F304684

General Info

Members Datasets Scaffolds Average Seq Length
198 92 380 529

Family's Representative Sequence

Representative Sequence 3300035118|Ga0373954_0006040|Ga0373954_0006040_952_2682
Length 576
Sequence MVHAAAYYCGYCPGYAVALPIVPLPAVASAAENSFYDTDKQGQVMPLGKMPFGLTAFVLALLIVAVPGFAQKSGGVLRIYHRDSPASMSVLEEASLSTSMPMMPVFNNLVLYDQHVAQNSLASIVPDLATSWRTSDDGKRLMFELRNGVKWHDGRPFSAADVKCTWDLLLDKASPKLRINPRAAWYSNVEEVVANGNTEAVFILKRPQPALIALLASGYAPIYPCHVPPAAMRHHPIGTGPFKFVEFKPNERISLTRNSDYWKPGRPYLDGIEFSIIPNRSTAILAFISGKFDLTWPYDVAIPLVKDIKAQAPKAICDTVSMNASRTLDINPKAPPFDNSEIRRAMALSLDRKAFLDILGDGHGEIGGAMLPPPAGVWGLTPNMLQELPGYGPDIAKNRAEARAIMAKFGYGPDHPLKIKVSARNIPIARDPAVIVIDQLKSIYIEGELDLVDTAVWFPKLARHGYTVALGLGASGVDDPDQQFYQNYACGSLLNVTGYCNRDIEKMFDRQSMEADPQKRKALVQQIDERLQQDGARPVIYYNDAATCWQPYVKGLTIMVNSIYNGWRMEDVWLDR

Samples

Sample ID Description Type Environment
1 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
57 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
58 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
59 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
60 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
64 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
70 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
71 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
72 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
73 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
78 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
81 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
82 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
84 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
85 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
86 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
87 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
88 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
89 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
90 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
91 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
92 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 0
Rhizoplane 3.54
Rhizosphere 84.34
Stem 0
Stem Tuber 0
Unclassified 3.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373954_0006040 3300035118 Bacteria 5268
2 JGI25406J46586_10000010 3300003203 Bacteria 109792
3 Ga0070683_100138496 3300005329 Bacteria 2305
4 Ga0070670_100033707 3300005331 Bacteria 4410
5 Ga0070671_100003213 3300005355 Bacteria 12742
6 Ga0070671_100008406 3300005355 Bacteria 8274
7 Ga0070671_100026424 3300005355 Bacteria 4770
8 Ga0070671_100181549 3300005355 Bacteria 1781
9 Ga0070709_10034301 3300005434 Bacteria 3076
10 Ga0070709_10037360 3300005434 Bacteria 2965
11 Ga0070709_10042170 3300005434 Bacteria 2816
12 Ga0070709_10057128 3300005434 Bacteria 2470
13 Ga0070714_100049326 3300005435 Bacteria 3583
14 Ga0070714_100059722 3300005435 Bacteria 3270
15 Ga0070714_100136224 3300005435 Unclassified 2199
16 Ga0070713_100009882 3300005436 Bacteria 6865
17 Ga0070713_100041591 3300005436 Bacteria 3745
18 Ga0070713_100133804 3300005436 Bacteria 2189
19 Ga0070710_10010774 3300005437 Bacteria 4497
20 Ga0070710_10044740 3300005437 Bacteria 2457
21 Ga0070711_100036713 3300005439 Bacteria 3284
22 Ga0070681_10040602 3300005458 Bacteria 4661
23 Ga0070681_10120983 3300005458 Bacteria 2553
24 Ga0070706_100027265 3300005467 Bacteria 5256
25 Ga0070706_100032939 3300005467 Bacteria 4781
26 Ga0070706_100046997 3300005467 Bacteria 3983
27 Ga0070706_100051946 3300005467 Plasmid 3784
28 Ga0070706_100062468 3300005467 Bacteria 3442
29 Ga0070707_100005179 3300005468 Bacteria 12217
30 Ga0070707_100031790 3300005468 Bacteria 5028
31 Ga0070707_100129643 3300005468 Bacteria 2452
32 Ga0070707_100141114 3300005468 Bacteria 2345
33 Ga0070698_100003768 3300005471 Bacteria 16655
34 Ga0070698_100054593 3300005471 Bacteria 4055
35 Ga0070698_100137583 3300005471 Bacteria 2395
36 Ga0070684_100083123 3300005535 Bacteria 2836
37 Ga0070697_100108333 3300005536 Bacteria 2312
38 Ga0068856_100128951 3300005614 Bacteria 2533
39 Ga0068860_100201730 3300005843 Bacteria 1928
40 Ga0081540_1005085 3300005983 Bacteria 9868
41 Ga0081540_1007917 3300005983 Bacteria 7500
42 Ga0081540_1008190 3300005983 Bacteria 7321
43 Ga0081540_1008231 3300005983 Bacteria 7307
44 Ga0070717_10005557 3300006028 Bacteria 9197
45 Ga0070717_10011384 3300006028 Bacteria 6752
46 Ga0070717_10104233 3300006028 Bacteria 2412
47 Ga0070717_10139187 3300006028 Bacteria 2092
48 Ga0070716_100082643 3300006173 Bacteria 1921
49 Ga0070712_100020833 3300006175 Bacteria 4296
50 Ga0075428_100004129 3300006844 Bacteria 15990
51 Ga0075430_100012920 3300006846 Bacteria 7116
52 Ga0075431_100002871 3300006847 Bacteria 16671
53 Ga0075429_100003443 3300006880 Bacteria 13503
54 Ga0075436_100043660 3300006914 Bacteria 3091
55 Ga0075436_100073937 3300006914 Bacteria 2359
56 Ga0075436_100078006 3300006914 Bacteria 2294
57 Ga0099795_10001249 3300007788 Bacteria 5390
58 Ga0099795_10001256 3300007788 Bacteria 5383
59 Ga0099795_10003659 3300007788 Bacteria 3845
60 Ga0099795_10023410 3300007788 Bacteria 2050
61 Ga0099795_10026113 3300007788 Unclassified 1965
62 Ga0111539_10010264 3300009094 Bacteria 11795
63 Ga0114129_10000046 3300009147 Bacteria 105492
64 Ga0099796_10003985 3300010159 Bacteria 3509
65 Ga0099796_10005525 3300010159 Bacteria 3162
66 Ga0099796_10008341 3300010159 Bacteria 2758
67 Ga0105239_10182117 3300010375 Bacteria 2351
68 Ga0157370_10057890 3300013104 Bacteria 3683
69 Ga0157375_10143742 3300013308 Bacteria 2515
70 Ga0182008_10009553 3300014497 Bacteria 5225
71 Ga0182008_10023147 3300014497 Bacteria 3177
72 Ga0182008_10042262 3300014497 Bacteria 2271
73 Ga0157376_10131676 3300014969 Bacteria 2232
74 Ga0213875_10000261 3300021388 Bacteria 52787
75 Ga0213875_10000490 3300021388 Bacteria 33517
76 Ga0213875_10000847 3300021388 Bacteria 22615
77 Ga0213875_10002556 3300021388 Bacteria 10845
78 Ga0213875_10003252 3300021388 Bacteria 9315
79 Ga0207680_10072867 3300025903 Bacteria 2134
80 Ga0207699_10011509 3300025906 Bacteria 4471
81 Ga0207699_10020678 3300025906 Bacteria 3533
82 Ga0207699_10033106 3300025906 Unclassified 2918
83 Ga0207684_10026115 3300025910 Bacteria 4977
84 Ga0207684_10041587 3300025910 Bacteria 3896
85 Ga0207684_10059297 3300025910 Bacteria 3249
86 Ga0207684_10085313 3300025910 Bacteria 2690
87 Ga0207684_10107715 3300025910 Unclassified 2384
88 Ga0207707_10029556 3300025912 Bacteria 4793
89 Ga0207693_10005112 3300025915 Bacteria 10997
90 Ga0207693_10005495 3300025915 Bacteria 10558
91 Ga0207693_10013106 3300025915 Bacteria 6689
92 Ga0207693_10023885 3300025915 Bacteria 4852
93 Ga0207663_10013856 3300025916 Bacteria 4396
94 Ga0207663_10046537 3300025916 Bacteria 2673
95 Ga0207652_10042024 3300025921 Bacteria 3889
96 Ga0207652_10087380 3300025921 Bacteria 2734
97 Ga0207646_10006727 3300025922 Bacteria 11840
98 Ga0207646_10024927 3300025922 Bacteria 5473
99 Ga0207646_10034235 3300025922 Bacteria 4591
100 Ga0207646_10086663 3300025922 Bacteria 2802
101 Ga0207646_10105785 3300025922 Bacteria 2523
102 Ga0207659_10127204 3300025926 Bacteria 1961
103 Ga0207700_10012896 3300025928 Bacteria 5409
104 Ga0207700_10024739 3300025928 Bacteria 4160
105 Ga0207700_10072852 3300025928 Bacteria 2650
106 Ga0207700_10148265 3300025928 Bacteria 1936
107 Ga0207664_10101982 3300025929 Bacteria 2372
108 Ga0207664_10178629 3300025929 Bacteria 1821
109 Ga0207644_10053335 3300025931 Bacteria 2909
110 Ga0207665_10040883 3300025939 Bacteria 3095
111 Ga0207665_10050470 3300025939 Bacteria 2797
112 Ga0207665_10059182 3300025939 Bacteria 2592
113 Ga0207661_10111484 3300025944 Bacteria 2315
114 Ga0207703_10176087 3300026035 Bacteria 1885
115 Ga0207703_10217467 3300026035 Bacteria 1707
116 Ga0207702_10034320 3300026078 Bacteria 4240
117 Ga0207702_10122023 3300026078 Unclassified 2333
118 Ga0207702_10131767 3300026078 Bacteria 2251
119 Ga0207702_10149858 3300026078 Bacteria 2121
120 Ga0209179_1000399 3300027512 Bacteria 4307
121 Ga0209179_1007686 3300027512 Bacteria 1788
122 Ga0265325_10054093 3300031241 Bacteria 2056
123 Ga0373926_0004816 3300035083 Bacteria 4439
124 Ga0373954_0012195 3300035118 Bacteria 3821
125 Ga0373957_0018383 3300035120 Bacteria 2448
126 Ga0373943_0038895 3300035170 Bacteria 2289
127 Ga0373955_0004955 3300035172 Bacteria 5943
128 Ga0373924_0041287 3300035410 Bacteria 1890
129 Ga0373935_0015454 3300035692 Bacteria 4615
130 Ga0373935_0034648 3300035692 Bacteria 3148
131 Ga0373935_0035160 3300035692 Bacteria 3127
132 Ga0373927_0068558 3300035695 Bacteria 2295
133 Ga0373933_0007704 3300035724 Bacteria 5881
134 Ga0373933_0060717 3300035724 Bacteria 2279
135 Ga0373947_0077024 3300035725 Bacteria 2056
136 Ga0373947_0081166 3300035725 Bacteria 2007
137 Ga0373937_0000881 3300036401 Bacteria 25704
138 Ga0373937_0010078 3300036401 Bacteria 8239
139 Ga0373937_0078043 3300036401 Bacteria 3060
140 Ga0373937_0096056 3300036401 Bacteria 2748
141 Ga0373925_0027409 3300037068 Bacteria 4170
142 Ga0373925_0040955 3300037068 Bacteria 3431
143 Ga0373925_0115020 3300037068 Bacteria 2082
144 Ga0436364_0128168 3300037853 Bacteria 71580
145 Ga0436364_0630944 3300037853 Bacteria 60832
146 Ga0436364_0793835 3300037853 Bacteria 20178
147 Ga0436364_0853803 3300037853 Bacteria 2090
148 Ga0436364_0875927 3300037853 Bacteria 33532
149 Ga0436364_0936501 3300037853 Bacteria 40899
150 Ga0436365_0643711 3300039437 Bacteria 2534
151 Ga0436365_1058498 3300039437 Bacteria 1721
152 Ga0436360_0512780 3300039438 Bacteria 1995
153 Ga0436363_0124851 3300039450 Bacteria 2996
154 Ga0436363_0791301 3300039450 Bacteria 2803
155 Ga0436363_0896790 3300039450 Bacteria 1845
156 Ga0436363_0960967 3300039450 Unclassified 2315
157 Ga0436363_1030235 3300039450 Bacteria 1741
158 Ga0436362_1040669 3300039453 Bacteria 2069
159 Ga0495606_0006102 3300046507 Bacteria 11251
160 Ga0495618_0072810 3300046514 Bacteria 2187
161 Ga0495640_0030168 3300046533 Bacteria 3885
162 Ga0495640_0035106 3300046533 Bacteria 3551
163 Ga0495586_0031272 3300046535 Bacteria 2850
164 Ga0495667_0024347 3300046559 Bacteria 4077
165 Ga0495635_0023286 3300046663 Bacteria 4317
166 Ga0495635_0031057 3300046663 Bacteria 3711
167 Ga0495680_0032362 3300047322 Bacteria 4246
168 Ga0496110_0089342 3300048913 Bacteria 2754
169 Ga0496112_0000101 3300048915 Bacteria 54429
170 Ga0496112_0008264 3300048915 Bacteria 9314
171 Ga0496112_0077543 3300048915 Bacteria 3286
172 Ga0496112_0105745 3300048915 Bacteria 2784
173 Ga0496113_0011958 3300048916 Bacteria 5818
174 Ga0496113_0085825 3300048916 Bacteria 2418
175 Ga0501047_0179167 3300049581 Bacteria 1986
176 nmdc:mga05p37_138_c1 3300050507 Bacteria 67838
177 nmdc:mga09592_3687_c1 3300050508 Bacteria 12351
178 nmdc:mga09592_86500_c1 3300050508 Bacteria 2675
179 nmdc:mga0qj67_17589_c1 3300050509 Bacteria 5437
180 nmdc:mga06r32_2508_c1 3300050510 Bacteria 16424
181 nmdc:mga06r32_9897_c1 3300050510 Bacteria 8604
182 nmdc:mga08y16_213_c1 3300050511 Bacteria 51950
183 nmdc:mga08y16_66471_c1 3300050511 Bacteria 3762
184 nmdc:mga0rr50_194234_c1 3300050513 Bacteria 1665
185 nmdc:mga08x19_19553_c1 3300050514 Bacteria 4158
186 Ga0495601_0004066 3300053077 Bacteria 8435
187 Ga0495619_0001729 3300053085 Bacteria 14480
188 Ga0495619_0016437 3300053085 Bacteria 4684
189 Ga0495619_0040097 3300053085 Unclassified 3060
190 Ga0500552_001019 3300053733 Bacteria 2647
191 Ga0373954_0006040
192 JGI25406J46586_10000010
193 Ga0070683_100138496
194 Ga0070670_100033707
195 Ga0070671_100003213
196 Ga0070671_100008406
197 Ga0070671_100026424
198 Ga0070671_100181549
199 Ga0070709_10034301
200 Ga0070709_10037360
201 Ga0070709_10042170
202 Ga0070709_10057128
203 Ga0070714_100049326
204 Ga0070714_100059722
205 Ga0070714_100136224
206 Ga0070713_100009882
207 Ga0070713_100041591
208 Ga0070713_100133804
209 Ga0070710_10010774
210 Ga0070710_10044740
211 Ga0070711_100036713
212 Ga0070681_10040602
213 Ga0070681_10120983
214 Ga0070706_100027265
215 Ga0070706_100032939
216 Ga0070706_100046997
217 Ga0070706_100051946
218 Ga0070706_100062468
219 Ga0070707_100005179
220 Ga0070707_100031790
221 Ga0070707_100129643
222 Ga0070707_100141114
223 Ga0070698_100003768
224 Ga0070698_100054593
225 Ga0070698_100137583
226 Ga0070684_100083123
227 Ga0070697_100108333
228 Ga0068856_100128951
229 Ga0068860_100201730
230 Ga0081540_1005085
231 Ga0081540_1007917
232 Ga0081540_1008190
233 Ga0081540_1008231
234 Ga0070717_10005557
235 Ga0070717_10011384
236 Ga0070717_10104233
237 Ga0070717_10139187
238 Ga0070716_100082643
239 Ga0070712_100020833
240 Ga0075428_100004129
241 Ga0075430_100012920
242 Ga0075431_100002871
243 Ga0075429_100003443
244 Ga0075436_100043660
245 Ga0075436_100073937
246 Ga0075436_100078006
247 Ga0099795_10001249
248 Ga0099795_10001256
249 Ga0099795_10003659
250 Ga0099795_10023410
251 Ga0099795_10026113
252 Ga0111539_10010264
253 Ga0114129_10000046
254 Ga0099796_10003985
255 Ga0099796_10005525
256 Ga0099796_10008341
257 Ga0105239_10182117
258 Ga0157370_10057890
259 Ga0157375_10143742
260 Ga0182008_10009553
261 Ga0182008_10023147
262 Ga0182008_10042262
263 Ga0157376_10131676
264 Ga0213875_10000261
265 Ga0213875_10000490
266 Ga0213875_10000847
267 Ga0213875_10002556
268 Ga0213875_10003252
269 Ga0207680_10072867
270 Ga0207699_10011509
271 Ga0207699_10020678
272 Ga0207699_10033106
273 Ga0207684_10026115
274 Ga0207684_10041587
275 Ga0207684_10059297
276 Ga0207684_10085313
277 Ga0207684_10107715
278 Ga0207707_10029556
279 Ga0207693_10005112
280 Ga0207693_10005495
281 Ga0207693_10013106
282 Ga0207693_10023885
283 Ga0207663_10013856
284 Ga0207663_10046537
285 Ga0207652_10042024
286 Ga0207652_10087380
287 Ga0207646_10006727
288 Ga0207646_10024927
289 Ga0207646_10034235
290 Ga0207646_10086663
291 Ga0207646_10105785
292 Ga0207659_10127204
293 Ga0207700_10012896
294 Ga0207700_10024739
295 Ga0207700_10072852
296 Ga0207700_10148265
297 Ga0207664_10101982
298 Ga0207664_10178629
299 Ga0207644_10053335
300 Ga0207665_10040883
301 Ga0207665_10050470
302 Ga0207665_10059182
303 Ga0207661_10111484
304 Ga0207703_10176087
305 Ga0207703_10217467
306 Ga0207702_10034320
307 Ga0207702_10122023
308 Ga0207702_10131767
309 Ga0207702_10149858
310 Ga0209179_1000399
311 Ga0209179_1007686
312 Ga0265325_10054093
313 Ga0373926_0004816
314 Ga0373954_0012195
315 Ga0373957_0018383
316 Ga0373943_0038895
317 Ga0373955_0004955
318 Ga0373924_0041287
319 Ga0373935_0015454
320 Ga0373935_0034648
321 Ga0373935_0035160
322 Ga0373927_0068558
323 Ga0373933_0007704
324 Ga0373933_0060717
325 Ga0373947_0077024
326 Ga0373947_0081166
327 Ga0373937_0000881
328 Ga0373937_0010078
329 Ga0373937_0078043
330 Ga0373937_0096056
331 Ga0373925_0027409
332 Ga0373925_0040955
333 Ga0373925_0115020
334 Ga0436364_0128168
335 Ga0436364_0630944
336 Ga0436364_0793835
337 Ga0436364_0853803
338 Ga0436364_0875927
339 Ga0436364_0936501
340 Ga0436365_0643711
341 Ga0436365_1058498
342 Ga0436360_0512780
343 Ga0436363_0124851
344 Ga0436363_0791301
345 Ga0436363_0896790
346 Ga0436363_0960967
347 Ga0436363_1030235
348 Ga0436362_1040669
349 Ga0495606_0006102
350 Ga0495618_0072810
351 Ga0495640_0030168
352 Ga0495640_0035106
353 Ga0495586_0031272
354 Ga0495667_0024347
355 Ga0495635_0023286
356 Ga0495635_0031057
357 Ga0495680_0032362
358 Ga0496110_0089342
359 Ga0496112_0000101
360 Ga0496112_0008264
361 Ga0496112_0077543
362 Ga0496112_0105745
363 Ga0496113_0011958
364 Ga0496113_0085825
365 Ga0501047_0179167
366 nmdc:mga05p37_138_c1
367 nmdc:mga09592_3687_c1
368 nmdc:mga09592_86500_c1
369 nmdc:mga0qj67_17589_c1
370 nmdc:mga06r32_2508_c1
371 nmdc:mga06r32_9897_c1
372 nmdc:mga08y16_213_c1
373 nmdc:mga08y16_66471_c1
374 nmdc:mga0rr50_194234_c1
375 nmdc:mga08x19_19553_c1
376 Ga0495601_0004066
377 Ga0495619_0001729
378 Ga0495619_0016437
379 Ga0495619_0040097
380 Ga0500552_001019

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00496

SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

123

494

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6tfs-assembly2.cif.gz_B structure in p3212 form of the pbp/sbp moaa in complex with glucopinic acid from a.tumefacien r10 0.8945 26 531
7kz9-assembly2.cif.gz_B crystal structure of pseudomonas sp. pdc86 substrate-binding protein aapf in complex with a signaling molecule heheaa 0.8935 30 527
6tfs-assembly2.cif.gz_B structure in p3212 form of the pbp/sbp moaa in complex with glucopinic acid from a.tumefacien r10 0.8911 26 531
6dqu-assembly1.cif.gz_A crystal structure of haemophilus influenzae oppa complex with giintl 0.8851 26 531
7kz9-assembly2.cif.gz_B crystal structure of pseudomonas sp. pdc86 substrate-binding protein aapf in complex with a signaling molecule heheaa 0.8846 30 527
ID Description Score Start End Superfamily
1uqwB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9114 196 252 3.40.190.10
4tozB03 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.8947 280 498 3.10.105.10
1uqwB02 Alpha Beta;Alpha-Beta Complex;Dipeptide-binding Protein; domain 1;Dipeptide-binding Protein; Domain 1 0.8924 41 194 3.90.76.10
af_P75797_27_224_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.8901 30 232 3.10.105.10
1b52A03 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.8867 280 497 3.10.105.10
ID Description Score Start End GO Terms
AF-A0A2V6PAU6-F1-model_v4 Peptide ABC transporter substrate-binding protein 0.9802 26 202 GO:0015833
GO:1904680
AF-A0A534N3L4-F1-model_v4 Solute-binding protein family 5 domain-containing protein 0.9349 137 363 GO:0015833
GO:1904680
AF-A0A537R6Q0-F1-model_v4 ABC transporter substrate-binding protein 0.9335 24 526 GO:0015031
GO:0015833
GO:0030288
GO:0043190
GO:1904680
AF-A0A2V7C996-F1-model_v4 ABC transporter substrate-binding protein 0.9323 204 531 GO:0015833
GO:1904680
AF-A0A2V7C996-F1-model_v4 ABC transporter substrate-binding protein 0.9268 204 531 GO:0015833
GO:1904680

Map