F303226

General Info

Members Datasets Scaffolds Average Seq Length
197 119 394 317

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10024406|Ga0316576_100244063
Length 348
Sequence MYGPRPALETNMSDLVDQAHARGAMTGISAVHANVLDLIGNTPIVDVSNLSPNPNVRILAKLEMQNPFGSVKDRIAKAMIEAAEADGTLLPGQTILEPSSGNTGIALAGIARLKGYPIKILLPDSVSVERRQMLEIMGAEIILTPGPEGSNGAVKRALELAEEHPEWCLIYQYGNEANPRAHYEGTGPEIWRDVPEITHFVAGLGTSGTLMGTGTFLKEQNPDIQIVAVEPPLGERVEGLRNMDEGYIPPIFDLWNGRELLDRKRVVRPRESIEWVRRLVAECGVFAGLSSGAALAGAVKVASQIEPADGPATIVFIVCDGGWKYLSTGAYTGDLDAAEESAESIIYF

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
3 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
4 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
5 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
8 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
9 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
10 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
54 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
56 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
57 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
60 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
70 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
71 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
72 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
73 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
74 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
79 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
91 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
92 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
97 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
98 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
99 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
100 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
107 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
108 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
109 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
110 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
113 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
114 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
115 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
116 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0.51
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.74
Nodule 0
Rhizoplane 5.58
Rhizosphere 76.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10024406 3300031727 Bacteria 4221
2 Ga0070688_100170415 3300005365 Bacteria 1502
3 Ga0070705_100077109 3300005440 Bacteria 2035
4 Ga0070678_100213009 3300005456 Bacteria 1602
5 Ga0068867_100010660 3300005459 Bacteria 6483
6 Ga0070698_100020746 3300005471 Bacteria 6886
7 Ga0070695_100078822 3300005545 Bacteria 2173
8 Ga0068859_100174057 3300005617 Bacteria 2234
9 Ga0068859_100359675 3300005617 Bacteria 1551
10 Ga0068866_10020285 3300005718 Bacteria 3044
11 Ga0068863_100315044 3300005841 Bacteria 1519
12 Ga0068858_100011006 3300005842 Bacteria 8550
13 Ga0068860_100092925 3300005843 Bacteria 2875
14 Ga0068860_100195038 3300005843 Bacteria 1961
15 Ga0068862_100207631 3300005844 Bacteria 1768
16 Ga0068862_100243829 3300005844 Bacteria 1635
17 Ga0075365_10054549 3300006038 Bacteria 2651
18 Ga0075365_10101174 3300006038 Bacteria 1973
19 Ga0075363_100031664 3300006048 Bacteria 2744
20 Ga0075364_10011146 3300006051 Bacteria 5455
21 Ga0075364_10014679 3300006051 Bacteria 4845
22 Ga0075364_10066969 3300006051 Bacteria 2360
23 Ga0075364_10102639 3300006051 Bacteria 1904
24 Ga0075362_10014852 3300006177 Bacteria 3153
25 Ga0075362_10029589 3300006177 Bacteria 2361
26 Ga0075367_10023358 3300006178 Bacteria 3478
27 Ga0075367_10080017 3300006178 Bacteria 1976
28 Ga0075367_10180587 3300006178 Bacteria 1316
29 Ga0097621_100080730 3300006237 Bacteria 2706
30 Ga0075370_10107138 3300006353 Bacteria 1621
31 Ga0097620_100174056 3300006931 Bacteria 2234
32 Ga0097620_100359680 3300006931 Bacteria 1551
33 Ga0105245_10197109 3300009098 Bacteria 1932
34 Ga0105243_10082843 3300009148 Bacteria 2623
35 Ga0105242_10006519 3300009176 Bacteria 8986
36 Ga0105249_10208206 3300009553 Bacteria 1918
37 Ga0163162_10197475 3300013306 Bacteria 2141
38 Ga0163162_10473894 3300013306 Bacteria 1383
39 Ga0157375_10210126 3300013308 Bacteria 2103
40 Ga0157375_10403811 3300013308 Bacteria 1533
41 Ga0157375_10630613 3300013308 Bacteria 1229
42 Ga0163163_10095439 3300014325 Bacteria 2993
43 Ga0157380_10302322 3300014326 Bacteria 1474
44 Ga0157376_10294873 3300014969 Bacteria 1533
45 Ga0213876_10060323 3300021384 Bacteria 2001
46 Ga0207645_10130392 3300025907 Bacteria 1636
47 Ga0207645_10260688 3300025907 Bacteria 1148
48 Ga0207644_10433882 3300025931 Bacteria 1078
49 Ga0207686_10005926 3300025934 Bacteria 6559
50 Ga0207709_10006421 3300025935 Bacteria 6598
51 Ga0207670_10044192 3300025936 Bacteria 2946
52 Ga0207651_10109683 3300025960 Bacteria 2069
53 Ga0207668_10145120 3300025972 Bacteria 1830
54 Ga0207703_10007366 3300026035 Bacteria 8744
55 Ga0207703_10122204 3300026035 Bacteria 2237
56 Ga0207641_10205639 3300026088 Bacteria 1818
57 Ga0207648_10001932 3300026089 Bacteria 22653
58 Ga0207676_10297272 3300026095 Bacteria 1473
59 Ga0207675_100094662 3300026118 Bacteria 2810
60 Ga0207675_100109087 3300026118 Bacteria 2611
61 Ga0207675_100137480 3300026118 Bacteria 2319
62 Ga0207683_10118367 3300026121 Bacteria 2376
63 Ga0207683_10168388 3300026121 Bacteria 1983
64 Ga0207683_10193419 3300026121 Bacteria 1848
65 Ga0207683_10466351 3300026121 Bacteria 1165
66 Ga0209998_10000265 3300027717 Bacteria 17002
67 Ga0209974_10001987 3300027876 Bacteria 7459
68 Ga0268265_10059890 3300028380 Bacteria 2916
69 Ga0268265_10123072 3300028380 Bacteria 2141
70 Ga0268264_10096331 3300028381 Bacteria 2563
71 Ga0268264_10430674 3300028381 Bacteria 1274
72 Ga0316576_10002805 3300031727 Bacteria 10018
73 Ga0316576_10136369 3300031727 Bacteria 1847
74 Ga0316578_10034734 3300031728 Bacteria 2896
75 Ga0307409_100022486 3300031995 Bacteria 4349
76 Ga0307416_100404707 3300032002 Bacteria 1403
77 Ga0307411_10393632 3300032005 Bacteria 1143
78 Ga0316580_10036679 3300032139 Bacteria 1517
79 Ga0316588_1037644 3300033528 Bacteria 1151
80 Ga0316574_0036719 3300035398 Bacteria 3001
81 Ga0316574_0038551 3300035398 Bacteria 2934
82 Ga0316574_0071058 3300035398 Bacteria 2198
83 Ga0316582_0265453 3300036647 Bacteria 1177
84 Ga0316584_0023877 3300036712 Bacteria 4469
85 Ga0316584_0043407 3300036712 Bacteria 3352
86 Ga0316584_0173811 3300036712 Bacteria 1596
87 Ga0395905_0130685 3300037471 Bacteria 2362
88 Ga0400483_027049 3300039062 Bacteria 24974
89 Ga0400483_234291 3300039062 Bacteria 2115
90 Ga0400487_17155 3300039110 Bacteria 1337
91 Ga0436365_0282680 3300039437 Bacteria 2179
92 Ga0439434_0003602 3300042435 Bacteria 4525
93 Ga0451577_0015511 3300042876 Bacteria 7087
94 Ga0495629_0166503 3300046459 Bacteria 1530
95 Ga0495618_0142448 3300046514 Bacteria 1533
96 Ga0495630_0165431 3300046517 Bacteria 1684
97 Ga0495586_0010074 3300046535 Bacteria 5031
98 Ga0495613_0000657 3300046689 Bacteria 27420
99 Ga0495670_0082835 3300046691 Bacteria 1636
100 Ga0495672_0003668 3300047320 Bacteria 12979
101 Ga0495676_0144790 3300047321 Bacteria 1699
102 Ga0496101_0041089 3300048904 Bacteria 3296
103 Ga0496104_0018492 3300048907 Bacteria 6358
104 Ga0496107_0239675 3300048910 Bacteria 1349
105 Ga0496108_0425582 3300048911 Bacteria 1160
106 Ga0496109_0232126 3300048912 Bacteria 1736
107 Ga0496110_0023105 3300048913 Bacteria 5288
108 Ga0496110_0046894 3300048913 Bacteria 3781
109 Ga0496111_0102894 3300048914 Bacteria 2100
110 Ga0496111_0145774 3300048914 Bacteria 1755
111 Ga0496111_0241130 3300048914 Bacteria 1343
112 Ga0496114_0026909 3300048917 Bacteria 4711
113 Ga0501033_0010990 3300049570 Bacteria 6936
114 Ga0501034_0000888 3300049571 Bacteria 43830
115 Ga0501034_0007937 3300049571 Bacteria 11272
116 Ga0501034_0070882 3300049571 Bacteria 3496
117 Ga0501036_0071302 3300049572 Bacteria 2938
118 Ga0501037_0046043 3300049573 Bacteria 3200
119 Ga0501039_0023238 3300049575 Bacteria 4759
120 Ga0501039_0031949 3300049575 Bacteria 4059
121 Ga0501039_0033225 3300049575 Bacteria 3979
122 Ga0501039_0332366 3300049575 Bacteria 1194
123 Ga0501040_0065369 3300049576 Bacteria 2505
124 Ga0501040_0074321 3300049576 Bacteria 2349
125 Ga0501041_0024534 3300049577 Bacteria 3620
126 Ga0501041_0034771 3300049577 Bacteria 3052
127 Ga0501042_0161751 3300049578 Bacteria 1615
128 Ga0501047_0054747 3300049581 Bacteria 3859
129 Ga0501048_0119067 3300049582 Bacteria 1866
130 Ga0501048_0202289 3300049582 Bacteria 1408
131 Ga0501067_0019421 3300049583 Bacteria 3762
132 Ga0501067_0220216 3300049583 Bacteria 1057
133 Ga0501068_0000026 3300049584 Bacteria 54959
134 Ga0501068_0014256 3300049584 Bacteria 4541
135 Ga0501069_0188548 3300049585 Bacteria 1193
136 Ga0501070_0001583 3300049586 Bacteria 20204
137 Ga0501070_0101690 3300049586 Bacteria 2377
138 Ga0501071_0000981 3300049587 Bacteria 15618
139 Ga0501071_0025081 3300049587 Bacteria 4175
140 Ga0501071_0055983 3300049587 Bacteria 2848
141 Ga0501072_0011941 3300049588 Bacteria 6633
142 Ga0501072_0018012 3300049588 Bacteria 5430
143 Ga0501072_0192193 3300049588 Bacteria 1628
144 Ga0501072_0264545 3300049588 Bacteria 1369
145 Ga0501072_0370541 3300049588 Bacteria 1137
146 Ga0501073_0007074 3300049589 Bacteria 8361
147 Ga0501073_0012092 3300049589 Bacteria 6301
148 Ga0501074_0001393 3300049590 Bacteria 16061
149 Ga0501074_0030985 3300049590 Bacteria 3876
150 Ga0501074_0143780 3300049590 Bacteria 1706
151 Ga0501075_0051912 3300049591 Bacteria 3083
152 Ga0501075_0072661 3300049591 Bacteria 2601
153 Ga0501076_0168867 3300049592 Bacteria 1783
154 Ga0501079_0090000 3300049741 Bacteria 2377
155 Ga0501080_0000773 3300049742 Bacteria 25991
156 Ga0501080_0024562 3300049742 Bacteria 5587
157 Ga0501080_0110295 3300049742 Bacteria 2550
158 Ga0501080_0141039 3300049742 Bacteria 2228
159 Ga0501081_0056445 3300049743 Bacteria 2714
160 Ga0501081_0119757 3300049743 Bacteria 1874
161 Ga0501081_0275083 3300049743 Bacteria 1232
162 Ga0501083_0004371 3300049744 Bacteria 9959
163 Ga0501083_0043033 3300049744 Bacteria 3060
164 Ga0501035_0099422 3300049822 Bacteria 2554
165 Ga0501035_0155562 3300049822 Bacteria 1982
166 Ga0501044_0001520 3300049823 Bacteria 27213
167 Ga0501045_0039083 3300049824 Bacteria 3453
168 Ga0501045_0240950 3300049824 Bacteria 1346
169 Ga0501045_0297451 3300049824 Bacteria 1201
170 nmdc:mga03683_107193_c1 3300050489 Bacteria 1232
171 nmdc:mga03683_18046_c1 3300050489 Bacteria 2677
172 nmdc:mga03683_39230_c1 3300050489 Bacteria 1938
173 nmdc:mga00v17_19514_c1 3300050491 Bacteria 3871
174 nmdc:mga00v17_230151_c1 3300050491 Bacteria 1201
175 nmdc:mga00v17_62508_c1 3300050491 Bacteria 2291
176 nmdc:mga0yw44_3613_c1 3300050492 Bacteria 6898
177 nmdc:mga0yw44_49287_c1 3300050492 Bacteria 2541
178 nmdc:mga0yw44_5167_c1 3300050492 Bacteria 6114
179 nmdc:mga0yw44_69263_c1 3300050492 Bacteria 2185
180 nmdc:mga0yw44_91270_c1 3300050492 Bacteria 1925
181 nmdc:mga06z11_181287_c1 3300050494 Bacteria 1214
182 nmdc:mga06z11_29747_c1 3300050494 Bacteria 2634
183 nmdc:mga06z11_70519_c1 3300050494 Bacteria 1848
184 nmdc:mga05p37_636184_c1 3300050507 Bacteria 1197
185 Ga0495601_0107654 3300053077 Bacteria 1804
186 Ga0500635_0013626 3300053080 Bacteria 2366
187 Ga0500566_0000913 3300053094 Bacteria 16882
188 Ga0500641_0001935 3300053096 Bacteria 7346
189 Ga0500616_0013066 3300053153 Bacteria 4835
190 Ga0501084_0000396 3300054114 Bacteria 33489
191 Ga0501082_0037905 3300060353 Bacteria 4157
192 Ga0501082_0100719 3300060353 Bacteria 2499
193 Ga0501082_0133718 3300060353 Bacteria 2152
194 Ga0530510_0018336 3300061734 Bacteria 4963
195 Ga0530510_0082045 3300061734 Bacteria 2348
196 Ga0530510_0170251 3300061734 Bacteria 1613
197 Ga0530510_0364322 3300061734 Bacteria 1087
198 Ga0316576_10024406
199 Ga0070688_100170415
200 Ga0070705_100077109
201 Ga0070678_100213009
202 Ga0068867_100010660
203 Ga0070698_100020746
204 Ga0070695_100078822
205 Ga0068859_100174057
206 Ga0068859_100359675
207 Ga0068866_10020285
208 Ga0068863_100315044
209 Ga0068858_100011006
210 Ga0068860_100092925
211 Ga0068860_100195038
212 Ga0068862_100207631
213 Ga0068862_100243829
214 Ga0075365_10054549
215 Ga0075365_10101174
216 Ga0075363_100031664
217 Ga0075364_10011146
218 Ga0075364_10014679
219 Ga0075364_10066969
220 Ga0075364_10102639
221 Ga0075362_10014852
222 Ga0075362_10029589
223 Ga0075367_10023358
224 Ga0075367_10080017
225 Ga0075367_10180587
226 Ga0097621_100080730
227 Ga0075370_10107138
228 Ga0097620_100174056
229 Ga0097620_100359680
230 Ga0105245_10197109
231 Ga0105243_10082843
232 Ga0105242_10006519
233 Ga0105249_10208206
234 Ga0163162_10197475
235 Ga0163162_10473894
236 Ga0157375_10210126
237 Ga0157375_10403811
238 Ga0157375_10630613
239 Ga0163163_10095439
240 Ga0157380_10302322
241 Ga0157376_10294873
242 Ga0213876_10060323
243 Ga0207645_10130392
244 Ga0207645_10260688
245 Ga0207644_10433882
246 Ga0207686_10005926
247 Ga0207709_10006421
248 Ga0207670_10044192
249 Ga0207651_10109683
250 Ga0207668_10145120
251 Ga0207703_10007366
252 Ga0207703_10122204
253 Ga0207641_10205639
254 Ga0207648_10001932
255 Ga0207676_10297272
256 Ga0207675_100094662
257 Ga0207675_100109087
258 Ga0207675_100137480
259 Ga0207683_10118367
260 Ga0207683_10168388
261 Ga0207683_10193419
262 Ga0207683_10466351
263 Ga0209998_10000265
264 Ga0209974_10001987
265 Ga0268265_10059890
266 Ga0268265_10123072
267 Ga0268264_10096331
268 Ga0268264_10430674
269 Ga0316576_10002805
270 Ga0316576_10136369
271 Ga0316578_10034734
272 Ga0307409_100022486
273 Ga0307416_100404707
274 Ga0307411_10393632
275 Ga0316580_10036679
276 Ga0316588_1037644
277 Ga0316574_0036719
278 Ga0316574_0038551
279 Ga0316574_0071058
280 Ga0316582_0265453
281 Ga0316584_0023877
282 Ga0316584_0043407
283 Ga0316584_0173811
284 Ga0395905_0130685
285 Ga0400483_027049
286 Ga0400483_234291
287 Ga0400487_17155
288 Ga0436365_0282680
289 Ga0439434_0003602
290 Ga0451577_0015511
291 Ga0495629_0166503
292 Ga0495618_0142448
293 Ga0495630_0165431
294 Ga0495586_0010074
295 Ga0495613_0000657
296 Ga0495670_0082835
297 Ga0495672_0003668
298 Ga0495676_0144790
299 Ga0496101_0041089
300 Ga0496104_0018492
301 Ga0496107_0239675
302 Ga0496108_0425582
303 Ga0496109_0232126
304 Ga0496110_0023105
305 Ga0496110_0046894
306 Ga0496111_0102894
307 Ga0496111_0145774
308 Ga0496111_0241130
309 Ga0496114_0026909
310 Ga0501033_0010990
311 Ga0501034_0000888
312 Ga0501034_0007937
313 Ga0501034_0070882
314 Ga0501036_0071302
315 Ga0501037_0046043
316 Ga0501039_0023238
317 Ga0501039_0031949
318 Ga0501039_0033225
319 Ga0501039_0332366
320 Ga0501040_0065369
321 Ga0501040_0074321
322 Ga0501041_0024534
323 Ga0501041_0034771
324 Ga0501042_0161751
325 Ga0501047_0054747
326 Ga0501048_0119067
327 Ga0501048_0202289
328 Ga0501067_0019421
329 Ga0501067_0220216
330 Ga0501068_0000026
331 Ga0501068_0014256
332 Ga0501069_0188548
333 Ga0501070_0001583
334 Ga0501070_0101690
335 Ga0501071_0000981
336 Ga0501071_0025081
337 Ga0501071_0055983
338 Ga0501072_0011941
339 Ga0501072_0018012
340 Ga0501072_0192193
341 Ga0501072_0264545
342 Ga0501072_0370541
343 Ga0501073_0007074
344 Ga0501073_0012092
345 Ga0501074_0001393
346 Ga0501074_0030985
347 Ga0501074_0143780
348 Ga0501075_0051912
349 Ga0501075_0072661
350 Ga0501076_0168867
351 Ga0501079_0090000
352 Ga0501080_0000773
353 Ga0501080_0024562
354 Ga0501080_0110295
355 Ga0501080_0141039
356 Ga0501081_0056445
357 Ga0501081_0119757
358 Ga0501081_0275083
359 Ga0501083_0004371
360 Ga0501083_0043033
361 Ga0501035_0099422
362 Ga0501035_0155562
363 Ga0501044_0001520
364 Ga0501045_0039083
365 Ga0501045_0240950
366 Ga0501045_0297451
367 nmdc:mga03683_107193_c1
368 nmdc:mga03683_18046_c1
369 nmdc:mga03683_39230_c1
370 nmdc:mga00v17_19514_c1
371 nmdc:mga00v17_230151_c1
372 nmdc:mga00v17_62508_c1
373 nmdc:mga0yw44_3613_c1
374 nmdc:mga0yw44_49287_c1
375 nmdc:mga0yw44_5167_c1
376 nmdc:mga0yw44_69263_c1
377 nmdc:mga0yw44_91270_c1
378 nmdc:mga06z11_181287_c1
379 nmdc:mga06z11_29747_c1
380 nmdc:mga06z11_70519_c1
381 nmdc:mga05p37_636184_c1
382 Ga0495601_0107654
383 Ga0500635_0013626
384 Ga0500566_0000913
385 Ga0500641_0001935
386 Ga0500616_0013066
387 Ga0501084_0000396
388 Ga0501082_0037905
389 Ga0501082_0100719
390 Ga0501082_0133718
391 Ga0530510_0018336
392 Ga0530510_0082045
393 Ga0530510_0170251
394 Ga0530510_0364322

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

35

320

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2bhs-assembly2.cif.gz_C crystal structure of cysteine synthase b 0.9563 6 294
2v03-assembly1.cif.gz_A-2 high resolution structure and catalysis of an o-acetylserine sulfhydrylase 0.9557 4 294
2jc3-assembly3.cif.gz_F structure of o-acetylserine sulfhydrylase b from salmonella typhimurium 0.952 4 294
3fgp-assembly1.cif.gz_A 2.05 a crystal structure of cysm from mycobacterium tuberculosis - open and closed conformations 0.9478 3 304
2bht-assembly2.cif.gz_C crystal structure of o-acetylserine sulfhydrylase b 0.9449 4 294
ID Description Score Start End Superfamily
3rr2A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.963 46 142 3.40.50.1100
af_P16703_7_287_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9593 11 293 3.30.360.10
4airB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9562 38 142 3.40.50.1100
af_Q2G0V4_40_140_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9542 46 142 3.40.50.1100
3vc3B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.953 39 144 3.40.50.1100
ID Description Score Start End GO Terms
AF-A0A527YXL5-F1-model_v4 Pyridoxal-phosphate dependent enzyme 0.9719 44 117 GO:1901605
AF-X1NKG5-F1-model_v4 Tryptophan synthase beta chain-like PALP domain-containing protein 0.9717 6 132 GO:0006535
AF-A0A660VU20-F1-model_v4 Tryptophan synthase beta chain-like PALP domain-containing protein 0.9717 33 117 GO:0006534
GO:0009069
GO:0044272
AF-A0A7S1RX07-F1-model_v4 Tryptophan synthase beta chain-like PALP domain-containing protein 0.969 1 160
AF-A0A0S8BTQ6-F1-model_v4 Cysteine synthase 0.9677 1 116 GO:0006534
GO:0009069
GO:0044272

Map