F304197

General Info

Members Datasets Scaffolds Average Seq Length
198 122 198 349

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10082308|Ga0081455_100823083
Length 374
Sequence MSADPATSTTPQRELDAARTGDEDAYRGLVEPHRSELRAHCYRMLGSVDDAEDALQEALLRAWRGLSGFEGRSSLRSWLYRIATNTCLDAIARRPKRVLPVDYGPATDPHDGPGEPVVESVWMEPYPDERLEVEDGYAAPDARYEQREGVELAFIAALQHLPANQRAVLILREVLAFSAREVAEALQTTVAAVNSALQRARKAVEERLPAQSQQATLRTLGDEGLRDVVDGYVDAWDRGDIDAVVAMLTEDAAFSMPPLASWFGGPEGGHEELRAFLTLGPLSGEWRWRHLPVNASGQPALAFYSWDARERTHLPFALNVFTLRDRRISDVTAFVCRSIERPDRAAYARWPDQPADPGRLNAYFVRFGLPERVD

Samples

Sample ID Description Type Environment
1 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
77 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
78 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
79 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
80 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
81 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
85 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
102 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
103 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
106 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
107 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
108 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
116 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
119 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
120 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.52
Nodule 0
Rhizoplane 5.05
Rhizosphere 92.42
Stem 0
Stem Tuber 0
Unclassified 1.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24743J22301_10010183 3300001991 Bacteria 1675
2 JGI25407J50210_10025117 3300003373 Bacteria 1545
3 Ga0070683_100011182 3300005329 Bacteria 7743
4 Ga0070683_100044797 3300005329 Bacteria 4081
5 Ga0070683_100173240 3300005329 Bacteria 2048
6 Ga0070690_100074131 3300005330 Bacteria 2216
7 Ga0068869_100044291 3300005334 Bacteria 3200
8 Ga0070687_100112366 3300005343 Bacteria 1544
9 Ga0070668_100003038 3300005347 Bacteria 12416
10 Ga0070675_100081657 3300005354 Bacteria 2696
11 Ga0070673_100212403 3300005364 Bacteria 1672
12 Ga0070700_100001678 3300005441 Bacteria 11099
13 Ga0070663_100016599 3300005455 Bacteria 4788
14 Ga0070678_100101288 3300005456 Bacteria 2233
15 Ga0070698_100082871 3300005471 Bacteria 3198
16 Ga0070699_100002923 3300005518 Bacteria 15192
17 Ga0070684_100005918 3300005535 Bacteria 9415
18 Ga0070704_100149445 3300005549 Bacteria 1835
19 Ga0070664_100011157 3300005564 Bacteria 7288
20 Ga0068856_100007320 3300005614 Bacteria 10771
21 Ga0070702_100003296 3300005615 Bacteria 7198
22 Ga0068859_100211682 3300005617 Bacteria 2025
23 Ga0068864_100000262 3300005618 Bacteria 47006
24 Ga0068864_100012991 3300005618 Bacteria 6893
25 Ga0068863_100012378 3300005841 Bacteria 8239
26 Ga0068858_100110843 3300005842 Bacteria 2562
27 Ga0068860_100434769 3300005843 Bacteria 1303
28 Ga0068862_100034245 3300005844 Bacteria 4296
29 Ga0081455_10033407 3300005937 Bacteria 4623
30 Ga0081455_10034286 3300005937 Bacteria 4550
31 Ga0081455_10034675 3300005937 Bacteria 4519
32 Ga0081455_10082308 3300005937 Bacteria 2633
33 Ga0081455_10106298 3300005937 Bacteria 2240
34 Ga0081538_10000110 3300005981 Bacteria 81874
35 Ga0081538_10000341 3300005981 Bacteria 53130
36 Ga0081538_10001194 3300005981 Bacteria 27359
37 Ga0081538_10009134 3300005981 Bacteria 8314
38 Ga0081538_10102949 3300005981 Bacteria 1430
39 Ga0081539_10023057 3300005985 Bacteria 4090
40 Ga0075365_10013858 3300006038 Bacteria 4836
41 Ga0097620_100211674 3300006931 Bacteria 2025
42 Ga0105245_10001972 3300009098 Bacteria 18632
43 Ga0114129_10080218 3300009147 Bacteria 4536
44 Ga0105243_10056427 3300009148 Bacteria 3123
45 Ga0105249_10036263 3300009553 Bacteria 4474
46 Ga0105249_10105846 3300009553 Bacteria 2653
47 Ga0105239_10057717 3300010375 Bacteria 4258
48 Ga0105246_10238922 3300011119 Bacteria 1435
49 Ga0157374_10007759 3300013296 Bacteria 9159
50 Ga0157372_10472870 3300013307 Bacteria 1461
51 Ga0157375_10051160 3300013308 Bacteria 4056
52 Ga0163163_10015789 3300014325 Bacteria 6993
53 Ga0163163_10442550 3300014325 Bacteria 1359
54 Ga0157377_10004873 3300014745 Bacteria 6242
55 Ga0157379_10002921 3300014968 Bacteria 14440
56 Ga0213875_10089154 3300021388 Bacteria 1439
57 Ga0207688_10002988 3300025901 Bacteria 9204
58 Ga0207684_10251951 3300025910 Bacteria 1523
59 Ga0207693_10099468 3300025915 Bacteria 2280
60 Ga0207649_10083289 3300025920 Bacteria 2076
61 Ga0207646_10008171 3300025922 Bacteria 10521
62 Ga0207687_10042410 3300025927 Bacteria 3130
63 Ga0207644_10285589 3300025931 Bacteria 1326
64 Ga0207711_10174509 3300025941 Bacteria 1952
65 Ga0207689_10060056 3300025942 Bacteria 3127
66 Ga0207661_10014466 3300025944 Bacteria 5785
67 Ga0207679_10006468 3300025945 Bacteria 7409
68 Ga0207679_10071655 3300025945 Bacteria 2615
69 Ga0207678_10049081 3300026067 Bacteria 3647
70 Ga0207708_10038299 3300026075 Bacteria 3653
71 Ga0207702_10132085 3300026078 Bacteria 2248
72 Ga0207641_10004843 3300026088 Bacteria 11595
73 Ga0207676_10000038 3300026095 Bacteria 171492
74 Ga0207683_10111916 3300026121 Bacteria 2445
75 Ga0268265_10010800 3300028380 Bacteria 6166
76 Ga0307405_10012000 3300031731 Bacteria 4566
77 Ga0307406_10079745 3300031901 Bacteria 2172
78 Ga0307416_100001017 3300032002 Bacteria 14869
79 Ga0307416_100446264 3300032002 Bacteria 1345
80 Ga0307415_100000672 3300032126 Bacteria 15148
81 Ga0307415_100391473 3300032126 Bacteria 1183
82 Ga0395900_0102206 3300037418 Bacteria 2945
83 Ga0395900_0456405 3300037418 Bacteria 1233
84 Ga0395898_0098324 3300037466 Bacteria 2810
85 Ga0395898_0145530 3300037466 Bacteria 2268
86 Ga0395905_0122004 3300037471 Bacteria 2450
87 Ga0395905_0435501 3300037471 Bacteria 1208
88 Ga0436364_1429724 3300037853 Bacteria 1561
89 Ga0395901_0028178 3300038443 Bacteria 5778
90 Ga0395901_0269756 3300038443 Bacteria 1770
91 Ga0466963_0170797 3300044694 Bacteria 1516
92 Ga0466964_0036294 3300044706 Bacteria 1976
93 Ga0466964_0082666 3300044706 Bacteria 1382
94 Ga0466960_0012355 3300044901 Bacteria 3601
95 Ga0466967_0002314 3300045976 Bacteria 11776
96 Ga0466967_0087011 3300045976 Bacteria 2832
97 Ga0466967_0101130 3300045976 Bacteria 2634
98 Ga0495628_0000093 3300046516 Bacteria 71181
99 Ga0495621_0110940 3300046539 Bacteria 1052
100 Ga0495646_0143073 3300046680 Bacteria 1336
101 Ga0495680_0111336 3300047322 Bacteria 2028
102 Ga0495593_0006302 3300047673 Bacteria 6959
103 Ga0495602_0000474 3300048088 Bacteria 37136
104 Ga0496100_0177804 3300048903 Bacteria 1537
105 Ga0496100_0263759 3300048903 Bacteria 1278
106 Ga0496104_0184440 3300048907 Bacteria 1997
107 Ga0496105_0041460 3300048908 Bacteria 3794
108 Ga0496106_0010919 3300048909 Bacteria 6713
109 Ga0496106_0273089 3300048909 Bacteria 1354
110 Ga0496110_0080428 3300048913 Bacteria 2904
111 Ga0496110_0319767 3300048913 Bacteria 1413
112 Ga0496111_0153094 3300048914 Bacteria 1711
113 Ga0496113_0307381 3300048916 Bacteria 1270
114 Ga0501031_0056851 3300049568 Bacteria 2549
115 Ga0501031_0103386 3300049568 Bacteria 1859
116 Ga0501032_0233083 3300049569 Bacteria 1197
117 Ga0501033_0274344 3300049570 Bacteria 1191
118 Ga0501034_0410193 3300049571 Bacteria 1277
119 Ga0501036_0004431 3300049572 Bacteria 11344
120 Ga0501036_0021957 3300049572 Bacteria 5367
121 Ga0501038_0029227 3300049574 Bacteria 4887
122 Ga0501038_0043556 3300049574 Bacteria 3902
123 Ga0501038_0077224 3300049574 Bacteria 2812
124 Ga0501039_0001663 3300049575 Bacteria 16376
125 Ga0501039_0011499 3300049575 Bacteria 6736
126 Ga0501039_0027792 3300049575 Bacteria 4350
127 Ga0501040_0001798 3300049576 Bacteria 13780
128 Ga0501040_0012250 3300049576 Bacteria 5617
129 Ga0501040_0059115 3300049576 Bacteria 2634
130 Ga0501040_0136674 3300049576 Bacteria 1726
131 Ga0501041_0012701 3300049577 Bacteria 4990
132 Ga0501041_0019710 3300049577 Bacteria 4030
133 Ga0501041_0034891 3300049577 Bacteria 3047
134 Ga0501041_0058373 3300049577 Bacteria 2360
135 Ga0501041_0104937 3300049577 Bacteria 1751
136 Ga0501042_0009502 3300049578 Bacteria 6483
137 Ga0501042_0034957 3300049578 Bacteria 3565
138 Ga0501042_0037775 3300049578 Bacteria 3427
139 Ga0501043_0057163 3300049579 Bacteria 3064
140 Ga0501046_0023528 3300049580 Bacteria 5066
141 Ga0501046_0072808 3300049580 Bacteria 2667
142 Ga0501046_0177559 3300049580 Bacteria 1594
143 Ga0501048_0009283 3300049582 Bacteria 7388
144 Ga0501048_0013257 3300049582 Bacteria 6117
145 Ga0501048_0086576 3300049582 Bacteria 2210
146 Ga0501048_0193685 3300049582 Bacteria 1440
147 Ga0501068_0086810 3300049584 Bacteria 1926
148 Ga0501068_0087257 3300049584 Bacteria 1921
149 Ga0501069_0018770 3300049585 Bacteria 3735
150 Ga0501071_0010885 3300049587 Bacteria 6104
151 Ga0501071_0028271 3300049587 Bacteria 3951
152 Ga0501072_0000312 3300049588 Bacteria 34544
153 Ga0501072_0006058 3300049588 Bacteria 9229
154 Ga0501072_0008715 3300049588 Bacteria 7700
155 Ga0501072_0024542 3300049588 Bacteria 4691
156 Ga0501072_0193123 3300049588 Bacteria 1623
157 Ga0501074_0045933 3300049590 Bacteria 3159
158 Ga0501074_0219190 3300049590 Bacteria 1355
159 Ga0501075_0004044 3300049591 Bacteria 9895
160 Ga0501075_0008374 3300049591 Bacteria 7212
161 Ga0501075_0052570 3300049591 Bacteria 3063
162 Ga0501076_0013469 3300049592 Bacteria 6135
163 Ga0501076_0017514 3300049592 Bacteria 5446
164 Ga0501076_0097713 3300049592 Bacteria 2365
165 Ga0501076_0257032 3300049592 Bacteria 1430
166 Ga0501077_0002941 3300049593 Bacteria 10224
167 Ga0501077_0005971 3300049593 Bacteria 7438
168 Ga0501077_0007127 3300049593 Bacteria 6892
169 Ga0501077_0028595 3300049593 Bacteria 3544
170 Ga0501079_0004141 3300049741 Bacteria 10736
171 Ga0501079_0009778 3300049741 Bacteria 7271
172 Ga0501079_0070565 3300049741 Bacteria 2698
173 Ga0501080_0026405 3300049742 Bacteria 5397
174 Ga0501080_0186474 3300049742 Bacteria 1907
175 Ga0501081_0001913 3300049743 Bacteria 12922
176 Ga0501081_0067731 3300049743 Bacteria 2485
177 Ga0501083_0037528 3300049744 Bacteria 3300
178 Ga0501083_0061821 3300049744 Bacteria 2500
179 Ga0501035_0024186 3300049822 Bacteria 5572
180 Ga0501045_0004662 3300049824 Bacteria 9468
181 Ga0501045_0176403 3300049824 Bacteria 1592
182 nmdc:mga00v17_10324_c1 3300050491 Bacteria 5093
183 nmdc:mga0yw44_5430_c1 3300050492 Bacteria 6022
184 nmdc:mga05p37_517362_c1 3300050507 Bacteria 1366
185 nmdc:mga08y16_379495_c1 3300050511 Bacteria 1449
186 nmdc:mga0rr50_144535_c1 3300050513 Bacteria 1916
187 Ga0501084_0003236 3300054114 Bacteria 13187
188 Ga0501084_0004066 3300054114 Bacteria 11913
189 Ga0501084_0033704 3300054114 Bacteria 4284
190 Ga0501084_0037321 3300054114 Bacteria 4059
191 Ga0501084_0089301 3300054114 Bacteria 2587
192 Ga0501084_0177841 3300054114 Bacteria 1796
193 Ga0501082_0002699 3300060353 Bacteria 15502
194 Ga0501082_0011810 3300060353 Bacteria 7509
195 Ga0501082_0100697 3300060353 Bacteria 2499
196 Ga0501082_0166873 3300060353 Bacteria 1913
197 Ga0530510_0016210 3300061734 Bacteria 5269
198 Ga0530510_0016254 3300061734 Bacteria 5262

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049590 Ga0501074_0219190 Ga0501074_0219190_15_863 280
2 3300049570 Ga0501033_0274344 Ga0501033_0274344_249_1145 295
3 3300049584 Ga0501068_0087257 Ga0501068_0087257_957_1853 295
4 3300046539 Ga0495621_0110940 Ga0495621_0110940_52_1038 301
5 3300050513 nmdc:mga0rr50_144535_c1 nmdc:mga0rr50_144535_c1_57_1040 301
6 3300046680 Ga0495646_0143073 Ga0495646_0143073_12_926 302
7 3300047322 Ga0495680_0111336 Ga0495680_0111336_21_935 302
8 3300047673 Ga0495593_0006302 Ga0495593_0006302_6025_6939 302
9 3300044706 Ga0466964_0082666 Ga0466964_0082666_280_1263 307
10 3300045976 Ga0466967_0002314 Ga0466967_0002314_352_1335 307
11 3300032126 Ga0307415_100391473 Ga0307415_1003914732 309
12 3300049571 Ga0501034_0410193 Ga0501034_0410193_302_1237 309
13 3300031901 Ga0307406_10079745 Ga0307406_100797452 311
14 3300049568 Ga0501031_0103386 Ga0501031_0103386_20_961 311
15 3300049574 Ga0501038_0077224 Ga0501038_0077224_184_1125 311
16 3300049575 Ga0501039_0001663 Ga0501039_0001663_6932_7873 311
17 3300049577 Ga0501041_0034891 Ga0501041_0034891_1497_2438 311
18 3300049587 Ga0501071_0028271 Ga0501071_0028271_2455_3396 311
19 3300049588 Ga0501072_0193123 Ga0501072_0193123_135_1076 311
20 3300049591 Ga0501075_0052570 Ga0501075_0052570_2016_2957 311
21 3300049592 Ga0501076_0257032 Ga0501076_0257032_312_1253 311
22 3300049824 Ga0501045_0176403 Ga0501045_0176403_625_1566 311
23 3300054114 Ga0501084_0177841 Ga0501084_0177841_45_986 311
24 3300005347 Ga0070668_100003038 Ga0070668_1000030388 318
25 3300005844 Ga0068862_100034245 Ga0068862_1000342454 318
26 3300028380 Ga0268265_10010800 Ga0268265_100108005 318
27 3300037471 Ga0395905_0435501 Ga0395905_0435501_186_1151 319
28 3300005981 Ga0081538_10001194 Ga0081538_1000119428 321
29 3300025915 Ga0207693_10099468 Ga0207693_100994682 321
30 3300037466 Ga0395898_0098324 Ga0395898_0098324_880_1899 321
31 3300044694 Ga0466963_0170797 Ga0466963_0170797_310_1353 321
32 3300005937 Ga0081455_10034675 Ga0081455_100346754 327
33 3300031731 Ga0307405_10012000 Ga0307405_100120004 327
34 3300032002 Ga0307416_100001017 Ga0307416_1000010176 327
35 3300032126 Ga0307415_100000672 Ga0307415_10000067210 327
36 3300005937 Ga0081455_10034286 Ga0081455_100342863 328
37 3300025942 Ga0207689_10060056 Ga0207689_100600561 331
38 3300005549 Ga0070704_100149445 Ga0070704_1001494452 334
39 3300005518 Ga0070699_100002923 Ga0070699_1000029236 335
40 3300025922 Ga0207646_10008171 Ga0207646_100081718 335
41 3300005841 Ga0068863_100012378 Ga0068863_1000123787 336
42 3300026088 Ga0207641_10004843 Ga0207641_100048434 336
43 3300044706 Ga0466964_0036294 Ga0466964_0036294_445_1557 336
44 3300044901 Ga0466960_0012355 Ga0466960_0012355_1857_2969 336
45 3300045976 Ga0466967_0101130 Ga0466967_0101130_780_1892 336
46 3300005329 Ga0070683_100044797 Ga0070683_1000447972 337
47 3300014968 Ga0157379_10002921 Ga0157379_100029214 337
48 3300049577 Ga0501041_0019710 Ga0501041_0019710_1957_2979 337
49 3300049578 Ga0501042_0009502 Ga0501042_0009502_3653_4675 337
50 3300049580 Ga0501046_0177559 Ga0501046_0177559_500_1522 337
51 3300049582 Ga0501048_0193685 Ga0501048_0193685_47_1069 337
52 3300049584 Ga0501068_0086810 Ga0501068_0086810_630_1652 337
53 3300049588 Ga0501072_0008715 Ga0501072_0008715_1709_2731 337
54 3300049592 Ga0501076_0097713 Ga0501076_0097713_501_1523 337
55 3300049593 Ga0501077_0007127 Ga0501077_0007127_5661_6683 337
56 3300049741 Ga0501079_0004141 Ga0501079_0004141_2814_3836 337
57 3300049742 Ga0501080_0186474 Ga0501080_0186474_216_1238 337
58 3300049744 Ga0501083_0061821 Ga0501083_0061821_85_1107 337
59 3300054114 Ga0501084_0033704 Ga0501084_0033704_2239_3261 337
60 3300060353 Ga0501082_0166873 Ga0501082_0166873_879_1901 337
61 3300049568 Ga0501031_0056851 Ga0501031_0056851_559_1584 338
62 3300049569 Ga0501032_0233083 Ga0501032_0233083_94_1119 338
63 3300049572 Ga0501036_0021957 Ga0501036_0021957_2224_3249 338
64 3300049574 Ga0501038_0043556 Ga0501038_0043556_2331_3356 338
65 3300049575 Ga0501039_0011499 Ga0501039_0011499_2003_3028 338
66 3300049576 Ga0501040_0001798 Ga0501040_0001798_8154_9179 338
67 3300049577 Ga0501041_0012701 Ga0501041_0012701_977_2002 338
68 3300049578 Ga0501042_0034957 Ga0501042_0034957_1958_2983 338
69 3300049579 Ga0501043_0057163 Ga0501043_0057163_962_1987 338
70 3300049580 Ga0501046_0023528 Ga0501046_0023528_306_1331 338
71 3300049582 Ga0501048_0009283 Ga0501048_0009283_4518_5543 338
72 3300049585 Ga0501069_0018770 Ga0501069_0018770_267_1292 338
73 3300049588 Ga0501072_0000312 Ga0501072_0000312_14491_15516 338
74 3300049591 Ga0501075_0004044 Ga0501075_0004044_3761_4786 338
75 3300049592 Ga0501076_0017514 Ga0501076_0017514_3231_4256 338
76 3300049593 Ga0501077_0002941 Ga0501077_0002941_1848_2873 338
77 3300049741 Ga0501079_0009778 Ga0501079_0009778_2060_3085 338
78 3300049743 Ga0501081_0001913 Ga0501081_0001913_3160_4185 338
79 3300049822 Ga0501035_0024186 Ga0501035_0024186_1063_2088 338
80 3300049824 Ga0501045_0004662 Ga0501045_0004662_6206_7231 338
81 3300054114 Ga0501084_0004066 Ga0501084_0004066_4490_5515 338
82 3300060353 Ga0501082_0002699 Ga0501082_0002699_12489_13514 338
83 3300061734 Ga0530510_0016254 Ga0530510_0016254_2584_3609 338
84 3300049572 Ga0501036_0004431 Ga0501036_0004431_4490_5518 339
85 3300049574 Ga0501038_0029227 Ga0501038_0029227_2712_3740 339
86 3300049575 Ga0501039_0027792 Ga0501039_0027792_73_1101 339
87 3300049576 Ga0501040_0012250 Ga0501040_0012250_992_2020 339
88 3300049577 Ga0501041_0058373 Ga0501041_0058373_1133_2161 339
89 3300049578 Ga0501042_0037775 Ga0501042_0037775_2222_3250 339
90 3300049580 Ga0501046_0072808 Ga0501046_0072808_310_1338 339
91 3300049582 Ga0501048_0013257 Ga0501048_0013257_3746_4774 339
92 3300049588 Ga0501072_0006058 Ga0501072_0006058_3103_4131 339
93 3300049591 Ga0501075_0008374 Ga0501075_0008374_4495_5523 339
94 3300049592 Ga0501076_0013469 Ga0501076_0013469_1341_2369 339
95 3300049593 Ga0501077_0005971 Ga0501077_0005971_1486_2514 339
96 3300049742 Ga0501080_0026405 Ga0501080_0026405_2544_3572 339
97 3300049743 Ga0501081_0067731 Ga0501081_0067731_1046_2074 339
98 3300049744 Ga0501083_0037528 Ga0501083_0037528_1722_2750 339
99 3300054114 Ga0501084_0003236 Ga0501084_0003236_9524_10552 339
100 3300060353 Ga0501082_0011810 Ga0501082_0011810_3832_4860 339
101 3300061734 Ga0530510_0016210 Ga0530510_0016210_3373_4401 339
102 3300005329 Ga0070683_100011182 Ga0070683_1000111827 340
103 3300005334 Ga0068869_100044291 Ga0068869_1000442914 340
104 3300005343 Ga0070687_100112366 Ga0070687_1001123661 340
105 3300005354 Ga0070675_100081657 Ga0070675_1000816572 340
106 3300005364 Ga0070673_100212403 Ga0070673_1002124031 340
107 3300005441 Ga0070700_100001678 Ga0070700_1000016789 340
108 3300005455 Ga0070663_100016599 Ga0070663_1000165992 340
109 3300005456 Ga0070678_100101288 Ga0070678_1001012882 340
110 3300005471 Ga0070698_100082871 Ga0070698_1000828714 340
111 3300005535 Ga0070684_100005918 Ga0070684_1000059189 340
112 3300005564 Ga0070664_100011157 Ga0070664_1000111574 340
113 3300005614 Ga0068856_100007320 Ga0068856_10000732012 340
114 3300005615 Ga0070702_100003296 Ga0070702_1000032964 340
115 3300005617 Ga0068859_100211682 Ga0068859_1002116822 340
116 3300005618 Ga0068864_100012991 Ga0068864_1000129917 340
117 3300005843 Ga0068860_100434769 Ga0068860_1004347691 340
118 3300006931 Ga0097620_100211674 Ga0097620_1002116742 340
119 3300009098 Ga0105245_10001972 Ga0105245_100019728 340
120 3300009148 Ga0105243_10056427 Ga0105243_100564272 340
121 3300010375 Ga0105239_10057717 Ga0105239_100577174 340
122 3300011119 Ga0105246_10238922 Ga0105246_102389222 340
123 3300013296 Ga0157374_10007759 Ga0157374_100077594 340
124 3300013308 Ga0157375_10051160 Ga0157375_100511601 340
125 3300014325 Ga0163163_10015789 Ga0163163_100157894 340
126 3300014745 Ga0157377_10004873 Ga0157377_100048736 340
127 3300025901 Ga0207688_10002988 Ga0207688_100029882 340
128 3300025927 Ga0207687_10042410 Ga0207687_100424102 340
129 3300025941 Ga0207711_10174509 Ga0207711_101745092 340
130 3300025944 Ga0207661_10014466 Ga0207661_100144666 340
131 3300025945 Ga0207679_10006468 Ga0207679_100064684 340
132 3300026067 Ga0207678_10049081 Ga0207678_100490813 340
133 3300026075 Ga0207708_10038299 Ga0207708_100382993 340
134 3300026121 Ga0207683_10111916 Ga0207683_101119162 340
135 3300032002 Ga0307416_100446264 Ga0307416_1004462642 340
136 3300048903 Ga0496100_0177804 Ga0496100_0177804_313_1410 340
137 3300048908 Ga0496105_0041460 Ga0496105_0041460_1665_2762 340
138 3300048909 Ga0496106_0010919 Ga0496106_0010919_3816_4913 340
139 3300049576 Ga0501040_0136674 Ga0501040_0136674_499_1554 340
140 3300054114 Ga0501084_0089301 Ga0501084_0089301_44_1099 340
141 3300005329 Ga0070683_100173240 Ga0070683_1001732402 341
142 3300013307 Ga0157372_10472870 Ga0157372_104728702 341
143 3300025920 Ga0207649_10083289 Ga0207649_100832892 341
144 3300025945 Ga0207679_10071655 Ga0207679_100716554 341
145 3300048913 Ga0496110_0080428 Ga0496110_0080428_590_1693 341
146 3300048916 Ga0496113_0307381 Ga0496113_0307381_80_1183 341
147 3300049576 Ga0501040_0059115 Ga0501040_0059115_1475_2509 341
148 3300003373 JGI25407J50210_10025117 JGI25407J50210_100251172 342
149 3300005981 Ga0081538_10000341 Ga0081538_1000034146 342
150 3300005937 Ga0081455_10033407 Ga0081455_100334073 343
151 3300021388 Ga0213875_10089154 Ga0213875_100891542 343
152 3300037418 Ga0395900_0102206 Ga0395900_0102206_1564_2673 343
153 3300037853 Ga0436364_1429724 Ga0436364_1429724_134_1243 343
154 3300038443 Ga0395901_0028178 Ga0395901_0028178_2765_3874 343
155 3300038443 Ga0395901_0269756 Ga0395901_0269756_346_1455 343
156 3300005618 Ga0068864_100000262 Ga0068864_10000026239 344
157 3300005937 Ga0081455_10082308 Ga0081455_100823083 344
158 3300005937 Ga0081455_10106298 Ga0081455_101062982 344
159 3300005981 Ga0081538_10009134 Ga0081538_100091344 344
160 3300006038 Ga0075365_10013858 Ga0075365_100138586 344
161 3300009553 Ga0105249_10105846 Ga0105249_101058462 344
162 3300025910 Ga0207684_10251951 Ga0207684_102519512 344
163 3300026095 Ga0207676_10000038 Ga0207676_1000003839 344
164 3300048909 Ga0496106_0273089 Ga0496106_0273089_127_1239 344
165 3300048914 Ga0496111_0153094 Ga0496111_0153094_355_1467 344
166 3300050491 nmdc:mga00v17_10324_c1 nmdc:mga00v17_10324_c1_168_1280 344
167 3300050492 nmdc:mga0yw44_5430_c1 nmdc:mga0yw44_5430_c1_1196_2308 344
168 3300005985 Ga0081539_10023057 Ga0081539_100230573 345
169 3300009147 Ga0114129_10080218 Ga0114129_100802184 345
170 3300009553 Ga0105249_10036263 Ga0105249_100362633 345
171 3300037418 Ga0395900_0456405 Ga0395900_0456405_96_1163 345
172 3300037466 Ga0395898_0145530 Ga0395898_0145530_1160_2227 345
173 3300037471 Ga0395905_0122004 Ga0395905_0122004_969_2036 345
174 3300046516 Ga0495628_0000093 Ga0495628_0000093_21810_22925 345
175 3300048088 Ga0495602_0000474 Ga0495602_0000474_4967_6082 345
176 3300049577 Ga0501041_0104937 Ga0501041_0104937_391_1506 345
177 3300049582 Ga0501048_0086576 Ga0501048_0086576_1058_2173 345
178 3300049587 Ga0501071_0010885 Ga0501071_0010885_219_1334 345
179 3300049588 Ga0501072_0024542 Ga0501072_0024542_3566_4681 345
180 3300049590 Ga0501074_0045933 Ga0501074_0045933_462_1577 345
181 3300049593 Ga0501077_0028595 Ga0501077_0028595_1661_2776 345
182 3300049741 Ga0501079_0070565 Ga0501079_0070565_85_1200 345
183 3300050507 nmdc:mga05p37_517362_c1 nmdc:mga05p37_517362_c1_216_1331 345
184 3300050511 nmdc:mga08y16_379495_c1 nmdc:mga08y16_379495_c1_200_1315 345
185 3300054114 Ga0501084_0037321 Ga0501084_0037321_2196_3311 345
186 3300060353 Ga0501082_0100697 Ga0501082_0100697_605_1720 345
187 3300005981 Ga0081538_10000110 Ga0081538_1000011084 346
188 3300005981 Ga0081538_10102949 Ga0081538_101029491 346
189 3300045976 Ga0466967_0087011 Ga0466967_0087011_977_2092 346
190 3300001991 JGI24743J22301_10010183 JGI24743J22301_100101832 355
191 3300005330 Ga0070690_100074131 Ga0070690_1000741312 355
192 3300005842 Ga0068858_100110843 Ga0068858_1001108432 355
193 3300014325 Ga0163163_10442550 Ga0163163_104425502 355
194 3300025931 Ga0207644_10285589 Ga0207644_102855891 355
195 3300026078 Ga0207702_10132085 Ga0207702_101320853 355
196 3300048903 Ga0496100_0263759 Ga0496100_0263759_17_1084 355
197 3300048907 Ga0496104_0184440 Ga0496104_0184440_673_1740 355
198 3300048913 Ga0496110_0319767 Ga0496110_0319767_142_1209 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04542

Sigma70_r2

Sigma-70 region 2

29

97

0.97

PF08281

Sigma70_r4_2

Sigma-70, region 4

151

204

0.96

PF12680

SnoaL_2

SnoaL-like domain

229

331

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fgm-assembly1.cif.gz_A streptomyces coelicolor sigr region 4 0.9795 169 214
4lup-assembly2.cif.gz_C crystal structure of the complex formed by region of e. coli sigmae bound to its -10 element non template strand 0.9397 18 101
5or5-assembly1.cif.gz_A nmr structure of the complex formed by an engineered region 2 of sigmae in complex with gtaaaa 0.9192 18 101
6jhe-assembly1.cif.gz_A crystal structure of bacillus subtilis sigw domain 4 in complexed with -35 element dna 0.9148 169 218
1ku3-assembly1.cif.gz_A crystal structure of thermus aquaticus rna polymerase sigma subunit fragment, region 4 0.8994 168 213
ID Description Score Start End Superfamily
4lupA00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9401 18 101 1.10.1740.10
4lupC00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9398 18 101 1.10.1740.10
af_P9WGG5_46_131_1.10.1740.10 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9394 26 102 1.10.1740.10
4l5jA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9199 172 211 1.10.10.10
5or5A00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9192 18 101 1.10.1740.10
ID Description Score Start End GO Terms
AF-V8D1C1-F1-model_v4 RNA polymerase sigma factor 0.9834 18 100 GO:0006352
GO:0016987
AF-A0A538RAN0-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.9744 17 100 GO:0006352
GO:0016987
AF-A0A4Q3W7Y0-F1-model_v4 RNA polymerase sigma factor 0.9724 18 100 GO:0006352
GO:0016987
AF-A0A351FI33-F1-model_v4 RNA polymerase sigma-70 region 2 domain-containing protein 0.9663 18 100 GO:0006352
GO:0016987
AF-A0A845DMI2-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.9625 16 100 GO:0006352
GO:0016987

Feature Viewer

pLDDT pTM Quality
81.08 0.73 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map