F307703
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 200 | 146 | 199 | 524 |
Family's Representative Sequence
| Representative Sequence | 3300048915|Ga0496112_0036971|Ga0496112_0036971_688_2235 |
| Length | 497 |
| Sequence | MATIPTTRIQEVEAQILTPEATQFLTRLANEFEPRRRDLISRRLVRQKEIDAGAMPTFLLETARIREADWTVAPIPHDLLDRRVEITGPVERKMIINALNSGANVFMADFEDSNSPTWTNNIEGQSNLRDAVEGSIRYTSPEGKRYMLNPTVATLMVRPRGWHLVERHFLVSGKPISASLFDFGLFFFHNAQRLIQKGSGPYFYLPKLESHLEARLWNDVFCFAQDELGIPRATIRATVLIETILAAFEMDEILYELKEHSAGLNCGRWDYIFSFIKKFRNHPNFVLPNRSIVTMEKHFLKSYVDLLIQTCHRRGIHAMGGMAAQIPIKNDVRAGHDGTWVAHPGLVPLAKEVFDSQMKEANQIARRRDDVRITSQDLVAVPEGEITEQGLRWNIDVGLQYLESWLRGSGCVPIYNLMEDAATAEICRSQVWQWVRHQATLADGRRVTQEMVHQIVMDEKNKLNGGRMAEAAEIFGRMMTSPDITEFLTLEAYDYLD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2857460504 | Brevibacillus sp. R-74223 | Isolate | Unclassified |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 4 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 5 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 7 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 9 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 11 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 12 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 13 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 14 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 20 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 21 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 22 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 23 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 24 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 25 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 40 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 41 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 42 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 60 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 61 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 62 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 63 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 64 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 65 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 66 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 67 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 68 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 69 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 70 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 71 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 72 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 73 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 74 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 75 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 76 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 77 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 78 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 79 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 80 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 81 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 110 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 111 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 122 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 138 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 144 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 146 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.5 |
| Metatranscriptomes | 0 |
| Isolates | 0.5 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 1.5 |
| Rhizosphere | 96 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.5 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100065394 | 3300005329 | Bacteria | 3386 |
| 2 | Ga0068868_100013022 | 3300005338 | Bacteria | 6088 |
| 3 | Ga0070709_10013198 | 3300005434 | Bacteria | 4638 |
| 4 | Ga0070714_100001597 | 3300005435 | Bacteria | 16483 |
| 5 | Ga0070714_100007470 | 3300005435 | Bacteria | 8509 |
| 6 | Ga0070713_100011771 | 3300005436 | Bacteria | 6390 |
| 7 | Ga0070713_100024419 | 3300005436 | Bacteria | 4707 |
| 8 | Ga0070713_100058540 | 3300005436 | Bacteria | 3214 |
| 9 | Ga0070713_100135285 | 3300005436 | Bacteria | 2177 |
| 10 | Ga0070711_100007804 | 3300005439 | Bacteria | 6519 |
| 11 | Ga0070679_100010751 | 3300005530 | Bacteria | 8691 |
| 12 | Ga0070665_100022769 | 3300005548 | Bacteria | 6307 |
| 13 | Ga0068855_100007134 | 3300005563 | Bacteria | 13556 |
| 14 | Ga0068855_100087155 | 3300005563 | Bacteria | 3609 |
| 15 | Ga0068854_100010804 | 3300005578 | Bacteria | 5925 |
| 16 | Ga0068854_100059304 | 3300005578 | Bacteria | 2765 |
| 17 | Ga0068851_10002195 | 3300005834 | Bacteria | 8586 |
| 18 | Ga0068863_100018465 | 3300005841 | Bacteria | 6674 |
| 19 | Ga0070717_10001159 | 3300006028 | Bacteria | 17797 |
| 20 | Ga0070717_10017582 | 3300006028 | Bacteria | 5567 |
| 21 | Ga0070715_10042108 | 3300006163 | Bacteria | 1918 |
| 22 | Ga0070716_100000095 | 3300006173 | Bacteria | 34398 |
| 23 | Ga0070716_100001911 | 3300006173 | Bacteria | 9469 |
| 24 | Ga0070712_100001334 | 3300006175 | Bacteria | 14962 |
| 25 | Ga0070712_100003969 | 3300006175 | Bacteria | 9100 |
| 26 | Ga0097621_100017550 | 3300006237 | Bacteria | 5438 |
| 27 | Ga0097621_100049892 | 3300006237 | Bacteria | 3402 |
| 28 | Ga0068871_100019266 | 3300006358 | Bacteria | 5208 |
| 29 | Ga0075433_10079508 | 3300006852 | Bacteria | 2889 |
| 30 | Ga0075434_100001926 | 3300006871 | Bacteria | 17999 |
| 31 | Ga0075434_100015937 | 3300006871 | Bacteria | 7221 |
| 32 | Ga0075436_100006664 | 3300006914 | Bacteria | 7910 |
| 33 | Ga0075435_100024735 | 3300007076 | Bacteria | 4665 |
| 34 | Ga0099794_10000192 | 3300007265 | Bacteria | 22190 |
| 35 | Ga0105240_10001780 | 3300009093 | Bacteria | 36357 |
| 36 | Ga0105240_10002133 | 3300009093 | Bacteria | 32316 |
| 37 | Ga0105240_10033103 | 3300009093 | Bacteria | 6683 |
| 38 | Ga0105245_10005180 | 3300009098 | Bacteria | 11451 |
| 39 | Ga0105241_10086694 | 3300009174 | Bacteria | 2463 |
| 40 | Ga0105242_10039083 | 3300009176 | Bacteria | 3818 |
| 41 | Ga0105248_10050397 | 3300009177 | Bacteria | 4669 |
| 42 | Ga0105237_10044888 | 3300009545 | Bacteria | 4450 |
| 43 | Ga0105238_10024982 | 3300009551 | Bacteria | 6090 |
| 44 | Ga0105239_10104354 | 3300010375 | Bacteria | 3138 |
| 45 | Ga0157370_10027828 | 3300013104 | Bacteria | 5571 |
| 46 | Ga0157374_10020358 | 3300013296 | Bacteria | 5884 |
| 47 | Ga0157374_10038193 | 3300013296 | Bacteria | 4412 |
| 48 | Ga0157378_10003780 | 3300013297 | Bacteria | 13413 |
| 49 | Ga0157372_10049434 | 3300013307 | Bacteria | 4676 |
| 50 | Ga0163163_10041432 | 3300014325 | Bacteria | 4502 |
| 51 | Ga0157379_10213465 | 3300014968 | Bacteria | 1747 |
| 52 | Ga0182006_1046464 | 3300015261 | Bacteria | 1686 |
| 53 | Ga0182007_10005223 | 3300015262 | Bacteria | 5739 |
| 54 | Ga0213874_10012394 | 3300021377 | Bacteria | 2187 |
| 55 | Ga0207685_10012115 | 3300025905 | Bacteria | 2620 |
| 56 | Ga0207684_10095375 | 3300025910 | Bacteria | 2538 |
| 57 | Ga0207695_10003207 | 3300025913 | Bacteria | 23305 |
| 58 | Ga0207695_10087572 | 3300025913 | Bacteria | 3137 |
| 59 | Ga0207693_10000193 | 3300025915 | Bacteria | 55368 |
| 60 | Ga0207693_10014453 | 3300025915 | Bacteria | 6347 |
| 61 | Ga0207663_10002252 | 3300025916 | Bacteria | 9227 |
| 62 | Ga0207649_10129599 | 3300025920 | Bacteria | 1711 |
| 63 | Ga0207694_10114673 | 3300025924 | Bacteria | 2146 |
| 64 | Ga0207687_10017686 | 3300025927 | Bacteria | 4698 |
| 65 | Ga0207664_10039421 | 3300025929 | Bacteria | 3668 |
| 66 | Ga0207664_10087489 | 3300025929 | Bacteria | 2547 |
| 67 | Ga0207704_10086798 | 3300025938 | Bacteria | 2042 |
| 68 | Ga0207665_10000888 | 3300025939 | Bacteria | 20184 |
| 69 | Ga0207665_10006009 | 3300025939 | Bacteria | 8065 |
| 70 | Ga0207661_10011428 | 3300025944 | Bacteria | 6433 |
| 71 | Ga0207661_10111060 | 3300025944 | Bacteria | 2319 |
| 72 | Ga0207677_10006917 | 3300026023 | Bacteria | 6235 |
| 73 | Ga0207702_10059247 | 3300026078 | Bacteria | 3261 |
| 74 | Ga0207641_10133814 | 3300026088 | Bacteria | 2229 |
| 75 | Ga0207674_10131511 | 3300026116 | Bacteria | 2465 |
| 76 | Ga0209588_1000134 | 3300027671 | Bacteria | 21361 |
| 77 | Ga0265338_10000906 | 3300028800 | Bacteria | 49899 |
| 78 | Ga0265325_10008457 | 3300031241 | Bacteria | 6072 |
| 79 | Ga0265331_10005038 | 3300031250 | Bacteria | 8086 |
| 80 | Ga0265316_10014573 | 3300031344 | Bacteria | 6913 |
| 81 | Ga0307408_100008106 | 3300031548 | Bacteria | 6945 |
| 82 | Ga0265342_10004172 | 3300031712 | Bacteria | 11500 |
| 83 | Ga0307415_100000129 | 3300032126 | Bacteria | 32651 |
| 84 | Ga0373935_0022052 | 3300035692 | Bacteria | 3901 |
| 85 | Ga0373927_0007238 | 3300035695 | Bacteria | 7528 |
| 86 | Ga0373947_0008799 | 3300035725 | Bacteria | 5806 |
| 87 | Ga0373937_0035852 | 3300036401 | Bacteria | 4517 |
| 88 | Ga0373937_0082713 | 3300036401 | Bacteria | 2970 |
| 89 | Ga0373925_0001644 | 3300037068 | Bacteria | 18826 |
| 90 | Ga0436364_1216285 | 3300037853 | Bacteria | 2359 |
| 91 | Ga0436364_1287720 | 3300037853 | Bacteria | 22325 |
| 92 | Ga0395901_0064685 | 3300038443 | Bacteria | 3807 |
| 93 | Ga0436363_0713279 | 3300039450 | Bacteria | 2548 |
| 94 | Ga0466969_0000162 | 3300044656 | Bacteria | 36417 |
| 95 | Ga0466972_0011442 | 3300044658 | Bacteria | 4455 |
| 96 | Ga0466966_0001428 | 3300044684 | Bacteria | 15375 |
| 97 | Ga0466964_0002112 | 3300044706 | Bacteria | 7001 |
| 98 | Ga0466968_0000072 | 3300044735 | Bacteria | 29893 |
| 99 | Ga0466970_0000073 | 3300044765 | Bacteria | 40482 |
| 100 | Ga0466959_0021419 | 3300045049 | Bacteria | 4767 |
| 101 | Ga0495629_0060164 | 3300046459 | Bacteria | 2655 |
| 102 | Ga0495651_0000549 | 3300046462 | Bacteria | 28912 |
| 103 | Ga0495651_0006349 | 3300046462 | Bacteria | 9043 |
| 104 | Ga0495651_0066366 | 3300046462 | Bacteria | 2754 |
| 105 | Ga0495653_0008368 | 3300046463 | Bacteria | 8478 |
| 106 | Ga0495580_0001456 | 3300046472 | Bacteria | 20757 |
| 107 | Ga0495580_0003513 | 3300046472 | Bacteria | 13319 |
| 108 | Ga0495580_0015473 | 3300046472 | Bacteria | 5752 |
| 109 | Ga0495580_0035199 | 3300046472 | Bacteria | 3601 |
| 110 | Ga0495582_0000499 | 3300046473 | Bacteria | 21472 |
| 111 | Ga0495664_0007326 | 3300046477 | Bacteria | 6124 |
| 112 | Ga0495608_0025594 | 3300046511 | Bacteria | 4028 |
| 113 | Ga0495608_0118772 | 3300046511 | Bacteria | 1696 |
| 114 | Ga0495618_0077853 | 3300046514 | Bacteria | 2113 |
| 115 | Ga0495618_0126129 | 3300046514 | Bacteria | 1639 |
| 116 | Ga0495628_0000677 | 3300046516 | Bacteria | 31314 |
| 117 | Ga0495628_0002615 | 3300046516 | Bacteria | 16163 |
| 118 | Ga0495628_0005246 | 3300046516 | Bacteria | 11368 |
| 119 | Ga0495628_0069980 | 3300046516 | Bacteria | 2736 |
| 120 | Ga0495630_0029558 | 3300046517 | Bacteria | 4074 |
| 121 | Ga0495666_0076866 | 3300046526 | Bacteria | 1582 |
| 122 | Ga0495652_0033418 | 3300046529 | Bacteria | 4490 |
| 123 | Ga0495652_0059696 | 3300046529 | Bacteria | 3226 |
| 124 | Ga0495665_0001819 | 3300046531 | Bacteria | 11506 |
| 125 | Ga0495586_0004445 | 3300046535 | Bacteria | 7488 |
| 126 | Ga0495587_0005416 | 3300046536 | Bacteria | 8329 |
| 127 | Ga0495587_0020095 | 3300046536 | Bacteria | 4127 |
| 128 | Ga0495645_0088196 | 3300046543 | Bacteria | 2219 |
| 129 | Ga0495667_0007580 | 3300046559 | Bacteria | 7365 |
| 130 | Ga0495667_0020072 | 3300046559 | Bacteria | 4508 |
| 131 | Ga0495667_0093252 | 3300046559 | Bacteria | 1950 |
| 132 | Ga0495657_0071029 | 3300046675 | Bacteria | 2274 |
| 133 | Ga0495599_0016983 | 3300046678 | Bacteria | 4522 |
| 134 | Ga0495623_0032670 | 3300046679 | Bacteria | 3343 |
| 135 | Ga0495623_0056055 | 3300046679 | Bacteria | 2482 |
| 136 | Ga0495646_0004098 | 3300046680 | Bacteria | 9144 |
| 137 | Ga0495646_0021761 | 3300046680 | Bacteria | 4050 |
| 138 | Ga0495613_0052992 | 3300046689 | Bacteria | 2987 |
| 139 | Ga0495600_0001704 | 3300046809 | Bacteria | 12275 |
| 140 | Ga0495604_0003303 | 3300047317 | Bacteria | 12881 |
| 141 | Ga0495674_0010559 | 3300047319 | Bacteria | 8741 |
| 142 | Ga0495674_0019154 | 3300047319 | Bacteria | 6357 |
| 143 | Ga0495674_0020008 | 3300047319 | Bacteria | 6204 |
| 144 | Ga0495674_0048873 | 3300047319 | Bacteria | 3741 |
| 145 | Ga0495674_0060709 | 3300047319 | Bacteria | 3298 |
| 146 | Ga0495674_0083613 | 3300047319 | Bacteria | 2736 |
| 147 | Ga0495680_0000095 | 3300047322 | Bacteria | 80206 |
| 148 | Ga0495680_0000656 | 3300047322 | Bacteria | 38851 |
| 149 | Ga0495675_0000393 | 3300047444 | Bacteria | 30249 |
| 150 | Ga0495675_0007334 | 3300047444 | Bacteria | 6794 |
| 151 | Ga0495675_0030973 | 3300047444 | Bacteria | 3414 |
| 152 | Ga0495684_0001593 | 3300047471 | Bacteria | 18197 |
| 153 | Ga0495684_0013563 | 3300047471 | Bacteria | 6274 |
| 154 | Ga0496104_0085193 | 3300048907 | Bacteria | 3016 |
| 155 | Ga0496112_0036971 | 3300048915 | Bacteria | 4765 |
| 156 | Ga0496112_0044771 | 3300048915 | Bacteria | 4337 |
| 157 | Ga0501031_0002082 | 3300049568 | Bacteria | 12604 |
| 158 | Ga0501032_0033102 | 3300049569 | Bacteria | 3543 |
| 159 | Ga0501033_0002893 | 3300049570 | Bacteria | 14362 |
| 160 | Ga0501033_0041370 | 3300049570 | Bacteria | 3439 |
| 161 | Ga0501034_0027617 | 3300049571 | Bacteria | 5771 |
| 162 | Ga0501036_0020980 | 3300049572 | Bacteria | 5486 |
| 163 | Ga0501037_0000951 | 3300049573 | Bacteria | 21521 |
| 164 | Ga0501038_0004398 | 3300049574 | Bacteria | 13116 |
| 165 | Ga0501039_0003798 | 3300049575 | Bacteria | 11348 |
| 166 | Ga0501040_0000205 | 3300049576 | Bacteria | 34152 |
| 167 | Ga0501041_0001319 | 3300049577 | Bacteria | 13656 |
| 168 | Ga0501042_0027643 | 3300049578 | Bacteria | 3989 |
| 169 | Ga0501043_0000950 | 3300049579 | Bacteria | 25684 |
| 170 | Ga0501046_0018969 | 3300049580 | Bacteria | 5710 |
| 171 | Ga0501046_0053227 | 3300049580 | Bacteria | 3188 |
| 172 | Ga0501047_0044527 | 3300049581 | Bacteria | 4288 |
| 173 | Ga0501068_0000889 | 3300049584 | Bacteria | 15600 |
| 174 | Ga0501071_0002484 | 3300049587 | Bacteria | 11205 |
| 175 | Ga0501072_0000441 | 3300049588 | Bacteria | 29711 |
| 176 | Ga0501074_0046368 | 3300049590 | Bacteria | 3142 |
| 177 | Ga0501075_0000062 | 3300049591 | Bacteria | 46520 |
| 178 | Ga0501076_0000084 | 3300049592 | Bacteria | 49304 |
| 179 | Ga0501076_0013081 | 3300049592 | Bacteria | 6214 |
| 180 | Ga0501077_0002764 | 3300049593 | Bacteria | 10521 |
| 181 | Ga0501079_0001793 | 3300049741 | Bacteria | 15334 |
| 182 | Ga0501079_0028354 | 3300049741 | Bacteria | 4295 |
| 183 | Ga0501080_0008328 | 3300049742 | Bacteria | 9393 |
| 184 | Ga0501080_0098614 | 3300049742 | Bacteria | 2712 |
| 185 | Ga0501081_0000153 | 3300049743 | Bacteria | 31513 |
| 186 | Ga0501035_0033172 | 3300049822 | Bacteria | 4696 |
| 187 | Ga0501035_0054693 | 3300049822 | Bacteria | 3565 |
| 188 | Ga0501045_0011962 | 3300049824 | Bacteria | 6101 |
| 189 | nmdc:mga06r32_88830_c1 | 3300050510 | Bacteria | 3017 |
| 190 | nmdc:mga0n895_465_c1 | 3300050512 | Bacteria | 27165 |
| 191 | nmdc:mga0rr50_54267_c1 | 3300050513 | Bacteria | 2985 |
| 192 | nmdc:mga08x19_118612_c1 | 3300050514 | Bacteria | 1771 |
| 193 | nmdc:mga0a205_28299_c1 | 3300050515 | Bacteria | 5358 |
| 194 | Ga0495612_0004124 | 3300053078 | Bacteria | 6017 |
| 195 | Ga0501084_0001168 | 3300054114 | Bacteria | 20485 |
| 196 | Ga0501082_0000469 | 3300060353 | Bacteria | 35558 |
| 197 | Ga0501082_0004661 | 3300060353 | Bacteria | 11964 |
| 198 | Ga0466962_0057238 | 3300061719 | Bacteria | 1861 |
| 199 | Ga0530510_0006879 | 3300061734 | Bacteria | 7928 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046526 | Ga0495666_0076866 | Ga0495666_0076866_72_1484 | 469 |
| 2 | 3300061719 | Ga0466962_0057238 | Ga0466962_0057238_38_1453 | 469 |
| 3 | 3300050514 | nmdc:mga08x19_118612_c1 | nmdc:mga08x19_118612_c1_275_1708 | 476 |
| 4 | 3300013296 | Ga0157374_10020358 | Ga0157374_100203583 | 494 |
| 5 | 3300048915 | Ga0496112_0036971 | Ga0496112_0036971_688_2235 | 494 |
| 6 | 3300048915 | Ga0496112_0044771 | Ga0496112_0044771_688_2226 | 494 |
| 7 | 3300007076 | Ga0075435_100024735 | Ga0075435_1000247353 | 501 |
| 8 | 3300037068 | Ga0373925_0001644 | Ga0373925_0001644_3177_4748 | 501 |
| 9 | 3300050513 | nmdc:mga0rr50_54267_c1 | nmdc:mga0rr50_54267_c1_183_1697 | 501 |
| 10 | 3300031548 | Ga0307408_100008106 | Ga0307408_1000081062 | 506 |
| 11 | 3300032126 | Ga0307415_100000129 | Ga0307415_1000001299 | 506 |
| 12 | 3300038443 | Ga0395901_0064685 | Ga0395901_0064685_1083_2633 | 506 |
| 13 | 3300050510 | nmdc:mga06r32_88830_c1 | nmdc:mga06r32_88830_c1_803_2353 | 507 |
| 14 | 3300046477 | Ga0495664_0007326 | Ga0495664_0007326_132_1682 | 508 |
| 15 | 3300046516 | Ga0495628_0002615 | Ga0495628_0002615_10152_11702 | 508 |
| 16 | 3300046529 | Ga0495652_0033418 | Ga0495652_0033418_1130_2680 | 508 |
| 17 | 3300046679 | Ga0495623_0032670 | Ga0495623_0032670_1169_2719 | 508 |
| 18 | 3300046680 | Ga0495646_0021761 | Ga0495646_0021761_107_1657 | 508 |
| 19 | 3300047444 | Ga0495675_0030973 | Ga0495675_0030973_1052_2602 | 508 |
| 20 | 3300005435 | Ga0070714_100007470 | Ga0070714_1000074703 | 509 |
| 21 | 3300005436 | Ga0070713_100011771 | Ga0070713_1000117714 | 509 |
| 22 | 3300005563 | Ga0068855_100087155 | Ga0068855_1000871552 | 509 |
| 23 | 3300005578 | Ga0068854_100059304 | Ga0068854_1000593041 | 509 |
| 24 | 3300006852 | Ga0075433_10079508 | Ga0075433_100795082 | 509 |
| 25 | 3300006871 | Ga0075434_100001926 | Ga0075434_1000019263 | 509 |
| 26 | 3300026078 | Ga0207702_10059247 | Ga0207702_100592472 | 509 |
| 27 | 3300050512 | nmdc:mga0n895_465_c1 | nmdc:mga0n895_465_c1_2573_4105 | 509 |
| 28 | 3300050515 | nmdc:mga0a205_28299_c1 | nmdc:mga0a205_28299_c1_2379_3911 | 509 |
| 29 | 3300006237 | Ga0097621_100049892 | Ga0097621_1000498922 | 511 |
| 30 | 3300006871 | Ga0075434_100015937 | Ga0075434_1000159373 | 511 |
| 31 | 3300013307 | Ga0157372_10049434 | Ga0157372_100494342 | 511 |
| 32 | 3300021377 | Ga0213874_10012394 | Ga0213874_100123942 | 511 |
| 33 | 3300039450 | Ga0436363_0713279 | Ga0436363_0713279_429_1970 | 511 |
| 34 | 3300005338 | Ga0068868_100013022 | Ga0068868_1000130222 | 512 |
| 35 | 3300005434 | Ga0070709_10013198 | Ga0070709_100131983 | 512 |
| 36 | 3300005436 | Ga0070713_100024419 | Ga0070713_1000244194 | 512 |
| 37 | 3300005436 | Ga0070713_100058540 | Ga0070713_1000585402 | 512 |
| 38 | 3300005436 | Ga0070713_100135285 | Ga0070713_1001352851 | 512 |
| 39 | 3300005439 | Ga0070711_100007804 | Ga0070711_1000078042 | 512 |
| 40 | 3300006028 | Ga0070717_10017582 | Ga0070717_100175823 | 512 |
| 41 | 3300006173 | Ga0070716_100000095 | Ga0070716_10000009523 | 512 |
| 42 | 3300006175 | Ga0070712_100001334 | Ga0070712_1000013343 | 512 |
| 43 | 3300006175 | Ga0070712_100003969 | Ga0070712_1000039698 | 512 |
| 44 | 3300006237 | Ga0097621_100017550 | Ga0097621_1000175503 | 512 |
| 45 | 3300006358 | Ga0068871_100019266 | Ga0068871_1000192662 | 512 |
| 46 | 3300006914 | Ga0075436_100006664 | Ga0075436_1000066646 | 512 |
| 47 | 3300009098 | Ga0105245_10005180 | Ga0105245_100051806 | 512 |
| 48 | 3300009174 | Ga0105241_10086694 | Ga0105241_100866942 | 512 |
| 49 | 3300009176 | Ga0105242_10039083 | Ga0105242_100390834 | 512 |
| 50 | 3300013297 | Ga0157378_10003780 | Ga0157378_100037803 | 512 |
| 51 | 3300015261 | Ga0182006_1046464 | Ga0182006_10464641 | 512 |
| 52 | 3300015262 | Ga0182007_10005223 | Ga0182007_100052233 | 512 |
| 53 | 3300025910 | Ga0207684_10095375 | Ga0207684_100953751 | 512 |
| 54 | 3300025915 | Ga0207693_10000193 | Ga0207693_100001939 | 512 |
| 55 | 3300025915 | Ga0207693_10014453 | Ga0207693_100144532 | 512 |
| 56 | 3300025916 | Ga0207663_10002252 | Ga0207663_100022522 | 512 |
| 57 | 3300025927 | Ga0207687_10017686 | Ga0207687_100176862 | 512 |
| 58 | 3300025938 | Ga0207704_10086798 | Ga0207704_100867982 | 512 |
| 59 | 3300025939 | Ga0207665_10000888 | Ga0207665_100008881 | 512 |
| 60 | 3300026023 | Ga0207677_10006917 | Ga0207677_100069172 | 512 |
| 61 | 3300028800 | Ga0265338_10000906 | Ga0265338_1000090610 | 512 |
| 62 | 3300046472 | Ga0495580_0001456 | Ga0495580_0001456_2239_3786 | 512 |
| 63 | 3300046472 | Ga0495580_0003513 | Ga0495580_0003513_5026_6567 | 512 |
| 64 | 3300046472 | Ga0495580_0035199 | Ga0495580_0035199_683_2230 | 512 |
| 65 | 3300046517 | Ga0495630_0029558 | Ga0495630_0029558_74_1624 | 512 |
| 66 | 3300046559 | Ga0495667_0093252 | Ga0495667_0093252_284_1828 | 512 |
| 67 | 3300046679 | Ga0495623_0056055 | Ga0495623_0056055_136_1680 | 512 |
| 68 | 3300047319 | Ga0495674_0048873 | Ga0495674_0048873_648_2198 | 512 |
| 69 | 3300005563 | Ga0068855_100007134 | Ga0068855_1000071344 | 514 |
| 70 | 3300009093 | Ga0105240_10002133 | Ga0105240_1000213313 | 514 |
| 71 | 3300013104 | Ga0157370_10027828 | Ga0157370_100278282 | 514 |
| 72 | 3300009093 | Ga0105240_10001780 | Ga0105240_100017804 | 515 |
| 73 | 3300025913 | Ga0207695_10003207 | Ga0207695_1000320713 | 515 |
| 74 | 3300047319 | Ga0495674_0020008 | Ga0495674_0020008_210_1784 | 515 |
| 75 | 3300049572 | Ga0501036_0020980 | Ga0501036_0020980_3500_5053 | 515 |
| 76 | 3300049574 | Ga0501038_0004398 | Ga0501038_0004398_6304_7857 | 515 |
| 77 | 3300049575 | Ga0501039_0003798 | Ga0501039_0003798_3073_4626 | 515 |
| 78 | 3300049576 | Ga0501040_0000205 | Ga0501040_0000205_2988_4541 | 515 |
| 79 | 3300049577 | Ga0501041_0001319 | Ga0501041_0001319_9281_10834 | 515 |
| 80 | 3300049578 | Ga0501042_0027643 | Ga0501042_0027643_2151_3704 | 515 |
| 81 | 3300049580 | Ga0501046_0018969 | Ga0501046_0018969_76_1629 | 515 |
| 82 | 3300049587 | Ga0501071_0002484 | Ga0501071_0002484_3320_4873 | 515 |
| 83 | 3300049588 | Ga0501072_0000441 | Ga0501072_0000441_2308_3861 | 515 |
| 84 | 3300049590 | Ga0501074_0046368 | Ga0501074_0046368_1153_2706 | 515 |
| 85 | 3300049591 | Ga0501075_0000062 | Ga0501075_0000062_7703_9256 | 515 |
| 86 | 3300049592 | Ga0501076_0000084 | Ga0501076_0000084_2944_4497 | 515 |
| 87 | 3300049741 | Ga0501079_0028354 | Ga0501079_0028354_1976_3529 | 515 |
| 88 | 3300049742 | Ga0501080_0008328 | Ga0501080_0008328_5041_6594 | 515 |
| 89 | 3300049743 | Ga0501081_0000153 | Ga0501081_0000153_4076_5629 | 515 |
| 90 | 3300049822 | Ga0501035_0033172 | Ga0501035_0033172_2764_4317 | 515 |
| 91 | 3300049824 | Ga0501045_0011962 | Ga0501045_0011962_1668_3221 | 515 |
| 92 | 3300054114 | Ga0501084_0001168 | Ga0501084_0001168_18863_20416 | 515 |
| 93 | 3300060353 | Ga0501082_0000469 | Ga0501082_0000469_33203_34756 | 515 |
| 94 | 3300061734 | Ga0530510_0006879 | Ga0530510_0006879_3933_5486 | 515 |
| 95 | 3300005435 | Ga0070714_100001597 | Ga0070714_10000159726 | 520 |
| 96 | 3300025929 | Ga0207664_10039421 | Ga0207664_100394212 | 520 |
| 97 | 3300026116 | Ga0207674_10131511 | Ga0207674_101315112 | 520 |
| 98 | 3300035692 | Ga0373935_0022052 | Ga0373935_0022052_414_2015 | 520 |
| 99 | 3300037853 | Ga0436364_1216285 | Ga0436364_1216285_734_2329 | 520 |
| 100 | 3300046473 | Ga0495582_0000499 | Ga0495582_0000499_17023_18618 | 520 |
| 101 | 3300005841 | Ga0068863_100018465 | Ga0068863_1000184655 | 521 |
| 102 | 3300007265 | Ga0099794_10000192 | Ga0099794_1000019224 | 521 |
| 103 | 3300009093 | Ga0105240_10033103 | Ga0105240_100331033 | 521 |
| 104 | 3300009545 | Ga0105237_10044888 | Ga0105237_100448883 | 521 |
| 105 | 3300014325 | Ga0163163_10041432 | Ga0163163_100414323 | 521 |
| 106 | 3300025913 | Ga0207695_10087572 | Ga0207695_100875722 | 521 |
| 107 | 3300026088 | Ga0207641_10133814 | Ga0207641_101338142 | 521 |
| 108 | 3300027671 | Ga0209588_1000134 | Ga0209588_100013421 | 521 |
| 109 | 3300031241 | Ga0265325_10008457 | Ga0265325_100084573 | 521 |
| 110 | 3300031250 | Ga0265331_10005038 | Ga0265331_100050385 | 521 |
| 111 | 3300031344 | Ga0265316_10014573 | Ga0265316_100145733 | 521 |
| 112 | 3300035695 | Ga0373927_0007238 | Ga0373927_0007238_2000_3577 | 521 |
| 113 | 3300035725 | Ga0373947_0008799 | Ga0373947_0008799_3958_5535 | 521 |
| 114 | 3300036401 | Ga0373937_0082713 | Ga0373937_0082713_1036_2613 | 521 |
| 115 | 3300044656 | Ga0466969_0000162 | Ga0466969_0000162_11939_13546 | 521 |
| 116 | 3300044658 | Ga0466972_0011442 | Ga0466972_0011442_2787_4394 | 521 |
| 117 | 3300044684 | Ga0466966_0001428 | Ga0466966_0001428_13387_14994 | 521 |
| 118 | 3300044706 | Ga0466964_0002112 | Ga0466964_0002112_4835_6442 | 521 |
| 119 | 3300044735 | Ga0466968_0000072 | Ga0466968_0000072_13560_15167 | 521 |
| 120 | 3300044765 | Ga0466970_0000073 | Ga0466970_0000073_13560_15167 | 521 |
| 121 | 3300045049 | Ga0466959_0021419 | Ga0466959_0021419_1483_3090 | 521 |
| 122 | 3300046459 | Ga0495629_0060164 | Ga0495629_0060164_913_2541 | 521 |
| 123 | 3300046462 | Ga0495651_0000549 | Ga0495651_0000549_20491_22080 | 521 |
| 124 | 3300046462 | Ga0495651_0006349 | Ga0495651_0006349_7406_8983 | 521 |
| 125 | 3300046462 | Ga0495651_0066366 | Ga0495651_0066366_314_1891 | 521 |
| 126 | 3300046463 | Ga0495653_0008368 | Ga0495653_0008368_4252_5829 | 521 |
| 127 | 3300046472 | Ga0495580_0015473 | Ga0495580_0015473_1656_3233 | 521 |
| 128 | 3300046511 | Ga0495608_0025594 | Ga0495608_0025594_2000_3577 | 521 |
| 129 | 3300046511 | Ga0495608_0118772 | Ga0495608_0118772_66_1655 | 521 |
| 130 | 3300046514 | Ga0495618_0077853 | Ga0495618_0077853_502_2091 | 521 |
| 131 | 3300046516 | Ga0495628_0000677 | Ga0495628_0000677_5779_7368 | 521 |
| 132 | 3300046516 | Ga0495628_0005246 | Ga0495628_0005246_869_2515 | 521 |
| 133 | 3300046516 | Ga0495628_0069980 | Ga0495628_0069980_873_2450 | 521 |
| 134 | 3300046529 | Ga0495652_0059696 | Ga0495652_0059696_1548_3137 | 521 |
| 135 | 3300046531 | Ga0495665_0001819 | Ga0495665_0001819_6507_8084 | 521 |
| 136 | 3300046535 | Ga0495586_0004445 | Ga0495586_0004445_2139_3716 | 521 |
| 137 | 3300046536 | Ga0495587_0005416 | Ga0495587_0005416_6612_8201 | 521 |
| 138 | 3300046536 | Ga0495587_0020095 | Ga0495587_0020095_2272_3849 | 521 |
| 139 | 3300046543 | Ga0495645_0088196 | Ga0495645_0088196_561_2138 | 521 |
| 140 | 3300046559 | Ga0495667_0007580 | Ga0495667_0007580_446_2035 | 521 |
| 141 | 3300046559 | Ga0495667_0020072 | Ga0495667_0020072_353_1942 | 521 |
| 142 | 3300046675 | Ga0495657_0071029 | Ga0495657_0071029_605_2194 | 521 |
| 143 | 3300046678 | Ga0495599_0016983 | Ga0495599_0016983_2860_4449 | 521 |
| 144 | 3300046680 | Ga0495646_0004098 | Ga0495646_0004098_6540_8117 | 521 |
| 145 | 3300046689 | Ga0495613_0052992 | Ga0495613_0052992_258_1847 | 521 |
| 146 | 3300046809 | Ga0495600_0001704 | Ga0495600_0001704_7679_9268 | 521 |
| 147 | 3300047317 | Ga0495604_0003303 | Ga0495604_0003303_6544_8133 | 521 |
| 148 | 3300047319 | Ga0495674_0010559 | Ga0495674_0010559_4411_5988 | 521 |
| 149 | 3300047319 | Ga0495674_0019154 | Ga0495674_0019154_3851_5428 | 521 |
| 150 | 3300047319 | Ga0495674_0083613 | Ga0495674_0083613_593_2221 | 521 |
| 151 | 3300047322 | Ga0495680_0000095 | Ga0495680_0000095_29999_31576 | 521 |
| 152 | 3300047322 | Ga0495680_0000656 | Ga0495680_0000656_21348_22937 | 521 |
| 153 | 3300047444 | Ga0495675_0000393 | Ga0495675_0000393_18517_20106 | 521 |
| 154 | 3300047444 | Ga0495675_0007334 | Ga0495675_0007334_1271_2848 | 521 |
| 155 | 3300047471 | Ga0495684_0001593 | Ga0495684_0001593_8973_10562 | 521 |
| 156 | 3300047471 | Ga0495684_0013563 | Ga0495684_0013563_2357_3934 | 521 |
| 157 | 3300049570 | Ga0501033_0041370 | Ga0501033_0041370_1633_3258 | 521 |
| 158 | 3300049571 | Ga0501034_0027617 | Ga0501034_0027617_3718_5343 | 521 |
| 159 | 3300049580 | Ga0501046_0053227 | Ga0501046_0053227_1184_2809 | 521 |
| 160 | 3300049581 | Ga0501047_0044527 | Ga0501047_0044527_889_2514 | 521 |
| 161 | 3300049742 | Ga0501080_0098614 | Ga0501080_0098614_426_2033 | 521 |
| 162 | 3300053078 | Ga0495612_0004124 | Ga0495612_0004124_473_2050 | 521 |
| 163 | iso_pu_bacteria | 2857460504 | 2857464227 | 521 |
| 164 | 3300009177 | Ga0105248_10050397 | Ga0105248_100503972 | 522 |
| 165 | 3300046514 | Ga0495618_0126129 | Ga0495618_0126129_20_1600 | 522 |
| 166 | 3300047319 | Ga0495674_0060709 | Ga0495674_0060709_1029_2609 | 522 |
| 167 | 3300005530 | Ga0070679_100010751 | Ga0070679_1000107513 | 523 |
| 168 | 3300025944 | Ga0207661_10111060 | Ga0207661_101110602 | 523 |
| 169 | 3300049568 | Ga0501031_0002082 | Ga0501031_0002082_10018_11637 | 526 |
| 170 | 3300049569 | Ga0501032_0033102 | Ga0501032_0033102_1777_3396 | 526 |
| 171 | 3300049570 | Ga0501033_0002893 | Ga0501033_0002893_5446_7065 | 526 |
| 172 | 3300049573 | Ga0501037_0000951 | Ga0501037_0000951_11225_12844 | 526 |
| 173 | 3300049579 | Ga0501043_0000950 | Ga0501043_0000950_10560_12179 | 526 |
| 174 | 3300049584 | Ga0501068_0000889 | Ga0501068_0000889_11186_12805 | 526 |
| 175 | 3300049592 | Ga0501076_0013081 | Ga0501076_0013081_2361_3980 | 526 |
| 176 | 3300049593 | Ga0501077_0002764 | Ga0501077_0002764_1634_3253 | 526 |
| 177 | 3300049741 | Ga0501079_0001793 | Ga0501079_0001793_1603_3222 | 526 |
| 178 | 3300049822 | Ga0501035_0054693 | Ga0501035_0054693_968_2587 | 526 |
| 179 | 3300060353 | Ga0501082_0004661 | Ga0501082_0004661_7098_8717 | 526 |
| 180 | 3300006163 | Ga0070715_10042108 | Ga0070715_100421081 | 527 |
| 181 | 3300006173 | Ga0070716_100001911 | Ga0070716_1000019113 | 527 |
| 182 | 3300025905 | Ga0207685_10012115 | Ga0207685_100121152 | 527 |
| 183 | 3300025939 | Ga0207665_10006009 | Ga0207665_100060094 | 527 |
| 184 | 3300037853 | Ga0436364_1287720 | Ga0436364_1287720_8499_10103 | 528 |
| 185 | 3300005329 | Ga0070683_100065394 | Ga0070683_1000653942 | 529 |
| 186 | 3300005548 | Ga0070665_100022769 | Ga0070665_1000227695 | 529 |
| 187 | 3300005578 | Ga0068854_100010804 | Ga0068854_1000108043 | 529 |
| 188 | 3300005834 | Ga0068851_10002195 | Ga0068851_100021958 | 529 |
| 189 | 3300006028 | Ga0070717_10001159 | Ga0070717_100011596 | 529 |
| 190 | 3300009551 | Ga0105238_10024982 | Ga0105238_100249823 | 529 |
| 191 | 3300010375 | Ga0105239_10104354 | Ga0105239_101043542 | 529 |
| 192 | 3300013296 | Ga0157374_10038193 | Ga0157374_100381935 | 529 |
| 193 | 3300014968 | Ga0157379_10213465 | Ga0157379_102134651 | 529 |
| 194 | 3300025920 | Ga0207649_10129599 | Ga0207649_101295991 | 529 |
| 195 | 3300025924 | Ga0207694_10114673 | Ga0207694_101146732 | 529 |
| 196 | 3300025929 | Ga0207664_10087489 | Ga0207664_100874892 | 529 |
| 197 | 3300025944 | Ga0207661_10011428 | Ga0207661_100114282 | 529 |
| 198 | 3300031712 | Ga0265342_10004172 | Ga0265342_100041726 | 529 |
| 199 | 3300036401 | Ga0373937_0035852 | Ga0373937_0035852_184_1773 | 529 |
| 200 | 3300048907 | Ga0496104_0085193 | Ga0496104_0085193_251_1840 | 529 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3cv2-assembly1.cif.gz_A | atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design | 0.9805 | 16 | 529 |
| 3cux-assembly1.cif.gz_A | atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design | 0.9753 | 19 | 528 |
| 3cv2-assembly1.cif.gz_A | atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design | 0.9602 | 16 | 529 |
| 3cux-assembly1.cif.gz_A | atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design | 0.9542 | 19 | 528 |
| 1n8w-assembly1.cif.gz_A | biochemical and structural studies of malate synthase from mycobacterium tuberculosis | 0.8236 | 17 | 527 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3cuxA01 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Malate synthase, domain 3 | 0.9876 | 19 | 408 | 3.20.20.360 |
| af_Q10663_846_963_1.20.1220.12 | Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III | 0.9658 | 411 | 528 | 1.20.1220.12 |
| 3cuxA01 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Malate synthase, domain 3 | 0.9592 | 19 | 408 | 3.20.20.360 |
| af_A0A0R4IAX5_7_408_3.20.20.360 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Malate synthase, domain 3 | 0.9462 | 13 | 408 | 3.20.20.360 |
| af_Q5APD2_423_540_1.20.1220.12 | Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III | 0.9452 | 409 | 529 | 1.20.1220.12 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6N9XW18-F1-model_v4 | deleted | 1.003 | 210 | 287 |
|
| AF-A0A0K2QXZ3-F1-model_v4 | deleted | 1.001 | 187 | 285 |
|
| AF-A0A0B1RQM0-F1-model_v4 | malate synthase (EC 2.3.3.9) | 1 | 99 | 231 |
GO:0004474
GO:0005737 GO:0006097 |
| AF-A0A3C2C8T4-F1-model_v4 | deleted | 0.9982 | 174 | 378 |
|
| AF-R4HJS4-F1-model_v4 | Malate synthase (EC 2.3.3.9) | 0.9981 | 219 | 327 |
GO:0004474
GO:0006097 GO:0006099 GO:0009514 |
Predicted Structure (AlphaFold2)
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