403
237 Ga0466959_0010820
238 Ga0451576_0000346
239 Ga0451576_0007876
240 Ga0495661_0041390
241 Ga0495649_0053739
242 Ga0496104_0009045
243 Ga0496105_0000134
244 Ga0496106_0002224
245 Ga0496107_0004518
246 Ga0496108_0000662
247 Ga0496109_0003022
248 Ga0496110_0005296
249 Ga0496111_0007750
250 Ga0496111_0014172
251 Ga0496116_0006580
252 Ga0496116_0014644
253 Ga0496118_0082063
254 Ga0496119_0004323
255 Ga0496122_0018878
256 Ga0496122_0120147
257 Ga0496123_0048357
258 Ga0496124_0050257
259 Ga0496125_0005689
260 Ga0496126_0002714
261 Ga0501306_001497
262 Ga0501343_000106
263 Ga0501344_00032
264 Ga0501345_00158
265 Ga0501305_000251
266 Ga0501307_001061
267 Ga0501311_000178
268 Ga0501313_000145
269 Ga0501315_000344
270 Ga0501316_000138
271 Ga0501316_000573
272 Ga0501316_000987
273 Ga0501317_000083
274 Ga0501317_000246
275 Ga0501318_000178
276 Ga0501321_000100
277 Ga0501332_00143
278 Ga0501334_00242
279 Ga0501335_000108
280 Ga0501336_000135
281 Ga0501337_000099
282 Ga0501337_000125
283 2971417488
284 2511701061
285 2512637365
286 2512733979
287 2540608260
288 2545559670
289 2555471003
290 2563930696
291 2573040677
292 2578337161
293 2578930629
294 2587742451
295 2595315449
296 2600199893
297 2600402005
298 2621275461
299 2631983625
300 2643736411
301 2644427180
302 2644717182
303 2644725994
304 2644740294
305 2651530678
306 2672335789
307 2673818253
308 2674422000
309 2686997039
310 2687498345
311 2695629016
312 2717915287
313 2739232732
314 2809053390
315 2812316229
316 2816864880
317 2817479450
318 2819569839
319 2819668598
320 2819710593
321 2819724984
322 2821113240
323 2823528199
324 2842683737
325 2842883363
326 2849142296
327 2852675562
328 2857458579
329 2857475351
330 2857581816
331 2860841053
332 2864739020
333 2864998427
334 2877771948
335 2880172787
336 2881637518
337 2885526493
338 2888581700
339 2889045253
340 2889049651
341 2889298795
342 2897113064
343 2904165043
344 2904492127
345 2904525964
346 2904561383
347 2904757572
348 2907203236
349 2908665527
350 2915598228
351 2919094373
352 2919145446
353 2919161356
354 2919419654
355 2919426816
356 2919517385
357 2919721767
358 2919730489
359 2925329181
360 2928094474
361 2929007004
362 2929189774
363 2931388687
364 2939682768
365 2945992739
366 2946055488
367 2954774277
368 2960321641
369 2960378993
370 2962294287
371 2969140262
372 2969144501
373 2969768964
374 2969771292
375 2971511636
376 2971896621
377 2977257767
378 2980182054
379 2980185208
380 2980496048
381 2981288165
382 2981292987
383 2981983869
384 2981988791
385 2984529558
386 2984535665
387 2990278791
388 3001892592
389 3006859775
390 3006882789
391 8022633213
392 8022657076
393 8022893230
394 8022920437
395 8022953091
396 8051954437
397 8052175480
398 8054282202
399 8054797471
400 8056540179

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00258

Flavodoxin_1

Flavodoxin

88

219

0.94

PF00667

FAD_binding_1

FAD binding domain

251

451

0.91

PF00175

NAD_binding_1

Oxidoreductase NAD-binding domain

484

591

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ykg-assembly1.cif.gz_A solution structure of the flavodoxin-like domain from the escherichia coli sulfite reductase 0.9814 69 209
4h2d-assembly2.cif.gz_B crystal structure of ndor1 0.9601 67 209
1ykg-assembly1.cif.gz_A solution structure of the flavodoxin-like domain from the escherichia coli sulfite reductase 0.9419 69 209
3hr4-assembly2.cif.gz_C human inos reductase and calmodulin complex 0.9418 67 211
1b1c-assembly1.cif.gz_A crystal structure of the fmn-binding domain of human cytochrome p450 reductase at 1.93a resolution 0.9323 68 209
ID Description Score Start End Superfamily
1ykgA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9814 69 209 3.40.50.360
af_P47169_676_836_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9659 67 209 3.40.50.360
af_Q5AD27_2_162_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9626 67 209 3.40.50.360
af_Q54JL0_1_160_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9606 65 209 3.40.50.360
af_Q6NPS8_1_163_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9595 65 211 3.40.50.360
ID Description Score Start End GO Terms
AF-A0A7X5SCJ1-F1-model_v4 Assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.9925 104 193 GO:0005829
GO:0010181
GO:0016491
GO:0050660
AF-A0A0F8YWZ4-F1-model_v4 Flavodoxin-like domain-containing protein 0.9918 67 191 GO:0005829
GO:0005886
GO:0010181
GO:0015075
GO:0016491
GO:0050660
AF-A0A2E4X2E1-F1-model_v4 Sulfite reductase [NADPH] flavoprotein alpha-component 0.9813 67 211 GO:0005829
GO:0010181
GO:0016491
GO:0050660
AF-R7DZX0-F1-model_v4 deleted 0.9701 68 210
AF-A0A0B0HFZ8-F1-model_v4 deleted 0.97 271 606

Map