F306978
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 200 | 164 | 186 | 261 |
Family's Representative Sequence
| Representative Sequence | 3300006195|Ga0075366_10005066|Ga0075366_100050665 |
| Length | 293 |
| Sequence | MTRRFAGHTPAPAKFFGQGPRRVVRNRRLARAVGVPMRIATFNINGVNGRLAALLRWLDEDKPDVACLQELKAPQDRFPEAAIREAGYGAIWHGQSAWNGVAILARGDKPVERRRGLPGDPDDPHSRYIEAEIGDLIVGCLYAPNGNPAPGPKFDYKLKWYARFLLHAEDLLAEQRPVILAGDYNIIPTDLDVYVPDRWRDDALFRPEVRTAYRYMIDQGWTDALRTLHPGERIYTFWDYLRRRFDRDAGLRIDHLMLDPILARRLVAAGVDRRVRAREKPSDHAPVWVEIRD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2585428106 | Caulobacter sp. OV484 | Isolate | Rhizosphere |
| 2 | 2643221640 | Caulobacter sp. Root342 | Isolate | Unclassified |
| 3 | 2643221642 | Caulobacter sp. Root343 | Isolate | Unclassified |
| 4 | 2818991448 | Rhizobium miluonense 1234 | Isolate | Unclassified |
| 5 | 2821443989 | Inquilinus ginsengisoli 584 | Isolate | Unclassified |
| 6 | 2838736955 | Rhizobium cellulosilyticum SEMIA 448 | Isolate | Nodule |
| 7 | 2841840854 | Rhizobium cellulosilyticum SEMIA 444 | Isolate | Nodule |
| 8 | 2842140634 | Rhizobium cellulosilyticum SEMIA 452 | Isolate | Nodule |
| 9 | 2857504554 | Caulobacter sp. R-72291 | Isolate | Unclassified |
| 10 | 2919166419 | Agrobacterium cavarae 2074 | Isolate | Unclassified |
| 11 | 2928531327 | Caulobacter sp. 1776 | Isolate | Rhizosphere |
| 12 | 2989776772 | Rhizobium glycinendophyticum CL12 | Isolate | Unclassified |
| 13 | 3005452660 | Rhizobium grahamii BG7 | Isolate | Unclassified |
| 14 | 3300002076 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 | Metagenome | Rhizosphere |
| 15 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 16 | 3300002704 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB | Metagenome | Unclassified |
| 17 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 18 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 19 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 20 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 21 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 22 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 23 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 24 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 25 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 26 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 27 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 28 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 29 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 30 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 33 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 34 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 37 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 38 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 40 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 42 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 43 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 44 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 45 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 46 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 47 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 48 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 49 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 51 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300025206 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) | Metagenome | Unclassified |
| 68 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 69 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 70 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 71 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 75 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 99 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 100 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 101 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 102 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 103 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 104 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 105 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 106 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 107 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 108 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 109 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 110 | 3300041460 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG | Metagenome | Rhizoplane |
| 111 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 112 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 113 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 114 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 115 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 116 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 117 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 118 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 142 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 146 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 147 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 148 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 149 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 150 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 151 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 152 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 153 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 154 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 155 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 156 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 157 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 158 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 159 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 160 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 161 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 162 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 163 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 164 | 8005645114 | Rhizobium tropici IGFRI Rhizo-19 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93 |
| Metatranscriptomes | 0 |
| Isolates | 7 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11 |
| Nodule | 1.5 |
| Rhizoplane | 1.5 |
| Rhizosphere | 71.5 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 14.5 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24749J21850_1000839 | 3300002076 | Bacteria | 4433 |
| 2 | JGI24751J29686_10001361 | 3300002459 | Bacteria | 5140 |
| 3 | JGI25155J39150_1000197 | 3300002704 | Bacteria | 25222 |
| 4 | JGI25156J39149_1000445 | 3300002705 | Bacteria | 25222 |
| 5 | JGI25154J39366_1000367 | 3300002738 | Bacteria | 25222 |
| 6 | JGI25157J39369_1000476 | 3300002741 | Bacteria | 25222 |
| 7 | rootH1_10088057 | 3300003316 | Bacteria | 2215 |
| 8 | rootH2_10012824 | 3300003320 | Bacteria | 13341 |
| 9 | rootH2_10020088 | 3300003320 | Bacteria | 18787 |
| 10 | rootH2_10123639 | 3300003320 | Bacteria | 7129 |
| 11 | rootL2_10020659 | 3300003322 | Bacteria | 27164 |
| 12 | rootH1_10026648 | 3300003323 | Bacteria | 15168 |
| 13 | rootH1_10062594 | 3300003323 | Bacteria | 3322 |
| 14 | Ga0055536_1001415 | 3300003781 | Bacteria | 14501 |
| 15 | Ga0055536_1030282 | 3300003781 | Bacteria | 1437 |
| 16 | Ga0055530_10001863 | 3300003791 | Bacteria | 14501 |
| 17 | Ga0055530_10015534 | 3300003791 | Bacteria | 2478 |
| 18 | Ga0055531_10038398 | 3300003794 | Bacteria | 1437 |
| 19 | Ga0065714_10002396 | 3300005288 | Bacteria | 27566 |
| 20 | Ga0065715_10008721 | 3300005293 | Bacteria | 2440 |
| 21 | Ga0070683_100290595 | 3300005329 | Unclassified | 1554 |
| 22 | Ga0070670_100011137 | 3300005331 | Bacteria | 7685 |
| 23 | Ga0070670_100015480 | 3300005331 | Bacteria | 6550 |
| 24 | Ga0070666_10079931 | 3300005335 | Bacteria | 2233 |
| 25 | Ga0070682_100000012 | 3300005337 | Bacteria | 265658 |
| 26 | Ga0070689_100243202 | 3300005340 | Bacteria | 1483 |
| 27 | Ga0070691_10046999 | 3300005341 | Bacteria | 2052 |
| 28 | Ga0070673_100210444 | 3300005364 | Bacteria | 1679 |
| 29 | Ga0070688_100115435 | 3300005365 | Bacteria | 1791 |
| 30 | Ga0070681_10016374 | 3300005458 | Bacteria | 7401 |
| 31 | Ga0070699_100200628 | 3300005518 | Bacteria | 1774 |
| 32 | Ga0068853_100048224 | 3300005539 | Bacteria | 3658 |
| 33 | Ga0070665_100028990 | 3300005548 | Bacteria | 5571 |
| 34 | Ga0068857_100401632 | 3300005577 | Bacteria | 1275 |
| 35 | Ga0068856_100147076 | 3300005614 | Bacteria | 2364 |
| 36 | Ga0068863_100016204 | 3300005841 | Bacteria | 7150 |
| 37 | Ga0068863_100019921 | 3300005841 | Bacteria | 6417 |
| 38 | Ga0068858_100144325 | 3300005842 | Bacteria | 2235 |
| 39 | Ga0068860_100003510 | 3300005843 | Bacteria | 16143 |
| 40 | Ga0068860_100142598 | 3300005843 | Bacteria | 2304 |
| 41 | Ga0068862_100384280 | 3300005844 | Bacteria | 1310 |
| 42 | Ga0075365_10024871 | 3300006038 | Bacteria | 3785 |
| 43 | Ga0075366_10005066 | 3300006195 | Bacteria | 7124 |
| 44 | Ga0097621_100190970 | 3300006237 | Bacteria | 1774 |
| 45 | Ga0068871_100222638 | 3300006358 | Bacteria | 1635 |
| 46 | Ga0097620_100058412 | 3300006931 | Bacteria | 3886 |
| 47 | Ga0111539_10380558 | 3300009094 | Bacteria | 1643 |
| 48 | Ga0111539_10666117 | 3300009094 | Bacteria | 1212 |
| 49 | Ga0105245_10022944 | 3300009098 | Bacteria | 5476 |
| 50 | Ga0105247_10009730 | 3300009101 | Bacteria | 5830 |
| 51 | Ga0105242_10048885 | 3300009176 | Bacteria | 3439 |
| 52 | Ga0105248_10133142 | 3300009177 | Bacteria | 2805 |
| 53 | Ga0105238_10072143 | 3300009551 | Bacteria | 3450 |
| 54 | Ga0105238_10332037 | 3300009551 | Bacteria | 1507 |
| 55 | Ga0105249_10000038 | 3300009553 | Bacteria | 196425 |
| 56 | Ga0105249_10003297 | 3300009553 | Bacteria | 13988 |
| 57 | Ga0105249_10083915 | 3300009553 | Bacteria | 2966 |
| 58 | Ga0105246_10011880 | 3300011119 | Bacteria | 5417 |
| 59 | Ga0157371_10005936 | 3300013102 | Bacteria | 10194 |
| 60 | Ga0157378_10091075 | 3300013297 | Bacteria | 2772 |
| 61 | Ga0163162_10013650 | 3300013306 | Bacteria | 7936 |
| 62 | Ga0157375_10028363 | 3300013308 | Bacteria | 5246 |
| 63 | Ga0157375_10081733 | 3300013308 | Bacteria | 3271 |
| 64 | Ga0157380_10013823 | 3300014326 | Bacteria | 5895 |
| 65 | Ga0157377_10360429 | 3300014745 | Bacteria | 978 |
| 66 | Ga0157379_10177031 | 3300014968 | Bacteria | 1926 |
| 67 | Ga0209435_100135 | 3300025206 | Bacteria | 25274 |
| 68 | Ga0209646_1000406 | 3300025246 | Bacteria | 25274 |
| 69 | Ga0209026_1000561 | 3300025250 | Bacteria | 25274 |
| 70 | Ga0209759_1000805 | 3300025256 | Bacteria | 25274 |
| 71 | Ga0209676_1000184 | 3300025292 | Bacteria | 143543 |
| 72 | Ga0209676_1006788 | 3300025292 | Bacteria | 5556 |
| 73 | Ga0209050_1000548 | 3300025298 | Bacteria | 62143 |
| 74 | Ga0209050_1000620 | 3300025298 | Bacteria | 55670 |
| 75 | Ga0209051_1003506 | 3300025303 | Bacteria | 10256 |
| 76 | Ga0209257_1001202 | 3300025304 | Bacteria | 32525 |
| 77 | Ga0209257_1049122 | 3300025304 | Bacteria | 1203 |
| 78 | Ga0207710_10034444 | 3300025900 | Bacteria | 2225 |
| 79 | Ga0207645_10226563 | 3300025907 | Bacteria | 1233 |
| 80 | Ga0207707_10032459 | 3300025912 | Bacteria | 4570 |
| 81 | Ga0207695_10002305 | 3300025913 | Bacteria | 28454 |
| 82 | Ga0207671_10323013 | 3300025914 | Bacteria | 1221 |
| 83 | Ga0207660_10210695 | 3300025917 | Bacteria | 1522 |
| 84 | Ga0207649_10053079 | 3300025920 | Bacteria | 2517 |
| 85 | Ga0207652_10157184 | 3300025921 | Bacteria | 2037 |
| 86 | Ga0207650_10038037 | 3300025925 | Bacteria | 3510 |
| 87 | Ga0207650_10085855 | 3300025925 | Bacteria | 2395 |
| 88 | Ga0207687_10038495 | 3300025927 | Bacteria | 3269 |
| 89 | Ga0207644_10066058 | 3300025931 | Bacteria | 2632 |
| 90 | Ga0207706_10486731 | 3300025933 | Bacteria | 1066 |
| 91 | Ga0207670_10067037 | 3300025936 | Bacteria | 2468 |
| 92 | Ga0207679_10376743 | 3300025945 | Bacteria | 1243 |
| 93 | Ga0207651_10353981 | 3300025960 | Bacteria | 1237 |
| 94 | Ga0207712_10000002 | 3300025961 | Bacteria | 706628 |
| 95 | Ga0207712_10181667 | 3300025961 | Unclassified | 1653 |
| 96 | Ga0207677_10182440 | 3300026023 | Bacteria | 1652 |
| 97 | Ga0207639_10035347 | 3300026041 | Bacteria | 3697 |
| 98 | Ga0207639_10080199 | 3300026041 | Bacteria | 2581 |
| 99 | Ga0207641_10013719 | 3300026088 | Bacteria | 6648 |
| 100 | Ga0207641_10193359 | 3300026088 | Unclassified | 1871 |
| 101 | Ga0207674_10415890 | 3300026116 | Bacteria | 1299 |
| 102 | Ga0268266_10013101 | 3300028379 | Bacteria | 7151 |
| 103 | Ga0268265_10000463 | 3300028380 | Bacteria | 42971 |
| 104 | Ga0268265_10451317 | 3300028380 | Bacteria | 1201 |
| 105 | Ga0268264_10000369 | 3300028381 | Bacteria | 66509 |
| 106 | Ga0307517_10046003 | 3300028786 | Bacteria | 4568 |
| 107 | Ga0307405_10219929 | 3300031731 | Bacteria | 1393 |
| 108 | Ga0307413_10000677 | 3300031824 | Bacteria | 11596 |
| 109 | Ga0307413_10467706 | 3300031824 | Bacteria | 1005 |
| 110 | Ga0307410_10004499 | 3300031852 | Bacteria | 7218 |
| 111 | Ga0307410_10503589 | 3300031852 | Bacteria | 997 |
| 112 | Ga0307406_10230626 | 3300031901 | Bacteria | 1382 |
| 113 | Ga0307407_10045950 | 3300031903 | Bacteria | 2470 |
| 114 | Ga0307409_100031937 | 3300031995 | Bacteria | 3809 |
| 115 | Ga0307409_100084010 | 3300031995 | Bacteria | 2584 |
| 116 | Ga0307409_100283262 | 3300031995 | Bacteria | 1533 |
| 117 | Ga0307414_10001484 | 3300032004 | Bacteria | 12203 |
| 118 | Ga0307414_10068288 | 3300032004 | Bacteria | 2550 |
| 119 | Ga0307414_10297647 | 3300032004 | Bacteria | 1363 |
| 120 | Ga0307414_10390178 | 3300032004 | Bacteria | 1206 |
| 121 | Ga0307411_10000629 | 3300032005 | Bacteria | 12767 |
| 122 | Ga0307411_10065013 | 3300032005 | Bacteria | 2445 |
| 123 | Ga0307415_100654280 | 3300032126 | Bacteria | 942 |
| 124 | Ga0307415_100794058 | 3300032126 | Bacteria | 863 |
| 125 | Ga0395905_0002592 | 3300037471 | Bacteria | 19886 |
| 126 | Ga0439465_0000937 | 3300041413 | Bacteria | 9234 |
| 127 | Ga0451802_0358990 | 3300041460 | Bacteria | 1001 |
| 128 | Ga0439445_0002188 | 3300042004 | Bacteria | 4334 |
| 129 | Ga0466969_0089383 | 3300044656 | Bacteria | 1461 |
| 130 | Ga0466972_0000046 | 3300044658 | Bacteria | 127926 |
| 131 | Ga0466966_0034397 | 3300044684 | Bacteria | 3276 |
| 132 | Ga0466970_0003235 | 3300044765 | Bacteria | 7918 |
| 133 | Ga0466959_0020223 | 3300045049 | Bacteria | 4901 |
| 134 | Ga0451576_0362820 | 3300045051 | Bacteria | 1517 |
| 135 | Ga0495590_0000224 | 3300046457 | Bacteria | 30973 |
| 136 | Ga0495638_0000488 | 3300046460 | Bacteria | 47418 |
| 137 | Ga0495653_0003197 | 3300046463 | Bacteria | 13115 |
| 138 | Ga0495653_0008225 | 3300046463 | Bacteria | 8547 |
| 139 | Ga0495580_0086543 | 3300046472 | Bacteria | 2182 |
| 140 | Ga0495582_0001791 | 3300046473 | Bacteria | 12128 |
| 141 | Ga0495606_0095357 | 3300046507 | Bacteria | 1822 |
| 142 | Ga0495610_0100712 | 3300046512 | Bacteria | 1295 |
| 143 | Ga0495630_0222065 | 3300046517 | Bacteria | 1442 |
| 144 | Ga0495666_0002503 | 3300046526 | Bacteria | 9119 |
| 145 | Ga0495642_0087976 | 3300046528 | Bacteria | 1313 |
| 146 | Ga0495652_0004366 | 3300046529 | Bacteria | 13524 |
| 147 | Ga0495665_0006015 | 3300046531 | Bacteria | 6542 |
| 148 | Ga0495586_0035923 | 3300046535 | Bacteria | 2661 |
| 149 | Ga0495587_0025235 | 3300046536 | Bacteria | 3632 |
| 150 | Ga0495622_0039199 | 3300046557 | Bacteria | 2206 |
| 151 | Ga0495668_0000067 | 3300046616 | Bacteria | 176418 |
| 152 | Ga0495668_0000130 | 3300046616 | Bacteria | 112924 |
| 153 | Ga0495634_0046499 | 3300046642 | Bacteria | 2928 |
| 154 | Ga0495625_0000979 | 3300046660 | Bacteria | 37941 |
| 155 | Ga0495625_0082575 | 3300046660 | Bacteria | 2234 |
| 156 | Ga0495661_0036976 | 3300046665 | Bacteria | 3051 |
| 157 | Ga0495661_0070031 | 3300046665 | Bacteria | 2054 |
| 158 | Ga0495588_0006088 | 3300046674 | Bacteria | 5415 |
| 159 | Ga0495623_0031039 | 3300046679 | Bacteria | 3437 |
| 160 | Ga0495670_0031189 | 3300046691 | Bacteria | 2649 |
| 161 | Ga0495604_0003732 | 3300047317 | Bacteria | 12129 |
| 162 | Ga0495680_0117791 | 3300047322 | Bacteria | 1963 |
| 163 | Ga0495673_0000115 | 3300047469 | Bacteria | 154414 |
| 164 | Ga0495673_0002200 | 3300047469 | Bacteria | 14105 |
| 165 | Ga0495686_0068478 | 3300047472 | Bacteria | 2190 |
| 166 | Ga0495626_0030120 | 3300048091 | Bacteria | 2619 |
| 167 | Ga0496108_0332377 | 3300048911 | Bacteria | 1325 |
| 168 | Ga0496113_0047639 | 3300048916 | Bacteria | 3186 |
| 169 | Ga0496121_0426877 | 3300048924 | Bacteria | 861 |
| 170 | Ga0496122_0020934 | 3300048925 | Bacteria | 5878 |
| 171 | Ga0496122_0221343 | 3300048925 | Bacteria | 1085 |
| 172 | Ga0496124_0038987 | 3300048927 | Bacteria | 4121 |
| 173 | Ga0496126_0005038 | 3300048929 | Bacteria | 15347 |
| 174 | Ga0501042_0194028 | 3300049578 | Bacteria | 1465 |
| 175 | Ga0501235_047837 | 3300049669 | Bacteria | 987 |
| 176 | nmdc:mga0yw44_66270_c1 | 3300050492 | Bacteria | 2228 |
| 177 | nmdc:mga0sz30_32105_c1 | 3300050516 | Bacteria | 2176 |
| 178 | Ga0495595_0043871 | 3300053084 | Bacteria | 2053 |
| 179 | Ga0495619_0480478 | 3300053085 | Bacteria | 855 |
| 180 | Ga0500608_000135 | 3300053122 | Bacteria | 30072 |
| 181 | Ga0500618_000154 | 3300053125 | Bacteria | 56791 |
| 182 | Ga0500652_129065 | 3300053131 | Bacteria | 1055 |
| 183 | Ga0500559_0003927 | 3300053136 | Bacteria | 7179 |
| 184 | Ga0500573_0010034 | 3300053140 | Bacteria | 5278 |
| 185 | Ga0500622_0005037 | 3300053156 | Bacteria | 8048 |
| 186 | Ga0466962_0080983 | 3300061719 | Bacteria | 1552 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300014745 | Ga0157377_10360429 | Ga0157377_103604292 | 235 |
| 2 | 3300045051 | Ga0451576_0362820 | Ga0451576_0362820_774_1502 | 235 |
| 3 | 3300025907 | Ga0207645_10226563 | Ga0207645_102265631 | 243 |
| 4 | 3300031824 | Ga0307413_10467706 | Ga0307413_104677062 | 243 |
| 5 | 3300053125 | Ga0500618_000154 | Ga0500618_000154_28846_29637 | 247 |
| 6 | 3300046512 | Ga0495610_0100712 | Ga0495610_0100712_17_769 | 248 |
| 7 | iso_pu_bacteria | 2838736955 | 2838740192 | 250 |
| 8 | iso_pu_bacteria | 2841840854 | 2841843683 | 250 |
| 9 | iso_pu_bacteria | 2842140634 | 2842143403 | 250 |
| 10 | iso_pu_bacteria | 2989776772 | 2989780823 | 251 |
| 11 | iso_pu_bacteria | 2585428106 | 2587918800 | 252 |
| 12 | iso_pu_bacteria | 2643221640 | 2644225447 | 252 |
| 13 | iso_pu_bacteria | 2643221642 | 2644232756 | 252 |
| 14 | iso_pu_bacteria | 2818991448 | 2819613818 | 252 |
| 15 | iso_pu_bacteria | 2821443989 | 2821447319 | 252 |
| 16 | iso_pu_bacteria | 2857504554 | 2857508698 | 252 |
| 17 | iso_pu_bacteria | 2919166419 | 2919170908 | 252 |
| 18 | iso_pu_bacteria | 2928531327 | 2928535664 | 252 |
| 19 | iso_pu_bacteria | 3005452660 | 3005457656 | 252 |
| 20 | iso_pu_bacteria | 8005645114 | 8005651298 | 252 |
| 21 | 3300041460 | Ga0451802_0358990 | Ga0451802_0358990_175_942 | 254 |
| 22 | 3300053140 | Ga0500573_0010034 | Ga0500573_0010034_4057_4836 | 254 |
| 23 | 3300003320 | rootH2_10012824 | rootH2_1001282412 | 255 |
| 24 | 3300005288 | Ga0065714_10002396 | Ga0065714_100023967 | 255 |
| 25 | 3300061719 | Ga0466962_0080983 | Ga0466962_0080983_74_841 | 255 |
| 26 | 3300002459 | JGI24751J29686_10001361 | JGI24751J29686_100013614 | 256 |
| 27 | 3300002704 | JGI25155J39150_1000197 | JGI25155J39150_100019710 | 256 |
| 28 | 3300002705 | JGI25156J39149_1000445 | JGI25156J39149_100044524 | 256 |
| 29 | 3300002738 | JGI25154J39366_1000367 | JGI25154J39366_100036724 | 256 |
| 30 | 3300002741 | JGI25157J39369_1000476 | JGI25157J39369_100047624 | 256 |
| 31 | 3300003316 | rootH1_10088057 | rootH1_100880571 | 256 |
| 32 | 3300003320 | rootH2_10020088 | rootH2_100200889 | 256 |
| 33 | 3300003320 | rootH2_10123639 | rootH2_101236396 | 256 |
| 34 | 3300003322 | rootL2_10020659 | rootL2_1002065929 | 256 |
| 35 | 3300003323 | rootH1_10026648 | rootH1_100266484 | 256 |
| 36 | 3300003323 | rootH1_10062594 | rootH1_100625945 | 256 |
| 37 | 3300003781 | Ga0055536_1001415 | Ga0055536_10014156 | 256 |
| 38 | 3300003781 | Ga0055536_1030282 | Ga0055536_10302822 | 256 |
| 39 | 3300003791 | Ga0055530_10001863 | Ga0055530_100018636 | 256 |
| 40 | 3300003791 | Ga0055530_10015534 | Ga0055530_100155341 | 256 |
| 41 | 3300003794 | Ga0055531_10038398 | Ga0055531_100383982 | 256 |
| 42 | 3300005329 | Ga0070683_100290595 | Ga0070683_1002905951 | 256 |
| 43 | 3300005331 | Ga0070670_100015480 | Ga0070670_1000154809 | 256 |
| 44 | 3300005335 | Ga0070666_10079931 | Ga0070666_100799313 | 256 |
| 45 | 3300005337 | Ga0070682_100000012 | Ga0070682_100000012126 | 256 |
| 46 | 3300005340 | Ga0070689_100243202 | Ga0070689_1002432022 | 256 |
| 47 | 3300005341 | Ga0070691_10046999 | Ga0070691_100469991 | 256 |
| 48 | 3300005364 | Ga0070673_100210444 | Ga0070673_1002104442 | 256 |
| 49 | 3300005365 | Ga0070688_100115435 | Ga0070688_1001154353 | 256 |
| 50 | 3300005458 | Ga0070681_10016374 | Ga0070681_100163748 | 256 |
| 51 | 3300005518 | Ga0070699_100200628 | Ga0070699_1002006283 | 256 |
| 52 | 3300005539 | Ga0068853_100048224 | Ga0068853_1000482243 | 256 |
| 53 | 3300005548 | Ga0070665_100028990 | Ga0070665_1000289908 | 256 |
| 54 | 3300005577 | Ga0068857_100401632 | Ga0068857_1004016322 | 256 |
| 55 | 3300005614 | Ga0068856_100147076 | Ga0068856_1001470763 | 256 |
| 56 | 3300005841 | Ga0068863_100016204 | Ga0068863_10001620412 | 256 |
| 57 | 3300005841 | Ga0068863_100019921 | Ga0068863_1000199216 | 256 |
| 58 | 3300005842 | Ga0068858_100144325 | Ga0068858_1001443252 | 256 |
| 59 | 3300005843 | Ga0068860_100003510 | Ga0068860_10000351011 | 256 |
| 60 | 3300005843 | Ga0068860_100142598 | Ga0068860_1001425983 | 256 |
| 61 | 3300006038 | Ga0075365_10024871 | Ga0075365_100248714 | 256 |
| 62 | 3300006195 | Ga0075366_10005066 | Ga0075366_100050665 | 256 |
| 63 | 3300006237 | Ga0097621_100190970 | Ga0097621_1001909703 | 256 |
| 64 | 3300006358 | Ga0068871_100222638 | Ga0068871_1002226383 | 256 |
| 65 | 3300006931 | Ga0097620_100058412 | Ga0097620_1000584124 | 256 |
| 66 | 3300009094 | Ga0111539_10666117 | Ga0111539_106661171 | 256 |
| 67 | 3300009098 | Ga0105245_10022944 | Ga0105245_100229447 | 256 |
| 68 | 3300009101 | Ga0105247_10009730 | Ga0105247_100097302 | 256 |
| 69 | 3300009176 | Ga0105242_10048885 | Ga0105242_100488855 | 256 |
| 70 | 3300009177 | Ga0105248_10133142 | Ga0105248_101331423 | 256 |
| 71 | 3300009551 | Ga0105238_10072143 | Ga0105238_100721434 | 256 |
| 72 | 3300009551 | Ga0105238_10332037 | Ga0105238_103320372 | 256 |
| 73 | 3300009553 | Ga0105249_10000038 | Ga0105249_1000003842 | 256 |
| 74 | 3300009553 | Ga0105249_10003297 | Ga0105249_1000329711 | 256 |
| 75 | 3300011119 | Ga0105246_10011880 | Ga0105246_100118806 | 256 |
| 76 | 3300013102 | Ga0157371_10005936 | Ga0157371_100059368 | 256 |
| 77 | 3300013297 | Ga0157378_10091075 | Ga0157378_100910753 | 256 |
| 78 | 3300013306 | Ga0163162_10013650 | Ga0163162_100136503 | 256 |
| 79 | 3300013308 | Ga0157375_10028363 | Ga0157375_100283636 | 256 |
| 80 | 3300013308 | Ga0157375_10081733 | Ga0157375_100817334 | 256 |
| 81 | 3300014968 | Ga0157379_10177031 | Ga0157379_101770312 | 256 |
| 82 | 3300025206 | Ga0209435_100135 | Ga0209435_1001359 | 256 |
| 83 | 3300025246 | Ga0209646_1000406 | Ga0209646_10004069 | 256 |
| 84 | 3300025250 | Ga0209026_1000561 | Ga0209026_10005619 | 256 |
| 85 | 3300025256 | Ga0209759_1000805 | Ga0209759_10008059 | 256 |
| 86 | 3300025292 | Ga0209676_1000184 | Ga0209676_100018479 | 256 |
| 87 | 3300025292 | Ga0209676_1006788 | Ga0209676_10067886 | 256 |
| 88 | 3300025298 | Ga0209050_1000548 | Ga0209050_100054840 | 256 |
| 89 | 3300025298 | Ga0209050_1000620 | Ga0209050_100062045 | 256 |
| 90 | 3300025303 | Ga0209051_1003506 | Ga0209051_100350611 | 256 |
| 91 | 3300025304 | Ga0209257_1001202 | Ga0209257_10012022 | 256 |
| 92 | 3300025304 | Ga0209257_1049122 | Ga0209257_10491222 | 256 |
| 93 | 3300025900 | Ga0207710_10034444 | Ga0207710_100344443 | 256 |
| 94 | 3300025912 | Ga0207707_10032459 | Ga0207707_100324594 | 256 |
| 95 | 3300025913 | Ga0207695_10002305 | Ga0207695_100023059 | 256 |
| 96 | 3300025914 | Ga0207671_10323013 | Ga0207671_103230131 | 256 |
| 97 | 3300025917 | Ga0207660_10210695 | Ga0207660_102106952 | 256 |
| 98 | 3300025920 | Ga0207649_10053079 | Ga0207649_100530793 | 256 |
| 99 | 3300025921 | Ga0207652_10157184 | Ga0207652_101571841 | 256 |
| 100 | 3300025925 | Ga0207650_10038037 | Ga0207650_100380374 | 256 |
| 101 | 3300025927 | Ga0207687_10038495 | Ga0207687_100384953 | 256 |
| 102 | 3300025931 | Ga0207644_10066058 | Ga0207644_100660583 | 256 |
| 103 | 3300025933 | Ga0207706_10486731 | Ga0207706_104867311 | 256 |
| 104 | 3300025936 | Ga0207670_10067037 | Ga0207670_100670371 | 256 |
| 105 | 3300025945 | Ga0207679_10376743 | Ga0207679_103767431 | 256 |
| 106 | 3300025960 | Ga0207651_10353981 | Ga0207651_103539811 | 256 |
| 107 | 3300025961 | Ga0207712_10000002 | Ga0207712_1000000242 | 256 |
| 108 | 3300025961 | Ga0207712_10181667 | Ga0207712_101816673 | 256 |
| 109 | 3300026023 | Ga0207677_10182440 | Ga0207677_101824402 | 256 |
| 110 | 3300026041 | Ga0207639_10035347 | Ga0207639_100353473 | 256 |
| 111 | 3300026041 | Ga0207639_10080199 | Ga0207639_100801991 | 256 |
| 112 | 3300026088 | Ga0207641_10013719 | Ga0207641_100137192 | 256 |
| 113 | 3300026088 | Ga0207641_10193359 | Ga0207641_101933592 | 256 |
| 114 | 3300026116 | Ga0207674_10415890 | Ga0207674_104158902 | 256 |
| 115 | 3300028379 | Ga0268266_10013101 | Ga0268266_100131014 | 256 |
| 116 | 3300028380 | Ga0268265_10000463 | Ga0268265_1000046313 | 256 |
| 117 | 3300028381 | Ga0268264_10000369 | Ga0268264_1000036926 | 256 |
| 118 | 3300028786 | Ga0307517_10046003 | Ga0307517_100460034 | 256 |
| 119 | 3300031731 | Ga0307405_10219929 | Ga0307405_102199292 | 256 |
| 120 | 3300032004 | Ga0307414_10001484 | Ga0307414_100014842 | 256 |
| 121 | 3300032004 | Ga0307414_10390178 | Ga0307414_103901781 | 256 |
| 122 | 3300037471 | Ga0395905_0002592 | Ga0395905_0002592_9631_10437 | 256 |
| 123 | 3300041413 | Ga0439465_0000937 | Ga0439465_0000937_6777_7577 | 256 |
| 124 | 3300044658 | Ga0466972_0000046 | Ga0466972_0000046_39942_40718 | 256 |
| 125 | 3300044765 | Ga0466970_0003235 | Ga0466970_0003235_1654_2430 | 256 |
| 126 | 3300046457 | Ga0495590_0000224 | Ga0495590_0000224_6973_7761 | 256 |
| 127 | 3300046460 | Ga0495638_0000488 | Ga0495638_0000488_34376_35149 | 256 |
| 128 | 3300046463 | Ga0495653_0003197 | Ga0495653_0003197_6310_7098 | 256 |
| 129 | 3300046463 | Ga0495653_0008225 | Ga0495653_0008225_6059_6850 | 256 |
| 130 | 3300046472 | Ga0495580_0086543 | Ga0495580_0086543_324_1112 | 256 |
| 131 | 3300046473 | Ga0495582_0001791 | Ga0495582_0001791_6448_7236 | 256 |
| 132 | 3300046507 | Ga0495606_0095357 | Ga0495606_0095357_498_1379 | 256 |
| 133 | 3300046517 | Ga0495630_0222065 | Ga0495630_0222065_416_1204 | 256 |
| 134 | 3300046526 | Ga0495666_0002503 | Ga0495666_0002503_6917_7705 | 256 |
| 135 | 3300046529 | Ga0495652_0004366 | Ga0495652_0004366_4671_5459 | 256 |
| 136 | 3300046531 | Ga0495665_0006015 | Ga0495665_0006015_97_885 | 256 |
| 137 | 3300046535 | Ga0495586_0035923 | Ga0495586_0035923_651_1439 | 256 |
| 138 | 3300046536 | Ga0495587_0025235 | Ga0495587_0025235_764_1552 | 256 |
| 139 | 3300046557 | Ga0495622_0039199 | Ga0495622_0039199_446_1234 | 256 |
| 140 | 3300046616 | Ga0495668_0000067 | Ga0495668_0000067_135777_136556 | 256 |
| 141 | 3300046616 | Ga0495668_0000130 | Ga0495668_0000130_29504_30277 | 256 |
| 142 | 3300046642 | Ga0495634_0046499 | Ga0495634_0046499_50_838 | 256 |
| 143 | 3300046660 | Ga0495625_0000979 | Ga0495625_0000979_21914_22693 | 256 |
| 144 | 3300046660 | Ga0495625_0082575 | Ga0495625_0082575_1234_2007 | 256 |
| 145 | 3300046665 | Ga0495661_0036976 | Ga0495661_0036976_2094_2912 | 256 |
| 146 | 3300046665 | Ga0495661_0070031 | Ga0495661_0070031_300_1118 | 256 |
| 147 | 3300046674 | Ga0495588_0006088 | Ga0495588_0006088_4541_5329 | 256 |
| 148 | 3300046679 | Ga0495623_0031039 | Ga0495623_0031039_2175_2963 | 256 |
| 149 | 3300047317 | Ga0495604_0003732 | Ga0495604_0003732_8036_8824 | 256 |
| 150 | 3300047322 | Ga0495680_0117791 | Ga0495680_0117791_135_923 | 256 |
| 151 | 3300047469 | Ga0495673_0000115 | Ga0495673_0000115_69362_70141 | 256 |
| 152 | 3300047469 | Ga0495673_0002200 | Ga0495673_0002200_9923_10702 | 256 |
| 153 | 3300047472 | Ga0495686_0068478 | Ga0495686_0068478_72_845 | 256 |
| 154 | 3300048091 | Ga0495626_0030120 | Ga0495626_0030120_1030_1839 | 256 |
| 155 | 3300048911 | Ga0496108_0332377 | Ga0496108_0332377_427_1218 | 256 |
| 156 | 3300048916 | Ga0496113_0047639 | Ga0496113_0047639_759_1550 | 256 |
| 157 | 3300048924 | Ga0496121_0426877 | Ga0496121_0426877_27_800 | 256 |
| 158 | 3300048925 | Ga0496122_0020934 | Ga0496122_0020934_1404_2204 | 256 |
| 159 | 3300048925 | Ga0496122_0221343 | Ga0496122_0221343_57_857 | 256 |
| 160 | 3300048927 | Ga0496124_0038987 | Ga0496124_0038987_1478_2278 | 256 |
| 161 | 3300048929 | Ga0496126_0005038 | Ga0496126_0005038_12284_13084 | 256 |
| 162 | 3300049578 | Ga0501042_0194028 | Ga0501042_0194028_310_1083 | 256 |
| 163 | 3300050492 | nmdc:mga0yw44_66270_c1 | nmdc:mga0yw44_66270_c1_535_1305 | 256 |
| 164 | 3300050516 | nmdc:mga0sz30_32105_c1 | nmdc:mga0sz30_32105_c1_400_1170 | 256 |
| 165 | 3300053084 | Ga0495595_0043871 | Ga0495595_0043871_1185_1955 | 256 |
| 166 | 3300053085 | Ga0495619_0480478 | Ga0495619_0480478_61_831 | 256 |
| 167 | 3300053122 | Ga0500608_000135 | Ga0500608_000135_15412_16185 | 256 |
| 168 | 3300053131 | Ga0500652_129065 | Ga0500652_129065_152_946 | 256 |
| 169 | 3300053136 | Ga0500559_0003927 | Ga0500559_0003927_2414_3187 | 256 |
| 170 | 3300053156 | Ga0500622_0005037 | Ga0500622_0005037_6238_7011 | 256 |
| 171 | 3300002076 | JGI24749J21850_1000839 | JGI24749J21850_10008395 | 257 |
| 172 | 3300005293 | Ga0065715_10008721 | Ga0065715_100087212 | 257 |
| 173 | 3300005331 | Ga0070670_100011137 | Ga0070670_1000111375 | 257 |
| 174 | 3300005844 | Ga0068862_100384280 | Ga0068862_1003842802 | 257 |
| 175 | 3300009094 | Ga0111539_10380558 | Ga0111539_103805582 | 257 |
| 176 | 3300009553 | Ga0105249_10083915 | Ga0105249_100839153 | 257 |
| 177 | 3300014326 | Ga0157380_10013823 | Ga0157380_100138237 | 257 |
| 178 | 3300025925 | Ga0207650_10085855 | Ga0207650_100858553 | 257 |
| 179 | 3300028380 | Ga0268265_10451317 | Ga0268265_104513172 | 257 |
| 180 | 3300031824 | Ga0307413_10000677 | Ga0307413_100006772 | 257 |
| 181 | 3300031852 | Ga0307410_10004499 | Ga0307410_100044994 | 257 |
| 182 | 3300031852 | Ga0307410_10503589 | Ga0307410_105035892 | 257 |
| 183 | 3300031901 | Ga0307406_10230626 | Ga0307406_102306262 | 257 |
| 184 | 3300031903 | Ga0307407_10045950 | Ga0307407_100459503 | 257 |
| 185 | 3300031995 | Ga0307409_100031937 | Ga0307409_1000319376 | 257 |
| 186 | 3300031995 | Ga0307409_100084010 | Ga0307409_1000840101 | 257 |
| 187 | 3300031995 | Ga0307409_100283262 | Ga0307409_1002832622 | 257 |
| 188 | 3300032004 | Ga0307414_10068288 | Ga0307414_100682883 | 257 |
| 189 | 3300032004 | Ga0307414_10297647 | Ga0307414_102976471 | 257 |
| 190 | 3300032005 | Ga0307411_10000629 | Ga0307411_100006294 | 257 |
| 191 | 3300032005 | Ga0307411_10065013 | Ga0307411_100650132 | 257 |
| 192 | 3300032126 | Ga0307415_100654280 | Ga0307415_1006542801 | 257 |
| 193 | 3300032126 | Ga0307415_100794058 | Ga0307415_1007940581 | 257 |
| 194 | 3300042004 | Ga0439445_0002188 | Ga0439445_0002188_3398_4171 | 257 |
| 195 | 3300044656 | Ga0466969_0089383 | Ga0466969_0089383_147_956 | 257 |
| 196 | 3300044684 | Ga0466966_0034397 | Ga0466966_0034397_593_1366 | 257 |
| 197 | 3300045049 | Ga0466959_0020223 | Ga0466959_0020223_3302_4075 | 257 |
| 198 | 3300046528 | Ga0495642_0087976 | Ga0495642_0087976_188_961 | 257 |
| 199 | 3300046691 | Ga0495670_0031189 | Ga0495670_0031189_848_1621 | 257 |
| 200 | 3300049669 | Ga0501235_047837 | Ga0501235_047837_164_937 | 257 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6fke-assembly1.cif.gz_A | structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin | 0.9718 | 2 | 257 |
| 2jc4-assembly1.cif.gz_A | 3'-5' exonuclease (nexo) from neisseria meningitidis | 0.9714 | 1 | 257 |
| 2jc4-assembly1.cif.gz_A | 3'-5' exonuclease (nexo) from neisseria meningitidis | 0.964 | 1 | 257 |
| 2voa-assembly1.cif.gz_B | structure of an ap endonuclease from archaeoglobus fulgidus | 0.9584 | 1 | 257 |
| 1ako-assembly1.cif.gz_A | exonuclease iii from escherichia coli | 0.9348 | 1 | 257 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 6fk4A00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9756 | 2 | 257 | 3.60.10.10 |
| 2voaB00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9556 | 1 | 257 | 3.60.10.10 |
| 2voaB00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9447 | 1 | 257 | 3.60.10.10 |
| af_P96273_24_289_3.60.10.10 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.942 | 1 | 257 | 3.60.10.10 |
| af_P09030_1_268_3.60.10.10 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9411 | 1 | 257 | 3.60.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2W5ADH5-F1-model_v4 | Exodeoxyribonuclease III | 1 | 1 | 128 |
GO:0003677
GO:0004519 GO:0006281 GO:0008311 GO:0046872 |
| AF-A0A5C8A1G2-F1-model_v4 | deleted | 0.9947 | 1 | 257 |
|
| AF-A0A2W5R7Q2-F1-model_v4 | deleted | 0.9942 | 1 | 256 |
|
| AF-A0A6I4TNN4-F1-model_v4 | Exodeoxyribonuclease III (EC 3.1.11.2) | 0.9938 | 1 | 256 |
GO:0006281
GO:0008311 GO:0046872 |
| AF-A0A3S1YX56-F1-model_v4 | deleted | 0.9938 | 1 | 106 |
|
Predicted Structure (AlphaFold2)
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