F304093

General Info

Members Datasets Scaffolds Average Seq Length
198 141 196 241

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100099699|Ga0070706_1000996992
Length 271
Sequence MDSVIEPSQRTHVLKGLAGRAVVVTGGAAGIGRVTAKRFASEGARVAIWDLSEKAGSEAAEEISSAGGEALFARVDVTDAAAVERGFDEVVQRFDGLGALINNAGILADAQLVQVRDGVVSGQMEEDVFDRVVSVNLKGVFLCGRAGAARMIKRGGGVILNASSVVGLYGNFGQTNYVATKAGVIGMTKTWARELGQYGIRVNAVAPGFIATEMVRGMPEKIKAAMVSRTPLRRLGEPEEVAAAYAWLASDEASFVTGAVLSVDGGIVVGT

Samples

Sample ID Description Type Environment
1 3300003161 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_8 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
2 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
101 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
105 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
106 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
112 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
139 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
140 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
141 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.98
Metatranscriptomes 1.01
Isolates 1.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.02
Nodule 0
Rhizoplane 5.56
Rhizosphere 90.4
Stem 0
Stem Tuber 0
Unclassified 2.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006765J45826_111658 3300003161 Unclassified 949
2 Ga0006759J45824_1109123 3300003163 Unclassified 1272
3 JGI25151J46595_10007387 3300003187 Bacteria 5391
4 rootH1_10011971 3300003316 Bacteria 1314
5 rootL2_10000804 3300003322 Bacteria 38622
6 Ga0070666_10137868 3300005335 Bacteria 1698
7 Ga0068868_100001237 3300005338 Bacteria 17544
8 Ga0070671_100210957 3300005355 Bacteria 1647
9 Ga0070703_10124724 3300005406 Bacteria 938
10 Ga0070714_100485149 3300005435 Bacteria 1177
11 Ga0070713_100104079 3300005436 Bacteria 2464
12 Ga0070705_100011602 3300005440 Bacteria 4452
13 Ga0070705_100312969 3300005440 Bacteria 1130
14 Ga0070708_100014351 3300005445 Bacteria 6516
15 Ga0070708_100142980 3300005445 Bacteria 2220
16 Ga0070708_100407347 3300005445 Bacteria 1282
17 Ga0070708_100453060 3300005445 Bacteria 1210
18 Ga0070663_100048382 3300005455 Bacteria 3015
19 Ga0070678_100001225 3300005456 Bacteria 13544
20 Ga0068867_100617940 3300005459 Bacteria 947
21 Ga0070706_100000654 3300005467 Bacteria 39587
22 Ga0070706_100002261 3300005467 Bacteria 19502
23 Ga0070706_100002552 3300005467 Bacteria 18304
24 Ga0070706_100099699 3300005467 Bacteria 2699
25 Ga0070707_100185849 3300005468 Bacteria 2026
26 Ga0070707_100342012 3300005468 Bacteria 1453
27 Ga0070707_100730331 3300005468 Bacteria 953
28 Ga0070698_100001770 3300005471 Bacteria 24083
29 Ga0070698_100039087 3300005471 Bacteria 4886
30 Ga0070698_100096284 3300005471 Bacteria 2937
31 Ga0070699_100020943 3300005518 Bacteria 5638
32 Ga0070699_100044253 3300005518 Bacteria 3855
33 Ga0070699_100134781 3300005518 Bacteria 2178
34 Ga0070697_100037489 3300005536 Bacteria 3917
35 Ga0070697_100151875 3300005536 Bacteria 1952
36 Ga0068853_100012207 3300005539 Bacteria 6986
37 Ga0070672_100000251 3300005543 Bacteria 30261
38 Ga0070686_100249147 3300005544 Bacteria 1297
39 Ga0070686_100308067 3300005544 Bacteria 1177
40 Ga0070696_100256924 3300005546 Bacteria 1323
41 Ga0070704_100137806 3300005549 Bacteria 1901
42 Ga0068854_100041402 3300005578 Bacteria 3254
43 Ga0070702_100006758 3300005615 Bacteria 5451
44 Ga0068864_100000009 3300005618 Bacteria 373756
45 Ga0068866_10013644 3300005718 Bacteria 3571
46 Ga0068858_100000638 3300005842 Bacteria 36454
47 Ga0068860_100028260 3300005843 Bacteria 5398
48 Ga0070717_10000086 3300006028 Bacteria 74612
49 Ga0070717_10059083 3300006028 Bacteria 3172
50 Ga0070715_10012675 3300006163 Bacteria 3076
51 Ga0097621_100038209 3300006237 Bacteria 3852
52 Ga0068871_100002466 3300006358 Bacteria 12635
53 Ga0075431_100700094 3300006847 Bacteria 991
54 Ga0075433_10081513 3300006852 Bacteria 2853
55 Ga0068865_100014458 3300006881 Bacteria 5015
56 Ga0075436_100057228 3300006914 Bacteria 2693
57 Ga0075436_100259181 3300006914 Bacteria 1240
58 Ga0075435_100038106 3300007076 Bacteria 3832
59 Ga0105240_10041208 3300009093 Bacteria 5896
60 Ga0105245_10003889 3300009098 Bacteria 13281
61 Ga0105245_10100828 3300009098 Bacteria 2671
62 Ga0105247_10078974 3300009101 Viruses 2070
63 Ga0114129_10013613 3300009147 Bacteria 11591
64 Ga0114129_10186044 3300009147 Bacteria 2823
65 Ga0114129_10318563 3300009147 Bacteria 2068
66 Ga0114129_10380086 3300009147 Bacteria 1865
67 Ga0105243_10004965 3300009148 Bacteria 10425
68 Ga0105241_10207017 3300009174 Bacteria 1642
69 Ga0105242_10001616 3300009176 Bacteria 17751
70 Ga0157373_10325047 3300013100 Bacteria 1094
71 Ga0157369_10245279 3300013105 Bacteria 1870
72 Ga0157374_10000005 3300013296 Bacteria 646767
73 Ga0157374_10888209 3300013296 Bacteria 909
74 Ga0157378_10638155 3300013297 Bacteria 1079
75 Ga0157372_10843665 3300013307 Bacteria 1064
76 Ga0157375_10000011 3300013308 Bacteria 334557
77 Ga0157375_10610837 3300013308 Bacteria 1249
78 Ga0163163_10704701 3300014325 Bacteria 1073
79 Ga0157377_10000001 3300014745 Bacteria 623098
80 Ga0157379_10000843 3300014968 Bacteria 24832
81 Ga0157376_10014524 3300014969 Bacteria 5915
82 Ga0157376_10238579 3300014969 Bacteria 1693
83 Ga0213872_10001573 3300021361 Bacteria 14549
84 Ga0213872_10002063 3300021361 Bacteria 12175
85 Ga0213872_10044148 3300021361 Bacteria 2029
86 Ga0213875_10182329 3300021388 Bacteria 986
87 Ga0209025_1000292 3300025294 Bacteria 112666
88 Ga0209025_1000584 3300025294 Bacteria 66147
89 Ga0207642_10023207 3300025899 Bacteria 2475
90 Ga0207705_10439149 3300025909 Bacteria 1011
91 Ga0207684_10000362 3300025910 Bacteria 61367
92 Ga0207684_10003913 3300025910 Bacteria 14270
93 Ga0207684_10060386 3300025910 Bacteria 3220
94 Ga0207684_10209119 3300025910 Bacteria 1683
95 Ga0207695_10029230 3300025913 Bacteria 6096
96 Ga0207695_10246143 3300025913 Bacteria 1688
97 Ga0207671_10126695 3300025914 Bacteria 1957
98 Ga0207646_10000004 3300025922 Bacteria 529176
99 Ga0207646_10001390 3300025922 Bacteria 29988
100 Ga0207646_10005251 3300025922 Bacteria 13665
101 Ga0207646_10400110 3300025922 Bacteria 1240
102 Ga0207687_10003087 3300025927 Bacteria 11295
103 Ga0207700_10106116 3300025928 Bacteria 2251
104 Ga0207644_10364035 3300025931 Bacteria 1177
105 Ga0207686_10040625 3300025934 Bacteria 2829
106 Ga0207670_10014305 3300025936 Bacteria 4707
107 Ga0207669_10314543 3300025937 Bacteria 1196
108 Ga0207704_10030725 3300025938 Bacteria 3016
109 Ga0207691_10001396 3300025940 Bacteria 24170
110 Ga0207677_10000010 3300026023 Bacteria 218007
111 Ga0207703_10000151 3300026035 Bacteria 80005
112 Ga0207639_10000026 3300026041 Bacteria 205256
113 Ga0207678_10044525 3300026067 Bacteria 3839
114 Ga0207648_10110114 3300026089 Bacteria 2418
115 Ga0207676_10000007 3300026095 Bacteria 591074
116 Ga0207683_10000353 3300026121 Bacteria 42039
117 Ga0209995_1016081 3300027471 Bacteria 1228
118 Ga0209999_1027966 3300027543 Bacteria 1045
119 Ga0209971_1000565 3300027682 Bacteria 9698
120 Ga0209998_10002667 3300027717 Bacteria 4032
121 Ga0268264_10055588 3300028381 Bacteria 3308
122 Ga0307408_100014051 3300031548 Bacteria 5319
123 Ga0307412_10338706 3300031911 Bacteria 1203
124 Ga0307411_10647233 3300032005 Bacteria 915
125 Ga0373937_0342114 3300036401 Bacteria 1417
126 Ga0316582_0000781 3300036647 Bacteria 12838
127 Ga0373925_0038234 3300037068 Bacteria 3547
128 Ga0395899_0331280 3300037312 Bacteria 1023
129 Ga0395900_0021720 3300037418 Bacteria 6562
130 Ga0395905_0139245 3300037471 Bacteria 2283
131 Ga0395905_0541845 3300037471 Bacteria 1065
132 Ga0436364_0794208 3300037853 Bacteria 6323
133 Ga0436361_0329874 3300039447 Bacteria 2216
134 Ga0436361_0380470 3300039447 Bacteria 20865
135 Ga0436361_0695291 3300039447 Bacteria 66094
136 Ga0436361_0912963 3300039447 Bacteria 6680
137 Ga0436361_1048003 3300039447 Bacteria 9069
138 Ga0451577_0009690 3300042876 Bacteria 9237
139 Ga0451577_0320281 3300042876 Bacteria 1406
140 Ga0466969_0017030 3300044656 Bacteria 3798
141 Ga0466969_0018301 3300044656 Bacteria 3650
142 Ga0466966_0020547 3300044684 Bacteria 4340
143 Ga0466966_0190946 3300044684 Bacteria 1241
144 Ga0466961_0000503 3300044693 Bacteria 24926
145 Ga0466961_0006267 3300044693 Bacteria 7552
146 Ga0466959_0005810 3300045049 Bacteria 8498
147 Ga0466959_0016014 3300045049 Bacteria 5471
148 Ga0495603_0130482 3300046455 Bacteria 1464
149 Ga0495651_0146873 3300046462 Bacteria 1704
150 Ga0495580_0002659 3300046472 Bacteria 15503
151 Ga0495580_0020929 3300046472 Bacteria 4831
152 Ga0495580_0020948 3300046472 Bacteria 4828
153 Ga0495664_0017473 3300046477 Bacteria 4102
154 Ga0495652_0236327 3300046529 Bacteria 1363
155 Ga0495667_0013651 3300046559 Bacteria 5492
156 Ga0495635_0335013 3300046663 Bacteria 1011
157 Ga0495599_0081596 3300046678 Bacteria 2020
158 Ga0495623_0028197 3300046679 Bacteria 3613
159 Ga0495623_0077378 3300046679 Bacteria 2063
160 Ga0495674_0003858 3300047319 Bacteria 14560
161 Ga0495674_0038577 3300047319 Bacteria 4287
162 Ga0495680_0233538 3300047322 Bacteria 1309
163 Ga0495675_0120633 3300047444 Bacteria 1633
164 Ga0495684_0001875 3300047471 Bacteria 16831
165 Ga0495684_0048377 3300047471 Bacteria 3252
166 Ga0495684_0192189 3300047471 Bacteria 1509
167 Ga0495602_0006973 3300048088 Bacteria 11867
168 Ga0496100_0022843 3300048903 Bacteria 3790
169 Ga0496101_0092354 3300048904 Bacteria 2253
170 Ga0496102_0012175 3300048905 Bacteria 7436
171 Ga0496104_0147893 3300048907 Bacteria 2256
172 Ga0496105_0056211 3300048908 Bacteria 3248
173 Ga0496106_0028476 3300048909 Bacteria 4161
174 Ga0496107_0032574 3300048910 Bacteria 3725
175 Ga0496109_0065970 3300048912 Bacteria 3314
176 Ga0496114_0009721 3300048917 Bacteria 7641
177 Ga0496115_0038598 3300048918 Bacteria 3790
178 Ga0496115_0193177 3300048918 Bacteria 1682
179 Ga0501067_0149502 3300049583 Bacteria 1301
180 Ga0501073_0039434 3300049589 Bacteria 3346
181 Ga0501074_0382044 3300049590 Bacteria 999
182 Ga0501076_0198309 3300049592 Bacteria 1639
183 Ga0501080_0075104 3300049742 Bacteria 3144
184 nmdc:mga05p37_10557_c1 3300050507 Bacteria 10951
185 nmdc:mga05p37_155324_c1 3300050507 Bacteria 2797
186 nmdc:mga05p37_32109_c1 3300050507 Bacteria 6420
187 nmdc:mga08y16_1195799_c1 3300050511 Bacteria 731
188 nmdc:mga0rr50_423312_c1 3300050513 Bacteria 1127
189 nmdc:mga0rr50_605055_c1 3300050513 Bacteria 934
190 nmdc:mga08x19_183224_c1 3300050514 Bacteria 1430
191 nmdc:mga08x19_47584_c1 3300050514 Bacteria 2745
192 nmdc:mga0a205_252739_c1 3300050515 Bacteria 1642
193 nmdc:mga0a205_600155_c1 3300050515 Bacteria 954
194 nmdc:mga0a205_81427_c1 3300050515 Bacteria 3127
195 Ga0495655_0000819 3300053083 Bacteria 4885
196 Ga0500645_004077 3300053730 Bacteria 5725

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_1195799_c1 nmdc:mga08y16_1195799_c1_70_651 160
2 3300009101 Ga0105247_10078974 Ga0105247_100789742 183
3 3300044656 Ga0466969_0017030 Ga0466969_0017030_1463_2209 184
4 3300044684 Ga0466966_0020547 Ga0466966_0020547_1062_1808 184
5 3300044693 Ga0466961_0006267 Ga0466961_0006267_520_1266 184
6 3300045049 Ga0466959_0016014 Ga0466959_0016014_3837_4583 184
7 3300048907 Ga0496104_0147893 Ga0496104_0147893_35_787 184
8 3300005440 Ga0070705_100312969 Ga0070705_1003129692 185
9 3300005549 Ga0070704_100137806 Ga0070704_1001378062 185
10 3300005578 Ga0068854_100041402 Ga0068854_1000414023 185
11 3300013100 Ga0157373_10325047 Ga0157373_103250472 185
12 3300005355 Ga0070671_100210957 Ga0070671_1002109571 189
13 3300005440 Ga0070705_100011602 Ga0070705_1000116027 189
14 3300005455 Ga0070663_100048382 Ga0070663_1000483824 189
15 3300005456 Ga0070678_100001225 Ga0070678_1000012254 189
16 3300005544 Ga0070686_100249147 Ga0070686_1002491471 189
17 3300005615 Ga0070702_100006758 Ga0070702_1000067587 189
18 3300005843 Ga0068860_100028260 Ga0068860_1000282604 189
19 3300006163 Ga0070715_10012675 Ga0070715_100126755 189
20 3300006237 Ga0097621_100038209 Ga0097621_1000382093 189
21 3300014969 Ga0157376_10238579 Ga0157376_102385792 189
22 3300025899 Ga0207642_10023207 Ga0207642_100232073 189
23 3300025931 Ga0207644_10364035 Ga0207644_103640351 189
24 3300026067 Ga0207678_10044525 Ga0207678_100445252 189
25 3300026121 Ga0207683_10000353 Ga0207683_1000035313 189
26 3300028381 Ga0268264_10055588 Ga0268264_100555883 189
27 3300048903 Ga0496100_0022843 Ga0496100_0022843_2106_2855 189
28 3300048909 Ga0496106_0028476 Ga0496106_0028476_1888_2637 189
29 3300048910 Ga0496107_0032574 Ga0496107_0032574_1627_2376 189
30 3300048917 Ga0496114_0009721 Ga0496114_0009721_6302_7051 189
31 3300048918 Ga0496115_0038598 Ga0496115_0038598_2322_3071 189
32 3300005335 Ga0070666_10137868 Ga0070666_101378683 191
33 3300005546 Ga0070696_100256924 Ga0070696_1002569242 191
34 3300005718 Ga0068866_10013644 Ga0068866_100136442 191
35 3300006358 Ga0068871_100002466 Ga0068871_10000246613 191
36 3300009148 Ga0105243_10004965 Ga0105243_1000496510 191
37 3300009176 Ga0105242_10001616 Ga0105242_100016169 191
38 3300014968 Ga0157379_10000843 Ga0157379_1000084315 191
39 3300025934 Ga0207686_10040625 Ga0207686_100406252 191
40 3300048904 Ga0496101_0092354 Ga0496101_0092354_776_1525 191
41 3300048905 Ga0496102_0012175 Ga0496102_0012175_1403_2152 191
42 3300048908 Ga0496105_0056211 Ga0496105_0056211_1994_2743 191
43 3300048912 Ga0496109_0065970 Ga0496109_0065970_819_1568 191
44 3300005467 Ga0070706_100000654 Ga0070706_10000065440 193
45 3300025937 Ga0207669_10314543 Ga0207669_103145431 194
46 3300025913 Ga0207695_10246143 Ga0207695_102461431 196
47 3300025914 Ga0207671_10126695 Ga0207671_101266951 196
48 3300005338 Ga0068868_100001237 Ga0068868_1000012377 197
49 3300005436 Ga0070713_100104079 Ga0070713_1001040793 197
50 3300005459 Ga0068867_100617940 Ga0068867_1006179401 197
51 3300005539 Ga0068853_100012207 Ga0068853_1000122073 197
52 3300005543 Ga0070672_100000251 Ga0070672_1000002514 197
53 3300005544 Ga0070686_100308067 Ga0070686_1003080672 197
54 3300005618 Ga0068864_100000009 Ga0068864_100000009247 197
55 3300005842 Ga0068858_100000638 Ga0068858_10000063830 197
56 3300006028 Ga0070717_10000086 Ga0070717_1000008621 197
57 3300006881 Ga0068865_100014458 Ga0068865_1000144582 197
58 3300009093 Ga0105240_10041208 Ga0105240_100412082 197
59 3300009098 Ga0105245_10003889 Ga0105245_100038895 197
60 3300013296 Ga0157374_10000005 Ga0157374_10000005111 197
61 3300013297 Ga0157378_10638155 Ga0157378_106381552 197
62 3300013308 Ga0157375_10000011 Ga0157375_10000011306 197
63 3300013308 Ga0157375_10610837 Ga0157375_106108372 197
64 3300014745 Ga0157377_10000001 Ga0157377_10000001462 197
65 3300025913 Ga0207695_10029230 Ga0207695_100292302 197
66 3300025927 Ga0207687_10003087 Ga0207687_100030873 197
67 3300025928 Ga0207700_10106116 Ga0207700_101061162 197
68 3300025936 Ga0207670_10014305 Ga0207670_100143051 197
69 3300025938 Ga0207704_10030725 Ga0207704_100307252 197
70 3300025940 Ga0207691_10001396 Ga0207691_1000139623 197
71 3300026023 Ga0207677_10000010 Ga0207677_10000010121 197
72 3300026035 Ga0207703_10000151 Ga0207703_100001513 197
73 3300026041 Ga0207639_10000026 Ga0207639_10000026151 197
74 3300026089 Ga0207648_10110114 Ga0207648_101101142 197
75 3300026095 Ga0207676_10000007 Ga0207676_100000072 197
76 3300053083 Ga0495655_0000819 Ga0495655_0000819_4089_4817 197
77 3300003316 rootH1_10011971 rootH1_100119711 198
78 3300003322 rootL2_10000804 rootL2_1000080419 198
79 3300021388 Ga0213875_10182329 Ga0213875_101823291 198
80 3300005406 Ga0070703_10124724 Ga0070703_101247241 199
81 3300005445 Ga0070708_100142980 Ga0070708_1001429803 199
82 3300005445 Ga0070708_100407347 Ga0070708_1004073471 199
83 3300005445 Ga0070708_100453060 Ga0070708_1004530602 199
84 3300005467 Ga0070706_100002261 Ga0070706_10000226112 199
85 3300005467 Ga0070706_100002552 Ga0070706_1000025524 199
86 3300005468 Ga0070707_100185849 Ga0070707_1001858492 199
87 3300005468 Ga0070707_100342012 Ga0070707_1003420121 199
88 3300005468 Ga0070707_100730331 Ga0070707_1007303311 199
89 3300005471 Ga0070698_100001770 Ga0070698_10000177023 199
90 3300005471 Ga0070698_100039087 Ga0070698_1000390872 199
91 3300005518 Ga0070699_100020943 Ga0070699_1000209433 199
92 3300005518 Ga0070699_100044253 Ga0070699_1000442534 199
93 3300005518 Ga0070699_100134781 Ga0070699_1001347811 199
94 3300005536 Ga0070697_100037489 Ga0070697_1000374893 199
95 3300005536 Ga0070697_100151875 Ga0070697_1001518752 199
96 3300006847 Ga0075431_100700094 Ga0075431_1007000941 199
97 3300006852 Ga0075433_10081513 Ga0075433_100815132 199
98 3300006914 Ga0075436_100057228 Ga0075436_1000572284 199
99 3300006914 Ga0075436_100259181 Ga0075436_1002591812 199
100 3300007076 Ga0075435_100038106 Ga0075435_1000381064 199
101 3300009147 Ga0114129_10013613 Ga0114129_100136138 199
102 3300009147 Ga0114129_10186044 Ga0114129_101860444 199
103 3300009147 Ga0114129_10318563 Ga0114129_103185634 199
104 3300009147 Ga0114129_10380086 Ga0114129_103800862 199
105 3300025910 Ga0207684_10000362 Ga0207684_1000036240 199
106 3300025910 Ga0207684_10003913 Ga0207684_100039138 199
107 3300025910 Ga0207684_10209119 Ga0207684_102091192 199
108 3300025922 Ga0207646_10000004 Ga0207646_1000000491 199
109 3300025922 Ga0207646_10001390 Ga0207646_1000139033 199
110 3300025922 Ga0207646_10005251 Ga0207646_1000525111 199
111 3300025922 Ga0207646_10400110 Ga0207646_104001101 199
112 3300027543 Ga0209999_1027966 Ga0209999_10279662 199
113 3300050507 nmdc:mga05p37_10557_c1 nmdc:mga05p37_10557_c1_1953_2681 199
114 3300050507 nmdc:mga05p37_155324_c1 nmdc:mga05p37_155324_c1_62_790 199
115 3300050507 nmdc:mga05p37_32109_c1 nmdc:mga05p37_32109_c1_3106_3834 199
116 3300050513 nmdc:mga0rr50_423312_c1 nmdc:mga0rr50_423312_c1_239_964 199
117 3300050513 nmdc:mga0rr50_605055_c1 nmdc:mga0rr50_605055_c1_54_782 199
118 3300050514 nmdc:mga08x19_183224_c1 nmdc:mga08x19_183224_c1_169_894 199
119 3300050514 nmdc:mga08x19_47584_c1 nmdc:mga08x19_47584_c1_908_1657 199
120 3300050515 nmdc:mga0a205_252739_c1 nmdc:mga0a205_252739_c1_808_1557 199
121 3300050515 nmdc:mga0a205_600155_c1 nmdc:mga0a205_600155_c1_22_750 199
122 3300050515 nmdc:mga0a205_81427_c1 nmdc:mga0a205_81427_c1_111_839 199
123 3300049583 Ga0501067_0149502 Ga0501067_0149502_279_992 200
124 3300049589 Ga0501073_0039434 Ga0501073_0039434_1208_1921 200
125 3300049742 Ga0501080_0075104 Ga0501080_0075104_1951_2664 200
126 3300005435 Ga0070714_100485149 Ga0070714_1004851491 205
127 3300006028 Ga0070717_10059083 Ga0070717_100590832 205
128 3300009174 Ga0105241_10207017 Ga0105241_102070172 205
129 3300013105 Ga0157369_10245279 Ga0157369_102452792 205
130 3300013296 Ga0157374_10888209 Ga0157374_108882091 205
131 3300013307 Ga0157372_10843665 Ga0157372_108436651 205
132 3300014325 Ga0163163_10704701 Ga0163163_107047011 205
133 3300014969 Ga0157376_10014524 Ga0157376_100145242 205
134 3300036401 Ga0373937_0342114 Ga0373937_0342114_105_857 205
135 3300037068 Ga0373925_0038234 Ga0373925_0038234_1655_2407 205
136 3300037853 Ga0436364_0794208 Ga0436364_0794208_3339_4091 205
137 3300046462 Ga0495651_0146873 Ga0495651_0146873_807_1559 205
138 3300046472 Ga0495580_0020929 Ga0495580_0020929_3825_4577 205
139 3300046472 Ga0495580_0020948 Ga0495580_0020948_2767_3519 205
140 3300046477 Ga0495664_0017473 Ga0495664_0017473_3038_3790 205
141 3300046529 Ga0495652_0236327 Ga0495652_0236327_599_1351 205
142 3300046559 Ga0495667_0013651 Ga0495667_0013651_3065_3817 205
143 3300046663 Ga0495635_0335013 Ga0495635_0335013_240_992 205
144 3300046678 Ga0495599_0081596 Ga0495599_0081596_691_1443 205
145 3300046679 Ga0495623_0028197 Ga0495623_0028197_1651_2403 205
146 3300046679 Ga0495623_0077378 Ga0495623_0077378_91_843 205
147 3300047319 Ga0495674_0003858 Ga0495674_0003858_1448_2200 205
148 3300047322 Ga0495680_0233538 Ga0495680_0233538_180_932 205
149 3300047444 Ga0495675_0120633 Ga0495675_0120633_336_1088 205
150 3300047471 Ga0495684_0001875 Ga0495684_0001875_7995_8747 205
151 3300047471 Ga0495684_0048377 Ga0495684_0048377_2441_3193 205
152 3300047471 Ga0495684_0192189 Ga0495684_0192189_27_779 205
153 3300048088 Ga0495602_0006973 Ga0495602_0006973_6891_7643 205
154 3300048918 Ga0496115_0193177 Ga0496115_0193177_314_1066 205
155 3300049590 Ga0501074_0382044 Ga0501074_0382044_77_841 206
156 3300009098 Ga0105245_10100828 Ga0105245_101008283 209
157 3300046455 Ga0495603_0130482 Ga0495603_0130482_668_1417 209
158 3300027471 Ga0209995_1016081 Ga0209995_10160812 210
159 iso_pu_bacteria 8002392321 8002395955 211
160 iso_pu_bacteria 8003400568 8003400853 211
161 3300036647 Ga0316582_0000781 Ga0316582_0000781_1167_1931 212
162 3300049592 Ga0501076_0198309 Ga0501076_0198309_534_1304 212
163 3300037471 Ga0395905_0541845 Ga0395905_0541845_68_805 214
164 3300003161 Ga0006765J45826_111658 Ga0006765J45826_1116582 215
165 3300003163 Ga0006759J45824_1109123 Ga0006759J45824_11091231 215
166 3300003187 JGI25151J46595_10007387 JGI25151J46595_100073872 215
167 3300005445 Ga0070708_100014351 Ga0070708_1000143518 215
168 3300005467 Ga0070706_100099699 Ga0070706_1000996992 215
169 3300005471 Ga0070698_100096284 Ga0070698_1000962842 215
170 3300021361 Ga0213872_10001573 Ga0213872_1000157311 215
171 3300021361 Ga0213872_10002063 Ga0213872_100020635 215
172 3300021361 Ga0213872_10044148 Ga0213872_100441482 215
173 3300025294 Ga0209025_1000292 Ga0209025_100029218 215
174 3300025294 Ga0209025_1000584 Ga0209025_100058445 215
175 3300025909 Ga0207705_10439149 Ga0207705_104391491 215
176 3300025910 Ga0207684_10060386 Ga0207684_100603863 215
177 3300027682 Ga0209971_1000565 Ga0209971_10005658 215
178 3300027717 Ga0209998_10002667 Ga0209998_100026672 215
179 3300031548 Ga0307408_100014051 Ga0307408_1000140514 215
180 3300031911 Ga0307412_10338706 Ga0307412_103387061 215
181 3300032005 Ga0307411_10647233 Ga0307411_106472331 215
182 3300037312 Ga0395899_0331280 Ga0395899_0331280_263_1003 215
183 3300037418 Ga0395900_0021720 Ga0395900_0021720_2162_2902 215
184 3300037471 Ga0395905_0139245 Ga0395905_0139245_77_817 215
185 3300039447 Ga0436361_0329874 Ga0436361_0329874_513_1253 215
186 3300039447 Ga0436361_0380470 Ga0436361_0380470_17509_18249 215
187 3300039447 Ga0436361_0695291 Ga0436361_0695291_43567_44307 215
188 3300039447 Ga0436361_0912963 Ga0436361_0912963_2354_3094 215
189 3300039447 Ga0436361_1048003 Ga0436361_1048003_1490_2230 215
190 3300042876 Ga0451577_0009690 Ga0451577_0009690_7493_8263 215
191 3300042876 Ga0451577_0320281 Ga0451577_0320281_496_1275 215
192 3300044656 Ga0466969_0018301 Ga0466969_0018301_16_756 215
193 3300044684 Ga0466966_0190946 Ga0466966_0190946_438_1178 215
194 3300044693 Ga0466961_0000503 Ga0466961_0000503_20119_20859 215
195 3300045049 Ga0466959_0005810 Ga0466959_0005810_4170_4910 215
196 3300046472 Ga0495580_0002659 Ga0495580_0002659_12206_12976 215
197 3300047319 Ga0495674_0038577 Ga0495674_0038577_2702_3472 215
198 3300053730 Ga0500645_004077 Ga0500645_004077_4053_4832 215

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

20

223

0.94

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

26

268

0.94

PF08659

KR

KR domain

20

212

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4trr-assembly2.cif.gz_E crystal structure of a putative putative d-beta-hydroxybutyrate dehydrogenase from burkholderia cenocepacia j2315 0.9766 3 187
3ftp-assembly1.cif.gz_D crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from burkholderia pseudomallei at 2.05 a resolution 0.9744 3 186
5jy1-assembly1.cif.gz_D crystal structure of putative short-chain dehydrogenase/reductase from burkholderia xenovorans lb400 bound to nad 0.973 3 184
3osu-assembly1.cif.gz_B crystal structure of the 3-oxoacyl-acyl carrier protein reductase, fabg, from staphylococcus aureus 0.9729 6 186
4dml-assembly2.cif.gz_D 3-oxoacyl-[acyl-carrier-protein] reductase from synechococcus elongatus pcc 7942 0.9721 1 188
ID Description Score Start End Superfamily
2et6A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9739 4 184 3.40.50.720
5jy1D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.973 3 184 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9717 2 86 3.40.50.720
4cqmK00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9716 6 186 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9716 4 186 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A519JXM6-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9888 3 184 GO:0016491
AF-A0A831Z1Z1-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9885 1 184 GO:0016491
AF-A0A1J5CGY4-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] reductase 0.9872 2 177 GO:0016616
AF-A0A3N5UD65-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9858 1 184 GO:0016491
AF-A0A7C2FLQ0-F1-model_v4 Glucose 1-dehydrogenase (EC 1.1.1.47) 0.9852 3 185 GO:0047936

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