F303505

General Info

Members Datasets Scaffolds Average Seq Length
197 150 394 137

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0019281|Ga0495686_0019281_578_1090
Length 170
Sequence VAQLRGKHRALCGKRFYFNRISTSKEIYMDRKASAIWHGDLKSGKGTISTQSSTLKETQYSFKSRFEEGVGTNPEELIAAAHAGCFSMAFANALAEAGHVATSVETTAVLTLDPAAAGGPTITKIHLINTSAVPGIDKAVFDEIAAKAKAGCPVSKVLKAADITLDATLA

Samples

Sample ID Description Type Environment
1 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
96 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
97 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
98 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
117 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
127 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
128 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
133 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 8054357960 Idiomarina rhizosphaerae M1R2S28 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0
Isolates 0.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 0
Rhizoplane 0.51
Rhizosphere 96.95
Stem 0
Stem Tuber 0
Unclassified 15.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495686_0019281 3300047472 Bacteria 4560
2 SwRhRL2b_contig_1598942 2162886007 Bacteria 1005
3 SwRhRL2b_contig_1886170 2162886007 Bacteria 206362
4 rootH2_10310642 3300003320 Bacteria 2074
5 Ga0065714_10089484 3300005288 Bacteria 1978
6 Ga0065704_10070159 3300005289 Bacteria 207348
7 Ga0065704_10071667 3300005289 Bacteria 10312
8 Ga0070658_10138424 3300005327 Bacteria 2032
9 Ga0070676_10408470 3300005328 Bacteria 946
10 Ga0070676_10675661 3300005328 Bacteria 752
11 Ga0070683_101353755 3300005329 Unclassified 684
12 Ga0070690_100008214 3300005330 Bacteria 6004
13 Ga0070682_100004192 3300005337 Bacteria 7996
14 Ga0068868_100056575 3300005338 Bacteria 3097
15 Ga0070660_100012720 3300005339 Bacteria 6016
16 Ga0070687_100598215 3300005343 Unclassified 757
17 Ga0070668_100397649 3300005347 Bacteria 1176
18 Ga0070668_101226617 3300005347 Bacteria 680
19 Ga0070669_101692409 3300005353 Bacteria 551
20 Ga0070675_100040912 3300005354 Bacteria 3785
21 Ga0070675_100595414 3300005354 Unclassified 1002
22 Ga0070675_100760154 3300005354 Bacteria 885
23 Ga0070671_100073397 3300005355 Bacteria 2858
24 Ga0070673_100052114 3300005364 Bacteria 3209
25 Ga0070673_100593578 3300005364 Unclassified 1010
26 Ga0070659_100013106 3300005366 Bacteria 6166
27 Ga0070678_100238080 3300005456 Unclassified 1520
28 Ga0070678_100338094 3300005456 Bacteria 1291
29 Ga0070678_101090084 3300005456 Unclassified 737
30 Ga0070678_101304434 3300005456 Bacteria 675
31 Ga0070681_10036692 3300005458 Bacteria 4922
32 Ga0070681_10463222 3300005458 Bacteria 1180
33 Ga0068867_100360023 3300005459 Bacteria 1217
34 Ga0070707_101066216 3300005468 Bacteria 774
35 Ga0070679_100010833 3300005530 Bacteria 8663
36 Ga0070679_100200522 3300005530 Bacteria 1962
37 Ga0070684_100015044 3300005535 Bacteria 6287
38 Ga0068853_100032194 3300005539 Bacteria 4441
39 Ga0068853_101492952 3300005539 Bacteria 654
40 Ga0068855_100043965 3300005563 Bacteria 5288
41 Ga0070664_100154619 3300005564 Bacteria 2026
42 Ga0068857_100441793 3300005577 Bacteria 1215
43 Ga0068854_100051616 3300005578 Bacteria 2947
44 Ga0068856_100048492 3300005614 Bacteria 4186
45 Ga0068852_100091528 3300005616 Bacteria 2722
46 Ga0068861_100157449 3300005719 Bacteria 1870
47 Ga0068851_10233095 3300005834 Bacteria 1038
48 Ga0068870_10320453 3300005840 Unclassified 985
49 Ga0068860_100307519 3300005843 Bacteria 1554
50 Ga0068860_101470022 3300005843 Bacteria 703
51 Ga0070716_100594546 3300006173 Bacteria 831
52 Ga0097621_100003186 3300006237 Bacteria 11280
53 Ga0097621_101069397 3300006237 Bacteria 756
54 Ga0068871_100004463 3300006358 Bacteria 9744
55 Ga0068871_100007716 3300006358 Bacteria 7701
56 Ga0068871_100418261 3300006358 Unclassified 1196
57 Ga0068871_102217332 3300006358 Bacteria 523
58 Ga0068865_100848059 3300006881 Unclassified 791
59 Ga0111539_10717453 3300009094 Bacteria 1164
60 Ga0105241_10000426 3300009174 Bacteria 31864
61 Ga0105241_10261633 3300009174 Unclassified 1470
62 Ga0105242_10137809 3300009176 Unclassified 2114
63 Ga0105237_10003853 3300009545 Bacteria 17642
64 Ga0105249_10306028 3300009553 Bacteria 1596
65 Ga0105239_11945660 3300010375 Bacteria 682
66 Ga0157373_10003271 3300013100 Bacteria 12236
67 Ga0157373_10487421 3300013100 Bacteria 890
68 Ga0157371_10000019 3300013102 Bacteria 307914
69 Ga0157370_10002925 3300013104 Bacteria 20337
70 Ga0157370_10032302 3300013104 Bacteria 5112
71 Ga0157369_10001589 3300013105 Bacteria 27847
72 Ga0157369_10009277 3300013105 Bacteria 11257
73 Ga0157369_10269041 3300013105 Bacteria 1776
74 Ga0157374_10189651 3300013296 Bacteria 2011
75 Ga0157374_11279315 3300013296 Unclassified 755
76 Ga0157378_10011695 3300013297 Bacteria 7681
77 Ga0157378_10847250 3300013297 Bacteria 942
78 Ga0157378_10937954 3300013297 Bacteria 898
79 Ga0163162_10002002 3300013306 Bacteria 19161
80 Ga0163162_10150949 3300013306 Bacteria 2441
81 Ga0163162_10690043 3300013306 Bacteria 1143
82 Ga0157372_10059150 3300013307 Bacteria 4285
83 Ga0157372_11421855 3300013307 Bacteria 799
84 Ga0157372_11780001 3300013307 Unclassified 708
85 Ga0157375_10093687 3300013308 Bacteria 3070
86 Ga0157375_10576537 3300013308 Bacteria 1286
87 Ga0157380_12185846 3300014326 Bacteria 617
88 Ga0157380_12650098 3300014326 Bacteria 568
89 Ga0157377_10018626 3300014745 Bacteria 3611
90 Ga0157379_10086934 3300014968 Bacteria 2803
91 Ga0157376_10004953 3300014969 Bacteria 9287
92 Ga0157376_10045692 3300014969 Bacteria 3607
93 Ga0157376_10213608 3300014969 Bacteria 1783
94 Ga0157376_10575856 3300014969 Bacteria 1117
95 Ga0213876_10006254 3300021384 Bacteria 6494
96 Ga0207656_10083388 3300025321 Unclassified 1440
97 Ga0207682_10013215 3300025893 Bacteria 3219
98 Ga0207642_10080678 3300025899 Bacteria 1579
99 Ga0207647_10035031 3300025904 Bacteria 3201
100 Ga0207645_10303967 3300025907 Bacteria 1062
101 Ga0207645_10777593 3300025907 Bacteria 651
102 Ga0207707_10289237 3300025912 Unclassified 1418
103 Ga0207657_10004288 3300025919 Bacteria 15100
104 Ga0207649_10339158 3300025920 Bacteria 1109
105 Ga0207652_10160423 3300025921 Bacteria 2016
106 Ga0207652_10206380 3300025921 Unclassified 1769
107 Ga0207659_10310889 3300025926 Bacteria 1297
108 Ga0207644_10140239 3300025931 Bacteria 1861
109 Ga0207690_10464350 3300025932 Bacteria 1019
110 Ga0207706_10036011 3300025933 Bacteria 4397
111 Ga0207691_10066743 3300025940 Unclassified 3254
112 Ga0207661_10252051 3300025944 Bacteria 1569
113 Ga0207679_11074609 3300025945 Bacteria 738
114 Ga0207667_11110842 3300025949 Bacteria 773
115 Ga0207651_10195722 3300025960 Bacteria 1616
116 Ga0207668_10426283 3300025972 Bacteria 1127
117 Ga0207640_10052863 3300025981 Bacteria 2648
118 Ga0207677_10402469 3300026023 Bacteria 1161
119 Ga0207703_11997739 3300026035 Bacteria 556
120 Ga0207639_10022319 3300026041 Bacteria 4558
121 Ga0207678_10739127 3300026067 Bacteria 867
122 Ga0207648_10231202 3300026089 Bacteria 1645
123 Ga0207648_10343551 3300026089 Bacteria 1344
124 Ga0207683_10207504 3300026121 Bacteria 1782
125 Ga0207683_10948028 3300026121 Unclassified 799
126 Ga0207698_10019692 3300026142 Bacteria 4626
127 Ga0268266_11255809 3300028379 Bacteria 716
128 Ga0268265_10845155 3300028380 Bacteria 895
129 Ga0268264_10016500 3300028381 Bacteria 6046
130 Ga0265338_10000226 3300028800 Bacteria 104993
131 Ga0307516_10576586 3300031730 Bacteria 779
132 Ga0307410_10271140 3300031852 Bacteria 1328
133 Ga0307409_101342488 3300031995 Bacteria 741
134 Ga0373926_0032102 3300035083 Bacteria 1852
135 Ga0373945_0206442 3300035116 Bacteria 817
136 Ga0373946_0140174 3300035171 Bacteria 1120
137 Ga0373955_0005866 3300035172 Bacteria 5550
138 Ga0373931_0812518 3300035691 Bacteria 624
139 Ga0373935_0078680 3300035692 Bacteria 2139
140 Ga0373933_0488241 3300035724 Bacteria 807
141 Ga0373947_0000158 3300035725 Bacteria 35999
142 Ga0373937_0674749 3300036401 Bacteria 979
143 Ga0373925_0000446 3300037068 Bacteria 41723
144 Ga0373925_0233898 3300037068 Archaea 1470
145 Ga0436365_0508219 3300039437 Bacteria 27053
146 Ga0436362_0764422 3300039453 Bacteria 1771
147 Ga0451577_0004352 3300042876 Bacteria 14999
148 Ga0466966_0322265 3300044684 Bacteria 928
149 Ga0466961_0106530 3300044693 Bacteria 1765
150 Ga0453684_0003453 3300044712 Bacteria 35539
151 Ga0453684_0515935 3300044712 Bacteria 1321
152 Ga0453684_1242018 3300044712 Unclassified 780
153 Ga0466971_0586153 3300044719 Bacteria 555
154 Ga0451576_0557915 3300045051 Bacteria 1203
155 Ga0495590_0019958 3300046457 Bacteria 2383
156 Ga0495629_0020753 3300046459 Bacteria 4690
157 Ga0495580_0043123 3300046472 Bacteria 3212
158 Ga0495607_0372975 3300046501 Unclassified 654
159 Ga0495606_0007306 3300046507 Bacteria 9946
160 Ga0495630_0134471 3300046517 Archaea 1879
161 Ga0495630_0237709 3300046517 Unclassified 1392
162 Ga0495630_0543154 3300046517 Bacteria 891
163 Ga0495652_0206781 3300046529 Archaea 1486
164 Ga0495665_0065782 3300046531 Bacteria 1914
165 Ga0495586_0114053 3300046535 Archaea 1506
166 Ga0495645_0354642 3300046543 Unclassified 944
167 Ga0495634_0855427 3300046642 Unclassified 516
168 Ga0495611_0091915 3300046648 Bacteria 1403
169 Ga0495635_0065877 3300046663 Bacteria 2485
170 Ga0495647_0345871 3300046681 Unclassified 676
171 Ga0495658_0006933 3300046683 Bacteria 5588
172 Ga0495581_0211659 3300047315 Archaea 1133
173 Ga0495674_0219243 3300047319 Archaea 1573
174 Ga0495593_0373468 3300047673 Unclassified 713
175 Ga0496115_0088028 3300048918 Bacteria 2535
176 Ga0501298_060714 3300049521 Unclassified 800
177 Ga0501300_056273 3300049523 Bacteria 615
178 Ga0501031_0013524 3300049568 Bacteria 5319
179 Ga0501032_0716288 3300049569 Bacteria 634
180 Ga0501033_1069722 3300049570 Bacteria 537
181 Ga0501047_0303343 3300049581 Bacteria 1439
182 Ga0501067_0081201 3300049583 Unclassified 1797
183 Ga0501068_0016441 3300049584 Bacteria 4266
184 Ga0501069_0050124 3300049585 Unclassified 2321
185 Ga0501070_0087278 3300049586 Bacteria 2582
186 Ga0501073_0035919 3300049589 Bacteria 3521
187 Ga0501080_0465976 3300049742 Bacteria 1131
188 Ga0501080_1061551 3300049742 Bacteria 700
189 Ga0501083_0093905 3300049744 Unclassified 1980
190 Ga0501083_0927727 3300049744 Bacteria 566
191 Ga0501044_0396271 3300049823 Bacteria 1294
192 Ga0495619_0259945 3300053085 Archaea 1203
193 Ga0500592_003896 3300053116 Bacteria 2383
194 Ga0501084_0098394 3300054114 Unclassified 2456
195 Ga0501084_1849155 3300054114 Bacteria 504
196 Ga0501082_0083693 3300060353 Unclassified 2752
197 8054359082 8054357960 Bacteria 2867777
198 Ga0495686_0019281
199 SwRhRL2b_contig_1598942
200 SwRhRL2b_contig_1886170
201 rootH2_10310642
202 Ga0065714_10089484
203 Ga0065704_10070159
204 Ga0065704_10071667
205 Ga0070658_10138424
206 Ga0070676_10408470
207 Ga0070676_10675661
208 Ga0070683_101353755
209 Ga0070690_100008214
210 Ga0070682_100004192
211 Ga0068868_100056575
212 Ga0070660_100012720
213 Ga0070687_100598215
214 Ga0070668_100397649
215 Ga0070668_101226617
216 Ga0070669_101692409
217 Ga0070675_100040912
218 Ga0070675_100595414
219 Ga0070675_100760154
220 Ga0070671_100073397
221 Ga0070673_100052114
222 Ga0070673_100593578
223 Ga0070659_100013106
224 Ga0070678_100238080
225 Ga0070678_100338094
226 Ga0070678_101090084
227 Ga0070678_101304434
228 Ga0070681_10036692
229 Ga0070681_10463222
230 Ga0068867_100360023
231 Ga0070707_101066216
232 Ga0070679_100010833
233 Ga0070679_100200522
234 Ga0070684_100015044
235 Ga0068853_100032194
236 Ga0068853_101492952
237 Ga0068855_100043965
238 Ga0070664_100154619
239 Ga0068857_100441793
240 Ga0068854_100051616
241 Ga0068856_100048492
242 Ga0068852_100091528
243 Ga0068861_100157449
244 Ga0068851_10233095
245 Ga0068870_10320453
246 Ga0068860_100307519
247 Ga0068860_101470022
248 Ga0070716_100594546
249 Ga0097621_100003186
250 Ga0097621_101069397
251 Ga0068871_100004463
252 Ga0068871_100007716
253 Ga0068871_100418261
254 Ga0068871_102217332
255 Ga0068865_100848059
256 Ga0111539_10717453
257 Ga0105241_10000426
258 Ga0105241_10261633
259 Ga0105242_10137809
260 Ga0105237_10003853
261 Ga0105249_10306028
262 Ga0105239_11945660
263 Ga0157373_10003271
264 Ga0157373_10487421
265 Ga0157371_10000019
266 Ga0157370_10002925
267 Ga0157370_10032302
268 Ga0157369_10001589
269 Ga0157369_10009277
270 Ga0157369_10269041
271 Ga0157374_10189651
272 Ga0157374_11279315
273 Ga0157378_10011695
274 Ga0157378_10847250
275 Ga0157378_10937954
276 Ga0163162_10002002
277 Ga0163162_10150949
278 Ga0163162_10690043
279 Ga0157372_10059150
280 Ga0157372_11421855
281 Ga0157372_11780001
282 Ga0157375_10093687
283 Ga0157375_10576537
284 Ga0157380_12185846
285 Ga0157380_12650098
286 Ga0157377_10018626
287 Ga0157379_10086934
288 Ga0157376_10004953
289 Ga0157376_10045692
290 Ga0157376_10213608
291 Ga0157376_10575856
292 Ga0213876_10006254
293 Ga0207656_10083388
294 Ga0207682_10013215
295 Ga0207642_10080678
296 Ga0207647_10035031
297 Ga0207645_10303967
298 Ga0207645_10777593
299 Ga0207707_10289237
300 Ga0207657_10004288
301 Ga0207649_10339158
302 Ga0207652_10160423
303 Ga0207652_10206380
304 Ga0207659_10310889
305 Ga0207644_10140239
306 Ga0207690_10464350
307 Ga0207706_10036011
308 Ga0207691_10066743
309 Ga0207661_10252051
310 Ga0207679_11074609
311 Ga0207667_11110842
312 Ga0207651_10195722
313 Ga0207668_10426283
314 Ga0207640_10052863
315 Ga0207677_10402469
316 Ga0207703_11997739
317 Ga0207639_10022319
318 Ga0207678_10739127
319 Ga0207648_10231202
320 Ga0207648_10343551
321 Ga0207683_10207504
322 Ga0207683_10948028
323 Ga0207698_10019692
324 Ga0268266_11255809
325 Ga0268265_10845155
326 Ga0268264_10016500
327 Ga0265338_10000226
328 Ga0307516_10576586
329 Ga0307410_10271140
330 Ga0307409_101342488
331 Ga0373926_0032102
332 Ga0373945_0206442
333 Ga0373946_0140174
334 Ga0373955_0005866
335 Ga0373931_0812518
336 Ga0373935_0078680
337 Ga0373933_0488241
338 Ga0373947_0000158
339 Ga0373937_0674749
340 Ga0373925_0000446
341 Ga0373925_0233898
342 Ga0436365_0508219
343 Ga0436362_0764422
344 Ga0451577_0004352
345 Ga0466966_0322265
346 Ga0466961_0106530
347 Ga0453684_0003453
348 Ga0453684_0515935
349 Ga0453684_1242018
350 Ga0466971_0586153
351 Ga0451576_0557915
352 Ga0495590_0019958
353 Ga0495629_0020753
354 Ga0495580_0043123
355 Ga0495607_0372975
356 Ga0495606_0007306
357 Ga0495630_0134471
358 Ga0495630_0237709
359 Ga0495630_0543154
360 Ga0495652_0206781
361 Ga0495665_0065782
362 Ga0495586_0114053
363 Ga0495645_0354642
364 Ga0495634_0855427
365 Ga0495611_0091915
366 Ga0495635_0065877
367 Ga0495647_0345871
368 Ga0495658_0006933
369 Ga0495581_0211659
370 Ga0495674_0219243
371 Ga0495593_0373468
372 Ga0496115_0088028
373 Ga0501298_060714
374 Ga0501300_056273
375 Ga0501031_0013524
376 Ga0501032_0716288
377 Ga0501033_1069722
378 Ga0501047_0303343
379 Ga0501067_0081201
380 Ga0501068_0016441
381 Ga0501069_0050124
382 Ga0501070_0087278
383 Ga0501073_0035919
384 Ga0501080_0465976
385 Ga0501080_1061551
386 Ga0501083_0093905
387 Ga0501083_0927727
388 Ga0501044_0396271
389 Ga0495619_0259945
390 Ga0500592_003896
391 Ga0501084_0098394
392 Ga0501084_1849155
393 Ga0501082_0083693
394 8054359082

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02566

OsmC

OsmC-like protein

67

167

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nye-assembly2.cif.gz_D crystal structure of osmc from e. coli 0.952 1 137
1qwi-assembly1.cif.gz_B crystal structure of e. coli osmc 0.9478 1 137
1nye-assembly2.cif.gz_C crystal structure of osmc from e. coli 0.9463 1 137
1nye-assembly2.cif.gz_D crystal structure of osmc from e. coli 0.9453 1 137
1nye-assembly1.cif.gz_A crystal structure of osmc from e. coli 0.9446 1 137
ID Description Score Start End Superfamily
1nyeE00 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9562 1 137 3.30.300.20
1nyeE00 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9494 1 137 3.30.300.20
1ml8A02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9204 46 136 3.30.300.20
af_Q55EI4_11_156_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9025 4 136 3.30.300.20
af_Q2G1T3_42_139_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.8971 45 136 3.30.300.20
ID Description Score Start End GO Terms
AF-A0A258Y8I4-F1-model_v4 OsmC family peroxiredoxin 1.004 51 137 GO:0004601
GO:0006979
AF-A0A2W5FXT9-F1-model_v4 OsmC family peroxiredoxin 1.001 43 137 GO:0004601
GO:0006979
AF-A0A257KYW8-F1-model_v4 OsmC family peroxiredoxin 0.9963 42 136 GO:0004601
GO:0006979
AF-A0A2W5FXT9-F1-model_v4 OsmC family peroxiredoxin 0.9908 43 137 GO:0004601
GO:0006979
AF-A0A257KYW8-F1-model_v4 OsmC family peroxiredoxin 0.9859 42 136 GO:0004601
GO:0006979

Map