F305423

General Info

Members Datasets Scaffolds Average Seq Length
199 127 398 298

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100093385|Ga0070671_1000933852
Length 330
Sequence VKGSRVVKTYEAAAALCRVAPTSVTSRVSFPLGAAAAALQHEPRQIAERNLRRVLGDGVHGRELRRMSREVFVSYARYYVDSFRLPSRSAEEIAAGFTIDGYHHIEAALAERNAGPERILALPHLGGWEWAAFWLTRIKGQRVSAVVEELRPPELFEWFCDLRRELGMNVIPLGPGAGSAVVKAINRGDITCLLSDRYLSGGGVAVEFFGERTMLPAGPATLALRTGAALLPCAVYFRGSRCHGVVRPPIPAERHGGGLRDDVARVTQLLARELEALIAAAPEQWHLLQPNWPSDYAALGRAVPDWFALDTTGTATNGARGEVATKDAVS

Samples

Sample ID Description Type Environment
1 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
5 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
6 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
9 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
37 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
40 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
41 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
46 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
49 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
54 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
55 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
56 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
57 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
58 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
61 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
62 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
63 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
64 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
65 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
66 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
67 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
77 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
78 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
79 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
104 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
107 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
111 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
112 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
113 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
116 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
117 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
118 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
119 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
120 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
121 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
124 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
125 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
126 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
127 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.05
Nodule 0
Rhizoplane 8.54
Rhizosphere 80.9
Stem 0
Stem Tuber 0
Unclassified 23.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070671_100093385 3300005355 Bacteria 2521
2 Ga0070668_100130313 3300005347 Unclassified 2018
3 Ga0070671_100049597 3300005355 Bacteria 3492
4 Ga0070667_100223945 3300005367 Bacteria 1675
5 Ga0070705_100134070 3300005440 Unclassified 1620
6 Ga0070686_100054810 3300005544 Unclassified 2552
7 Ga0070695_100054117 3300005545 Unclassified 2582
8 Ga0070665_100063544 3300005548 Bacteria 3702
9 Ga0070704_100301142 3300005549 Unclassified 1336
10 Ga0068863_100234614 3300005841 Unclassified 1770
11 Ga0068860_100051428 3300005843 Bacteria 3921
12 Ga0068860_100324622 3300005843 Unclassified 1511
13 Ga0068862_100757548 3300005844 Unclassified 945
14 Ga0081455_10064404 3300005937 Bacteria 3069
15 Ga0081455_10285053 3300005937 Bacteria 1191
16 Ga0081538_10023484 3300005981 Bacteria 4431
17 Ga0075365_10019056 3300006038 Unclassified 4228
18 Ga0075365_10059278 3300006038 Bacteria 2551
19 Ga0075365_10197377 3300006038 Bacteria 1409
20 Ga0075364_10005480 3300006051 Bacteria 7379
21 Ga0075364_10019956 3300006051 Bacteria 4212
22 Ga0075364_10022780 3300006051 Bacteria 3961
23 Ga0075364_10023499 3300006051 Bacteria 3903
24 Ga0075362_10012462 3300006177 Unclassified 3379
25 Ga0075367_10036557 3300006178 Unclassified 2849
26 Ga0075367_10115249 3300006178 Archaea 1652
27 Ga0075428_100040278 3300006844 Bacteria 5141
28 Ga0075430_100001548 3300006846 Bacteria 18796
29 Ga0075429_100001353 3300006880 Bacteria 20029
30 Ga0097620_100173937 3300006931 Unclassified 2235
31 Ga0111539_10006677 3300009094 Bacteria 14860
32 Ga0111539_10412136 3300009094 Bacteria 1574
33 Ga0105245_10003413 3300009098 Bacteria 14227
34 Ga0105245_10011655 3300009098 Bacteria 7651
35 Ga0114129_10003535 3300009147 Bacteria 21988
36 Ga0105243_10283834 3300009148 Unclassified 1493
37 Ga0105241_10072567 3300009174 Bacteria 2676
38 Ga0105248_10287869 3300009177 Unclassified 1850
39 Ga0105249_10158857 3300009553 Unclassified 2183
40 Ga0157378_10415221 3300013297 Bacteria 1329
41 Ga0163162_10622448 3300013306 Unclassified 1204
42 Ga0157375_10229135 3300013308 Bacteria 2017
43 Ga0157379_10075139 3300014968 Bacteria 3025
44 Ga0157379_10590985 3300014968 Unclassified 1036
45 Ga0213876_10005588 3300021384 Bacteria 6901
46 Ga0207703_10157751 3300026035 Unclassified 1985
47 Ga0207641_10321092 3300026088 Unclassified 1468
48 Ga0207428_10025556 3300027907 Bacteria 4943
49 Ga0268266_10413851 3300028379 Bacteria 1277
50 Ga0268264_10292560 3300028381 Unclassified 1530
51 Ga0265338_10000266 3300028800 Bacteria 95213
52 Ga0265338_10131719 3300028800 Bacteria 1973
53 Ga0265332_10074774 3300031238 Unclassified 1441
54 Ga0265325_10000487 3300031241 Bacteria 28790
55 Ga0265339_10001697 3300031249 Bacteria 16247
56 Ga0265331_10029512 3300031250 Bacteria 2737
57 Ga0265327_10005283 3300031251 Bacteria 10861
58 Ga0265327_10120865 3300031251 Bacteria 1241
59 Ga0265313_10000511 3300031595 Bacteria 40655
60 Ga0316579_10154785 3300031691 Unclassified 1107
61 Ga0316576_10033586 3300031727 Bacteria 3653
62 Ga0316576_10481689 3300031727 Bacteria 914
63 Ga0316578_10016728 3300031728 Bacteria 3976
64 Ga0316577_10116082 3300031733 Bacteria 1503
65 Ga0307407_10132742 3300031903 Bacteria 1596
66 Ga0307409_100149196 3300031995 Bacteria 2027
67 Ga0307415_100021759 3300032126 Bacteria 3949
68 Ga0373946_0018873 3300035171 Unclassified 2652
69 Ga0373955_0076981 3300035172 Unclassified 1878
70 Ga0373935_0071517 3300035692 Unclassified 2238
71 Ga0316582_0182535 3300036647 Unclassified 1428
72 Ga0316584_0180367 3300036712 Unclassified 1563
73 Ga0436364_0572392 3300037853 Bacteria 4415
74 Ga0436365_1238599 3300039437 Bacteria 7710
75 Ga0439434_0009906 3300042435 Bacteria 2805
76 Ga0495639_0131533 3300046475 Bacteria 1198
77 Ga0495618_0064523 3300046514 Bacteria 2327
78 Ga0495640_0128897 3300046533 Unclassified 1639
79 Ga0495634_0007394 3300046642 Bacteria 8265
80 Ga0495658_0251253 3300046683 Bacteria 1112
81 Ga0495613_0168219 3300046689 Unclassified 1557
82 Ga0495676_0096008 3300047321 Bacteria 2205
83 Ga0495676_0185846 3300047321 Bacteria 1453
84 Ga0496102_0029657 3300048905 Bacteria 4896
85 Ga0496104_0197187 3300048907 Bacteria 1925
86 Ga0496104_0219795 3300048907 Unclassified 1812
87 Ga0496105_0173145 3300048908 Unclassified 1769
88 Ga0496105_0361532 3300048908 Bacteria 1158
89 Ga0496108_0032875 3300048911 Bacteria 4309
90 Ga0496108_0274734 3300048911 Unclassified 1467
91 Ga0496108_0372546 3300048911 Bacteria 1247
92 Ga0496109_0018113 3300048912 Bacteria 6184
93 Ga0496110_0014837 3300048913 Bacteria 6475
94 Ga0496110_0207206 3300048913 Bacteria 1782
95 Ga0496111_0049443 3300048914 Bacteria 3032
96 Ga0496112_0090480 3300048915 Unclassified 3029
97 Ga0496112_0277496 3300048915 Bacteria 1624
98 Ga0496113_0588006 3300048916 Bacteria 892
99 Ga0496114_0015000 3300048917 Bacteria 6230
100 Ga0496115_0214719 3300048918 Bacteria 1589
101 Ga0501031_0093000 3300049568 Bacteria 1968
102 Ga0501031_0224365 3300049568 Bacteria 1223
103 Ga0501032_0000746 3300049569 Bacteria 26453
104 Ga0501032_0174369 3300049569 Bacteria 1409
105 Ga0501033_0060329 3300049570 Bacteria 2799
106 Ga0501034_0000034 3300049571 Bacteria 242608
107 Ga0501034_0022791 3300049571 Bacteria 6380
108 Ga0501034_0027015 3300049571 Bacteria 5839
109 Ga0501034_0112707 3300049571 Bacteria 2709
110 Ga0501036_0226602 3300049572 Unclassified 1569
111 Ga0501036_0580224 3300049572 Unclassified 931
112 Ga0501037_0008677 3300049573 Bacteria 7452
113 Ga0501038_0016505 3300049574 Bacteria 6693
114 Ga0501038_0187886 3300049574 Unclassified 1664
115 Ga0501039_0003198 3300049575 Bacteria 12247
116 Ga0501039_0090050 3300049575 Bacteria 2391
117 Ga0501040_0005157 3300049576 Bacteria 8453
118 Ga0501040_0024676 3300049576 Bacteria 4036
119 Ga0501041_0067138 3300049577 Bacteria 2198
120 Ga0501041_0077411 3300049577 Unclassified 2046
121 Ga0501042_0066583 3300049578 Bacteria 2575
122 Ga0501042_0121427 3300049578 Bacteria 1881
123 Ga0501042_0127316 3300049578 Bacteria 1834
124 Ga0501042_0209097 3300049578 Unclassified 1407
125 Ga0501043_0025816 3300049579 Bacteria 4609
126 Ga0501043_0229257 3300049579 Unclassified 1435
127 Ga0501046_0119004 3300049580 Bacteria 2011
128 Ga0501047_0218561 3300049581 Bacteria 1762
129 Ga0501048_0010452 3300049582 Bacteria 6930
130 Ga0501048_0106242 3300049582 Unclassified 1981
131 Ga0501068_0000284 3300049584 Bacteria 25204
132 Ga0501068_0049171 3300049584 Bacteria 2546
133 Ga0501068_0315561 3300049584 Bacteria 1002
134 Ga0501069_0000089 3300049585 Bacteria 43912
135 Ga0501070_0000008 3300049586 Bacteria 199963
136 Ga0501070_0004588 3300049586 Bacteria 11840
137 Ga0501070_0451192 3300049586 Bacteria 1037
138 Ga0501071_0002723 3300049587 Bacteria 10835
139 Ga0501071_0155281 3300049587 Bacteria 1708
140 Ga0501071_0349657 3300049587 Bacteria 1125
141 Ga0501072_0002573 3300049588 Bacteria 13592
142 Ga0501072_0005837 3300049588 Bacteria 9380
143 Ga0501072_0010090 3300049588 Bacteria 7189
144 Ga0501072_0013900 3300049588 Bacteria 6169
145 Ga0501072_0204552 3300049588 Bacteria 1574
146 Ga0501073_0001227 3300049589 Bacteria 18698
147 Ga0501074_0000411 3300049590 Bacteria 25606
148 Ga0501074_0040250 3300049590 Bacteria 3386
149 Ga0501074_0185831 3300049590 Unclassified 1482
150 Ga0501075_0003227 3300049591 Bacteria 10910
151 Ga0501076_0012289 3300049592 Bacteria 6403
152 Ga0501076_0023580 3300049592 Bacteria 4746
153 Ga0501076_0094369 3300049592 Unclassified 2409
154 Ga0501077_0001633 3300049593 Bacteria 13464
155 Ga0501079_0012933 3300049741 Bacteria 6368
156 Ga0501079_0266281 3300049741 Bacteria 1340
157 Ga0501080_0000689 3300049742 Bacteria 27058
158 Ga0501080_0012172 3300049742 Bacteria 7882
159 Ga0501080_0020487 3300049742 Bacteria 6122
160 Ga0501080_0133263 3300049742 Bacteria 2300
161 Ga0501080_0204666 3300049742 Bacteria 1811
162 Ga0501081_0072991 3300049743 Bacteria 2393
163 Ga0501081_0084823 3300049743 Unclassified 2222
164 Ga0501081_0105258 3300049743 Bacteria 1998
165 Ga0501035_0030959 3300049822 Bacteria 4874
166 Ga0501044_0002219 3300049823 Bacteria 22267
167 Ga0501044_0054821 3300049823 Bacteria 4096
168 Ga0501045_0003525 3300049824 Bacteria 10723
169 Ga0501045_0004551 3300049824 Bacteria 9580
170 Ga0501045_0025187 3300049824 Bacteria 4275
171 Ga0501045_0108879 3300049824 Unclassified 2054
172 Ga0501045_0167768 3300049824 Bacteria 1635
173 nmdc:mga03n38_154037_c1 3300050490 Bacteria 1159
174 nmdc:mga00v17_11374_c1 3300050491 Bacteria 4892
175 nmdc:mga00v17_52352_c1 3300050491 Bacteria 2484
176 nmdc:mga00v17_64988_c1 3300050491 Bacteria 2249
177 nmdc:mga0yw44_105227_c1 3300050492 Bacteria 1802
178 nmdc:mga06z11_57307_c1 3300050494 Bacteria 2018
179 nmdc:mga05p37_193_c1 3300050507 Bacteria 60583
180 nmdc:mga09592_713_c1 3300050508 Bacteria 25509
181 nmdc:mga0qj67_789_c1 3300050509 Bacteria 21551
182 nmdc:mga06r32_2913_c1 3300050510 Bacteria 15350
183 nmdc:mga08y16_4152_c1 3300050511 Bacteria 15123
184 nmdc:mga0n895_442897_c1 3300050512 Bacteria 1312
185 nmdc:mga0rr50_431347_c1 3300050513 Unclassified 1116
186 Ga0495595_0038064 3300053084 Bacteria 2190
187 Ga0495619_0231651 3300053085 Bacteria 1280
188 Ga0495619_0242045 3300053085 Unclassified 1250
189 Ga0500568_0002598 3300053139 Bacteria 10495
190 Ga0500616_0000689 3300053153 Bacteria 39630
191 Ga0501084_0026019 3300054114 Bacteria 4880
192 Ga0501084_0032093 3300054114 Bacteria 4393
193 Ga0501084_0087782 3300054114 Bacteria 2611
194 Ga0501082_0005083 3300060353 Bacteria 11460
195 Ga0501082_0086989 3300060353 Bacteria 2696
196 Ga0501082_0202067 3300060353 Bacteria 1729
197 Ga0501082_0236212 3300060353 Bacteria 1591
198 Ga0530510_0023830 3300061734 Bacteria 4364
199 Ga0530510_0115389 3300061734 Bacteria 1969
200 Ga0070671_100093385
201 Ga0070668_100130313
202 Ga0070671_100049597
203 Ga0070667_100223945
204 Ga0070705_100134070
205 Ga0070686_100054810
206 Ga0070695_100054117
207 Ga0070665_100063544
208 Ga0070704_100301142
209 Ga0068863_100234614
210 Ga0068860_100051428
211 Ga0068860_100324622
212 Ga0068862_100757548
213 Ga0081455_10064404
214 Ga0081455_10285053
215 Ga0081538_10023484
216 Ga0075365_10019056
217 Ga0075365_10059278
218 Ga0075365_10197377
219 Ga0075364_10005480
220 Ga0075364_10019956
221 Ga0075364_10022780
222 Ga0075364_10023499
223 Ga0075362_10012462
224 Ga0075367_10036557
225 Ga0075367_10115249
226 Ga0075428_100040278
227 Ga0075430_100001548
228 Ga0075429_100001353
229 Ga0097620_100173937
230 Ga0111539_10006677
231 Ga0111539_10412136
232 Ga0105245_10003413
233 Ga0105245_10011655
234 Ga0114129_10003535
235 Ga0105243_10283834
236 Ga0105241_10072567
237 Ga0105248_10287869
238 Ga0105249_10158857
239 Ga0157378_10415221
240 Ga0163162_10622448
241 Ga0157375_10229135
242 Ga0157379_10075139
243 Ga0157379_10590985
244 Ga0213876_10005588
245 Ga0207703_10157751
246 Ga0207641_10321092
247 Ga0207428_10025556
248 Ga0268266_10413851
249 Ga0268264_10292560
250 Ga0265338_10000266
251 Ga0265338_10131719
252 Ga0265332_10074774
253 Ga0265325_10000487
254 Ga0265339_10001697
255 Ga0265331_10029512
256 Ga0265327_10005283
257 Ga0265327_10120865
258 Ga0265313_10000511
259 Ga0316579_10154785
260 Ga0316576_10033586
261 Ga0316576_10481689
262 Ga0316578_10016728
263 Ga0316577_10116082
264 Ga0307407_10132742
265 Ga0307409_100149196
266 Ga0307415_100021759
267 Ga0373946_0018873
268 Ga0373955_0076981
269 Ga0373935_0071517
270 Ga0316582_0182535
271 Ga0316584_0180367
272 Ga0436364_0572392
273 Ga0436365_1238599
274 Ga0439434_0009906
275 Ga0495639_0131533
276 Ga0495618_0064523
277 Ga0495640_0128897
278 Ga0495634_0007394
279 Ga0495658_0251253
280 Ga0495613_0168219
281 Ga0495676_0096008
282 Ga0495676_0185846
283 Ga0496102_0029657
284 Ga0496104_0197187
285 Ga0496104_0219795
286 Ga0496105_0173145
287 Ga0496105_0361532
288 Ga0496108_0032875
289 Ga0496108_0274734
290 Ga0496108_0372546
291 Ga0496109_0018113
292 Ga0496110_0014837
293 Ga0496110_0207206
294 Ga0496111_0049443
295 Ga0496112_0090480
296 Ga0496112_0277496
297 Ga0496113_0588006
298 Ga0496114_0015000
299 Ga0496115_0214719
300 Ga0501031_0093000
301 Ga0501031_0224365
302 Ga0501032_0000746
303 Ga0501032_0174369
304 Ga0501033_0060329
305 Ga0501034_0000034
306 Ga0501034_0022791
307 Ga0501034_0027015
308 Ga0501034_0112707
309 Ga0501036_0226602
310 Ga0501036_0580224
311 Ga0501037_0008677
312 Ga0501038_0016505
313 Ga0501038_0187886
314 Ga0501039_0003198
315 Ga0501039_0090050
316 Ga0501040_0005157
317 Ga0501040_0024676
318 Ga0501041_0067138
319 Ga0501041_0077411
320 Ga0501042_0066583
321 Ga0501042_0121427
322 Ga0501042_0127316
323 Ga0501042_0209097
324 Ga0501043_0025816
325 Ga0501043_0229257
326 Ga0501046_0119004
327 Ga0501047_0218561
328 Ga0501048_0010452
329 Ga0501048_0106242
330 Ga0501068_0000284
331 Ga0501068_0049171
332 Ga0501068_0315561
333 Ga0501069_0000089
334 Ga0501070_0000008
335 Ga0501070_0004588
336 Ga0501070_0451192
337 Ga0501071_0002723
338 Ga0501071_0155281
339 Ga0501071_0349657
340 Ga0501072_0002573
341 Ga0501072_0005837
342 Ga0501072_0010090
343 Ga0501072_0013900
344 Ga0501072_0204552
345 Ga0501073_0001227
346 Ga0501074_0000411
347 Ga0501074_0040250
348 Ga0501074_0185831
349 Ga0501075_0003227
350 Ga0501076_0012289
351 Ga0501076_0023580
352 Ga0501076_0094369
353 Ga0501077_0001633
354 Ga0501079_0012933
355 Ga0501079_0266281
356 Ga0501080_0000689
357 Ga0501080_0012172
358 Ga0501080_0020487
359 Ga0501080_0133263
360 Ga0501080_0204666
361 Ga0501081_0072991
362 Ga0501081_0084823
363 Ga0501081_0105258
364 Ga0501035_0030959
365 Ga0501044_0002219
366 Ga0501044_0054821
367 Ga0501045_0003525
368 Ga0501045_0004551
369 Ga0501045_0025187
370 Ga0501045_0108879
371 Ga0501045_0167768
372 nmdc:mga03n38_154037_c1
373 nmdc:mga00v17_11374_c1
374 nmdc:mga00v17_52352_c1
375 nmdc:mga00v17_64988_c1
376 nmdc:mga0yw44_105227_c1
377 nmdc:mga06z11_57307_c1
378 nmdc:mga05p37_193_c1
379 nmdc:mga09592_713_c1
380 nmdc:mga0qj67_789_c1
381 nmdc:mga06r32_2913_c1
382 nmdc:mga08y16_4152_c1
383 nmdc:mga0n895_442897_c1
384 nmdc:mga0rr50_431347_c1
385 Ga0495595_0038064
386 Ga0495619_0231651
387 Ga0495619_0242045
388 Ga0500568_0002598
389 Ga0500616_0000689
390 Ga0501084_0026019
391 Ga0501084_0032093
392 Ga0501084_0087782
393 Ga0501082_0005083
394 Ga0501082_0086989
395 Ga0501082_0202067
396 Ga0501082_0236212
397 Ga0530510_0023830
398 Ga0530510_0115389

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03279

Lip_A_acyltrans

Bacterial lipid A biosynthesis acyltransferase

6

294

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.9201 55 306
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.8958 55 306
5kn7-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii 0.7929 19 306
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.7799 2 306
5kn7-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii 0.7307 19 306
ID Description Score Start End Superfamily
af_Q60848_509_798_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.68 112 199 3.40.50.300
af_Q2FXJ7_19_144_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6728 106 237 3.40.50.2000
af_P31119_15_138_3.40.1010.10 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.6504 117 237 3.40.1010.10
5l3rC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6473 123 199 3.40.50.300
af_Q2FXJ7_19_144_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6461 106 237 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A539DZ55-F1-model_v4 Putative acyltransferase 0.9949 74 307 GO:0005886
GO:0009247
GO:0016746
AF-A0A6J6JZZ1-F1-model_v4 Unannotated protein 0.988 5 306 GO:0005886
GO:0008610
GO:0016746
GO:1901137
AF-A0A539DZ55-F1-model_v4 Putative acyltransferase 0.9865 74 307 GO:0005886
GO:0009247
GO:0016746
AF-A0A6J6D1K8-F1-model_v4 Unannotated protein 0.9837 57 302 GO:0005886
GO:0008610
GO:0016746
GO:1901137
AF-A0A6J7NK44-F1-model_v4 Unannotated protein 0.9781 6 307 GO:0005886
GO:0008610
GO:0016746
GO:1901137

Map