F307792

General Info

Members Datasets Scaffolds Average Seq Length
200 139 400 294

Family's Representative Sequence

Representative Sequence 3300049744|Ga0501083_0073773|Ga0501083_0073773_1164_2216
Length 350
Sequence MLQSTQHDITRRFIRSGGIVNVRESSVTTAPKHRPPLDTLIRDSYTSPFSLEKGLAFPMIDNAIDKASSLVEALSYIQRFHNKVVVVKVGGSIMDDEAALSTIMTDIVFMNYVGMQPILVHGGGKAINQAMEAAGLVPQMVLGRRYTDERTLAIAEHVLCNQINKFIVNFIQSQGCEAMGLHSLSSVVLFAEKTYVQQPDGRRVDLGYVGEVTGVNARLLQLLVQADSIPCIATIARDAAGGKLNVNADTAAGAVAAAMKAEKFVVVSDTHGIRKDVHDPATRISHLTVGQIDEMVKAGTITSGMLPKVEACVTALRGGVAKAHIIDGRIPHSLLLEIYTEAGIGTEIVL

Samples

Sample ID Description Type Environment
1 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
73 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
87 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
88 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
99 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
125 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.5
Metatranscriptomes 0.5
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.5
Rhizosphere 96
Stem 0
Stem Tuber 0
Unclassified 4.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501083_0073773 3300049744 Bacteria 2268
2 JGI25405J52794_10013572 3300003911 Bacteria 1582
3 Ga0058860_11775987 3300004801 Bacteria 2991
4 Ga0065704_10094299 3300005289 Bacteria 2550
5 Ga0070670_100283849 3300005331 Bacteria 1446
6 Ga0070680_100108159 3300005336 Bacteria 2313
7 Ga0068868_100387108 3300005338 Bacteria 1204
8 Ga0070669_100189054 3300005353 Bacteria 1614
9 Ga0070669_100212744 3300005353 Bacteria 1526
10 Ga0070675_100034140 3300005354 Bacteria 4127
11 Ga0070671_100040692 3300005355 Bacteria 3861
12 Ga0070708_100215429 3300005445 Bacteria 1800
13 Ga0070708_100395634 3300005445 Bacteria 1303
14 Ga0070708_100433735 3300005445 Bacteria 1239
15 Ga0070681_10093651 3300005458 Bacteria 2953
16 Ga0070706_100033882 3300005467 Bacteria 4714
17 Ga0070706_100473408 3300005467 Bacteria 1165
18 Ga0070698_100420427 3300005471 Bacteria 1271
19 Ga0070679_100132837 3300005530 Bacteria 2470
20 Ga0070684_100374089 3300005535 Bacteria 1312
21 Ga0070697_100099345 3300005536 Bacteria 2416
22 Ga0070696_100061215 3300005546 Bacteria 2633
23 Ga0070665_100001174 3300005548 Bacteria 32089
24 Ga0070704_100288778 3300005549 Bacteria 1362
25 Ga0070664_100565762 3300005564 Bacteria 1052
26 Ga0068857_100001650 3300005577 Bacteria 17913
27 Ga0068856_100500660 3300005614 Bacteria 1236
28 Ga0068858_100374032 3300005842 Bacteria 1367
29 Ga0068860_100019729 3300005843 Bacteria 6536
30 Ga0068860_100059098 3300005843 Bacteria 3646
31 Ga0068862_100254805 3300005844 Bacteria 1600
32 Ga0081455_10000430 3300005937 Bacteria 55073
33 Ga0081538_10000978 3300005981 Bacteria 30449
34 Ga0081540_1008145 3300005983 Bacteria 7352
35 Ga0081539_10005009 3300005985 Bacteria 13978
36 Ga0075428_100021208 3300006844 Bacteria 7194
37 Ga0075430_100000341 3300006846 Bacteria 33734
38 Ga0075430_100019213 3300006846 Bacteria 5809
39 Ga0075430_100112381 3300006846 Bacteria 2271
40 Ga0075431_100007111 3300006847 Bacteria 11119
41 Ga0075431_100078095 3300006847 Unclassified 3417
42 Ga0075431_100217859 3300006847 Bacteria 1948
43 Ga0075431_100297011 3300006847 Bacteria 1632
44 Ga0075429_100192307 3300006880 Bacteria 1787
45 Ga0105240_10043830 3300009093 Bacteria 5689
46 Ga0111539_10003273 3300009094 Bacteria 21409
47 Ga0111539_10094565 3300009094 Bacteria 3511
48 Ga0111539_10852327 3300009094 Bacteria 1060
49 Ga0105245_10045923 3300009098 Bacteria 3902
50 Ga0114129_10060245 3300009147 Bacteria 5307
51 Ga0105241_10288479 3300009174 Bacteria 1404
52 Ga0105242_10266011 3300009176 Bacteria 1551
53 Ga0105248_10417177 3300009177 Bacteria 1511
54 Ga0105249_10048709 3300009553 Bacteria 3863
55 Ga0105239_10077126 3300010375 Bacteria 3667
56 Ga0157373_10056438 3300013100 Bacteria 2789
57 Ga0157370_10058345 3300013104 Bacteria 3669
58 Ga0157369_10061870 3300013105 Bacteria 4034
59 Ga0157369_10095554 3300013105 Bacteria 3171
60 Ga0157369_10225184 3300013105 Bacteria 1962
61 Ga0157369_10296872 3300013105 Bacteria 1681
62 Ga0163162_10049981 3300013306 Bacteria 4192
63 Ga0163162_10300227 3300013306 Bacteria 1738
64 Ga0163162_10322033 3300013306 Bacteria 1678
65 Ga0157372_10035303 3300013307 Bacteria 5504
66 Ga0157372_10283874 3300013307 Bacteria 1925
67 Ga0157372_10298465 3300013307 Bacteria 1874
68 Ga0157372_10351381 3300013307 Bacteria 1717
69 Ga0157375_10049534 3300013308 Bacteria 4117
70 Ga0163163_10045411 3300014325 Bacteria 4311
71 Ga0157377_10242824 3300014745 Bacteria 1163
72 Ga0207705_10009408 3300025909 Bacteria 7104
73 Ga0207705_10336966 3300025909 Bacteria 1161
74 Ga0207684_10016534 3300025910 Bacteria 6333
75 Ga0207684_10136832 3300025910 Bacteria 2104
76 Ga0207654_10149212 3300025911 Bacteria 1499
77 Ga0207695_10000216 3300025913 Bacteria 155193
78 Ga0207660_10101015 3300025917 Bacteria 2154
79 Ga0207657_10074198 3300025919 Bacteria 2873
80 Ga0207652_10118904 3300025921 Bacteria 2349
81 Ga0207681_10207402 3300025923 Bacteria 1508
82 Ga0207681_10311261 3300025923 Bacteria 1249
83 Ga0207664_10504152 3300025929 Bacteria 1084
84 Ga0207644_10396161 3300025931 Bacteria 1128
85 Ga0207706_10122328 3300025933 Bacteria 2289
86 Ga0207711_10164374 3300025941 Bacteria 2011
87 Ga0207661_10030694 3300025944 Bacteria 4143
88 Ga0207703_10049005 3300026035 Bacteria 3413
89 Ga0207702_10585275 3300026078 Unclassified 1094
90 Ga0207674_10003137 3300026116 Bacteria 20377
91 Ga0207428_10031758 3300027907 Bacteria 4352
92 Ga0268266_10001195 3300028379 Bacteria 32055
93 Ga0268265_10190308 3300028380 Bacteria 1771
94 Ga0268264_10111518 3300028381 Bacteria 2396
95 Ga0265336_10015724 3300028666 Bacteria 2484
96 Ga0265339_10002497 3300031249 Bacteria 13140
97 Ga0265327_10000041 3300031251 Bacteria 288506
98 Ga0265314_10136391 3300031711 Bacteria 1523
99 Ga0316576_10017498 3300031727 Bacteria 4872
100 Ga0307410_10037356 3300031852 Bacteria 3172
101 Ga0307410_10210098 3300031852 Bacteria 1491
102 Ga0316574_0002418 3300035398 Bacteria 9367
103 Ga0316574_0074711 3300035398 Bacteria 2145
104 Ga0316574_0124774 3300035398 Bacteria 1654
105 Ga0373933_0072751 3300035724 Bacteria 2094
106 Ga0373937_0067813 3300036401 Bacteria 3288
107 Ga0316582_0015026 3300036647 Bacteria 4412
108 Ga0316582_0034825 3300036647 Bacteria 3104
109 Ga0395900_0138489 3300037418 Bacteria 2493
110 Ga0395905_0576205 3300037471 Bacteria 1027
111 Ga0400489_37026 3300039093 Bacteria 3954
112 Ga0436365_1218316 3300039437 Archaea 1099
113 Ga0439450_006640 3300042008 Bacteria 2091
114 Ga0439446_0047284 3300042156 Bacteria 1280
115 Ga0439460_0031804 3300042461 Bacteria 1508
116 Ga0451577_0009943 3300042876 Bacteria 9120
117 Ga0451576_0000330 3300045051 Bacteria 114680
118 Ga0451576_0062173 3300045051 Bacteria 3893
119 Ga0495629_0054810 3300046459 Bacteria 2789
120 Ga0495639_0026260 3300046475 Bacteria 2573
121 Ga0495630_0036470 3300046517 Bacteria 3676
122 Ga0495667_0064897 3300046559 Bacteria 2388
123 Ga0495667_0229065 3300046559 Bacteria 1185
124 Ga0495635_0236465 3300046663 Unclassified 1233
125 Ga0495646_0121602 3300046680 Unclassified 1477
126 Ga0495613_0007877 3300046689 Bacteria 7921
127 Ga0495624_0002507 3300046690 Bacteria 13921
128 Ga0495581_0113197 3300047315 Bacteria 1578
129 Ga0495674_0293495 3300047319 Bacteria 1329
130 Ga0495676_0111642 3300047321 Bacteria 2005
131 Ga0495684_0053730 3300047471 Bacteria 3074
132 Ga0495684_0079817 3300047471 Unclassified 2484
133 Ga0495686_0020206 3300047472 Bacteria 4443
134 Ga0496104_0272520 3300048907 Bacteria 1605
135 Ga0496110_0150640 3300048913 Bacteria 2106
136 Ga0496114_0008348 3300048917 Bacteria 8205
137 Ga0496126_0003639 3300048929 Bacteria 19260
138 Ga0496126_0031682 3300048929 Bacteria 4990
139 Ga0501032_0141058 3300049569 Bacteria 1587
140 Ga0501034_0002204 3300049571 Bacteria 24104
141 Ga0501036_0116365 3300049572 Bacteria 2258
142 Ga0501038_0166809 3300049574 Bacteria 1785
143 Ga0501039_0077751 3300049575 Bacteria 2581
144 Ga0501040_0068519 3300049576 Bacteria 2447
145 Ga0501040_0216954 3300049576 Bacteria 1361
146 Ga0501047_0126391 3300049581 Bacteria 2437
147 Ga0501048_0072553 3300049582 Bacteria 2430
148 Ga0501068_0211305 3300049584 Bacteria 1232
149 Ga0501070_0194481 3300049586 Bacteria 1666
150 Ga0501071_0127556 3300049587 Bacteria 1889
151 Ga0501072_0024616 3300049588 Bacteria 4685
152 Ga0501072_0055941 3300049588 Bacteria 3109
153 Ga0501073_0000060 3300049589 Bacteria 68976
154 Ga0501074_0176493 3300049590 Bacteria 1525
155 Ga0501076_0009687 3300049592 Bacteria 7116
156 Ga0501076_0083538 3300049592 Bacteria 2564
157 Ga0501076_0115591 3300049592 Unclassified 2171
158 Ga0501076_0137040 3300049592 Bacteria 1987
159 Ga0501077_0012122 3300049593 Bacteria 5396
160 Ga0501077_0150502 3300049593 Bacteria 1477
161 Ga0501079_0036871 3300049741 Bacteria 3766
162 Ga0501079_0062517 3300049741 Bacteria 2872
163 Ga0501080_0019479 3300049742 Bacteria 6284
164 Ga0501080_0044723 3300049742 Bacteria 4122
165 Ga0501080_0048981 3300049742 Bacteria 3932
166 Ga0501080_0111513 3300049742 Bacteria 2536
167 Ga0501081_0253299 3300049743 Bacteria 1285
168 Ga0501081_0280067 3300049743 Bacteria 1221
169 Ga0501083_0023022 3300049744 Bacteria 4323
170 Ga0501083_0247833 3300049744 Bacteria 1160
171 Ga0501044_0000139 3300049823 Bacteria 88706
172 Ga0501044_0138936 3300049823 Bacteria 2418
173 Ga0501044_0480470 3300049823 Bacteria 1146
174 Ga0501045_0254137 3300049824 Bacteria 1308
175 Ga0501045_0267271 3300049824 Bacteria 1273
176 nmdc:mga05p37_63298_c1 3300050507 Unclassified 4552
177 nmdc:mga05p37_66366_c1 3300050507 Bacteria 4439
178 nmdc:mga09592_17004_c1 3300050508 Bacteria 5952
179 nmdc:mga09592_193625_c1 3300050508 Bacteria 1760
180 nmdc:mga09592_37316_c1 3300050508 Bacteria 4076
181 nmdc:mga0qj67_16089_c1 3300050509 Bacteria 5666
182 nmdc:mga0qj67_230570_c1 3300050509 Bacteria 1502
183 nmdc:mga0qj67_3646_c1 3300050509 Bacteria 11112
184 nmdc:mga06r32_16951_c1 3300050510 Bacteria 6646
185 nmdc:mga06r32_222901_c1 3300050510 Bacteria 1874
186 nmdc:mga06r32_70550_c1 3300050510 Bacteria 3379
187 nmdc:mga08y16_40037_c1 3300050511 Bacteria 4914
188 nmdc:mga08y16_648343_c1 3300050511 Bacteria 1060
189 nmdc:mga08y16_80150_c1 3300050511 Bacteria 3404
190 nmdc:mga0n895_462502_c1 3300050512 Unclassified 1280
191 Ga0495655_0003794 3300053083 Bacteria 2528
192 Ga0495619_0329886 3300053085 Bacteria 1056
193 Ga0501084_0250730 3300054114 Bacteria 1494
194 Ga0501082_0028970 3300060353 Bacteria 4770
195 Ga0501082_0145963 3300060353 Bacteria 2054
196 Ga0501082_0383573 3300060353 Bacteria 1226
197 Ga0530510_0106828 3300061734 Bacteria 2048
198 Ga0530510_0252587 3300061734 Unclassified 1314
199 Ga0530510_0303349 3300061734 Bacteria 1195
200 Ga0530510_0320126 3300061734 Bacteria 1162
201 Ga0501083_0073773
202 JGI25405J52794_10013572
203 Ga0058860_11775987
204 Ga0065704_10094299
205 Ga0070670_100283849
206 Ga0070680_100108159
207 Ga0068868_100387108
208 Ga0070669_100189054
209 Ga0070669_100212744
210 Ga0070675_100034140
211 Ga0070671_100040692
212 Ga0070708_100215429
213 Ga0070708_100395634
214 Ga0070708_100433735
215 Ga0070681_10093651
216 Ga0070706_100033882
217 Ga0070706_100473408
218 Ga0070698_100420427
219 Ga0070679_100132837
220 Ga0070684_100374089
221 Ga0070697_100099345
222 Ga0070696_100061215
223 Ga0070665_100001174
224 Ga0070704_100288778
225 Ga0070664_100565762
226 Ga0068857_100001650
227 Ga0068856_100500660
228 Ga0068858_100374032
229 Ga0068860_100019729
230 Ga0068860_100059098
231 Ga0068862_100254805
232 Ga0081455_10000430
233 Ga0081538_10000978
234 Ga0081540_1008145
235 Ga0081539_10005009
236 Ga0075428_100021208
237 Ga0075430_100000341
238 Ga0075430_100019213
239 Ga0075430_100112381
240 Ga0075431_100007111
241 Ga0075431_100078095
242 Ga0075431_100217859
243 Ga0075431_100297011
244 Ga0075429_100192307
245 Ga0105240_10043830
246 Ga0111539_10003273
247 Ga0111539_10094565
248 Ga0111539_10852327
249 Ga0105245_10045923
250 Ga0114129_10060245
251 Ga0105241_10288479
252 Ga0105242_10266011
253 Ga0105248_10417177
254 Ga0105249_10048709
255 Ga0105239_10077126
256 Ga0157373_10056438
257 Ga0157370_10058345
258 Ga0157369_10061870
259 Ga0157369_10095554
260 Ga0157369_10225184
261 Ga0157369_10296872
262 Ga0163162_10049981
263 Ga0163162_10300227
264 Ga0163162_10322033
265 Ga0157372_10035303
266 Ga0157372_10283874
267 Ga0157372_10298465
268 Ga0157372_10351381
269 Ga0157375_10049534
270 Ga0163163_10045411
271 Ga0157377_10242824
272 Ga0207705_10009408
273 Ga0207705_10336966
274 Ga0207684_10016534
275 Ga0207684_10136832
276 Ga0207654_10149212
277 Ga0207695_10000216
278 Ga0207660_10101015
279 Ga0207657_10074198
280 Ga0207652_10118904
281 Ga0207681_10207402
282 Ga0207681_10311261
283 Ga0207664_10504152
284 Ga0207644_10396161
285 Ga0207706_10122328
286 Ga0207711_10164374
287 Ga0207661_10030694
288 Ga0207703_10049005
289 Ga0207702_10585275
290 Ga0207674_10003137
291 Ga0207428_10031758
292 Ga0268266_10001195
293 Ga0268265_10190308
294 Ga0268264_10111518
295 Ga0265336_10015724
296 Ga0265339_10002497
297 Ga0265327_10000041
298 Ga0265314_10136391
299 Ga0316576_10017498
300 Ga0307410_10037356
301 Ga0307410_10210098
302 Ga0316574_0002418
303 Ga0316574_0074711
304 Ga0316574_0124774
305 Ga0373933_0072751
306 Ga0373937_0067813
307 Ga0316582_0015026
308 Ga0316582_0034825
309 Ga0395900_0138489
310 Ga0395905_0576205
311 Ga0400489_37026
312 Ga0436365_1218316
313 Ga0439450_006640
314 Ga0439446_0047284
315 Ga0439460_0031804
316 Ga0451577_0009943
317 Ga0451576_0000330
318 Ga0451576_0062173
319 Ga0495629_0054810
320 Ga0495639_0026260
321 Ga0495630_0036470
322 Ga0495667_0064897
323 Ga0495667_0229065
324 Ga0495635_0236465
325 Ga0495646_0121602
326 Ga0495613_0007877
327 Ga0495624_0002507
328 Ga0495581_0113197
329 Ga0495674_0293495
330 Ga0495676_0111642
331 Ga0495684_0053730
332 Ga0495684_0079817
333 Ga0495686_0020206
334 Ga0496104_0272520
335 Ga0496110_0150640
336 Ga0496114_0008348
337 Ga0496126_0003639
338 Ga0496126_0031682
339 Ga0501032_0141058
340 Ga0501034_0002204
341 Ga0501036_0116365
342 Ga0501038_0166809
343 Ga0501039_0077751
344 Ga0501040_0068519
345 Ga0501040_0216954
346 Ga0501047_0126391
347 Ga0501048_0072553
348 Ga0501068_0211305
349 Ga0501070_0194481
350 Ga0501071_0127556
351 Ga0501072_0024616
352 Ga0501072_0055941
353 Ga0501073_0000060
354 Ga0501074_0176493
355 Ga0501076_0009687
356 Ga0501076_0083538
357 Ga0501076_0115591
358 Ga0501076_0137040
359 Ga0501077_0012122
360 Ga0501077_0150502
361 Ga0501079_0036871
362 Ga0501079_0062517
363 Ga0501080_0019479
364 Ga0501080_0044723
365 Ga0501080_0048981
366 Ga0501080_0111513
367 Ga0501081_0253299
368 Ga0501081_0280067
369 Ga0501083_0023022
370 Ga0501083_0247833
371 Ga0501044_0000139
372 Ga0501044_0138936
373 Ga0501044_0480470
374 Ga0501045_0254137
375 Ga0501045_0267271
376 nmdc:mga05p37_63298_c1
377 nmdc:mga05p37_66366_c1
378 nmdc:mga09592_17004_c1
379 nmdc:mga09592_193625_c1
380 nmdc:mga09592_37316_c1
381 nmdc:mga0qj67_16089_c1
382 nmdc:mga0qj67_230570_c1
383 nmdc:mga0qj67_3646_c1
384 nmdc:mga06r32_16951_c1
385 nmdc:mga06r32_222901_c1
386 nmdc:mga06r32_70550_c1
387 nmdc:mga08y16_40037_c1
388 nmdc:mga08y16_648343_c1
389 nmdc:mga08y16_80150_c1
390 nmdc:mga0n895_462502_c1
391 Ga0495655_0003794
392 Ga0495619_0329886
393 Ga0501084_0250730
394 Ga0501082_0028970
395 Ga0501082_0145963
396 Ga0501082_0383573
397 Ga0530510_0106828
398 Ga0530510_0252587
399 Ga0530510_0303349
400 Ga0530510_0320126

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00696

AA_kinase

Amino acid kinase family

83

327

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2buf-assembly2.cif.gz_I arginine feed-back inhibitable acetylglutamate kinase 0.9682 1 295
2buf-assembly1.cif.gz_D arginine feed-back inhibitable acetylglutamate kinase 0.9661 1 295
2buf-assembly2.cif.gz_I arginine feed-back inhibitable acetylglutamate kinase 0.9617 1 295
2buf-assembly2.cif.gz_H arginine feed-back inhibitable acetylglutamate kinase 0.9603 1 293
2buf-assembly2.cif.gz_J arginine feed-back inhibitable acetylglutamate kinase 0.9547 2 295
ID Description Score Start End Superfamily
1uvdA00 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.9494 1 295 3.40.1160.10
af_P9WQ01_4_294_3.40.1160.10 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.9483 6 295 3.40.1160.10
1uvdA00 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.9463 1 295 3.40.1160.10
2v5hF00 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.9425 11 294 3.40.1160.10
af_Q2G1H6_1_252_3.40.1160.10 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.9378 26 294 3.40.1160.10
ID Description Score Start End GO Terms
AF-A0A1Q7SFG4-F1-model_v4 acetylglutamate kinase (EC 2.7.2.8) 0.9913 163 295 GO:0003991
GO:0005524
GO:0006526
AF-A0A529SS59-F1-model_v4 acetylglutamate kinase (EC 2.7.2.8) 0.9844 4 127 GO:0003991
GO:0006526
AF-A0A1Q7SFG4-F1-model_v4 acetylglutamate kinase (EC 2.7.2.8) 0.984 163 295 GO:0003991
GO:0005524
GO:0006526
AF-W0DPU7-F1-model_v4 Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (NAGK) 0.9835 1 294 GO:0003991
GO:0005524
GO:0005737
GO:0006526
GO:0042450
AF-A0A6J0M6Q6-F1-model_v4 Acetylglutamate kinase, chloroplastic-like 0.9812 8 132 GO:0003991
GO:0005524
GO:0006526
GO:0009534

Map