F304717

General Info

Members Datasets Scaffolds Average Seq Length
198 138 195 625

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0067117|Ga0395899_0067117_368_2407
Length 679
Sequence LLFSSSFVCYSDHNYIYTLINVILQTTFMNKKHTFSRCLLAVSFFIAVSSCTSVEKATVPDTLKQNSNHLITKEGFTFRDLNKNGKLDVYEDSRQPVEARIKDLLSQMTIEEKAGMMFINGARINDDGSIRDKPGKGMFAFAPNAMVLVRDKKMNHFNLWAIPSIDMLAKWYNSMQQYAEDSSRLGIPITIASDPRNHFTKNIFALSAASFSQWCEPLGLAAINDEKLTREFANDARQEYLAVGIREALHPQIGPTTEPRWPRIAGSFGEDAQLSARMATAYIKGFQTDTLGAESVATMTKHFPGGGPQFEGLDPHFPFQKGQVYPGNNFDYHLIPFKAAIAAHTAAMMPYYGVPMDSAHEHVGFSYNKGIITGLLRDQLHFDGIVCTDWGLVTDAHLGNVVWPARAWGVENLNTEQRVEKIIDAGVDQFGGENIPEVVVQLVKEGKISEKRIDTSVTRLLRLKFELGLFDNPYIDASKASQIVGKPEFKKAGEESQRRAITLLKNDNLNGQQNKVLPLKINALKIYVKNIDSAVAAQYGTVVSKPSDADIAIIRLNTPWYPVASDIPMAKMFHHGDLDFKGLQKDSILNLLKTVPTIVDIYLDRPAVIPEISANAKGLLADFGASDAAVMDVVFGKYKPGGHLPIELPSSMEAVRNQKEDVPYDSKDPLYHFGFGLSY

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
60 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
61 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
88 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
97 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
98 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
115 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
116 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
135 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
136 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
137 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
138 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.48
Metatranscriptomes 0
Isolates 1.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.62
Nodule 0
Rhizoplane 1.01
Rhizosphere 75.76
Stem 0
Stem Tuber 0
Unclassified 11.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1000006 3300002738 Bacteria 336396
2 JGI25406J46586_10002058 3300003203 Bacteria 9499
3 JGI25153J46596_10014522 3300003215 Bacteria 3268
4 rootH1_10000924 3300003316 Bacteria 10943
5 rootH1_10054254 3300003316 Bacteria 3475
6 rootH2_10011569 3300003320 Bacteria 50785
7 rootL2_10012282 3300003322 Bacteria 6170
8 rootL2_10156833 3300003322 Bacteria 6848
9 rootH1_10006645 3300003323 Bacteria 138273
10 rootH1_10017864 3300003323 Bacteria 25342
11 rootH1_10059513 3300003323 Bacteria 5551
12 rootH1_10085318 3300003323 Bacteria 10647
13 JGI25160J50197_1000358 3300003354 Bacteria 30190
14 Ga0055528_1003101 3300003790 Bacteria 8531
15 Ga0055530_10011514 3300003791 Bacteria 3168
16 Ga0055543_1002778 3300004625 Bacteria 5551
17 Ga0065165_1000042 3300005262 Bacteria 203874
18 Ga0070683_100036443 3300005329 Unclassified 4501
19 Ga0070690_100006555 3300005330 Bacteria 6608
20 Ga0068869_100072954 3300005334 Unclassified 2544
21 Ga0070680_100001780 3300005336 Bacteria 15819
22 Ga0068868_100038198 3300005338 Bacteria 3726
23 Ga0070661_100050507 3300005344 Bacteria 3043
24 Ga0070668_100031592 3300005347 Bacteria 4029
25 Ga0070668_100094685 3300005347 Bacteria 2358
26 Ga0070662_100017089 3300005457 Bacteria 4883
27 Ga0068867_100021650 3300005459 Bacteria 4589
28 Ga0070698_100001279 3300005471 Bacteria 28081
29 Ga0070698_100002592 3300005471 Bacteria 19910
30 Ga0070679_100001284 3300005530 Bacteria 22198
31 Ga0070684_100065357 3300005535 Unclassified 3192
32 Ga0068853_100040368 3300005539 Unclassified 3982
33 Ga0070686_100008632 3300005544 Bacteria 5710
34 Ga0070665_100086372 3300005548 Unclassified 3142
35 Ga0068855_100001787 3300005563 Bacteria 26881
36 Ga0068855_100001937 3300005563 Bacteria 25709
37 Ga0068855_100045379 3300005563 Bacteria 5198
38 Ga0070664_100035547 3300005564 Bacteria 4182
39 Ga0068856_100074830 3300005614 Unclassified 3354
40 Ga0068860_100033086 3300005843 Bacteria 4963
41 Ga0081540_1018303 3300005983 Bacteria 4303
42 Ga0081539_10000402 3300005985 Bacteria 92866
43 Ga0097621_100015940 3300006237 Bacteria 5668
44 Ga0075428_100000685 3300006844 Bacteria 34851
45 Ga0075428_100038722 3300006844 Bacteria 5246
46 Ga0075430_100010975 3300006846 Bacteria 7673
47 Ga0075431_100034200 3300006847 Bacteria 5236
48 Ga0068865_100003859 3300006881 Bacteria 8989
49 Ga0105240_10000086 3300009093 Bacteria 188623
50 Ga0105240_10000105 3300009093 Bacteria 172035
51 Ga0105240_10001556 3300009093 Bacteria 38962
52 Ga0105240_10045867 3300009093 Bacteria 5542
53 Ga0105240_10093051 3300009093 Bacteria 3680
54 Ga0111539_10094944 3300009094 Bacteria 3504
55 Ga0111539_10188256 3300009094 Bacteria 2409
56 Ga0114129_10028959 3300009147 Bacteria 7845
57 Ga0114129_10059779 3300009147 Bacteria 5328
58 Ga0114129_10078134 3300009147 Unclassified 4604
59 Ga0105241_10001477 3300009174 Bacteria 18004
60 Ga0105237_10001710 3300009545 Bacteria 28394
61 Ga0105237_10002518 3300009545 Bacteria 22691
62 Ga0105237_10007356 3300009545 Bacteria 12066
63 Ga0105237_10022659 3300009545 Bacteria 6442
64 Ga0105237_10082351 3300009545 Bacteria 3209
65 Ga0105238_10001372 3300009551 Bacteria 24425
66 Ga0105238_10015126 3300009551 Bacteria 7815
67 Ga0105238_10026900 3300009551 Bacteria 5863
68 Ga0105249_10016968 3300009553 Bacteria 6460
69 Ga0105239_10000119 3300010375 Bacteria 111612
70 Ga0105239_10000215 3300010375 Bacteria 85485
71 Ga0105239_10000432 3300010375 Bacteria 61084
72 Ga0105239_10002026 3300010375 Bacteria 26303
73 Ga0105239_10006232 3300010375 Bacteria 13874
74 Ga0157371_10008352 3300013102 Bacteria 8261
75 Ga0157370_10009065 3300013104 Bacteria 10672
76 Ga0157369_10024505 3300013105 Bacteria 6711
77 Ga0157374_10000042 3300013296 Bacteria 147627
78 Ga0157374_10032349 3300013296 Bacteria 4761
79 Ga0157378_10082238 3300013297 Bacteria 2912
80 Ga0163162_10004892 3300013306 Bacteria 12916
81 Ga0163162_10076971 3300013306 Bacteria 3399
82 Ga0157372_10000349 3300013307 Bacteria 50707
83 Ga0157372_10061171 3300013307 Bacteria 4215
84 Ga0157376_10002267 3300014969 Bacteria 12983
85 Ga0157376_10003341 3300014969 Bacteria 11030
86 Ga0163161_10020230 3300017792 Bacteria 4669
87 Ga0213876_10002520 3300021384 Bacteria 10737
88 Ga0209646_1000031 3300025246 Bacteria 381260
89 Ga0209026_1000019 3300025250 Bacteria 381260
90 Ga0209455_1004105 3300025272 Bacteria 4895
91 Ga0209673_1000113 3300025273 Bacteria 179012
92 Ga0209758_1004657 3300025297 Bacteria 11228
93 Ga0209758_1010225 3300025297 Bacteria 5656
94 Ga0209758_1014138 3300025297 Bacteria 4275
95 Ga0209050_1000185 3300025298 Bacteria 141889
96 Ga0209050_1002105 3300025298 Bacteria 18175
97 Ga0209050_1020853 3300025298 Bacteria 2418
98 Ga0207426_1000093 3300025302 Bacteria 277663
99 Ga0207426_1000263 3300025302 Bacteria 110923
100 Ga0207426_1001392 3300025302 Bacteria 20412
101 Ga0209257_1000257 3300025304 Bacteria 122448
102 Ga0207680_10024609 3300025903 Unclassified 3307
103 Ga0207645_10000088 3300025907 Bacteria 65894
104 Ga0207645_10004781 3300025907 Bacteria 9958
105 Ga0207707_10101411 3300025912 Bacteria 2516
106 Ga0207695_10000175 3300025913 Bacteria 188658
107 Ga0207695_10000193 3300025913 Bacteria 172070
108 Ga0207695_10000514 3300025913 Bacteria 82310
109 Ga0207695_10007678 3300025913 Bacteria 13660
110 Ga0207671_10001433 3300025914 Bacteria 27663
111 Ga0207660_10027275 3300025917 Bacteria 3896
112 Ga0207649_10035861 3300025920 Bacteria 2983
113 Ga0207694_10018258 3300025924 Bacteria 5302
114 Ga0207706_10006646 3300025933 Bacteria 10694
115 Ga0207689_10113115 3300025942 Unclassified 2231
116 Ga0207661_10004207 3300025944 Bacteria 10066
117 Ga0207661_10067984 3300025944 Bacteria 2900
118 Ga0207667_10003060 3300025949 Bacteria 20730
119 Ga0207667_10006628 3300025949 Bacteria 13998
120 Ga0207667_10009689 3300025949 Bacteria 11333
121 Ga0207640_10104616 3300025981 Bacteria 1993
122 Ga0207658_10071633 3300025986 Bacteria 2625
123 Ga0207702_10044310 3300026078 Bacteria 3739
124 Ga0207648_10041084 3300026089 Bacteria 4062
125 Ga0207674_10059156 3300026116 Bacteria 3879
126 Ga0207683_10000198 3300026121 Bacteria 51725
127 Ga0268265_10091400 3300028380 Unclassified 2434
128 Ga0268264_10040831 3300028381 Bacteria 3834
129 Ga0307517_10025589 3300028786 Bacteria 7207
130 Ga0307511_10000476 3300030521 Bacteria 43435
131 Ga0307509_10032500 3300031507 Bacteria 5750
132 Ga0307516_10000527 3300031730 Bacteria 51209
133 Ga0316577_10001705 3300031733 Bacteria 10549
134 Ga0307510_10006158 3300033180 Bacteria 14300
135 Ga0316584_0016696 3300036712 Bacteria 5266
136 Ga0373925_0078200 3300037068 Bacteria 2512
137 Ga0395899_0067117 3300037312 Bacteria 2632
138 Ga0316581_0007031 3300037588 Bacteria 3002
139 Ga0400490_56118 3300038726 Unclassified 3564
140 Ga0400487_50828 3300039110 Bacteria 2036
141 Ga0436365_1071287 3300039437 Bacteria 8414
142 Ga0451577_0050801 3300042876 Bacteria 3701
143 Ga0451577_0088393 3300042876 Bacteria 2765
144 Ga0466969_0010711 3300044656 Bacteria 4857
145 Ga0466972_0000004 3300044658 Bacteria 314413
146 Ga0466966_0000167 3300044684 Bacteria 43046
147 Ga0466961_0045310 3300044693 Bacteria 2814
148 Ga0453684_0001523 3300044712 Bacteria 64868
149 Ga0453684_0029184 3300044712 Bacteria 7844
150 Ga0453684_0069798 3300044712 Bacteria 4454
151 Ga0453684_0126646 3300044712 Bacteria 3072
152 Ga0453684_0135330 3300044712 Bacteria 2952
153 Ga0453684_0144095 3300044712 Bacteria 2840
154 Ga0466959_0000003 3300045049 Bacteria 285164
155 Ga0451576_0095710 3300045051 Bacteria 3088
156 Ga0451576_0101256 3300045051 Bacteria 2996
157 Ga0495638_0000004 3300046460 Bacteria 700795
158 Ga0495638_0022965 3300046460 Unclassified 4087
159 Ga0495651_0048765 3300046462 Unclassified 3270
160 Ga0495606_0004024 3300046507 Bacteria 14990
161 Ga0495648_0004897 3300046524 Bacteria 11264
162 Ga0495633_0000039 3300046558 Bacteria 180652
163 Ga0495667_0011903 3300046559 Bacteria 5894
164 Ga0495611_0000009 3300046648 Bacteria 160002
165 Ga0495657_0090878 3300046675 Unclassified 1959
166 Ga0495649_0034822 3300046694 Bacteria 2770
167 Ga0495680_0043412 3300047322 Unclassified 3560
168 Ga0495687_000079 3300047443 Bacteria 147704
169 Ga0496108_0000177 3300048911 Bacteria 59075
170 Ga0496114_0000632 3300048917 Bacteria 26002
171 Ga0501034_0078332 3300049571 Bacteria 3309
172 Ga0501036_0040991 3300049572 Unclassified 3918
173 Ga0501038_0020879 3300049574 Bacteria 5886
174 Ga0501043_0006481 3300049579 Bacteria 9399
175 Ga0501046_0102100 3300049580 Unclassified 2199
176 Ga0501047_0024953 3300049581 Bacteria 5742
177 Ga0501047_0092187 3300049581 Bacteria 2908
178 Ga0501047_0146508 3300049581 Unclassified 2238
179 Ga0501070_0094754 3300049586 Bacteria 2471
180 Ga0501264_000566 3300049761 Bacteria 5336
181 Ga0501044_0055828 3300049823 Bacteria 4055
182 Ga0501044_0278709 3300049823 Unclassified 1606
183 nmdc:mga05p37_200655_c1 3300050507 Bacteria 2416
184 nmdc:mga05p37_66129_c1 3300050507 Unclassified 4447
185 nmdc:mga05p37_72718_c2 3300050507 Unclassified 3686
186 nmdc:mga09592_10897_c1 3300050508 Bacteria 7399
187 nmdc:mga09592_4352_c1 3300050508 Bacteria 11446
188 nmdc:mga06r32_109784_c1 3300050510 Bacteria 2713
189 nmdc:mga08y16_193753_c1 3300050511 Bacteria 2107
190 nmdc:mga08y16_223522_c1 3300050511 Bacteria 1948
191 Ga0500583_0000071 3300053092 Bacteria 60351
192 Ga0500568_0004727 3300053139 Bacteria 7216
193 Ga0500604_0007757 3300053151 Bacteria 2844
194 Ga0500622_0000041 3300053156 Bacteria 170067
195 Ga0500622_0000045 3300053156 Bacteria 158316

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046675 Ga0495657_0090878 Ga0495657_0090878_61_1692 523
2 3300047322 Ga0495680_0043412 Ga0495680_0043412_27_1658 523
3 3300049823 Ga0501044_0278709 Ga0501044_0278709_13_1590 525
4 3300009545 Ga0105237_10082351 Ga0105237_100823513 535
5 3300037068 Ga0373925_0078200 Ga0373925_0078200_888_2498 535
6 3300009094 Ga0111539_10188256 Ga0111539_101882561 554
7 3300050511 nmdc:mga08y16_223522_c1 nmdc:mga08y16_223522_c1_145_1827 554
8 3300049581 Ga0501047_0092187 Ga0501047_0092187_29_1747 562
9 3300025914 Ga0207671_10001433 Ga0207671_100014337 564
10 3300045051 Ga0451576_0101256 Ga0451576_0101256_1266_2981 568
11 3300046462 Ga0495651_0048765 Ga0495651_0048765_14_1801 573
12 3300028381 Ga0268264_10040831 Ga0268264_100408311 584
13 3300039110 Ga0400487_50828 Ga0400487_50828_59_1840 584
14 3300005330 Ga0070690_100006555 Ga0070690_1000065553 585
15 3300005338 Ga0068868_100038198 Ga0068868_1000381983 585
16 3300005344 Ga0070661_100050507 Ga0070661_1000505072 585
17 3300005457 Ga0070662_100017089 Ga0070662_1000170893 585
18 3300005544 Ga0070686_100008632 Ga0070686_1000086323 585
19 3300010375 Ga0105239_10006232 Ga0105239_100062329 585
20 3300017792 Ga0163161_10020230 Ga0163161_100202302 585
21 3300025903 Ga0207680_10024609 Ga0207680_100246092 585
22 3300025920 Ga0207649_10035861 Ga0207649_100358612 585
23 3300025933 Ga0207706_10006646 Ga0207706_100066466 585
24 3300025981 Ga0207640_10104616 Ga0207640_101046161 585
25 3300026089 Ga0207648_10041084 Ga0207648_100410842 585
26 3300014969 Ga0157376_10002267 Ga0157376_100022673 586
27 3300048917 Ga0496114_0000632 Ga0496114_0000632_9535_11328 586
28 3300025944 Ga0207661_10067984 Ga0207661_100679844 588
29 3300003316 rootH1_10000924 rootH1_100009246 590
30 3300005336 Ga0070680_100001780 Ga0070680_10000178013 594
31 3300005530 Ga0070679_100001284 Ga0070679_10000128414 594
32 3300025917 Ga0207660_10027275 Ga0207660_100272752 594
33 3300046559 Ga0495667_0011903 Ga0495667_0011903_3815_5665 594
34 3300042876 Ga0451577_0088393 Ga0451577_0088393_661_2517 595
35 3300050508 nmdc:mga09592_10897_c1 nmdc:mga09592_10897_c1_2082_3971 597
36 3300050511 nmdc:mga08y16_193753_c1 nmdc:mga08y16_193753_c1_223_2046 600
37 3300048911 Ga0496108_0000177 Ga0496108_0000177_2122_3963 601
38 3300044712 Ga0453684_0126646 Ga0453684_0126646_821_2665 604
39 3300045051 Ga0451576_0095710 Ga0451576_0095710_650_2494 604
40 3300036712 Ga0316584_0016696 Ga0316584_0016696_1087_2910 606
41 3300038726 Ga0400490_56118 Ga0400490_56118_953_2788 606
42 3300031733 Ga0316577_10001705 Ga0316577_100017057 607
43 3300037588 Ga0316581_0007031 Ga0316581_0007031_95_1939 607
44 3300044712 Ga0453684_0144095 Ga0453684_0144095_710_2566 607
45 3300025298 Ga0209050_1002105 Ga0209050_10021059 611
46 3300025912 Ga0207707_10101411 Ga0207707_101014112 613
47 3300031507 Ga0307509_10032500 Ga0307509_100325002 613
48 3300053092 Ga0500583_0000071 Ga0500583_0000071_3754_5616 613
49 3300005471 Ga0070698_100002592 Ga0070698_10000259210 614
50 3300013307 Ga0157372_10000349 Ga0157372_100003496 614
51 3300044712 Ga0453684_0135330 Ga0453684_0135330_157_2031 614
52 3300003322 rootL2_10012282 rootL2_100122823 615
53 3300003323 rootH1_10017864 rootH1_1001786414 615
54 3300025298 Ga0209050_1020853 Ga0209050_10208532 615
55 3300046460 Ga0495638_0000004 Ga0495638_0000004_221288_223159 615
56 3300049761 Ga0501264_000566 Ga0501264_000566_1085_2965 615
57 3300005334 Ga0068869_100072954 Ga0068869_1000729541 616
58 3300005347 Ga0070668_100094685 Ga0070668_1000946852 616
59 3300013297 Ga0157378_10082238 Ga0157378_100822382 616
60 3300013306 Ga0163162_10004892 Ga0163162_100048922 616
61 3300013306 Ga0163162_10076971 Ga0163162_100769712 616
62 3300025907 Ga0207645_10004781 Ga0207645_100047814 616
63 3300003322 rootL2_10156833 rootL2_101568333 617
64 3300003323 rootH1_10085318 rootH1_100853183 617
65 3300006846 Ga0075430_100010975 Ga0075430_1000109752 617
66 3300006847 Ga0075431_100034200 Ga0075431_1000342003 617
67 3300009147 Ga0114129_10028959 Ga0114129_100289596 617
68 3300050507 nmdc:mga05p37_200655_c1 nmdc:mga05p37_200655_c1_44_1918 617
69 3300050510 nmdc:mga06r32_109784_c1 nmdc:mga06r32_109784_c1_264_2216 617
70 3300053151 Ga0500604_0007757 Ga0500604_0007757_330_2207 617
71 3300053156 Ga0500622_0000045 Ga0500622_0000045_46386_48263 617
72 3300005471 Ga0070698_100001279 Ga0070698_10000127920 618
73 3300005539 Ga0068853_100040368 Ga0068853_1000403683 618
74 3300005614 Ga0068856_100074830 Ga0068856_1000748302 618
75 3300006844 Ga0075428_100000685 Ga0075428_1000006857 618
76 3300006844 Ga0075428_100038722 Ga0075428_1000387224 618
77 3300009093 Ga0105240_10001556 Ga0105240_1000155620 618
78 3300009094 Ga0111539_10094944 Ga0111539_100949442 618
79 3300009147 Ga0114129_10059779 Ga0114129_100597794 618
80 3300009174 Ga0105241_10001477 Ga0105241_100014779 618
81 3300009545 Ga0105237_10022659 Ga0105237_100226592 618
82 3300009551 Ga0105238_10001372 Ga0105238_1000137211 618
83 3300009553 Ga0105249_10016968 Ga0105249_100169686 618
84 3300025913 Ga0207695_10007678 Ga0207695_100076785 618
85 3300049586 Ga0501070_0094754 Ga0501070_0094754_533_2437 618
86 3300050507 nmdc:mga05p37_72718_c2 nmdc:mga05p37_72718_c2_1143_3020 618
87 3300050508 nmdc:mga09592_4352_c1 nmdc:mga09592_4352_c1_3024_4901 618
88 3300053156 Ga0500622_0000041 Ga0500622_0000041_99179_101077 618
89 3300003203 JGI25406J46586_10002058 JGI25406J46586_100020582 619
90 3300005563 Ga0068855_100001937 Ga0068855_1000019377 619
91 3300005983 Ga0081540_1018303 Ga0081540_10183032 619
92 3300009545 Ga0105237_10001710 Ga0105237_1000171013 619
93 3300009545 Ga0105237_10002518 Ga0105237_1000251815 619
94 3300009551 Ga0105238_10026900 Ga0105238_100269005 619
95 3300010375 Ga0105239_10000119 Ga0105239_1000011945 619
96 3300010375 Ga0105239_10002026 Ga0105239_100020265 619
97 3300025924 Ga0207694_10018258 Ga0207694_100182583 619
98 3300025949 Ga0207667_10009689 Ga0207667_100096897 619
99 3300044693 Ga0466961_0045310 Ga0466961_0045310_19_1902 619
100 3300046558 Ga0495633_0000039 Ga0495633_0000039_16208_18112 619
101 3300046694 Ga0495649_0034822 Ga0495649_0034822_466_2349 619
102 3300003320 rootH2_10011569 rootH2_1001156915 620
103 3300009093 Ga0105240_10000086 Ga0105240_1000008646 620
104 3300009093 Ga0105240_10000105 Ga0105240_1000010545 620
105 3300009551 Ga0105238_10015126 Ga0105238_100151265 620
106 3300010375 Ga0105239_10000215 Ga0105239_1000021536 620
107 3300025913 Ga0207695_10000175 Ga0207695_10000175100 620
108 3300025913 Ga0207695_10000193 Ga0207695_1000019393 620
109 3300026078 Ga0207702_10044310 Ga0207702_100443101 620
110 3300047443 Ga0495687_000079 Ga0495687_000079_80336_82228 620
111 3300005564 Ga0070664_100035547 Ga0070664_1000355473 621
112 3300009147 Ga0114129_10078134 Ga0114129_100781342 621
113 3300021384 Ga0213876_10002520 Ga0213876_100025203 621
114 3300025272 Ga0209455_1004105 Ga0209455_10041052 621
115 3300039437 Ga0436365_1071287 Ga0436365_1071287_5838_7727 621
116 3300046460 Ga0495638_0022965 Ga0495638_0022965_2001_3896 621
117 3300046524 Ga0495648_0004897 Ga0495648_0004897_4705_6600 621
118 3300050507 nmdc:mga05p37_66129_c1 nmdc:mga05p37_66129_c1_694_2595 621
119 3300053139 Ga0500568_0004727 Ga0500568_0004727_3810_5705 621
120 3300003316 rootH1_10054254 rootH1_100542542 622
121 3300013104 Ga0157370_10009065 Ga0157370_100090652 623
122 3300030521 Ga0307511_10000476 Ga0307511_100004762 623
123 3300044712 Ga0453684_0029184 Ga0453684_0029184_5265_7223 623
124 3300005329 Ga0070683_100036443 Ga0070683_1000364432 624
125 3300005535 Ga0070684_100065357 Ga0070684_1000653572 624
126 3300005563 Ga0068855_100045379 Ga0068855_1000453792 624
127 3300009093 Ga0105240_10045867 Ga0105240_100458672 624
128 3300013296 Ga0157374_10000042 Ga0157374_1000004250 624
129 3300014969 Ga0157376_10003341 Ga0157376_100033414 624
130 3300025913 Ga0207695_10000514 Ga0207695_1000051455 624
131 3300025944 Ga0207661_10004207 Ga0207661_100042076 624
132 3300025949 Ga0207667_10003060 Ga0207667_100030606 624
133 3300044712 Ga0453684_0001523 Ga0453684_0001523_14011_15984 624
134 3300042876 Ga0451577_0050801 Ga0451577_0050801_803_2764 625
135 iso_pu_bacteria 2522125168 2522553413 625
136 3300003354 JGI25160J50197_1000358 JGI25160J50197_100035817 626
137 3300025302 Ga0207426_1000093 Ga0207426_1000093121 626
138 3300044712 Ga0453684_0069798 Ga0453684_0069798_2068_4050 626
139 iso_pu_bacteria 2929921140 2929921396 626
140 iso_pu_bacteria 8003151029 8003157563 626
141 3300049571 Ga0501034_0078332 Ga0501034_0078332_1264_3171 627
142 3300049572 Ga0501036_0040991 Ga0501036_0040991_978_2885 627
143 3300049574 Ga0501038_0020879 Ga0501038_0020879_1203_3110 627
144 3300049579 Ga0501043_0006481 Ga0501043_0006481_7209_9116 627
145 3300049580 Ga0501046_0102100 Ga0501046_0102100_31_1938 627
146 3300049581 Ga0501047_0146508 Ga0501047_0146508_284_2191 627
147 3300049823 Ga0501044_0055828 Ga0501044_0055828_1468_3375 627
148 3300005347 Ga0070668_100031592 Ga0070668_1000315923 628
149 3300005548 Ga0070665_100086372 Ga0070665_1000863721 628
150 3300005843 Ga0068860_100033086 Ga0068860_1000330863 628
151 3300005985 Ga0081539_10000402 Ga0081539_1000040242 628
152 3300006237 Ga0097621_100015940 Ga0097621_1000159404 628
153 3300006881 Ga0068865_100003859 Ga0068865_1000038595 628
154 3300010375 Ga0105239_10000432 Ga0105239_1000043236 628
155 3300013296 Ga0157374_10032349 Ga0157374_100323493 628
156 3300025907 Ga0207645_10000088 Ga0207645_1000008819 628
157 3300025942 Ga0207689_10113115 Ga0207689_101131151 628
158 3300025986 Ga0207658_10071633 Ga0207658_100716332 628
159 3300026121 Ga0207683_10000198 Ga0207683_1000019843 628
160 3300028380 Ga0268265_10091400 Ga0268265_100914001 628
161 3300003323 rootH1_10006645 rootH1_1000664599 629
162 3300003323 rootH1_10059513 rootH1_100595132 629
163 3300005459 Ga0068867_100021650 Ga0068867_1000216503 629
164 3300005563 Ga0068855_100001787 Ga0068855_10000178715 629
165 3300009093 Ga0105240_10093051 Ga0105240_100930512 629
166 3300009545 Ga0105237_10007356 Ga0105237_100073569 629
167 3300013102 Ga0157371_10008352 Ga0157371_100083523 629
168 3300013105 Ga0157369_10024505 Ga0157369_100245054 629
169 3300013307 Ga0157372_10061171 Ga0157372_100611712 629
170 3300025949 Ga0207667_10006628 Ga0207667_1000662813 629
171 3300026116 Ga0207674_10059156 Ga0207674_100591562 629
172 3300028786 Ga0307517_10025589 Ga0307517_100255894 629
173 3300031730 Ga0307516_10000527 Ga0307516_100005277 629
174 3300033180 Ga0307510_10006158 Ga0307510_100061586 629
175 3300037312 Ga0395899_0067117 Ga0395899_0067117_368_2407 629
176 3300044656 Ga0466969_0010711 Ga0466969_0010711_2336_4273 629
177 3300044658 Ga0466972_0000004 Ga0466972_0000004_283692_285608 629
178 3300044684 Ga0466966_0000167 Ga0466966_0000167_34970_36907 629
179 3300045049 Ga0466959_0000003 Ga0466959_0000003_95495_97432 629
180 3300046507 Ga0495606_0004024 Ga0495606_0004024_8434_10389 629
181 3300046648 Ga0495611_0000009 Ga0495611_0000009_94864_96882 629
182 3300049581 Ga0501047_0024953 Ga0501047_0024953_1530_3434 629
183 3300002738 JGI25154J39366_1000006 JGI25154J39366_100000636 630
184 3300003215 JGI25153J46596_10014522 JGI25153J46596_100145222 630
185 3300003790 Ga0055528_1003101 Ga0055528_10031016 630
186 3300003791 Ga0055530_10011514 Ga0055530_100115141 630
187 3300004625 Ga0055543_1002778 Ga0055543_10027782 630
188 3300005262 Ga0065165_1000042 Ga0065165_100004222 630
189 3300025246 Ga0209646_1000031 Ga0209646_100003170 630
190 3300025250 Ga0209026_1000019 Ga0209026_100001970 630
191 3300025273 Ga0209673_1000113 Ga0209673_1000113109 630
192 3300025297 Ga0209758_1004657 Ga0209758_10046573 630
193 3300025297 Ga0209758_1010225 Ga0209758_10102252 630
194 3300025297 Ga0209758_1014138 Ga0209758_10141384 630
195 3300025298 Ga0209050_1000185 Ga0209050_1000185106 630
196 3300025302 Ga0207426_1000263 Ga0207426_100026373 630
197 3300025302 Ga0207426_1001392 Ga0207426_100139212 630
198 3300025304 Ga0209257_1000257 Ga0209257_100025742 630

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00933

Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

166

463

0.86

PF01915

Glyco_hydro_3_C

Glycosyl hydrolase family 3 C-terminal domain

529

679

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qef-assembly1.cif.gz_A crystal structure of para-nitrophenyl-beta-d-glucuronide bound to a mutant of sn243 (d415a) 0.8918 20 630
7qee-assembly1.cif.gz_A sn243 mutant d415n bound to para-nitrophenyl-beta-d-glucuronide 0.8813 21 630
7qg4-assembly2.cif.gz_B apo crystal structure of a mutant of sn243 (d415n) 0.8807 21 630
7qe2-assembly1.cif.gz_A crystal structure of d-glucuronic acid bound to sn243 0.8767 21 630
7qe1-assembly2.cif.gz_B crystal structure of apo sn243 0.8759 21 630
ID Description Score Start End Superfamily
5m6gA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase, family 3, N-terminal domain 0.8514 45 442 3.20.20.300
5m6gA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase, family 3, N-terminal domain 0.8492 45 442 3.20.20.300
5tf0A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase, family 3, N-terminal domain 0.8442 57 448 3.20.20.300
5z9sB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase, family 3, N-terminal domain 0.8398 61 441 3.20.20.300
4zoaB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase, family 3, N-terminal domain 0.8347 57 431 3.20.20.300
ID Description Score Start End GO Terms
AF-X0X4A7-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9821 108 370 GO:0008422
GO:0009251
AF-A0A352M9X8-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9789 80 630 GO:0008422
GO:0009251
AF-A0A4Q2M1Z2-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9783 52 630 GO:0008422
GO:0009251
AF-A0A7Y5R5J6-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9782 33 630 GO:0008422
GO:0009251
AF-A0A7G6XGC9-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9763 45 630 GO:0008422
GO:0009251

Feature Viewer

pLDDT pTM Quality
91.79 0.92 High
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Predicted Structure (AlphaFold2)

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