F305509

General Info

Members Datasets Scaffolds Average Seq Length
199 135 398 581

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100044802|Ga0070706_1000448021
Length 619
Sequence VIRGGYFGRFLRVDTGSGRATVVPIAPAVLESVIGGVGLGTYLLARETPAGFDPYGPEAAVVFAFGPLVGTPLTTSAKFAVVTKSPLTDRLTDSLSSSAFALSGKRTGFDALVLVGRAERPSVVLIDGDRVEIAECSDLWDTDLGVSDATAALAKRFPRYELATIGVAGERLVRYAGLANGGRHAGRGGIGAVLGSKRIKAIGVRGSERVPLADAARTVALSRDLARRSLGPATEKYRELGTVANLATFNRLAALPTRNFQQATFEGAAAISGEVLKVTREKGRGSCAACTIGCEHFYEVERGAAPVKAEYENLFALGPLCGISDPDVVLAASRACDELGLDTISAGGTIAFAMECSERGLLDRGPWGDQAKGLRFGDGARLLTLLDDIAHRRGALGDLLAEGSRRAARAIGPPAPDFAPHVKGLEIPGYEPRALQSMALGFAVGSRGADHNRSGAYEVDFSGKVDRFAGSPEGARLAVETEDRAALLDALILCKFLRGALRDPSAEAAEMLRAVTGIEFSADDTRAAAARIVLLKKLFNVREGWTAAEDTLPARFFDDALPDGVSRGAVLSRDGLDAMIAAYYAARGWRADGSVPGTLVAAAGLESVASRRTGDTTSA

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
93 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
94 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
95 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
108 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
111 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
114 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
127 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
133 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
134 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
135 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.5
Nodule 0
Rhizoplane 1.01
Rhizosphere 96.48
Stem 0
Stem Tuber 0
Unclassified 7.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100044802 3300005467 Bacteria 4086
2 JGI25406J46586_10001634 3300003203 Bacteria 10574
3 JGI25406J46586_10024810 3300003203 Bacteria 2342
4 Ga0065704_10002890 3300005289 Bacteria 7241
5 Ga0065712_10070960 3300005290 Bacteria 5577
6 Ga0065707_10007709 3300005295 Bacteria 2805
7 Ga0070676_10005832 3300005328 Bacteria 6570
8 Ga0070683_100014529 3300005329 Bacteria 6891
9 Ga0070683_100039893 3300005329 Unclassified 4313
10 Ga0070670_100006733 3300005331 Bacteria 9742
11 Ga0068869_100011598 3300005334 Bacteria 5787
12 Ga0068869_100033749 3300005334 Bacteria 3614
13 Ga0068869_100058627 3300005334 Bacteria 2816
14 Ga0070666_10016410 3300005335 Bacteria 4738
15 Ga0070682_100002729 3300005337 Bacteria 9781
16 Ga0068868_100026548 3300005338 Bacteria 4415
17 Ga0070689_100080750 3300005340 Bacteria 2552
18 Ga0070689_100131516 3300005340 Bacteria 2007
19 Ga0070691_10038863 3300005341 Bacteria 2247
20 Ga0070669_100002688 3300005353 Bacteria 12814
21 Ga0070669_100008178 3300005353 Bacteria 7471
22 Ga0070669_100058760 3300005353 Unclassified 2822
23 Ga0070669_100107020 3300005353 Bacteria 2118
24 Ga0070675_100008914 3300005354 Bacteria 7794
25 Ga0070675_100029986 3300005354 Bacteria 4389
26 Ga0070671_100027978 3300005355 Unclassified 4642
27 Ga0070671_100049122 3300005355 Unclassified 3510
28 Ga0070673_100011616 3300005364 Bacteria 6016
29 Ga0070688_100018781 3300005365 Bacteria 3997
30 Ga0070667_100035520 3300005367 Bacteria 4176
31 Ga0070714_100024342 3300005435 Bacteria 4984
32 Ga0070705_100000493 3300005440 Bacteria 22752
33 Ga0070700_100001213 3300005441 Bacteria 12780
34 Ga0070700_100029036 3300005441 Bacteria 3294
35 Ga0070694_100000044 3300005444 Bacteria 58304
36 Ga0070694_100000733 3300005444 Bacteria 18330
37 Ga0070694_100077976 3300005444 Unclassified 2297
38 Ga0070662_100033692 3300005457 Bacteria 3608
39 Ga0070662_100044220 3300005457 Bacteria 3189
40 Ga0070698_100035183 3300005471 Bacteria 5180
41 Ga0070699_100001609 3300005518 Bacteria 20621
42 Ga0070699_100011169 3300005518 Bacteria 7762
43 Ga0070697_100022313 3300005536 Bacteria 5024
44 Ga0070695_100000103 3300005545 Bacteria 37184
45 Ga0070695_100009115 3300005545 Bacteria 5898
46 Ga0070696_100000056 3300005546 Bacteria 53352
47 Ga0070696_100010045 3300005546 Bacteria 6333
48 Ga0070664_100005893 3300005564 Bacteria 9897
49 Ga0070664_100030472 3300005564 Unclassified 4501
50 Ga0070664_100045969 3300005564 Bacteria 3687
51 Ga0068857_100020644 3300005577 Bacteria 5796
52 Ga0068854_100007612 3300005578 Bacteria 6926
53 Ga0068854_100133645 3300005578 Bacteria 1897
54 Ga0070702_100019989 3300005615 Bacteria 3502
55 Ga0068864_100062684 3300005618 Bacteria 3222
56 Ga0068861_100002892 3300005719 Bacteria 11316
57 Ga0068870_10002044 3300005840 Bacteria 8344
58 Ga0068863_100016282 3300005841 Bacteria 7135
59 Ga0068863_100035378 3300005841 Bacteria 4757
60 Ga0068862_100032213 3300005844 Bacteria 4428
61 Ga0081539_10000108 3300005985 Bacteria 195322
62 Ga0081539_10002115 3300005985 Bacteria 29417
63 Ga0070712_100005317 3300006175 Bacteria 7970
64 Ga0097621_100000963 3300006237 Bacteria 20188
65 Ga0097621_100026813 3300006237 Bacteria 4524
66 Ga0068871_100000913 3300006358 Bacteria 19682
67 Ga0075428_100016608 3300006844 Bacteria 8129
68 Ga0075428_100031445 3300006844 Bacteria 5867
69 Ga0075428_100033913 3300006844 Bacteria 5631
70 Ga0075428_100195867 3300006844 Bacteria 2185
71 Ga0075430_100043028 3300006846 Bacteria 3818
72 Ga0075431_100007208 3300006847 Bacteria 11060
73 Ga0075433_10006496 3300006852 Bacteria 9244
74 Ga0075433_10051683 3300006852 Bacteria 3580
75 Ga0075433_10088760 3300006852 Unclassified 2732
76 Ga0075434_100002675 3300006871 Bacteria 15739
77 Ga0075434_100010429 3300006871 Bacteria 8709
78 Ga0075435_100006090 3300007076 Bacteria 8498
79 Ga0075435_100040762 3300007076 Bacteria 3709
80 Ga0111539_10008253 3300009094 Bacteria 13258
81 Ga0111539_10027559 3300009094 Bacteria 6940
82 Ga0105245_10021688 3300009098 Bacteria 5638
83 Ga0114129_10004021 3300009147 Bacteria 20743
84 Ga0114129_10012911 3300009147 Bacteria 11885
85 Ga0114129_10021780 3300009147 Bacteria 9098
86 Ga0114129_10064022 3300009147 Bacteria 5131
87 Ga0114129_10066502 3300009147 Bacteria 5029
88 Ga0114129_10106132 3300009147 Bacteria 3881
89 Ga0105243_10170842 3300009148 Bacteria 1883
90 Ga0105242_10011373 3300009176 Bacteria 6843
91 Ga0105248_10002458 3300009177 Bacteria 20592
92 Ga0105249_10030649 3300009553 Bacteria 4863
93 Ga0105249_10117109 3300009553 Bacteria 2526
94 Ga0163162_10002075 3300013306 Bacteria 18823
95 Ga0157380_10065909 3300014326 Unclassified 2912
96 Ga0157379_10002780 3300014968 Bacteria 14751
97 Ga0157376_10020982 3300014969 Bacteria 5066
98 Ga0157376_10066153 3300014969 Bacteria 3055
99 Ga0213875_10018506 3300021388 Bacteria 3356
100 Ga0207680_10008780 3300025903 Bacteria 4980
101 Ga0207645_10000510 3300025907 Bacteria 32174
102 Ga0207643_10002297 3300025908 Bacteria 10393
103 Ga0207684_10033444 3300025910 Bacteria 4372
104 Ga0207693_10002111 3300025915 Bacteria 17348
105 Ga0207662_10006017 3300025918 Bacteria 6522
106 Ga0207681_10033093 3300025923 Bacteria 3388
107 Ga0207681_10096246 3300025923 Bacteria 2125
108 Ga0207650_10013452 3300025925 Bacteria 5666
109 Ga0207659_10044275 3300025926 Bacteria 3130
110 Ga0207700_10081146 3300025928 Bacteria 2532
111 Ga0207706_10025203 3300025933 Bacteria 5332
112 Ga0207686_10008062 3300025934 Bacteria 5683
113 Ga0207709_10016710 3300025935 Bacteria 4084
114 Ga0207704_10026583 3300025938 Bacteria 3178
115 Ga0207691_10003060 3300025940 Bacteria 16318
116 Ga0207711_10005831 3300025941 Bacteria 10405
117 Ga0207689_10047749 3300025942 Bacteria 3532
118 Ga0207679_10006554 3300025945 Bacteria 7359
119 Ga0207679_10011690 3300025945 Bacteria 5699
120 Ga0207679_10020635 3300025945 Unclassified 4449
121 Ga0207651_10006160 3300025960 Bacteria 6240
122 Ga0207651_10149014 3300025960 Bacteria 1818
123 Ga0207658_10029375 3300025986 Bacteria 3882
124 Ga0207703_10002781 3300026035 Bacteria 14975
125 Ga0207703_10035993 3300026035 Bacteria 3937
126 Ga0207708_10001363 3300026075 Bacteria 18364
127 Ga0207648_10016453 3300026089 Bacteria 6755
128 Ga0207648_10045493 3300026089 Bacteria 3850
129 Ga0207676_10141344 3300026095 Bacteria 2061
130 Ga0207674_10048021 3300026116 Unclassified 4372
131 Ga0207428_10000145 3300027907 Bacteria 96603
132 Ga0268265_10037780 3300028380 Bacteria 3546
133 Ga0268265_10045424 3300028380 Bacteria 3278
134 Ga0265332_10013839 3300031238 Bacteria 3572
135 Ga0265327_10005066 3300031251 Bacteria 11238
136 Ga0307407_10008115 3300031903 Bacteria 4797
137 Ga0373949_0000455 3300035090 Bacteria 14131
138 Ga0373946_0002091 3300035171 Bacteria 7017
139 Ga0373961_0000098 3300035241 Bacteria 46884
140 Ga0373924_0000600 3300035410 Bacteria 11123
141 Ga0373937_0153101 3300036401 Bacteria 2160
142 Ga0373925_0009544 3300037068 Bacteria 7067
143 Ga0436364_0185366 3300037853 Bacteria 18300
144 Ga0436364_1305920 3300037853 Bacteria 4579
145 Ga0436364_1332124 3300037853 Bacteria 10510
146 Ga0439433_0005559 3300041999 Bacteria 2705
147 Ga0451576_0022889 3300045051 Bacteria 6770
148 Ga0451576_0129342 3300045051 Bacteria 2632
149 Ga0495592_0007504 3300046454 Bacteria 8166
150 Ga0495629_0071031 3300046459 Bacteria 2430
151 Ga0495651_0004659 3300046462 Bacteria 10489
152 Ga0495653_0040780 3300046463 Bacteria 3626
153 Ga0495608_0001641 3300046511 Bacteria 16073
154 Ga0495608_0003354 3300046511 Bacteria 11453
155 Ga0495608_0007448 3300046511 Bacteria 7734
156 Ga0495608_0029021 3300046511 Unclassified 3757
157 Ga0495628_0031413 3300046516 Bacteria 4296
158 Ga0495633_0020490 3300046558 Bacteria 3325
159 Ga0495667_0018399 3300046559 Bacteria 4718
160 Ga0495634_0013854 3300046642 Bacteria 5826
161 Ga0495634_0032117 3300046642 Bacteria 3612
162 Ga0495659_0024198 3300046664 Unclassified 2069
163 Ga0495588_0002614 3300046674 Bacteria 7710
164 Ga0495657_0012446 3300046675 Bacteria 6323
165 Ga0495599_0018205 3300046678 Bacteria 4376
166 Ga0495646_0006245 3300046680 Bacteria 7555
167 Ga0495658_0066935 3300046683 Unclassified 2076
168 Ga0495669_0028979 3300046684 Bacteria 2426
169 Ga0495613_0000318 3300046689 Bacteria 43663
170 Ga0495600_0005520 3300046809 Bacteria 7629
171 Ga0495600_0046380 3300046809 Bacteria 2835
172 Ga0495674_0008070 3300047319 Bacteria 10052
173 Ga0495674_0010660 3300047319 Bacteria 8698
174 Ga0495680_0004475 3300047322 Bacteria 13361
175 Ga0495684_0000053 3300047471 Bacteria 82157
176 Ga0495684_0022916 3300047471 Bacteria 4803
177 Ga0496105_0129721 3300048908 Bacteria 2079
178 Ga0496112_0003799 3300048915 Bacteria 12620
179 Ga0501039_0059870 3300049575 Bacteria 2949
180 nmdc:mga05p37_162454_c1 3300050507 Bacteria 2727
181 nmdc:mga05p37_23632_c1 3300050507 Bacteria 7462
182 nmdc:mga05p37_24304_c1 3300050507 Bacteria 7363
183 nmdc:mga09592_94437_c1 3300050508 Bacteria 2558
184 nmdc:mga0qj67_74605_c1 3300050509 Bacteria 2711
185 nmdc:mga06r32_55111_c1 3300050510 Bacteria 3814
186 nmdc:mga08y16_18132_c1 3300050511 Bacteria 7415
187 nmdc:mga08y16_1972_c1 3300050511 Bacteria 20917
188 nmdc:mga08y16_88126_c1 3300050511 Bacteria 3234
189 nmdc:mga0rr50_103243_c1 3300050513 Bacteria 2243
190 nmdc:mga0rr50_2834_c1 3300050513 Bacteria 9860
191 nmdc:mga0a205_9407_c1 3300050515 Bacteria 8932
192 Ga0495601_0000194 3300053077 Bacteria 32180
193 Ga0495601_0001144 3300053077 Bacteria 14525
194 Ga0495601_0016292 3300053077 Bacteria 4504
195 Ga0495601_0046294 3300053077 Unclassified 2738
196 Ga0495595_0023099 3300053084 Bacteria 2735
197 Ga0495595_0028201 3300053084 Bacteria 2507
198 Ga0495619_0001948 3300053085 Bacteria 13755
199 Ga0500597_008434 3300053120 Bacteria 3564
200 Ga0070706_100044802
201 JGI25406J46586_10001634
202 JGI25406J46586_10024810
203 Ga0065704_10002890
204 Ga0065712_10070960
205 Ga0065707_10007709
206 Ga0070676_10005832
207 Ga0070683_100014529
208 Ga0070683_100039893
209 Ga0070670_100006733
210 Ga0068869_100011598
211 Ga0068869_100033749
212 Ga0068869_100058627
213 Ga0070666_10016410
214 Ga0070682_100002729
215 Ga0068868_100026548
216 Ga0070689_100080750
217 Ga0070689_100131516
218 Ga0070691_10038863
219 Ga0070669_100002688
220 Ga0070669_100008178
221 Ga0070669_100058760
222 Ga0070669_100107020
223 Ga0070675_100008914
224 Ga0070675_100029986
225 Ga0070671_100027978
226 Ga0070671_100049122
227 Ga0070673_100011616
228 Ga0070688_100018781
229 Ga0070667_100035520
230 Ga0070714_100024342
231 Ga0070705_100000493
232 Ga0070700_100001213
233 Ga0070700_100029036
234 Ga0070694_100000044
235 Ga0070694_100000733
236 Ga0070694_100077976
237 Ga0070662_100033692
238 Ga0070662_100044220
239 Ga0070698_100035183
240 Ga0070699_100001609
241 Ga0070699_100011169
242 Ga0070697_100022313
243 Ga0070695_100000103
244 Ga0070695_100009115
245 Ga0070696_100000056
246 Ga0070696_100010045
247 Ga0070664_100005893
248 Ga0070664_100030472
249 Ga0070664_100045969
250 Ga0068857_100020644
251 Ga0068854_100007612
252 Ga0068854_100133645
253 Ga0070702_100019989
254 Ga0068864_100062684
255 Ga0068861_100002892
256 Ga0068870_10002044
257 Ga0068863_100016282
258 Ga0068863_100035378
259 Ga0068862_100032213
260 Ga0081539_10000108
261 Ga0081539_10002115
262 Ga0070712_100005317
263 Ga0097621_100000963
264 Ga0097621_100026813
265 Ga0068871_100000913
266 Ga0075428_100016608
267 Ga0075428_100031445
268 Ga0075428_100033913
269 Ga0075428_100195867
270 Ga0075430_100043028
271 Ga0075431_100007208
272 Ga0075433_10006496
273 Ga0075433_10051683
274 Ga0075433_10088760
275 Ga0075434_100002675
276 Ga0075434_100010429
277 Ga0075435_100006090
278 Ga0075435_100040762
279 Ga0111539_10008253
280 Ga0111539_10027559
281 Ga0105245_10021688
282 Ga0114129_10004021
283 Ga0114129_10012911
284 Ga0114129_10021780
285 Ga0114129_10064022
286 Ga0114129_10066502
287 Ga0114129_10106132
288 Ga0105243_10170842
289 Ga0105242_10011373
290 Ga0105248_10002458
291 Ga0105249_10030649
292 Ga0105249_10117109
293 Ga0163162_10002075
294 Ga0157380_10065909
295 Ga0157379_10002780
296 Ga0157376_10020982
297 Ga0157376_10066153
298 Ga0213875_10018506
299 Ga0207680_10008780
300 Ga0207645_10000510
301 Ga0207643_10002297
302 Ga0207684_10033444
303 Ga0207693_10002111
304 Ga0207662_10006017
305 Ga0207681_10033093
306 Ga0207681_10096246
307 Ga0207650_10013452
308 Ga0207659_10044275
309 Ga0207700_10081146
310 Ga0207706_10025203
311 Ga0207686_10008062
312 Ga0207709_10016710
313 Ga0207704_10026583
314 Ga0207691_10003060
315 Ga0207711_10005831
316 Ga0207689_10047749
317 Ga0207679_10006554
318 Ga0207679_10011690
319 Ga0207679_10020635
320 Ga0207651_10006160
321 Ga0207651_10149014
322 Ga0207658_10029375
323 Ga0207703_10002781
324 Ga0207703_10035993
325 Ga0207708_10001363
326 Ga0207648_10016453
327 Ga0207648_10045493
328 Ga0207676_10141344
329 Ga0207674_10048021
330 Ga0207428_10000145
331 Ga0268265_10037780
332 Ga0268265_10045424
333 Ga0265332_10013839
334 Ga0265327_10005066
335 Ga0307407_10008115
336 Ga0373949_0000455
337 Ga0373946_0002091
338 Ga0373961_0000098
339 Ga0373924_0000600
340 Ga0373937_0153101
341 Ga0373925_0009544
342 Ga0436364_0185366
343 Ga0436364_1305920
344 Ga0436364_1332124
345 Ga0439433_0005559
346 Ga0451576_0022889
347 Ga0451576_0129342
348 Ga0495592_0007504
349 Ga0495629_0071031
350 Ga0495651_0004659
351 Ga0495653_0040780
352 Ga0495608_0001641
353 Ga0495608_0003354
354 Ga0495608_0007448
355 Ga0495608_0029021
356 Ga0495628_0031413
357 Ga0495633_0020490
358 Ga0495667_0018399
359 Ga0495634_0013854
360 Ga0495634_0032117
361 Ga0495659_0024198
362 Ga0495588_0002614
363 Ga0495657_0012446
364 Ga0495599_0018205
365 Ga0495646_0006245
366 Ga0495658_0066935
367 Ga0495669_0028979
368 Ga0495613_0000318
369 Ga0495600_0005520
370 Ga0495600_0046380
371 Ga0495674_0008070
372 Ga0495674_0010660
373 Ga0495680_0004475
374 Ga0495684_0000053
375 Ga0495684_0022916
376 Ga0496105_0129721
377 Ga0496112_0003799
378 Ga0501039_0059870
379 nmdc:mga05p37_162454_c1
380 nmdc:mga05p37_23632_c1
381 nmdc:mga05p37_24304_c1
382 nmdc:mga09592_94437_c1
383 nmdc:mga0qj67_74605_c1
384 nmdc:mga06r32_55111_c1
385 nmdc:mga08y16_18132_c1
386 nmdc:mga08y16_1972_c1
387 nmdc:mga08y16_88126_c1
388 nmdc:mga0rr50_103243_c1
389 nmdc:mga0rr50_2834_c1
390 nmdc:mga0a205_9407_c1
391 Ga0495601_0000194
392 Ga0495601_0001144
393 Ga0495601_0016292
394 Ga0495601_0046294
395 Ga0495595_0023099
396 Ga0495595_0028201
397 Ga0495619_0001948
398 Ga0500597_008434

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02730

AFOR_N

Aldehyde ferredoxin oxidoreductase, N-terminal domain

8

207

0.98

PF01314

AFOR_C

Aldehyde ferredoxin oxidoreductase, domains 2 & 3

223

605

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1aor-assembly1.cif.gz_A structure of a hyperthermophilic tungstopterin enzyme, aldehyde ferredoxin oxidoreductase 0.9252 2 575
1aor-assembly1.cif.gz_A structure of a hyperthermophilic tungstopterin enzyme, aldehyde ferredoxin oxidoreductase 0.9191 2 575
8c0z-assembly1.cif.gz_B cryoem structure of a tungsten-containing aldehyde oxidoreductase from aromatoleum aromaticum 0.9085 4 575
1b4n-assembly1.cif.gz_D formaldehyde ferredoxin oxidoreductase from pyrococcus furiosus, complexed with glutarate 0.9019 2 575
8c0z-assembly1.cif.gz_B cryoem structure of a tungsten-containing aldehyde oxidoreductase from aromatoleum aromaticum 0.8995 4 575
ID Description Score Start End Superfamily
1b4nB01 Alpha Beta;4-Layer Sandwich;Aldehyde Ferredoxin Oxidoreductase;;Aldehyde ferredoxin oxidoreductase, N-terminal domain 0.954 2 209 3.60.9.10
4z3wA01 Alpha Beta;4-Layer Sandwich;Aldehyde Ferredoxin Oxidoreductase;;Aldehyde ferredoxin oxidoreductase, N-terminal domain 0.9492 1 209 3.60.9.10
1b4nB01 Alpha Beta;4-Layer Sandwich;Aldehyde Ferredoxin Oxidoreductase;;Aldehyde ferredoxin oxidoreductase, N-terminal domain 0.9452 2 209 3.60.9.10
4z3wA01 Alpha Beta;4-Layer Sandwich;Aldehyde Ferredoxin Oxidoreductase;;Aldehyde ferredoxin oxidoreductase, N-terminal domain 0.9363 1 209 3.60.9.10
af_P76192_1_210_3.60.9.10 Alpha Beta;4-Layer Sandwich;Aldehyde Ferredoxin Oxidoreductase;;Aldehyde ferredoxin oxidoreductase, N-terminal domain 0.9173 1 209 3.60.9.10
ID Description Score Start End GO Terms
AF-A0A382LA28-F1-model_v4 Aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein 0.9761 2 205 GO:0016625
GO:0051536
AF-A0A382LA28-F1-model_v4 Aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein 0.9667 2 205 GO:0016625
GO:0051536
AF-A0A2V8GRB9-F1-model_v4 Aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein 0.9664 1 138 GO:0016625
GO:0051536
AF-X0TDS9-F1-model_v4 Aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein 0.9657 2 204 GO:0016625
GO:0051536
AF-A0A523RS40-F1-model_v4 Aldehyde ferredoxin oxidoreductase 0.9654 2 222 GO:0016625
GO:0051536

Map