F305427

General Info

Members Datasets Scaffolds Average Seq Length
199 141 398 237

Family's Representative Sequence

Representative Sequence 3300005364|Ga0070673_100182585|Ga0070673_1001825853
Length 227
Sequence VSAGRLYLLPAPLSEDTPPQDVVPAPVLERIRALDRFVVENAKSARAWLAACGHPMPIREISMSELNEHTPAAGVPALLDPVLDGHDVGLLSEGALLVAAAHAKGVVVVPCVGPSSILLALAASGLDGQRFRFVGYLPADAAARRDALVELEKRSARDRETQVFIETPYRNDAMLAEIVKSCRPATRVAIAAELTSPRESVVMDTVAGWKRRAATIGKRTAIFLLLA

Samples

Sample ID Description Type Environment
1 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
101 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
102 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
118 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
138 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.51
Nodule 0
Rhizoplane 1.51
Rhizosphere 96.48
Stem 0
Stem Tuber 0
Unclassified 2.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070673_100182585 3300005364 Bacteria 1797
2 Ga0070658_10002135 3300005327 Bacteria 16594
3 Ga0070658_10048213 3300005327 Bacteria 3448
4 Ga0070658_10102244 3300005327 Bacteria 2370
5 Ga0070683_100129472 3300005329 Bacteria 2388
6 Ga0070690_100067600 3300005330 Bacteria 2316
7 Ga0070680_100393023 3300005336 Bacteria 1181
8 Ga0070660_100197995 3300005339 Bacteria 1629
9 Ga0070689_100154953 3300005340 Bacteria 1849
10 Ga0070687_100106126 3300005343 Bacteria 1582
11 Ga0070669_100212211 3300005353 Bacteria 1528
12 Ga0070675_100571666 3300005354 Unclassified 1023
13 Ga0070674_100042034 3300005356 Bacteria 3103
14 Ga0070673_100557899 3300005364 Bacteria 1041
15 Ga0070688_100057678 3300005365 Bacteria 2442
16 Ga0070659_100035621 3300005366 Bacteria 3876
17 Ga0070714_100580037 3300005435 Bacteria 1076
18 Ga0070678_100831495 3300005456 Bacteria 840
19 Ga0070681_10039611 3300005458 Bacteria 4723
20 Ga0070681_10157148 3300005458 Bacteria 2198
21 Ga0070681_10404159 3300005458 Bacteria 1277
22 Ga0068867_100032509 3300005459 Bacteria 3774
23 Ga0068867_100091061 3300005459 Bacteria 2315
24 Ga0070685_10019821 3300005466 Bacteria 3634
25 Ga0070698_100254994 3300005471 Bacteria 1687
26 Ga0070698_100270801 3300005471 Bacteria 1630
27 Ga0070699_100058688 3300005518 Bacteria 3334
28 Ga0070679_100152666 3300005530 Bacteria 2286
29 Ga0070684_100066645 3300005535 Bacteria 3160
30 Ga0070684_100433702 3300005535 Bacteria 1214
31 Ga0070672_100015276 3300005543 Bacteria 5462
32 Ga0070693_100005743 3300005547 Bacteria 5993
33 Ga0070704_100029583 3300005549 Bacteria 3660
34 Ga0068855_100005520 3300005563 Bacteria 15434
35 Ga0068855_100007589 3300005563 Bacteria 13122
36 Ga0068855_100056280 3300005563 Bacteria 4615
37 Ga0068855_100150164 3300005563 Bacteria 2650
38 Ga0068857_100091310 3300005577 Bacteria 2726
39 Ga0068854_100528681 3300005578 Unclassified 997
40 Ga0068856_100089060 3300005614 Bacteria 3069
41 Ga0068856_100326528 3300005614 Bacteria 1552
42 Ga0068852_100005046 3300005616 Bacteria 9387
43 Ga0068852_100011457 3300005616 Bacteria 6677
44 Ga0068859_100088910 3300005617 Bacteria 3138
45 Ga0068851_10001274 3300005834 Bacteria 10990
46 Ga0068863_100076568 3300005841 Bacteria 3165
47 Ga0068858_100773852 3300005842 Bacteria 936
48 Ga0068862_100076811 3300005844 Bacteria 2890
49 Ga0068862_100505329 3300005844 Bacteria 1148
50 Ga0075364_10241534 3300006051 Bacteria 1227
51 Ga0075366_10007734 3300006195 Bacteria 5953
52 Ga0097621_100008700 3300006237 Bacteria 7330
53 Ga0097621_100075962 3300006237 Bacteria 2786
54 Ga0097621_100127185 3300006237 Bacteria 2165
55 Ga0068871_100019888 3300006358 Bacteria 5133
56 Ga0068871_100055559 3300006358 Bacteria 3214
57 Ga0068871_100124740 3300006358 Bacteria 2178
58 Ga0075428_100079307 3300006844 Bacteria 3584
59 Ga0075434_100315107 3300006871 Bacteria 1585
60 Ga0075436_100000987 3300006914 Bacteria 19077
61 Ga0097620_100088912 3300006931 Bacteria 3138
62 Ga0075435_100137494 3300007076 Bacteria 2048
63 Ga0075435_100164444 3300007076 Bacteria 1871
64 Ga0075435_100328680 3300007076 Bacteria 1309
65 Ga0105240_10002905 3300009093 Bacteria 27041
66 Ga0105240_10075359 3300009093 Bacteria 4161
67 Ga0111539_10001609 3300009094 Bacteria 30148
68 Ga0105245_10095835 3300009098 Bacteria 2737
69 Ga0105245_10154660 3300009098 Bacteria 2171
70 Ga0114129_10236391 3300009147 Bacteria 2458
71 Ga0105241_10057696 3300009174 Bacteria 2979
72 Ga0105241_10241238 3300009174 Bacteria 1528
73 Ga0105242_10001746 3300009176 Bacteria 17183
74 Ga0105242_10262658 3300009176 Bacteria 1560
75 Ga0105248_10177836 3300009177 Bacteria 2398
76 Ga0105248_10808500 3300009177 Bacteria 1058
77 Ga0105238_10016679 3300009551 Bacteria 7441
78 Ga0105249_10944158 3300009553 Bacteria 930
79 Ga0157370_10075694 3300013104 Bacteria 3172
80 Ga0157370_10256478 3300013104 Bacteria 1616
81 Ga0157369_10513644 3300013105 Bacteria 1239
82 Ga0157374_10107657 3300013296 Bacteria 2679
83 Ga0157378_10036316 3300013297 Bacteria 4361
84 Ga0157372_10011481 3300013307 Bacteria 9420
85 Ga0157372_10226861 3300013307 Bacteria 2166
86 Ga0157372_10401876 3300013307 Bacteria 1596
87 Ga0157375_10278987 3300013308 Bacteria 1834
88 Ga0157380_10294886 3300014326 Bacteria 1491
89 Ga0157376_10213166 3300014969 Bacteria 1784
90 Ga0207656_10000660 3300025321 Bacteria 11288
91 Ga0207688_10093578 3300025901 Bacteria 1728
92 Ga0207688_10102045 3300025901 Bacteria 1658
93 Ga0207643_10259825 3300025908 Bacteria 1072
94 Ga0207705_10004289 3300025909 Bacteria 10796
95 Ga0207705_10019000 3300025909 Bacteria 4915
96 Ga0207705_10047103 3300025909 Bacteria 3099
97 Ga0207705_10052928 3300025909 Bacteria 2924
98 Ga0207705_10222832 3300025909 Bacteria 1433
99 Ga0207654_10013228 3300025911 Bacteria 4241
100 Ga0207707_10021942 3300025912 Bacteria 5580
101 Ga0207707_10242041 3300025912 Bacteria 1568
102 Ga0207695_10002497 3300025913 Bacteria 27080
103 Ga0207662_10107936 3300025918 Bacteria 1732
104 Ga0207662_10208767 3300025918 Bacteria 1267
105 Ga0207646_10531718 3300025922 Bacteria 1058
106 Ga0207694_10051941 3300025924 Bacteria 3177
107 Ga0207694_10259963 3300025924 Bacteria 1422
108 Ga0207659_10009165 3300025926 Bacteria 6181
109 Ga0207659_10265683 3300025926 Bacteria 1398
110 Ga0207664_10112502 3300025929 Bacteria 2266
111 Ga0207690_10036900 3300025932 Bacteria 3169
112 Ga0207686_10012920 3300025934 Bacteria 4606
113 Ga0207686_10091339 3300025934 Bacteria 2011
114 Ga0207686_10128403 3300025934 Bacteria 1735
115 Ga0207709_10115489 3300025935 Bacteria 1803
116 Ga0207709_10289744 3300025935 Bacteria 1213
117 Ga0207669_10038579 3300025937 Bacteria 2752
118 Ga0207669_10553682 3300025937 Bacteria 928
119 Ga0207704_10162292 3300025938 Bacteria 1592
120 Ga0207691_10010003 3300025940 Bacteria 9106
121 Ga0207711_10115555 3300025941 Bacteria 2391
122 Ga0207711_10163286 3300025941 Bacteria 2018
123 Ga0207661_10272407 3300025944 Bacteria 1511
124 Ga0207667_10007133 3300025949 Bacteria 13491
125 Ga0207667_10013536 3300025949 Bacteria 9327
126 Ga0207667_10035593 3300025949 Bacteria 5341
127 Ga0207667_10059192 3300025949 Bacteria 4014
128 Ga0207667_10173331 3300025949 Bacteria 2217
129 Ga0207651_10063856 3300025960 Bacteria 2574
130 Ga0207712_10427634 3300025961 Bacteria 1118
131 Ga0207640_10621202 3300025981 Unclassified 917
132 Ga0207677_10095041 3300026023 Bacteria 2177
133 Ga0207677_10303837 3300026023 Bacteria 1319
134 Ga0207641_10395040 3300026088 Unclassified 1327
135 Ga0207641_10435376 3300026088 Bacteria 1265
136 Ga0207648_10269098 3300026089 Bacteria 1522
137 Ga0207674_10097603 3300026116 Bacteria 2922
138 Ga0207675_100250589 3300026118 Bacteria 1714
139 Ga0207683_10680610 3300026121 Bacteria 953
140 Ga0207698_10008585 3300026142 Bacteria 6472
141 Ga0207698_10433123 3300026142 Unclassified 1265
142 Ga0207698_10463089 3300026142 Bacteria 1226
143 Ga0207428_10019042 3300027907 Bacteria 5854
144 Ga0268265_10068153 3300028380 Bacteria 2758
145 Ga0265340_10126705 3300031247 Bacteria 1173
146 Ga0307408_100030045 3300031548 Bacteria 3771
147 Ga0307408_100431066 3300031548 Bacteria 1139
148 Ga0307405_10049134 3300031731 Bacteria 2606
149 Ga0307416_100119716 3300032002 Bacteria 2343
150 Ga0307416_100292345 3300032002 Bacteria 1614
151 Ga0307416_100361290 3300032002 Bacteria 1474
152 Ga0307415_100187631 3300032126 Bacteria 1629
153 Ga0373955_0016431 3300035172 Bacteria 3643
154 Ga0373942_0115245 3300035207 Bacteria 835
155 Ga0373933_0090038 3300035724 Bacteria 1892
156 Ga0373947_0084963 3300035725 Bacteria 1965
157 Ga0373925_0021985 3300037068 Bacteria 4649
158 Ga0373925_0288532 3300037068 Bacteria 1323
159 Ga0395900_0037295 3300037418 Bacteria 5013
160 Ga0395901_0038496 3300038443 Bacteria 4947
161 Ga0436365_0380770 3300039437 Bacteria 4123
162 Ga0451577_0509919 3300042876 Bacteria 1092
163 Ga0466957_0100044 3300044842 Bacteria 1827
164 Ga0466959_0147063 3300045049 Bacteria 1662
165 Ga0451576_0910973 3300045051 Bacteria 922
166 Ga0451576_1027054 3300045051 Bacteria 864
167 Ga0466958_0008642 3300045836 Bacteria 5655
168 Ga0495592_0053712 3300046454 Bacteria 2987
169 Ga0495653_0211638 3300046463 Bacteria 1309
170 Ga0495608_0005992 3300046511 Bacteria 8642
171 Ga0495652_0041403 3300046529 Bacteria 3977
172 Ga0495621_0129243 3300046539 Bacteria 982
173 Ga0495667_0010984 3300046559 Bacteria 6120
174 Ga0495599_0001388 3300046678 Bacteria 13841
175 Ga0495658_0239684 3300046683 Bacteria 1139
176 Ga0495602_0215805 3300048088 Bacteria 1452
177 Ga0496104_0021694 3300048907 Bacteria 5898
178 Ga0496110_0186990 3300048913 Bacteria 1881
179 Ga0496111_0074715 3300048914 Bacteria 2469
180 Ga0501047_0001153 3300049581 Bacteria 26233
181 Ga0501047_0219600 3300049581 Bacteria 1757
182 Ga0501069_0005261 3300049585 Bacteria 6721
183 Ga0501070_0003751 3300049586 Bacteria 13121
184 Ga0501074_0001266 3300049590 Bacteria 16695
185 Ga0501079_0202770 3300049741 Bacteria 1549
186 Ga0501080_0002979 3300049742 Bacteria 14907
187 Ga0501080_0160881 3300049742 Bacteria 2073
188 Ga0501083_0015144 3300049744 Bacteria 5399
189 nmdc:mga00v17_205380_c1 3300050491 Bacteria 1274
190 nmdc:mga08y16_390_c1 3300050511 Bacteria 40107
191 nmdc:mga0n895_250272_c1 3300050512 Bacteria 1798
192 nmdc:mga0n895_304390_c1 3300050512 Bacteria 1616
193 nmdc:mga0rr50_169280_c1 3300050513 Bacteria 1779
194 nmdc:mga08x19_18151_c1 3300050514 Bacteria 4310
195 Ga0495601_0024802 3300053077 Bacteria 3693
196 Ga0495595_0235015 3300053084 Bacteria 916
197 Ga0495619_0133607 3300053085 Bacteria 1706
198 Ga0501084_0088248 3300054114 Bacteria 2604
199 Ga0501082_0039874 3300060353 Bacteria 4052
200 Ga0070673_100182585
201 Ga0070658_10002135
202 Ga0070658_10048213
203 Ga0070658_10102244
204 Ga0070683_100129472
205 Ga0070690_100067600
206 Ga0070680_100393023
207 Ga0070660_100197995
208 Ga0070689_100154953
209 Ga0070687_100106126
210 Ga0070669_100212211
211 Ga0070675_100571666
212 Ga0070674_100042034
213 Ga0070673_100557899
214 Ga0070688_100057678
215 Ga0070659_100035621
216 Ga0070714_100580037
217 Ga0070678_100831495
218 Ga0070681_10039611
219 Ga0070681_10157148
220 Ga0070681_10404159
221 Ga0068867_100032509
222 Ga0068867_100091061
223 Ga0070685_10019821
224 Ga0070698_100254994
225 Ga0070698_100270801
226 Ga0070699_100058688
227 Ga0070679_100152666
228 Ga0070684_100066645
229 Ga0070684_100433702
230 Ga0070672_100015276
231 Ga0070693_100005743
232 Ga0070704_100029583
233 Ga0068855_100005520
234 Ga0068855_100007589
235 Ga0068855_100056280
236 Ga0068855_100150164
237 Ga0068857_100091310
238 Ga0068854_100528681
239 Ga0068856_100089060
240 Ga0068856_100326528
241 Ga0068852_100005046
242 Ga0068852_100011457
243 Ga0068859_100088910
244 Ga0068851_10001274
245 Ga0068863_100076568
246 Ga0068858_100773852
247 Ga0068862_100076811
248 Ga0068862_100505329
249 Ga0075364_10241534
250 Ga0075366_10007734
251 Ga0097621_100008700
252 Ga0097621_100075962
253 Ga0097621_100127185
254 Ga0068871_100019888
255 Ga0068871_100055559
256 Ga0068871_100124740
257 Ga0075428_100079307
258 Ga0075434_100315107
259 Ga0075436_100000987
260 Ga0097620_100088912
261 Ga0075435_100137494
262 Ga0075435_100164444
263 Ga0075435_100328680
264 Ga0105240_10002905
265 Ga0105240_10075359
266 Ga0111539_10001609
267 Ga0105245_10095835
268 Ga0105245_10154660
269 Ga0114129_10236391
270 Ga0105241_10057696
271 Ga0105241_10241238
272 Ga0105242_10001746
273 Ga0105242_10262658
274 Ga0105248_10177836
275 Ga0105248_10808500
276 Ga0105238_10016679
277 Ga0105249_10944158
278 Ga0157370_10075694
279 Ga0157370_10256478
280 Ga0157369_10513644
281 Ga0157374_10107657
282 Ga0157378_10036316
283 Ga0157372_10011481
284 Ga0157372_10226861
285 Ga0157372_10401876
286 Ga0157375_10278987
287 Ga0157380_10294886
288 Ga0157376_10213166
289 Ga0207656_10000660
290 Ga0207688_10093578
291 Ga0207688_10102045
292 Ga0207643_10259825
293 Ga0207705_10004289
294 Ga0207705_10019000
295 Ga0207705_10047103
296 Ga0207705_10052928
297 Ga0207705_10222832
298 Ga0207654_10013228
299 Ga0207707_10021942
300 Ga0207707_10242041
301 Ga0207695_10002497
302 Ga0207662_10107936
303 Ga0207662_10208767
304 Ga0207646_10531718
305 Ga0207694_10051941
306 Ga0207694_10259963
307 Ga0207659_10009165
308 Ga0207659_10265683
309 Ga0207664_10112502
310 Ga0207690_10036900
311 Ga0207686_10012920
312 Ga0207686_10091339
313 Ga0207686_10128403
314 Ga0207709_10115489
315 Ga0207709_10289744
316 Ga0207669_10038579
317 Ga0207669_10553682
318 Ga0207704_10162292
319 Ga0207691_10010003
320 Ga0207711_10115555
321 Ga0207711_10163286
322 Ga0207661_10272407
323 Ga0207667_10007133
324 Ga0207667_10013536
325 Ga0207667_10035593
326 Ga0207667_10059192
327 Ga0207667_10173331
328 Ga0207651_10063856
329 Ga0207712_10427634
330 Ga0207640_10621202
331 Ga0207677_10095041
332 Ga0207677_10303837
333 Ga0207641_10395040
334 Ga0207641_10435376
335 Ga0207648_10269098
336 Ga0207674_10097603
337 Ga0207675_100250589
338 Ga0207683_10680610
339 Ga0207698_10008585
340 Ga0207698_10433123
341 Ga0207698_10463089
342 Ga0207428_10019042
343 Ga0268265_10068153
344 Ga0265340_10126705
345 Ga0307408_100030045
346 Ga0307408_100431066
347 Ga0307405_10049134
348 Ga0307416_100119716
349 Ga0307416_100292345
350 Ga0307416_100361290
351 Ga0307415_100187631
352 Ga0373955_0016431
353 Ga0373942_0115245
354 Ga0373933_0090038
355 Ga0373947_0084963
356 Ga0373925_0021985
357 Ga0373925_0288532
358 Ga0395900_0037295
359 Ga0395901_0038496
360 Ga0436365_0380770
361 Ga0451577_0509919
362 Ga0466957_0100044
363 Ga0466959_0147063
364 Ga0451576_0910973
365 Ga0451576_1027054
366 Ga0466958_0008642
367 Ga0495592_0053712
368 Ga0495653_0211638
369 Ga0495608_0005992
370 Ga0495652_0041403
371 Ga0495621_0129243
372 Ga0495667_0010984
373 Ga0495599_0001388
374 Ga0495658_0239684
375 Ga0495602_0215805
376 Ga0496104_0021694
377 Ga0496110_0186990
378 Ga0496111_0074715
379 Ga0501047_0001153
380 Ga0501047_0219600
381 Ga0501069_0005261
382 Ga0501070_0003751
383 Ga0501074_0001266
384 Ga0501079_0202770
385 Ga0501080_0002979
386 Ga0501080_0160881
387 Ga0501083_0015144
388 nmdc:mga00v17_205380_c1
389 nmdc:mga08y16_390_c1
390 nmdc:mga0n895_250272_c1
391 nmdc:mga0n895_304390_c1
392 nmdc:mga0rr50_169280_c1
393 nmdc:mga08x19_18151_c1
394 Ga0495601_0024802
395 Ga0495595_0235015
396 Ga0495619_0133607
397 Ga0501084_0088248
398 Ga0501082_0039874

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00590

TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

25

208

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hh1-assembly3.cif.gz_D the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.7875 1 120
3hh1-assembly1.cif.gz_B the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.786 3 122
3hh1-assembly3.cif.gz_D the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.7752 1 120
3hh1-assembly1.cif.gz_B the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.7743 3 122
3fq6-assembly1.cif.gz_A the crystal structure of a methyltransferase domain from bacteroides thetaiotaomicron vpi 0.7116 123 236
ID Description Score Start End Superfamily
1wyzA02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.8985 133 236 3.30.950.10
1wyzC01 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.8938 5 123 3.40.1010.10
1wyzC01 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.8705 5 123 3.40.1010.10
1wyzA02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.8272 133 236 3.30.950.10
5hw4C01 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.8242 4 120 3.40.1010.10
ID Description Score Start End GO Terms
AF-A0A351Q2B4-F1-model_v4 deleted 0.9859 139 235
AF-A0A2E3BXI5-F1-model_v4 Tetrapyrrole methylase domain-containing protein 0.9855 139 236 GO:0008168
AF-A0A536TD46-F1-model_v4 SAM-dependent methyltransferase 0.9836 139 234 GO:0008168
AF-A0A7C6MT16-F1-model_v4 deleted 0.9832 153 236
AF-A0A317GWL5-F1-model_v4 SAM-dependent methyltransferase 0.9796 2 87 GO:0008168
GO:0032259

Map