F303718

General Info

Members Datasets Scaffolds Average Seq Length
197 149 394 169

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2858438669|2858438877
Length 172
Sequence LHDFVATVEDYPEPGVSFRDISPLMGDGVAYKQAVDAIADFAKHLNVDLIAGPESRGFIVGSPLAYAMNIGFVPARKGGKLPREAVSASYTLEYGGVNELEIHKDAIKPGQRVLIVDDLLATGGTINATREIIEKLGGIVAGVAFIIELESLQGREKIMKAGEVPFLALMEY

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
4 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
5 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
6 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
7 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
8 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
9 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
10 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
11 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
12 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
13 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
14 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
15 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
16 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
17 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
18 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
20 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
21 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
22 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
24 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
25 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
26 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
27 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
28 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
29 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
30 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
31 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
32 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
33 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
34 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
35 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
36 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
37 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
38 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
39 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
40 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
41 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
42 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
43 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
44 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
45 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
46 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
47 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
48 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
49 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
50 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
51 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
52 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
53 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
54 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
55 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
56 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
57 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
58 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
59 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 2858438669 Leuconostoc mesenteroides YL48 Isolate Unclassified
61 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
62 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
63 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
64 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
65 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
66 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
67 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
68 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
69 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
70 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
71 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
72 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
73 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
74 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
75 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
76 2671180694 Paenibacillus sp. A3 Isolate Unclassified
77 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
78 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
79 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
80 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
81 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
82 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
83 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
84 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
85 2818991459 Paenibacillus sp. 597 Isolate Unclassified
86 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
87 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
88 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
89 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
90 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
91 2857472729 Cohnella sp. R-74144 Isolate Unclassified
92 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
93 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
94 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
95 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
96 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
97 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
98 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
99 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
100 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
101 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
102 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
103 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
104 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
105 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
106 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
107 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
108 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
109 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
110 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
111 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
112 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
113 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
114 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
115 2928519762 Leuconostoc citreum 1377 Isolate Rhizosphere
116 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
117 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
118 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
119 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
120 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
121 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
122 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
123 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
124 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
125 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
126 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
127 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
128 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
129 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
130 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
131 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
132 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
133 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
134 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
135 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
136 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
137 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
138 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
139 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
140 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
141 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
142 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
143 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
144 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
145 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
146 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
147 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
148 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
149 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 53.3
Metatranscriptomes 0.51
Isolates 46.19

Biome Distribution

Category Percentage (%)
Aerial Root 1.02
Bulb 0
Endosphere 11.17
Nodule 1.02
Rhizoplane 0.51
Rhizosphere 46.7
Stem 0
Stem Tuber 0
Unclassified 1.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10012287 3300003187 Bacteria 3901
2 JGI25151J46595_10027407 3300003187 Bacteria 2284
3 Ga0055538_1000249 3300003751 Bacteria 28921
4 Ga0055532_1003467 3300003758 Bacteria 2696
5 Ga0055535_1003381 3300003761 Bacteria 4568
6 Ga0055534_1033833 3300003784 Bacteria 776
7 Ga0055541_1000228 3300003841 Bacteria 21445
8 Ga0055541_1007903 3300003841 Bacteria 1721
9 Ga0055541_1011306 3300003841 Bacteria 1313
10 Ga0075431_100419883 3300006847 Bacteria 1337
11 Ga0075433_10004212 3300006852 Bacteria 11162
12 Ga0105251_10065292 3300009011 Bacteria 1704
13 Ga0105244_10009886 3300009036 Bacteria 5821
14 Ga0105244_10215110 3300009036 Bacteria 903
15 Ga0105244_10470154 3300009036 Bacteria 578
16 Ga0114129_10694298 3300009147 Bacteria 1309
17 Ga0105246_10002972 3300011119 Bacteria 10271
18 Ga0157371_10100669 3300013102 Bacteria 2050
19 Ga0157371_10285613 3300013102 Bacteria 1192
20 Ga0157371_10455151 3300013102 Bacteria 941
21 Ga0209784_100097 3300025224 Bacteria 104918
22 Ga0209566_100049 3300025225 Bacteria 240746
23 Ga0209566_100204 3300025225 Bacteria 61331
24 Ga0209566_101067 3300025225 Bacteria 10868
25 Ga0209147_100250 3300025229 Bacteria 51192
26 Ga0209147_103080 3300025229 Bacteria 3489
27 Ga0209437_100608 3300025233 Bacteria 22090
28 Ga0209258_102212 3300025242 Bacteria 5290
29 Ga0209130_1057370 3300025284 Bacteria 687
30 Ga0209675_1023956 3300025291 Bacteria 1569
31 Ga0209025_1005537 3300025294 Bacteria 10248
32 Ga0209025_1014096 3300025294 Bacteria 4958
33 Ga0209025_1028507 3300025294 Bacteria 2732
34 Ga0207655_1044642 3300025728 Bacteria 1860
35 Ga0207655_1058894 3300025728 Bacteria 1498
36 Ga0395899_0016621 3300037312 Bacteria 5613
37 Ga0395900_0890366 3300037418 Bacteria 814
38 Ga0395905_0033109 3300037471 Bacteria 4858
39 Ga0439449_0004250 3300042007 Bacteria 5538
40 Ga0439449_0008741 3300042007 Bacteria 3842
41 Ga0439457_014890 3300042014 Bacteria 1738
42 Ga0439457_083055 3300042014 Bacteria 737
43 Ga0439462_0001792 3300042015 Bacteria 4854
44 Ga0439462_0027591 3300042015 Bacteria 1499
45 Ga0466969_0001583 3300044656 Bacteria 12173
46 Ga0453683_0005277 3300044673 Bacteria 9041
47 Ga0453683_0061978 3300044673 Bacteria 2338
48 Ga0453683_0276071 3300044673 Bacteria 1073
49 Ga0466966_0156605 3300044684 Bacteria 1387
50 Ga0466961_0012453 3300044693 Bacteria 5442
51 Ga0453684_0241981 3300044712 Bacteria 2077
52 Ga0453684_0317871 3300044712 Unclassified 1764
53 Ga0466971_0184668 3300044719 Bacteria 981
54 Ga0466959_0014788 3300045049 Bacteria 5680
55 Ga0451576_0359948 3300045051 Bacteria 1524
56 Ga0495591_067383 3300046458 Bacteria 937
57 Ga0495605_0362456 3300046474 Bacteria 607
58 Ga0495637_0190079 3300046520 Bacteria 758
59 Ga0495661_0292987 3300046665 Bacteria 817
60 Ga0495660_0224837 3300046810 Bacteria 883
61 Ga0496116_0002616 3300048919 Bacteria 18695
62 Ga0496116_0007006 3300048919 Bacteria 10094
63 Ga0496116_0009862 3300048919 Bacteria 8082
64 Ga0496116_0029422 3300048919 Bacteria 3960
65 Ga0496116_0075765 3300048919 Bacteria 2110
66 Ga0496116_0140631 3300048919 Bacteria 1359
67 Ga0496116_0441462 3300048919 Bacteria 561
68 Ga0496117_0018173 3300048920 Bacteria 5837
69 Ga0496117_0308529 3300048920 Unclassified 834
70 Ga0496118_0041573 3300048921 Bacteria 3637
71 Ga0496118_0220089 3300048921 Bacteria 1106
72 Ga0496119_0001668 3300048922 Bacteria 25943
73 Ga0496119_0003044 3300048922 Bacteria 17743
74 Ga0496120_0000059 3300048923 Bacteria 176517
75 Ga0496120_0018614 3300048923 Bacteria 4468
76 Ga0496120_0044893 3300048923 Bacteria 2564
77 Ga0496121_0058138 3300048924 Bacteria 3199
78 Ga0496121_0075601 3300048924 Bacteria 2690
79 Ga0496121_0256074 3300048924 Bacteria 1211
80 Ga0496122_0014499 3300048925 Bacteria 7610
81 Ga0496122_0035038 3300048925 Bacteria 4095
82 Ga0496122_0088595 3300048925 Bacteria 2120
83 Ga0496122_0123514 3300048925 Unclassified 1663
84 Ga0496122_0124804 3300048925 Bacteria 1650
85 Ga0496122_0223105 3300048925 Bacteria 1079
86 Ga0496122_0330036 3300048925 Bacteria 806
87 Ga0496123_0012941 3300048926 Bacteria 7055
88 Ga0496123_0048590 3300048926 Bacteria 2853
89 Ga0496124_0002039 3300048927 Bacteria 27457
90 Ga0496124_0003296 3300048927 Bacteria 19902
91 Ga0496124_0093993 3300048927 Bacteria 2440
92 Ga0496125_0000528 3300048928 Bacteria 65874
93 Ga0496125_0000649 3300048928 Bacteria 58104
94 Ga0496125_0002021 3300048928 Bacteria 27481
95 Ga0496125_0017967 3300048928 Bacteria 6722
96 Ga0496125_0215580 3300048928 Bacteria 1242
97 Ga0496126_0013701 3300048929 Bacteria 8230
98 Ga0496126_0014357 3300048929 Bacteria 8009
99 Ga0496126_0047447 3300048929 Bacteria 3932
100 Ga0501072_0366060 3300049588 Bacteria 1144
101 Ga0501208_001140 3300049655 Bacteria 2429
102 nmdc:mga05p37_74263_c2 3300050507 Bacteria 1358
103 nmdc:mga0qj67_4817_c1 3300050509 Bacteria 9802
104 nmdc:mga0n895_549331_c1 3300050512 Bacteria 1161
105 nmdc:mga0a205_7276_c1 3300050515 Bacteria 10014
106 Ga0587067_015348 3300059640 Bacteria 1241
107 2858438877 2858438669 Bacteria 2058402
108 2511178234 2510917027 Bacteria 5287437
109 2512636328 2512564013 Bacteria 6286191
110 2512735444 2512564039 Bacteria 8739048
111 2524186801 2524023129 Bacteria 6762600
112 2550901557 2548877040 Bacteria 7507281
113 2563926657 2563366752 Bacteria 4961801
114 2571526964 2571042143 Bacteria 6986194
115 2578338147 2576861424 Bacteria 5270569
116 2580931802 2579778775 Bacteria 5360914
117 2587740477 2585428059 Bacteria 8696589
118 2595320987 2593339198 Bacteria 7267884
119 2601639268 2600255286 Bacteria 5390125
120 2621276559 2619619294 Bacteria 5575484
121 2643740294 2643221543 Bacteria 6628015
122 2644426625 2643221676 Bacteria 8119172
123 2673822039 2671180694 Bacteria 7506943
124 2723605473 2721755693 Bacteria 6126117
125 2728530856 2728368933 Bacteria 7044283
126 2730136160 2728369359 Bacteria 5621728
127 2745166204 2744054657 Bacteria 5016802
128 2753813149 2751185905 Bacteria 6142767
129 2793183851 2791355222 Bacteria 5898266
130 2802438510 2802428803 Bacteria 5806948
131 2817617555 2816332336 Bacteria 5207640
132 2819672850 2818991459 Bacteria 8736032
133 2821115187 2821111986 Bacteria 6894338
134 2831906687 2831905167 Bacteria 3319172
135 2857456579 2857453340 Bacteria 8090534
136 2857463345 2857460504 Bacteria 5194327
137 2857468992 2857465823 Bacteria 6772595
138 2857473719 2857472729 Bacteria 6568124
139 2857596356 2857591370 Bacteria 6569758
140 2864736789 2864733723 Bacteria 6770668
141 2865000541 2864997549 Bacteria 5139696
142 2865003229 2865002811 Bacteria 6333767
143 2881641065 2881636855 Bacteria 5205297
144 2885531912 2885526491 Bacteria 7164189
145 2888582891 2888578766 Bacteria 6743310
146 2889047388 2889042446 Bacteria 7618936
147 2889054908 2889049205 Bacteria 7524325
148 2889281447 2889276214 Bacteria 5979355
149 2889300726 2889295896 Bacteria 4704906
150 2898909162 2898907183 Bacteria 4067722
151 2904117295 2904113452 Bacteria 7796941
152 2904162655 2904162308 Bacteria 7086713
153 2904494293 2904490793 Bacteria 7046938
154 2904599146 2904595352 Bacteria 6124848
155 2904756275 2904755435 Bacteria 7986759
156 2907206067 2907202186 Bacteria 6632024
157 2915600484 2915597211 Bacteria 6475886
158 2915608050 2915606848 Bacteria 6032732
159 2919163363 2919160200 Bacteria 6929020
160 2919428829 2919425241 Bacteria 8055701
161 2925330744 2925326138 Bacteria 9652120
162 2928520149 2928519762 Bacteria 1953908
163 2929185647 2929183550 Bacteria 6377511
164 2929210864 2929206907 Bacteria 5918291
165 2931384439 2931384279 Bacteria 7299545
166 2938650346 2938649242 Bacteria 7118381
167 2939679145 2939679117 Bacteria 6921672
168 2939708031 2939702853 Bacteria 5139229
169 2945996928 2945991243 Bacteria 7008369
170 2946059601 2946053406 Bacteria 6978655
171 2968564310 2968558590 Bacteria 6956864
172 2971407435 2971403814 Bacteria 7370929
173 2971414113 2971410472 Bacteria 8311090
174 2971512760 2971511577 Bacteria 5404012
175 2980130131 2980125574 Bacteria 5567337
176 2980177529 2980176882 Bacteria 5397533
177 2980185124 2980182181 Bacteria 9454109
178 2981287355 2981284811 Bacteria 4641497
179 2981294282 2981289755 Bacteria 4641509
180 2981983230 2981980479 Bacteria 4641628
181 2981988144 2981985349 Bacteria 4641497
182 2984530681 2984527788 Bacteria 5288478
183 2984536790 2984532647 Bacteria 5288506
184 2988228499 2988225383 Bacteria 7221625
185 2996636636 2996632988 Bacteria 6921523
186 2996708569 2996706504 Bacteria 5757485
187 648171532 648028048 Bacteria 5394884
188 8002322044 8002317523 Bacteria 8051857
189 8046999489 8046991243 Bacteria 8497463
190 8054470383 8054465665 Bacteria 7323556
191 8054800247 8054795415 Bacteria 9785225
192 8055637554 8055632911 Bacteria 5283357
193 8056539192 8056533031 Bacteria 8964429
194 8057473488 8057473075 Bacteria 5892720
195 8057475938 8057473075 Bacteria 5892720
196 8057737342 8057733483 Bacteria 6578323
197 8057977637 8057977335 Bacteria 5694872
198 JGI25151J46595_10012287
199 JGI25151J46595_10027407
200 Ga0055538_1000249
201 Ga0055532_1003467
202 Ga0055535_1003381
203 Ga0055534_1033833
204 Ga0055541_1000228
205 Ga0055541_1007903
206 Ga0055541_1011306
207 Ga0075431_100419883
208 Ga0075433_10004212
209 Ga0105251_10065292
210 Ga0105244_10009886
211 Ga0105244_10215110
212 Ga0105244_10470154
213 Ga0114129_10694298
214 Ga0105246_10002972
215 Ga0157371_10100669
216 Ga0157371_10285613
217 Ga0157371_10455151
218 Ga0209784_100097
219 Ga0209566_100049
220 Ga0209566_100204
221 Ga0209566_101067
222 Ga0209147_100250
223 Ga0209147_103080
224 Ga0209437_100608
225 Ga0209258_102212
226 Ga0209130_1057370
227 Ga0209675_1023956
228 Ga0209025_1005537
229 Ga0209025_1014096
230 Ga0209025_1028507
231 Ga0207655_1044642
232 Ga0207655_1058894
233 Ga0395899_0016621
234 Ga0395900_0890366
235 Ga0395905_0033109
236 Ga0439449_0004250
237 Ga0439449_0008741
238 Ga0439457_014890
239 Ga0439457_083055
240 Ga0439462_0001792
241 Ga0439462_0027591
242 Ga0466969_0001583
243 Ga0453683_0005277
244 Ga0453683_0061978
245 Ga0453683_0276071
246 Ga0466966_0156605
247 Ga0466961_0012453
248 Ga0453684_0241981
249 Ga0453684_0317871
250 Ga0466971_0184668
251 Ga0466959_0014788
252 Ga0451576_0359948
253 Ga0495591_067383
254 Ga0495605_0362456
255 Ga0495637_0190079
256 Ga0495661_0292987
257 Ga0495660_0224837
258 Ga0496116_0002616
259 Ga0496116_0007006
260 Ga0496116_0009862
261 Ga0496116_0029422
262 Ga0496116_0075765
263 Ga0496116_0140631
264 Ga0496116_0441462
265 Ga0496117_0018173
266 Ga0496117_0308529
267 Ga0496118_0041573
268 Ga0496118_0220089
269 Ga0496119_0001668
270 Ga0496119_0003044
271 Ga0496120_0000059
272 Ga0496120_0018614
273 Ga0496120_0044893
274 Ga0496121_0058138
275 Ga0496121_0075601
276 Ga0496121_0256074
277 Ga0496122_0014499
278 Ga0496122_0035038
279 Ga0496122_0088595
280 Ga0496122_0123514
281 Ga0496122_0124804
282 Ga0496122_0223105
283 Ga0496122_0330036
284 Ga0496123_0012941
285 Ga0496123_0048590
286 Ga0496124_0002039
287 Ga0496124_0003296
288 Ga0496124_0093993
289 Ga0496125_0000528
290 Ga0496125_0000649
291 Ga0496125_0002021
292 Ga0496125_0017967
293 Ga0496125_0215580
294 Ga0496126_0013701
295 Ga0496126_0014357
296 Ga0496126_0047447
297 Ga0501072_0366060
298 Ga0501208_001140
299 nmdc:mga05p37_74263_c2
300 nmdc:mga0qj67_4817_c1
301 nmdc:mga0n895_549331_c1
302 nmdc:mga0a205_7276_c1
303 Ga0587067_015348
304 2858438877
305 2511178234
306 2512636328
307 2512735444
308 2524186801
309 2550901557
310 2563926657
311 2571526964
312 2578338147
313 2580931802
314 2587740477
315 2595320987
316 2601639268
317 2621276559
318 2643740294
319 2644426625
320 2673822039
321 2723605473
322 2728530856
323 2730136160
324 2745166204
325 2753813149
326 2793183851
327 2802438510
328 2817617555
329 2819672850
330 2821115187
331 2831906687
332 2857456579
333 2857463345
334 2857468992
335 2857473719
336 2857596356
337 2864736789
338 2865000541
339 2865003229
340 2881641065
341 2885531912
342 2888582891
343 2889047388
344 2889054908
345 2889281447
346 2889300726
347 2898909162
348 2904117295
349 2904162655
350 2904494293
351 2904599146
352 2904756275
353 2907206067
354 2915600484
355 2915608050
356 2919163363
357 2919428829
358 2925330744
359 2928520149
360 2929185647
361 2929210864
362 2931384439
363 2938650346
364 2939679145
365 2939708031
366 2945996928
367 2946059601
368 2968564310
369 2971407435
370 2971414113
371 2971512760
372 2980130131
373 2980177529
374 2980185124
375 2981287355
376 2981294282
377 2981983230
378 2981988144
379 2984530681
380 2984536790
381 2988228499
382 2996636636
383 2996708569
384 648171532
385 8002322044
386 8046999489
387 8054470383
388 8054800247
389 8055637554
390 8056539192
391 8057473488
392 8057475938
393 8057737342
394 8057977637

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00156

Pribosyltran

Phosphoribosyl transferase domain

28

162

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lza-assembly1.cif.gz_A crystal structure of adenine phosphoribosyltransferase from thermoanaerobacter pseudethanolicus atcc 33223, nysgrc target 029700. 0.9758 2 171
4lza-assembly1.cif.gz_B crystal structure of adenine phosphoribosyltransferase from thermoanaerobacter pseudethanolicus atcc 33223, nysgrc target 029700. 0.9755 2 171
4mb6-assembly1.cif.gz_A crystal structure of adenine phosphoribosyltransferase from yersinia pseudotuberculosis. 0.9646 3 171
7xi2-assembly1.cif.gz_B crystal structure of escherichia coli adenine phosphoribosyltransferase (aprt) in complex with phosphate 0.9638 3 171
5y4a-assembly1.cif.gz_B cadmium directed assembly of adenine phosphoribosyltransferase from yersinia pseudotuberculosis. 0.9634 3 171
ID Description Score Start End Superfamily
af_P69503_1_183_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9697 3 171 3.40.50.2020
af_P12426_6_182_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9538 3 171 3.40.50.2020
af_P69503_1_183_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9532 3 171 3.40.50.2020
6fd5B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9506 3 171 3.40.50.2020
af_A0A0P0WCD3_31_176_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9502 3 133 3.40.50.2020
ID Description Score Start End GO Terms
AF-A0A7Y1X3Q4-F1-model_v4 deleted 0.9927 72 146
AF-A0A1A6HGP1-F1-model_v4 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.9907 56 171 GO:0002055
GO:0003999
GO:0005737
GO:0006166
GO:0006168
GO:0016208
GO:0044209
AF-A0A2V6PW70-F1-model_v4 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.99 78 171 GO:0002055
GO:0003999
GO:0005737
GO:0006166
GO:0006168
GO:0016208
GO:0044209
AF-A0A7K8KGZ8-F1-model_v4 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.9894 62 171 GO:0002055
GO:0003999
GO:0005737
GO:0006166
GO:0006168
GO:0016208
GO:0044209
AF-A0A836BFT3-F1-model_v4 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.9894 67 171 GO:0002055
GO:0003999
GO:0005737
GO:0006166
GO:0006168
GO:0016208
GO:0044209

Map