F304732

General Info

Members Datasets Scaffolds Average Seq Length
198 142 396 439

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0013783|Ga0436364_0013783_6395_7849
Length 484
Sequence LFWCETKAREAGVSSRKYEAEKPKDASHGLTSWVLALLRKRQIIQTFSALALVLSLAVPAHAQASRGSERNWVAAWTASAQGPFPVGNATAQPELKFALPSSERGASDQTFRLILRPDIWGGQARIRLSNVFGTKPVTFDDVELGLQSSGSVLVPHSSRPVTFDGKTKVVVPAGQSMMSDMVVLPWVKDKNDPMLANRKLAVSFHVVGDSGPITWHAKALTTSYISPPGSGSHAREETEMSFPFSSTSWYFLDEVQMAVPDAQTIVAFGDSITDGTASTLNGDDRWPDVFSRRVHAAFGNRFSIVNEGIGGNMVIGPANYAAEPFAGGPSALDRLERDVLNLPNVTQVIFLEGINDFGNARADPEKVEEGLRTFVDKLRARLPSAKFYIGTLTSAVHSTNGDSGSQTVEEKRRAYNEFIHSAGIFDGVIDFDAATIDKGTGELKAEFQPNSTTGGPGDKLHPNRAGYAAMANAIDFAKLFGAQP

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
92 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
101 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
102 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
103 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
109 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0
Isolates 0.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.53
Nodule 0.51
Rhizoplane 0.51
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 4.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0013783 3300037853 Bacteria 29941
2 Ga0055528_1001332 3300003790 Bacteria 15382
3 Ga0065715_10003043 3300005293 Bacteria 4294
4 Ga0070658_10019598 3300005327 Bacteria 5416
5 Ga0070683_100000013 3300005329 Bacteria 241235
6 Ga0070683_100103675 3300005329 Bacteria 2681
7 Ga0070660_100045686 3300005339 Bacteria 3354
8 Ga0070668_100247128 3300005347 Bacteria 1480
9 Ga0070669_100012710 3300005353 Bacteria 5977
10 Ga0070674_100004271 3300005356 Bacteria 8130
11 Ga0070673_100243908 3300005364 Bacteria 1563
12 Ga0070667_100031191 3300005367 Bacteria 4444
13 Ga0070709_10006902 3300005434 Bacteria 6199
14 Ga0070714_100044818 3300005435 Bacteria 3746
15 Ga0070713_100007917 3300005436 Bacteria 7502
16 Ga0070710_10000449 3300005437 Bacteria 19305
17 Ga0070711_100000494 3300005439 Bacteria 20534
18 Ga0070711_100098382 3300005439 Unclassified 2124
19 Ga0070678_100001484 3300005456 Bacteria 12524
20 Ga0070684_100000115 3300005535 Bacteria 51829
21 Ga0070684_100175401 3300005535 Unclassified 1948
22 Ga0070672_100057186 3300005543 Bacteria 3061
23 Ga0070665_100001207 3300005548 Bacteria 31493
24 Ga0070665_100017995 3300005548 Bacteria 7094
25 Ga0070704_100028677 3300005549 Bacteria 3707
26 Ga0068855_100018303 3300005563 Bacteria 8416
27 Ga0070664_100176498 3300005564 Bacteria 1897
28 Ga0068857_100023920 3300005577 Bacteria 5377
29 Ga0068852_100042154 3300005616 Bacteria 3863
30 Ga0068859_100015405 3300005617 Bacteria 7682
31 Ga0068864_100015213 3300005618 Bacteria 6400
32 Ga0068863_100013000 3300005841 Bacteria 8027
33 Ga0068863_100036912 3300005841 Bacteria 4653
34 Ga0068863_100059498 3300005841 Bacteria 3614
35 Ga0068863_100303614 3300005841 Bacteria 1549
36 Ga0068858_100026329 3300005842 Bacteria 5405
37 Ga0068858_100191141 3300005842 Bacteria 1935
38 Ga0068862_100213290 3300005844 Bacteria 1745
39 Ga0081455_10010553 3300005937 Bacteria 9359
40 Ga0075363_100016334 3300006048 Bacteria 3666
41 Ga0070716_100014521 3300006173 Bacteria 4034
42 Ga0070712_100005040 3300006175 Bacteria 8182
43 Ga0070712_100017725 3300006175 Bacteria 4612
44 Ga0097621_100057027 3300006237 Bacteria 3192
45 Ga0075428_100214422 3300006844 Bacteria 2080
46 Ga0075431_100149788 3300006847 Unclassified 2403
47 Ga0075434_100077432 3300006871 Bacteria 3320
48 Ga0075434_100129018 3300006871 Bacteria 2547
49 Ga0097620_100015405 3300006931 Bacteria 7682
50 Ga0075435_100116817 3300007076 Bacteria 2223
51 Ga0099795_10002865 3300007788 Bacteria 4171
52 Ga0111539_10013095 3300009094 Bacteria 10374
53 Ga0105245_10019427 3300009098 Bacteria 5953
54 Ga0105247_10029844 3300009101 Unclassified 3306
55 Ga0114129_10272856 3300009147 Bacteria 2262
56 Ga0105241_10005842 3300009174 Bacteria 9084
57 Ga0105242_10121835 3300009176 Bacteria 2239
58 Ga0105248_10039461 3300009177 Bacteria 5288
59 Ga0105238_10024007 3300009551 Bacteria 6217
60 Ga0105238_10102860 3300009551 Bacteria 2838
61 Ga0105249_10020040 3300009553 Bacteria 5974
62 Ga0105249_10062529 3300009553 Bacteria 3418
63 Ga0105249_10115545 3300009553 Bacteria 2543
64 Ga0105239_10021189 3300010375 Bacteria 7166
65 Ga0105239_10065974 3300010375 Bacteria 3977
66 Ga0105239_10117990 3300010375 Bacteria 2945
67 Ga0157378_10075093 3300013297 Bacteria 3042
68 Ga0157378_10251160 3300013297 Bacteria 1693
69 Ga0163162_10000800 3300013306 Bacteria 29265
70 Ga0163162_10165712 3300013306 Bacteria 2333
71 Ga0157375_10017927 3300013308 Bacteria 6407
72 Ga0157375_10098240 3300013308 Bacteria 3004
73 Ga0163163_10002084 3300014325 Bacteria 16888
74 Ga0163163_10023099 3300014325 Bacteria 5899
75 Ga0157379_10011091 3300014968 Bacteria 7857
76 Ga0163161_10092252 3300017792 Bacteria 2242
77 Ga0213876_10001556 3300021384 Bacteria 14102
78 Ga0213876_10030783 3300021384 Bacteria 2831
79 Ga0213876_10068651 3300021384 Bacteria 1872
80 Ga0213875_10000932 3300021388 Bacteria 21096
81 Ga0213875_10004174 3300021388 Bacteria 7998
82 Ga0213875_10020171 3300021388 Bacteria 3197
83 Ga0209673_1000706 3300025273 Bacteria 47121
84 Ga0209758_1002572 3300025297 Bacteria 18218
85 Ga0207697_10003106 3300025315 Bacteria 8305
86 Ga0207692_10031625 3300025898 Bacteria 2536
87 Ga0207680_10079914 3300025903 Bacteria 2052
88 Ga0207680_10108983 3300025903 Bacteria 1792
89 Ga0207699_10025413 3300025906 Bacteria 3251
90 Ga0207705_10015983 3300025909 Bacteria 5387
91 Ga0207705_10045846 3300025909 Bacteria 3141
92 Ga0207684_10047988 3300025910 Bacteria 3622
93 Ga0207654_10001770 3300025911 Bacteria 11224
94 Ga0207707_10067554 3300025912 Unclassified 3114
95 Ga0207695_10058920 3300025913 Bacteria 3985
96 Ga0207693_10040683 3300025915 Bacteria 3661
97 Ga0207693_10064658 3300025915 Bacteria 2865
98 Ga0207693_10075451 3300025915 Bacteria 2640
99 Ga0207693_10171046 3300025915 Bacteria 1711
100 Ga0207657_10101359 3300025919 Bacteria 2390
101 Ga0207646_10013493 3300025922 Bacteria 7811
102 Ga0207694_10027014 3300025924 Bacteria 4370
103 Ga0207694_10036170 3300025924 Bacteria 3789
104 Ga0207694_10056341 3300025924 Bacteria 3053
105 Ga0207700_10009147 3300025928 Bacteria 6170
106 Ga0207706_10109990 3300025933 Bacteria 2425
107 Ga0207665_10020395 3300025939 Bacteria 4355
108 Ga0207691_10006278 3300025940 Bacteria 11473
109 Ga0207661_10000018 3300025944 Bacteria 242506
110 Ga0207661_10094707 3300025944 Bacteria 2495
111 Ga0207667_10072824 3300025949 Bacteria 3571
112 Ga0207712_10036147 3300025961 Bacteria 3362
113 Ga0207703_10029289 3300026035 Bacteria 4343
114 Ga0207703_10041366 3300026035 Bacteria 3692
115 Ga0207641_10009616 3300026088 Bacteria 7968
116 Ga0207641_10171448 3300026088 Bacteria 1981
117 Ga0207674_10010413 3300026116 Bacteria 10535
118 Ga0207683_10004223 3300026121 Bacteria 12408
119 Ga0207683_10043197 3300026121 Bacteria 3939
120 Ga0207683_10043819 3300026121 Bacteria 3911
121 Ga0207698_10029742 3300026142 Bacteria 3917
122 Ga0268266_10011530 3300028379 Bacteria 7675
123 Ga0268266_10067724 3300028379 Bacteria 3090
124 Ga0268264_10139270 3300028381 Bacteria 2161
125 Ga0268264_10242318 3300028381 Bacteria 1671
126 Ga0265318_10052374 3300028577 Bacteria 1532
127 Ga0307509_10057645 3300031507 Bacteria 4117
128 Ga0307508_10000037 3300031616 Bacteria 151055
129 Ga0373943_0099575 3300035170 Unclassified 1518
130 Ga0373925_0064990 3300037068 Unclassified 2748
131 Ga0373925_0138123 3300037068 Bacteria 1906
132 Ga0436364_0283237 3300037853 Bacteria 2285
133 Ga0436364_1252080 3300037853 Bacteria 20627
134 Ga0436364_1269827 3300037853 Bacteria 4168
135 Ga0436365_0550158 3300039437 Bacteria 14211
136 Ga0436365_1136540 3300039437 Bacteria 40433
137 Ga0436365_1253031 3300039437 Bacteria 47093
138 Ga0436363_0121335 3300039450 Bacteria 5796
139 Ga0436363_0454518 3300039450 Bacteria 4139
140 Ga0436362_0941402 3300039453 Bacteria 4603
141 Ga0495603_0093526 3300046455 Bacteria 1757
142 Ga0495651_0043538 3300046462 Bacteria 3483
143 Ga0495580_0010886 3300046472 Bacteria 7059
144 Ga0495628_0087846 3300046516 Bacteria 2410
145 Ga0495642_0043774 3300046528 Bacteria 1826
146 Ga0495669_0080430 3300046684 Bacteria 1495
147 Ga0495604_0042261 3300047317 Bacteria 3573
148 Ga0495674_0018899 3300047319 Bacteria 6409
149 Ga0495684_0007409 3300047471 Bacteria 8504
150 Ga0495684_0052639 3300047471 Bacteria 3106
151 Ga0495684_0116236 3300047471 Bacteria 2017
152 Ga0495602_0063600 3300048088 Unclassified 3196
153 Ga0496106_0048035 3300048909 Bacteria 3213
154 Ga0496117_0053243 3300048920 Bacteria 2845
155 Ga0496117_0084222 3300048920 Bacteria 2075
156 Ga0496118_0022368 3300048921 Bacteria 5529
157 Ga0496121_0019914 3300048924 Bacteria 6677
158 Ga0496122_0062184 3300048925 Bacteria 2735
159 Ga0496124_0008072 3300048927 Bacteria 11068
160 Ga0496125_0000199 3300048928 Bacteria 126676
161 Ga0496125_0024457 3300048928 Bacteria 5554
162 Ga0496126_0052491 3300048929 Bacteria 3704
163 Ga0501032_0038323 3300049569 Bacteria 3265
164 Ga0501034_0044162 3300049571 Bacteria 4507
165 Ga0501034_0196042 3300049571 Bacteria 1979
166 Ga0501036_0129125 3300049572 Bacteria 2134
167 Ga0501038_0013521 3300049574 Bacteria 7440
168 Ga0501038_0026610 3300049574 Bacteria 5151
169 Ga0501039_0078225 3300049575 Bacteria 2573
170 Ga0501043_0036283 3300049579 Bacteria 3877
171 Ga0501046_0019500 3300049580 Bacteria 5625
172 Ga0501046_0024495 3300049580 Bacteria 4949
173 Ga0501047_0000090 3300049581 Bacteria 116416
174 Ga0501047_0126462 3300049581 Bacteria 2436
175 Ga0501048_0014928 3300049582 Bacteria 5745
176 Ga0501068_0108534 3300049584 Bacteria 1724
177 Ga0501069_0017843 3300049585 Bacteria 3827
178 Ga0501070_0111209 3300049586 Bacteria 2264
179 Ga0501073_0029464 3300049589 Bacteria 3922
180 Ga0501073_0035136 3300049589 Bacteria 3563
181 Ga0501073_0047314 3300049589 Bacteria 3023
182 Ga0501073_0112260 3300049589 Bacteria 1890
183 Ga0501075_0097691 3300049591 Bacteria 2229
184 Ga0501077_0074607 3300049593 Bacteria 2148
185 Ga0501080_0007801 3300049742 Bacteria 9680
186 Ga0501080_0258658 3300049742 Bacteria 1586
187 Ga0501083_0017738 3300049744 Bacteria 4964
188 Ga0501044_0041858 3300049823 Bacteria 4768
189 Ga0501045_0140877 3300049824 Bacteria 1793
190 nmdc:mga05p37_437081_c1 3300050507 Bacteria 1519
191 nmdc:mga08y16_21184_c1 3300050511 Bacteria 6864
192 nmdc:mga0n895_13545_c1 3300050512 Bacteria 7365
193 nmdc:mga0rr50_56180_c1 3300050513 Bacteria 2940
194 nmdc:mga0a205_7529_c1 3300050515 Bacteria 9862
195 Ga0500616_0000266 3300053153 Bacteria 78234
196 Ga0501084_0036381 3300054114 Bacteria 4111
197 Ga0501082_0000041 3300060353 Bacteria 90778
198 2513717945 2513237104 Bacteria 10034502
199 Ga0436364_0013783
200 Ga0055528_1001332
201 Ga0065715_10003043
202 Ga0070658_10019598
203 Ga0070683_100000013
204 Ga0070683_100103675
205 Ga0070660_100045686
206 Ga0070668_100247128
207 Ga0070669_100012710
208 Ga0070674_100004271
209 Ga0070673_100243908
210 Ga0070667_100031191
211 Ga0070709_10006902
212 Ga0070714_100044818
213 Ga0070713_100007917
214 Ga0070710_10000449
215 Ga0070711_100000494
216 Ga0070711_100098382
217 Ga0070678_100001484
218 Ga0070684_100000115
219 Ga0070684_100175401
220 Ga0070672_100057186
221 Ga0070665_100001207
222 Ga0070665_100017995
223 Ga0070704_100028677
224 Ga0068855_100018303
225 Ga0070664_100176498
226 Ga0068857_100023920
227 Ga0068852_100042154
228 Ga0068859_100015405
229 Ga0068864_100015213
230 Ga0068863_100013000
231 Ga0068863_100036912
232 Ga0068863_100059498
233 Ga0068863_100303614
234 Ga0068858_100026329
235 Ga0068858_100191141
236 Ga0068862_100213290
237 Ga0081455_10010553
238 Ga0075363_100016334
239 Ga0070716_100014521
240 Ga0070712_100005040
241 Ga0070712_100017725
242 Ga0097621_100057027
243 Ga0075428_100214422
244 Ga0075431_100149788
245 Ga0075434_100077432
246 Ga0075434_100129018
247 Ga0097620_100015405
248 Ga0075435_100116817
249 Ga0099795_10002865
250 Ga0111539_10013095
251 Ga0105245_10019427
252 Ga0105247_10029844
253 Ga0114129_10272856
254 Ga0105241_10005842
255 Ga0105242_10121835
256 Ga0105248_10039461
257 Ga0105238_10024007
258 Ga0105238_10102860
259 Ga0105249_10020040
260 Ga0105249_10062529
261 Ga0105249_10115545
262 Ga0105239_10021189
263 Ga0105239_10065974
264 Ga0105239_10117990
265 Ga0157378_10075093
266 Ga0157378_10251160
267 Ga0163162_10000800
268 Ga0163162_10165712
269 Ga0157375_10017927
270 Ga0157375_10098240
271 Ga0163163_10002084
272 Ga0163163_10023099
273 Ga0157379_10011091
274 Ga0163161_10092252
275 Ga0213876_10001556
276 Ga0213876_10030783
277 Ga0213876_10068651
278 Ga0213875_10000932
279 Ga0213875_10004174
280 Ga0213875_10020171
281 Ga0209673_1000706
282 Ga0209758_1002572
283 Ga0207697_10003106
284 Ga0207692_10031625
285 Ga0207680_10079914
286 Ga0207680_10108983
287 Ga0207699_10025413
288 Ga0207705_10015983
289 Ga0207705_10045846
290 Ga0207684_10047988
291 Ga0207654_10001770
292 Ga0207707_10067554
293 Ga0207695_10058920
294 Ga0207693_10040683
295 Ga0207693_10064658
296 Ga0207693_10075451
297 Ga0207693_10171046
298 Ga0207657_10101359
299 Ga0207646_10013493
300 Ga0207694_10027014
301 Ga0207694_10036170
302 Ga0207694_10056341
303 Ga0207700_10009147
304 Ga0207706_10109990
305 Ga0207665_10020395
306 Ga0207691_10006278
307 Ga0207661_10000018
308 Ga0207661_10094707
309 Ga0207667_10072824
310 Ga0207712_10036147
311 Ga0207703_10029289
312 Ga0207703_10041366
313 Ga0207641_10009616
314 Ga0207641_10171448
315 Ga0207674_10010413
316 Ga0207683_10004223
317 Ga0207683_10043197
318 Ga0207683_10043819
319 Ga0207698_10029742
320 Ga0268266_10011530
321 Ga0268266_10067724
322 Ga0268264_10139270
323 Ga0268264_10242318
324 Ga0265318_10052374
325 Ga0307509_10057645
326 Ga0307508_10000037
327 Ga0373943_0099575
328 Ga0373925_0064990
329 Ga0373925_0138123
330 Ga0436364_0283237
331 Ga0436364_1252080
332 Ga0436364_1269827
333 Ga0436365_0550158
334 Ga0436365_1136540
335 Ga0436365_1253031
336 Ga0436363_0121335
337 Ga0436363_0454518
338 Ga0436362_0941402
339 Ga0495603_0093526
340 Ga0495651_0043538
341 Ga0495580_0010886
342 Ga0495628_0087846
343 Ga0495642_0043774
344 Ga0495669_0080430
345 Ga0495604_0042261
346 Ga0495674_0018899
347 Ga0495684_0007409
348 Ga0495684_0052639
349 Ga0495684_0116236
350 Ga0495602_0063600
351 Ga0496106_0048035
352 Ga0496117_0053243
353 Ga0496117_0084222
354 Ga0496118_0022368
355 Ga0496121_0019914
356 Ga0496122_0062184
357 Ga0496124_0008072
358 Ga0496125_0000199
359 Ga0496125_0024457
360 Ga0496126_0052491
361 Ga0501032_0038323
362 Ga0501034_0044162
363 Ga0501034_0196042
364 Ga0501036_0129125
365 Ga0501038_0013521
366 Ga0501038_0026610
367 Ga0501039_0078225
368 Ga0501043_0036283
369 Ga0501046_0019500
370 Ga0501046_0024495
371 Ga0501047_0000090
372 Ga0501047_0126462
373 Ga0501048_0014928
374 Ga0501068_0108534
375 Ga0501069_0017843
376 Ga0501070_0111209
377 Ga0501073_0029464
378 Ga0501073_0035136
379 Ga0501073_0047314
380 Ga0501073_0112260
381 Ga0501075_0097691
382 Ga0501077_0074607
383 Ga0501080_0007801
384 Ga0501080_0258658
385 Ga0501083_0017738
386 Ga0501044_0041858
387 Ga0501045_0140877
388 nmdc:mga05p37_437081_c1
389 nmdc:mga08y16_21184_c1
390 nmdc:mga0n895_13545_c1
391 nmdc:mga0rr50_56180_c1
392 nmdc:mga0a205_7529_c1
393 Ga0500616_0000266
394 Ga0501084_0036381
395 Ga0501082_0000041
396 2513717945

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00657

Lipase_GDSL

GDSL-like Lipase/Acylhydrolase

265

474

0.84

PF13472

Lipase_GDSL_2

GDSL-like Lipase/Acylhydrolase family

267

469

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7tog-assembly1.cif.gz_A crystal structure of carbohydrate esterase pbeacxe, apoenzyme 0.8668 28 426
7tog-assembly1.cif.gz_A crystal structure of carbohydrate esterase pbeacxe, apoenzyme 0.8559 28 426
7pzh-assembly4.cif.gz_GGG phocaeicola vulgatus sialic acid esterase at 2.06 angstrom resolution 0.8474 204 427
4iyj-assembly1.cif.gz_B crystal structure of a putative acylhydrolase (bacuni_03406) from bacteroides uniformis atcc 8492 at 1.37 a resolution 0.846 209 428
3p94-assembly1.cif.gz_A crystal structure of a gdsl-like lipase (bdi_0976) from parabacteroides distasonis atcc 8503 at 1.93 a resolution 0.8408 209 428
ID Description Score Start End Superfamily
2hsjB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8212 208 426 3.40.50.1110
3p94D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8166 212 429 3.40.50.1110
4rw0B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8058 210 421 3.40.50.1110
4tx1C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7796 208 428 3.40.50.1110
1yzfA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7751 208 428 3.40.50.1110
ID Description Score Start End GO Terms
AF-A0A537V7Y2-F1-model_v4 Lysophospholipase 0.9775 140 430 GO:0052689
AF-A0A3A9JAW3-F1-model_v4 Lysophospholipase 0.973 23 430 GO:0052689
AF-A0A327K534-F1-model_v4 Lysophospholipase 0.971 20 427 GO:0052689
AF-A0A2G8MM95-F1-model_v4 deleted 0.9683 26 337
AF-A0A1D7UAY1-F1-model_v4 Lysophospholipase 0.9673 22 427 GO:0052689

Map