F305393

General Info

Members Datasets Scaffolds Average Seq Length
199 148 398 209

Family's Representative Sequence

Representative Sequence 3300005338|Ga0068868_100568509|Ga0068868_1005685092
Length 239
Sequence MPPASSHPGRSARGASATVPPVSDANDRVPAFRAVIFDLGGVVFPSPFEVFDAYERERDLPPRFIRTVVAASAEDGAWARFERSELSFADFCTALEAECAAAGGTIDAAALMQGIGAGFAPRPEMMRAIGRLRAVGLRVGALTNNWARPDAGTLREPMDLGFDTVVESAVEGIRKPDPRIYTLVCERLAVTPAECVFLDDLGVNLKPARAMGMTTIKVVDPLDALAELGGHLDLDLVAA

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
58 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
61 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
85 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
86 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
89 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
90 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
91 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
92 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
93 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
94 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
95 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
145 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
146 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
147 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
148 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.98
Metatranscriptomes 1.01
Isolates 2.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.5
Nodule 2.01
Rhizoplane 7.54
Rhizosphere 88.44
Stem 0
Stem Tuber 0
Unclassified 6.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100568509 3300005338 Bacteria 1001
2 Ga0070658_10171951 3300005327 Bacteria 1820
3 Ga0070683_100073819 3300005329 Bacteria 3185
4 Ga0070680_100003653 3300005336 Bacteria 11494
5 Ga0070682_100342779 3300005337 Bacteria 1111
6 Ga0068868_100221881 3300005338 Bacteria 1583
7 Ga0070660_100036076 3300005339 Bacteria 3744
8 Ga0070692_10207029 3300005345 Bacteria 1152
9 Ga0070688_100908872 3300005365 Bacteria 695
10 Ga0070714_100419293 3300005435 Bacteria 1268
11 Ga0070705_100635539 3300005440 Bacteria 830
12 Ga0070708_100003128 3300005445 Bacteria 12886
13 Ga0070681_10001203 3300005458 Bacteria 22489
14 Ga0070698_100516298 3300005471 Bacteria 1133
15 Ga0070679_100027084 3300005530 Bacteria 5637
16 Ga0070684_100021255 3300005535 Bacteria 5396
17 Ga0070696_100718183 3300005546 Bacteria 816
18 Ga0070704_100264762 3300005549 Bacteria 1418
19 Ga0068856_100279626 3300005614 Bacteria 1686
20 Ga0070702_100287798 3300005615 Bacteria 1131
21 Ga0068864_100162130 3300005618 Bacteria 2033
22 Ga0068863_100409535 3300005841 Bacteria 1327
23 Ga0081455_10047547 3300005937 Bacteria 3715
24 Ga0081455_10362425 3300005937 Bacteria 1019
25 Ga0075428_100001034 3300006844 Bacteria 29480
26 Ga0075428_100361029 3300006844 Bacteria 1558
27 Ga0075433_10008623 3300006852 Bacteria 8133
28 Ga0075434_100363268 3300006871 Bacteria 1469
29 Ga0075436_100094975 3300006914 Bacteria 2074
30 Ga0075436_100128625 3300006914 Bacteria 1775
31 Ga0075435_100044251 3300007076 Bacteria 3565
32 Ga0075435_100124821 3300007076 Bacteria 2151
33 Ga0075435_100373835 3300007076 Bacteria 1224
34 Ga0075435_100621679 3300007076 Bacteria 937
35 Ga0111539_10046480 3300009094 Bacteria 5192
36 Ga0111539_10296340 3300009094 Bacteria 1882
37 Ga0105245_10366071 3300009098 Bacteria 1432
38 Ga0105245_10986447 3300009098 Bacteria 886
39 Ga0114129_10316709 3300009147 Bacteria 2075
40 Ga0105243_10334977 3300009148 Bacteria 1384
41 Ga0105243_11100527 3300009148 Bacteria 803
42 Ga0105242_10171094 3300009176 Bacteria 1909
43 Ga0105237_10266347 3300009545 Bacteria 1716
44 Ga0105246_10190375 3300011119 Bacteria 1587
45 Ga0157370_10072701 3300013104 Bacteria 3244
46 Ga0157370_10976552 3300013104 Unclassified 767
47 Ga0157369_10002321 3300013105 Bacteria 22897
48 Ga0157369_10391689 3300013105 Bacteria 1441
49 Ga0157374_10501224 3300013296 Bacteria 1219
50 Ga0157378_10051758 3300013297 Bacteria 3653
51 Ga0157375_10214195 3300013308 Bacteria 2084
52 Ga0163163_10226241 3300014325 Bacteria 1920
53 Ga0163163_10772301 3300014325 Bacteria 1024
54 Ga0157380_10422091 3300014326 Bacteria 1272
55 Ga0157380_10765479 3300014326 Bacteria 979
56 Ga0206354_10636873 3300020081 Bacteria 2970
57 Ga0224712_10188720 3300022467 Bacteria 932
58 Ga0207705_10147680 3300025909 Bacteria 1760
59 Ga0207684_10565299 3300025910 Unclassified 972
60 Ga0207707_10001448 3300025912 Bacteria 21943
61 Ga0207660_10922023 3300025917 Bacteria 713
62 Ga0207652_10029587 3300025921 Bacteria 4582
63 Ga0207652_10347577 3300025921 Unclassified 1339
64 Ga0207686_10100405 3300025934 Bacteria 1931
65 Ga0207709_10338824 3300025935 Bacteria 1131
66 Ga0207661_10011755 3300025944 Bacteria 6355
67 Ga0207678_10343921 3300026067 Bacteria 1286
68 Ga0207708_10403434 3300026075 Bacteria 1131
69 Ga0207641_10385074 3300026088 Bacteria 1344
70 Ga0207648_10203499 3300026089 Bacteria 1756
71 Ga0207676_10672695 3300026095 Bacteria 1001
72 Ga0207428_10194825 3300027907 Bacteria 1526
73 Ga0268266_10479775 3300028379 Bacteria 1185
74 Ga0268264_10439532 3300028381 Bacteria 1262
75 Ga0265337_1003604 3300028556 Bacteria 6658
76 Ga0265334_10007477 3300028573 Bacteria 4686
77 Ga0265338_10000134 3300028800 Bacteria 135896
78 Ga0265330_10166721 3300031235 Bacteria 934
79 Ga0265332_10035819 3300031238 Bacteria 2155
80 Ga0265328_10092644 3300031239 Unclassified 1117
81 Ga0265320_10000435 3300031240 Bacteria 32888
82 Ga0265320_10227091 3300031240 Bacteria 831
83 Ga0265325_10001259 3300031241 Bacteria 18070
84 Ga0265325_10026354 3300031241 Bacteria 3149
85 Ga0265339_10010581 3300031249 Bacteria 5725
86 Ga0265327_10141064 3300031251 Bacteria 1126
87 Ga0265316_10098520 3300031344 Bacteria 2224
88 Ga0265316_10115418 3300031344 Bacteria 2030
89 Ga0265313_10005544 3300031595 Bacteria 9250
90 Ga0265314_10037170 3300031711 Bacteria 3531
91 Ga0307409_100284669 3300031995 Bacteria 1530
92 Ga0307416_100227221 3300032002 Bacteria 1796
93 Ga0307416_100353813 3300032002 Bacteria 1488
94 Ga0307415_100062212 3300032126 Bacteria 2588
95 Ga0307415_100309010 3300032126 Bacteria 1313
96 Ga0373943_0222752 3300035170 Bacteria 1051
97 Ga0373937_0151131 3300036401 Bacteria 2175
98 Ga0373937_0198801 3300036401 Unclassified 1884
99 Ga0395898_0227503 3300037466 Bacteria 1779
100 Ga0436365_0009423 3300039437 Bacteria 2585
101 Ga0436365_1296220 3300039437 Bacteria 1874
102 Ga0436363_1560614 3300039450 Unclassified 942
103 Ga0451577_0878010 3300042876 Unclassified 808
104 Ga0466963_0103463 3300044694 Bacteria 1951
105 Ga0495580_0252329 3300046472 Bacteria 1208
106 Ga0495639_0052739 3300046475 Bacteria 1852
107 Ga0495662_0130220 3300046476 Bacteria 1237
108 Ga0495618_0225281 3300046514 Bacteria 1182
109 Ga0495630_0562872 3300046517 Bacteria 874
110 Ga0495666_0213150 3300046526 Bacteria 886
111 Ga0495665_0038536 3300046531 Bacteria 2548
112 Ga0495635_0243174 3300046663 Bacteria 1214
113 Ga0495588_0240161 3300046674 Bacteria 956
114 Ga0495658_0527592 3300046683 Unclassified 756
115 Ga0495658_0530546 3300046683 Bacteria 753
116 Ga0495581_0139934 3300047315 Bacteria 1412
117 Ga0495604_0274172 3300047317 Bacteria 1142
118 Ga0495636_0025211 3300047318 Bacteria 2413
119 Ga0495684_0431150 3300047471 Bacteria 920
120 Ga0495614_0232429 3300048089 Bacteria 840
121 Ga0496102_0056669 3300048905 Bacteria 3576
122 Ga0496105_0371324 3300048908 Bacteria 1139
123 Ga0496105_0636881 3300048908 Unclassified 824
124 Ga0496108_0162895 3300048911 Bacteria 1928
125 Ga0496109_0151088 3300048912 Bacteria 2174
126 Ga0496109_0712793 3300048912 Bacteria 941
127 Ga0496109_0879103 3300048912 Bacteria 834
128 Ga0496110_0024410 3300048913 Bacteria 5153
129 Ga0496111_0181556 3300048914 Bacteria 1564
130 Ga0496112_0098831 3300048915 Bacteria 2888
131 Ga0496112_0478269 3300048915 Bacteria 1182
132 Ga0496112_1287115 3300048915 Unclassified 647
133 Ga0496113_0214706 3300048916 Bacteria 1532
134 Ga0496114_0285118 3300048917 Unclassified 1457
135 Ga0496115_0007776 3300048918 Bacteria 7906
136 Ga0501032_0023174 3300049569 Bacteria 4296
137 Ga0501033_0134746 3300049570 Bacteria 1787
138 Ga0501034_0017506 3300049571 Bacteria 7350
139 Ga0501036_0003528 3300049572 Bacteria 12519
140 Ga0501039_0006343 3300049575 Bacteria 8982
141 Ga0501039_0086529 3300049575 Bacteria 2441
142 Ga0501040_0012922 3300049576 Bacteria 5486
143 Ga0501041_0010612 3300049577 Bacteria 5431
144 Ga0501042_0017445 3300049578 Bacteria 4951
145 Ga0501042_0513937 3300049578 Bacteria 870
146 Ga0501042_0572370 3300049578 Bacteria 821
147 Ga0501046_0072614 3300049580 Bacteria 2671
148 Ga0501047_0723780 3300049581 Unclassified 812
149 Ga0501048_0022626 3300049582 Bacteria 4596
150 Ga0501068_0007878 3300049584 Bacteria 5903
151 Ga0501068_0013134 3300049584 Bacteria 4708
152 Ga0501068_0028243 3300049584 Bacteria 3316
153 Ga0501069_0014538 3300049585 Bacteria 4209
154 Ga0501069_0152132 3300049585 Bacteria 1330
155 Ga0501070_0002107 3300049586 Bacteria 17461
156 Ga0501071_0014150 3300049587 Bacteria 5453
157 Ga0501071_0305746 3300049587 Bacteria 1206
158 Ga0501072_0006118 3300049588 Bacteria 9181
159 Ga0501072_0571182 3300049588 Bacteria 892
160 Ga0501073_0002597 3300049589 Bacteria 13517
161 Ga0501073_0699864 3300049589 Bacteria 699
162 Ga0501074_0042453 3300049590 Bacteria 3291
163 Ga0501074_0493792 3300049590 Bacteria 867
164 Ga0501075_0072997 3300049591 Bacteria 2594
165 Ga0501076_0004875 3300049592 Bacteria 9590
166 Ga0501076_0226655 3300049592 Bacteria 1528
167 Ga0501077_0102295 3300049593 Bacteria 1815
168 Ga0501077_0359171 3300049593 Bacteria 930
169 Ga0501079_0006779 3300049741 Bacteria 8617
170 Ga0501079_0011796 3300049741 Bacteria 6673
171 Ga0501081_0021996 3300049743 Bacteria 4262
172 Ga0501081_0285989 3300049743 Bacteria 1208
173 Ga0501083_0002227 3300049744 Bacteria 13252
174 Ga0501035_0072710 3300049822 Bacteria 3043
175 nmdc:mga05p37_23917_c1 3300050507 Bacteria 7418
176 nmdc:mga05p37_24587_c1 3300050507 Bacteria 7323
177 nmdc:mga09592_21981_c1 3300050508 Bacteria 5262
178 nmdc:mga08y16_47318_c1 3300050511 Bacteria 4501
179 nmdc:mga0n895_124517_c1 3300050512 Bacteria 2601
180 nmdc:mga0n895_549154_c1 3300050512 Bacteria 1161
181 nmdc:mga0rr50_48828_c1 3300050513 Bacteria 3131
182 nmdc:mga0rr50_829152_c1 3300050513 Bacteria 789
183 nmdc:mga0rr50_988103_c1 3300050513 Unclassified 717
184 nmdc:mga08x19_189608_c1 3300050514 Bacteria 1406
185 nmdc:mga08x19_26682_c1 3300050514 Bacteria 3605
186 nmdc:mga0a205_20559_c2 3300050515 Bacteria 5883
187 Ga0495619_0292165 3300053085 Bacteria 1129
188 Ga0500616_0006655 3300053153 Bacteria 7516
189 Ga0501084_0000055 3300054114 Bacteria 89873
190 Ga0501084_0000503 3300054114 Bacteria 29987
191 Ga0501084_0004211 3300054114 Bacteria 11728
192 Ga0501082_0050455 3300060353 Bacteria 3588
193 Ga0501082_0180604 3300060353 Bacteria 1835
194 Ga0530510_0006742 3300061734 Bacteria 8005
195 Ga0530510_0011761 3300061734 Bacteria 6141
196 2929622604 2929615660 Bacteria 9193770
197 2929631178 2929624759 Bacteria 9339455
198 2933584317 2933577622 Bacteria 9116884
199 8055751055 8055742211 Bacteria 9226248
200 Ga0068868_100568509
201 Ga0070658_10171951
202 Ga0070683_100073819
203 Ga0070680_100003653
204 Ga0070682_100342779
205 Ga0068868_100221881
206 Ga0070660_100036076
207 Ga0070692_10207029
208 Ga0070688_100908872
209 Ga0070714_100419293
210 Ga0070705_100635539
211 Ga0070708_100003128
212 Ga0070681_10001203
213 Ga0070698_100516298
214 Ga0070679_100027084
215 Ga0070684_100021255
216 Ga0070696_100718183
217 Ga0070704_100264762
218 Ga0068856_100279626
219 Ga0070702_100287798
220 Ga0068864_100162130
221 Ga0068863_100409535
222 Ga0081455_10047547
223 Ga0081455_10362425
224 Ga0075428_100001034
225 Ga0075428_100361029
226 Ga0075433_10008623
227 Ga0075434_100363268
228 Ga0075436_100094975
229 Ga0075436_100128625
230 Ga0075435_100044251
231 Ga0075435_100124821
232 Ga0075435_100373835
233 Ga0075435_100621679
234 Ga0111539_10046480
235 Ga0111539_10296340
236 Ga0105245_10366071
237 Ga0105245_10986447
238 Ga0114129_10316709
239 Ga0105243_10334977
240 Ga0105243_11100527
241 Ga0105242_10171094
242 Ga0105237_10266347
243 Ga0105246_10190375
244 Ga0157370_10072701
245 Ga0157370_10976552
246 Ga0157369_10002321
247 Ga0157369_10391689
248 Ga0157374_10501224
249 Ga0157378_10051758
250 Ga0157375_10214195
251 Ga0163163_10226241
252 Ga0163163_10772301
253 Ga0157380_10422091
254 Ga0157380_10765479
255 Ga0206354_10636873
256 Ga0224712_10188720
257 Ga0207705_10147680
258 Ga0207684_10565299
259 Ga0207707_10001448
260 Ga0207660_10922023
261 Ga0207652_10029587
262 Ga0207652_10347577
263 Ga0207686_10100405
264 Ga0207709_10338824
265 Ga0207661_10011755
266 Ga0207678_10343921
267 Ga0207708_10403434
268 Ga0207641_10385074
269 Ga0207648_10203499
270 Ga0207676_10672695
271 Ga0207428_10194825
272 Ga0268266_10479775
273 Ga0268264_10439532
274 Ga0265337_1003604
275 Ga0265334_10007477
276 Ga0265338_10000134
277 Ga0265330_10166721
278 Ga0265332_10035819
279 Ga0265328_10092644
280 Ga0265320_10000435
281 Ga0265320_10227091
282 Ga0265325_10001259
283 Ga0265325_10026354
284 Ga0265339_10010581
285 Ga0265327_10141064
286 Ga0265316_10098520
287 Ga0265316_10115418
288 Ga0265313_10005544
289 Ga0265314_10037170
290 Ga0307409_100284669
291 Ga0307416_100227221
292 Ga0307416_100353813
293 Ga0307415_100062212
294 Ga0307415_100309010
295 Ga0373943_0222752
296 Ga0373937_0151131
297 Ga0373937_0198801
298 Ga0395898_0227503
299 Ga0436365_0009423
300 Ga0436365_1296220
301 Ga0436363_1560614
302 Ga0451577_0878010
303 Ga0466963_0103463
304 Ga0495580_0252329
305 Ga0495639_0052739
306 Ga0495662_0130220
307 Ga0495618_0225281
308 Ga0495630_0562872
309 Ga0495666_0213150
310 Ga0495665_0038536
311 Ga0495635_0243174
312 Ga0495588_0240161
313 Ga0495658_0527592
314 Ga0495658_0530546
315 Ga0495581_0139934
316 Ga0495604_0274172
317 Ga0495636_0025211
318 Ga0495684_0431150
319 Ga0495614_0232429
320 Ga0496102_0056669
321 Ga0496105_0371324
322 Ga0496105_0636881
323 Ga0496108_0162895
324 Ga0496109_0151088
325 Ga0496109_0712793
326 Ga0496109_0879103
327 Ga0496110_0024410
328 Ga0496111_0181556
329 Ga0496112_0098831
330 Ga0496112_0478269
331 Ga0496112_1287115
332 Ga0496113_0214706
333 Ga0496114_0285118
334 Ga0496115_0007776
335 Ga0501032_0023174
336 Ga0501033_0134746
337 Ga0501034_0017506
338 Ga0501036_0003528
339 Ga0501039_0006343
340 Ga0501039_0086529
341 Ga0501040_0012922
342 Ga0501041_0010612
343 Ga0501042_0017445
344 Ga0501042_0513937
345 Ga0501042_0572370
346 Ga0501046_0072614
347 Ga0501047_0723780
348 Ga0501048_0022626
349 Ga0501068_0007878
350 Ga0501068_0013134
351 Ga0501068_0028243
352 Ga0501069_0014538
353 Ga0501069_0152132
354 Ga0501070_0002107
355 Ga0501071_0014150
356 Ga0501071_0305746
357 Ga0501072_0006118
358 Ga0501072_0571182
359 Ga0501073_0002597
360 Ga0501073_0699864
361 Ga0501074_0042453
362 Ga0501074_0493792
363 Ga0501075_0072997
364 Ga0501076_0004875
365 Ga0501076_0226655
366 Ga0501077_0102295
367 Ga0501077_0359171
368 Ga0501079_0006779
369 Ga0501079_0011796
370 Ga0501081_0021996
371 Ga0501081_0285989
372 Ga0501083_0002227
373 Ga0501035_0072710
374 nmdc:mga05p37_23917_c1
375 nmdc:mga05p37_24587_c1
376 nmdc:mga09592_21981_c1
377 nmdc:mga08y16_47318_c1
378 nmdc:mga0n895_124517_c1
379 nmdc:mga0n895_549154_c1
380 nmdc:mga0rr50_48828_c1
381 nmdc:mga0rr50_829152_c1
382 nmdc:mga0rr50_988103_c1
383 nmdc:mga08x19_189608_c1
384 nmdc:mga08x19_26682_c1
385 nmdc:mga0a205_20559_c2
386 Ga0495619_0292165
387 Ga0500616_0006655
388 Ga0501084_0000055
389 Ga0501084_0000503
390 Ga0501084_0004211
391 Ga0501082_0050455
392 Ga0501082_0180604
393 Ga0530510_0006742
394 Ga0530510_0011761
395 2929622604
396 2929631178
397 2933584317
398 8055751055

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13419

HAD_2

Haloacid dehalogenase-like hydrolase

111

218

0.87

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

32

212

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ek2-assembly1.cif.gz_A crystal structure of murine soluble epoxide hydrolase complexed with cdu inhibitor 0.8499 76 191
2pr7-assembly2.cif.gz_B crystal structure of uncharacterized protein (np_599989.1) from corynebacterium glutamicum atcc 13032 kitasato at 1.44 a resolution 0.8285 68 187
1ek1-assembly1.cif.gz_A crystal structure of murine soluble epoxide hydrolase complexed with ciu inhibitor 0.8186 74 191
4hai-assembly1.cif.gz_A crystal structure of human soluble epoxide hydrolase complexed with n-cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide. 0.7896 2 191
5ai8-assembly1.cif.gz_A ligand complex structure of soluble epoxide hydrolase 0.7859 4 191
ID Description Score Start End Superfamily
2no5A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8777 72 171 3.40.50.1000
1ek2A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.865 76 185 3.40.50.1000
2b0cA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.857 71 179 3.40.50.1000
af_Q9VN95_123_242_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.843 79 169 3.40.50.1000
4jb3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8392 72 169 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A326U8U5-F1-model_v4 HAD superfamily hydrolase (TIGR01509 family)/HAD superfamily hydrolase (TIGR01549 family) 0.921 68 185 GO:0016787
AF-A0A3D4CNI4-F1-model_v4 HAD family phosphatase 0.9191 76 182
AF-A0A6I3EL15-F1-model_v4 HAD-IA family hydrolase 0.9111 71 185 GO:0016787
AF-A0A5B5W752-F1-model_v4 deleted 0.9088 76 185
AF-A0A2V6BY39-F1-model_v4 HAD family phosphatase 0.9061 62 183

Map