F303194

General Info

Members Datasets Scaffolds Average Seq Length
197 133 395 928

Family's Representative Sequence

Representative Sequence 3300028794|Ga0307515_10001257|Ga0307515_1000125735
Length 1022
Sequence MSDAVFGLPGKGWKSLPPLNGCISLIRIIFGIQRASPSLNYYLFIAVFLFRIQHNFIFINLPVKLRVYSITKTAAMKLQKSLLLIVMIVLSSQFLFAQKPTISGKITDSKTGEPLSGVSVKNVSSKSGGTVTNKDGQFTIGAAAGDVLEISSVGFKTETVKVGSETTIAVNLTVATTELSEVVFVGSRGAARAKIETPVPVDIIKINQIGLPTAKMDLTSVLNYAAPSFNYNKQSGADGADHVDLGTLRGLGPDQTLVLINGKRRHQTAFVALFGTRGRGNSGVDLNAFPEAAVDRIEILRDGASAQYGSDAMAGVINIILKKDINHWTINTGWSGYYDTKNNARKFNAGNQYYSGNAIDGSTYSLSVNNGFAIGKNGGYINVSADFLRQGKTYRQADTTNPQLNKNSLVYINNGRRAFGDGSITTAGAMYNMEIPFSANGKTSFYSFGGYNYKSSDAFAYSRNYSAKPERFPTDAGGKLIFVGDIMRKSNDGEIYYNPHIQTHIKDISFAAGVKGDAGNGWGWDISNTIGRNDFHYYGDKTFNASLIGKSTPNHFDDGGFNFLQNTTNLDFNKSFKTVAEGLNLGLGAEFRYEKYAIYSGEELSYKNYDPNTVQASGSQGFPGFSNTDAVNANRTNFGVYADAALDITKEWLVDGAARFENYSDFGSVLTGKIATRYKLASNFNIRGSVSTGFRAPSLAQIHFSNTLTSFSGGQLVQSLIAPNTSAIARAAGIPDLKEETSVNGSLGFSWKPVKNFTFTVDGYIVKVKDRVVLSGLFSKDDPTLPPSFTNQFPTDVSTAQFFANAVSTTNTGIDIVADYSVKWRRNNLKILLAGNIQHIKIDDIHIPSALNDNKLHRKTFYSDREEAFLKASAPKGKWSLGLDYTKDKLGFGAHLTYYGKILLLGFGDGAAPDPNDPNSFDNPNYSGINPRVPSDADGSVYLPEEFNYNKKVTVDIYASYKISNKISLFVGADNVFNVHPNLGVNPLAKGYAQDNESGGPWDSVQMGFNGRRLFGKLAFNF

Samples

Sample ID Description Type Environment
1 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
91 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
94 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
110 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
111 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
115 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
116 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
117 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
118 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
119 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
120 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
121 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
125 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
126 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
127 2738541302 Pedobacter sp. CF074 Isolate Unclassified
128 2818991437 Pedobacter terrae 518 Isolate Unclassified
129 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
130 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
131 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
132 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
133 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.45
Metatranscriptomes 0
Isolates 3.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.08
Nodule 0
Rhizoplane 0
Rhizosphere 85.28
Stem 0
Stem Tuber 0
Unclassified 5.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307515_10001257 3300028794 Bacteria 57814
2 JGI24739J22299_10003287 3300001989 Bacteria 6164
3 JGI24735J21928_10000004 3300002067 Bacteria 381713
4 rootH1_10047327 3300003316 Bacteria 7043
5 rootH1_10047327 3300003323 Bacteria 9811
6 rootH2_10000063 3300003320 Bacteria 93226
7 rootL2_10026104 3300003322 Bacteria 4774
8 rootL2_10026376 3300003322 Bacteria 3891
9 rootH1_10284623 3300003323 Bacteria 3618
10 JGI25160J50197_1005758 3300003354 Bacteria 5110
11 Ga0055531_10000093 3300003794 Bacteria 97901
12 Ga0065714_10064545 3300005288 Bacteria 38585
13 Ga0065712_10076769 3300005290 Unclassified 3585
14 Ga0070683_100000711 3300005329 Bacteria 24242
15 Ga0070683_100066946 3300005329 Bacteria 3345
16 Ga0070690_100025545 3300005330 Bacteria 3637
17 Ga0070670_100050299 3300005331 Unclassified 3582
18 Ga0070666_10000055 3300005335 Bacteria 92269
19 Ga0070682_100000005 3300005337 Bacteria 386439
20 Ga0068868_100004427 3300005338 Bacteria 9853
21 Ga0070661_100009784 3300005344 Bacteria 6650
22 Ga0070668_100013041 3300005347 Bacteria 6191
23 Ga0070673_100056233 3300005364 Bacteria 3104
24 Ga0070688_100013549 3300005365 Unclassified 4603
25 Ga0070678_100010013 3300005456 Bacteria 5768
26 Ga0070678_100013125 3300005456 Bacteria 5180
27 Ga0070684_100001934 3300005535 Bacteria 15200
28 Ga0068853_100001245 3300005539 Bacteria 18191
29 Ga0068853_100012820 3300005539 Bacteria 6828
30 Ga0070686_100012034 3300005544 Bacteria 4920
31 Ga0070665_100000031 3300005548 Bacteria 333365
32 Ga0068855_100020125 3300005563 Bacteria 8014
33 Ga0068855_100050815 3300005563 Bacteria 4884
34 Ga0070664_100006250 3300005564 Bacteria 9618
35 Ga0070664_100019525 3300005564 Bacteria 5576
36 Ga0068857_100010197 3300005577 Bacteria 8168
37 Ga0068857_100031221 3300005577 Bacteria 4708
38 Ga0068856_100041491 3300005614 Unclassified 4523
39 Ga0068859_100000277 3300005617 Bacteria 51115
40 Ga0068859_100000522 3300005617 Bacteria 38186
41 Ga0068864_100005341 3300005618 Bacteria 10523
42 Ga0068861_100008085 3300005719 Bacteria 7234
43 Ga0068863_100002942 3300005841 Bacteria 16829
44 Ga0068858_100029964 3300005842 Bacteria 5054
45 Ga0068858_100046370 3300005842 Bacteria 4029
46 Ga0068860_100000072 3300005843 Bacteria 174997
47 Ga0068860_100002687 3300005843 Bacteria 18508
48 Ga0068860_100004912 3300005843 Bacteria 13623
49 Ga0068860_100012432 3300005843 Bacteria 8382
50 Ga0068862_100016149 3300005844 Bacteria 6210
51 Ga0097621_100000227 3300006237 Bacteria 37730
52 Ga0097621_100003992 3300006237 Bacteria 10223
53 Ga0097621_100008746 3300006237 Bacteria 7315
54 Ga0068871_100000661 3300006358 Bacteria 23685
55 Ga0068871_100058032 3300006358 Bacteria 3150
56 Ga0097620_100000277 3300006931 Bacteria 51115
57 Ga0097620_100000522 3300006931 Bacteria 38186
58 Ga0105240_10000208 3300009093 Bacteria 118950
59 Ga0105240_10000225 3300009093 Bacteria 112806
60 Ga0105240_10000319 3300009093 Bacteria 91429
61 Ga0105240_10012743 3300009093 Bacteria 11588
62 Ga0111539_10007178 3300009094 Bacteria 14282
63 Ga0114129_10059971 3300009147 Bacteria 5320
64 Ga0105241_10001565 3300009174 Bacteria 17507
65 Ga0105241_10046294 3300009174 Bacteria 3303
66 Ga0105242_10034659 3300009176 Bacteria 4047
67 Ga0105248_10013751 3300009177 Bacteria 8909
68 Ga0105237_10000128 3300009545 Bacteria 106338
69 Ga0105237_10001160 3300009545 Bacteria 35249
70 Ga0105237_10009930 3300009545 Bacteria 10155
71 Ga0105237_10016775 3300009545 Bacteria 7604
72 Ga0105237_10017261 3300009545 Bacteria 7484
73 Ga0105237_10043351 3300009545 Bacteria 4533
74 Ga0105238_10000788 3300009551 Bacteria 32863
75 Ga0105249_10039155 3300009553 Unclassified 4304
76 Ga0105239_10001192 3300010375 Bacteria 35572
77 Ga0105239_10002897 3300010375 Bacteria 21432
78 Ga0105239_10004608 3300010375 Bacteria 16413
79 Ga0105246_10003014 3300011119 Bacteria 10214
80 Ga0157371_10000016 3300013102 Bacteria 330495
81 Ga0157370_10000350 3300013104 Bacteria 58500
82 Ga0157369_10029012 3300013105 Bacteria 6118
83 Ga0157374_10000015 3300013296 Bacteria 296773
84 Ga0157374_10002504 3300013296 Bacteria 15509
85 Ga0157378_10005824 3300013297 Bacteria 10803
86 Ga0157378_10012178 3300013297 Bacteria 7531
87 Ga0157378_10033344 3300013297 Bacteria 4551
88 Ga0163162_10000167 3300013306 Bacteria 60620
89 Ga0163162_10000186 3300013306 Bacteria 57565
90 Ga0163162_10000903 3300013306 Bacteria 27662
91 Ga0163162_10000971 3300013306 Bacteria 26647
92 Ga0163162_10023561 3300013306 Bacteria 6077
93 Ga0163162_10052920 3300013306 Unclassified 4079
94 Ga0157372_10002020 3300013307 Bacteria 22055
95 Ga0157372_10005310 3300013307 Bacteria 13685
96 Ga0157375_10000379 3300013308 Bacteria 40546
97 Ga0157375_10002992 3300013308 Bacteria 14682
98 Ga0157375_10048742 3300013308 Bacteria 4146
99 Ga0163163_10001561 3300014325 Bacteria 19328
100 Ga0157380_10000841 3300014326 Bacteria 19222
101 Ga0157380_10002872 3300014326 Bacteria 11693
102 Ga0157379_10011716 3300014968 Bacteria 7656
103 Ga0157376_10001971 3300014969 Bacteria 13729
104 Ga0183373_1001 3300015682 Bacteria 1410374
105 Ga0163161_10007143 3300017792 Bacteria 7720
106 Ga0209130_1002428 3300025284 Bacteria 9362
107 Ga0207426_1000026 3300025302 Bacteria 515228
108 Ga0207426_1000134 3300025302 Bacteria 202226
109 Ga0209257_1000001 3300025304 Bacteria 2274655
110 Ga0207642_10007811 3300025899 Bacteria 3630
111 Ga0207680_10000021 3300025903 Bacteria 87712
112 Ga0207695_10000257 3300025913 Bacteria 134853
113 Ga0207695_10000643 3300025913 Bacteria 69314
114 Ga0207695_10027427 3300025913 Bacteria 6343
115 Ga0207695_10031557 3300025913 Bacteria 5808
116 Ga0207671_10000652 3300025914 Bacteria 45361
117 Ga0207671_10001523 3300025914 Bacteria 26590
118 Ga0207671_10001813 3300025914 Bacteria 23849
119 Ga0207681_10002188 3300025923 Bacteria 12454
120 Ga0207650_10025751 3300025925 Bacteria 4192
121 Ga0207690_10014621 3300025932 Bacteria 4742
122 Ga0207691_10052228 3300025940 Bacteria 3734
123 Ga0207711_10011961 3300025941 Bacteria 7214
124 Ga0207689_10006148 3300025942 Bacteria 10627
125 Ga0207689_10009168 3300025942 Bacteria 8560
126 Ga0207689_10010843 3300025942 Bacteria 7840
127 Ga0207679_10009336 3300025945 Bacteria 6281
128 Ga0207667_10042084 3300025949 Bacteria 4858
129 Ga0207658_10048765 3300025986 Bacteria 3107
130 Ga0207702_10029288 3300026078 Unclassified 4581
131 Ga0207641_10000442 3300026088 Bacteria 47467
132 Ga0207641_10028655 3300026088 Unclassified 4602
133 Ga0207648_10004206 3300026089 Bacteria 14872
134 Ga0207648_10014152 3300026089 Bacteria 7377
135 Ga0207674_10015260 3300026116 Bacteria 8448
136 Ga0207674_10029990 3300026116 Bacteria 5722
137 Ga0207674_10084152 3300026116 Unclassified 3179
138 Ga0207683_10001371 3300026121 Bacteria 22015
139 Ga0207683_10026686 3300026121 Bacteria 4988
140 Ga0207683_10037356 3300026121 Unclassified 4228
141 Ga0207698_10021381 3300026142 Bacteria 4474
142 Ga0268266_10000088 3300028379 Bacteria 199029
143 Ga0268264_10000201 3300028381 Bacteria 122060
144 Ga0268264_10002719 3300028381 Bacteria 15431
145 Ga0268264_10025472 3300028381 Bacteria 4833
146 Ga0307517_10000658 3300028786 Bacteria 59357
147 Ga0307517_10003207 3300028786 Bacteria 25691
148 Ga0307515_10000010 3300028794 Bacteria 651586
149 Ga0307511_10001223 3300030521 Bacteria 27242
150 Ga0265327_10000142 3300031251 Bacteria 157436
151 Ga0265327_10000239 3300031251 Bacteria 109804
152 Ga0307513_10101539 3300031456 Bacteria 2898
153 Ga0307508_10005934 3300031616 Bacteria 11521
154 Ga0307516_10002348 3300031730 Bacteria 25403
155 Ga0307510_10008151 3300033180 Bacteria 12477
156 Ga0395900_0024956 3300037418 Bacteria 6118
157 Ga0395905_0000496 3300037471 Bacteria 54071
158 Ga0395901_0003087 3300038443 Bacteria 16768
159 Ga0466957_0000084 3300044842 Bacteria 37711
160 Ga0466959_0000035 3300045049 Bacteria 108669
161 Ga0466959_0001824 3300045049 Bacteria 13362
162 Ga0495650_0000087 3300046471 Bacteria 234870
163 Ga0495585_0000448 3300046492 Bacteria 39402
164 Ga0495583_0022279 3300046506 Bacteria 3236
165 Ga0495606_0000052 3300046507 Bacteria 201529
166 Ga0495606_0003840 3300046507 Bacteria 15525
167 Ga0495610_0001217 3300046512 Bacteria 23162
168 Ga0495610_0002055 3300046512 Bacteria 17197
169 Ga0495616_0005861 3300046513 Bacteria 7497
170 Ga0495630_0016946 3300046517 Bacteria 5331
171 Ga0495631_0013959 3300046518 Bacteria 3885
172 Ga0495648_0001889 3300046524 Bacteria 20019
173 Ga0495633_0004826 3300046558 Bacteria 8450
174 Ga0495668_0000175 3300046616 Bacteria 95600
175 Ga0495634_0006373 3300046642 Bacteria 8974
176 Ga0495625_0000008 3300046660 Bacteria 536165
177 Ga0495625_0012525 3300046660 Bacteria 6867
178 Ga0495661_0004600 3300046665 Bacteria 9935
179 Ga0495649_0000018 3300046694 Bacteria 220586
180 Ga0495672_0022860 3300047320 Bacteria 4057
181 Ga0495683_0029454 3300047323 Bacteria 2806
182 Ga0495687_000010 3300047443 Bacteria 413735
183 Ga0495687_006084 3300047443 Bacteria 7504
184 Ga0495686_0001355 3300047472 Bacteria 27355
185 Ga0501241_000185 3300049758 Bacteria 14011
186 nmdc:mga05p37_48582_c1 3300050507 Bacteria 5218
187 nmdc:mga08y16_8251_c1 3300050511 Bacteria 10895
188 Ga0500616_0012871 3300053153 Bacteria 4877
189 Ga0500622_0001166 3300053156 Bacteria 21778
190 Ga0500622_0001305 3300053156 Bacteria 20258
191 Ga0500624_000894 3300053157 Bacteria 6383
192 2738851834 2738541302 Bacteria 5944758
193 2819546403 2818991437 Bacteria 5805520
194 2849285909 2849281842 Bacteria 6065644
195 2857631087 2857627736 Bacteria 5625397
196 2928080749 2928078545 Bacteria 6534839
197 2928150974 2928147474 Bacteria 6512076
198 2932082869 2932082852 Bacteria 6563563
199 Ga0307515_10001257
200 JGI24739J22299_10003287
201 JGI24735J21928_10000004
202 rootH1_10047327
203 rootH2_10000063
204 rootL2_10026104
205 rootL2_10026376
206 rootH1_10284623
207 JGI25160J50197_1005758
208 Ga0055531_10000093
209 Ga0065714_10064545
210 Ga0065712_10076769
211 Ga0070683_100000711
212 Ga0070683_100066946
213 Ga0070690_100025545
214 Ga0070670_100050299
215 Ga0070666_10000055
216 Ga0070682_100000005
217 Ga0068868_100004427
218 Ga0070661_100009784
219 Ga0070668_100013041
220 Ga0070673_100056233
221 Ga0070688_100013549
222 Ga0070678_100010013
223 Ga0070678_100013125
224 Ga0070684_100001934
225 Ga0068853_100001245
226 Ga0068853_100012820
227 Ga0070686_100012034
228 Ga0070665_100000031
229 Ga0068855_100020125
230 Ga0068855_100050815
231 Ga0070664_100006250
232 Ga0070664_100019525
233 Ga0068857_100010197
234 Ga0068857_100031221
235 Ga0068856_100041491
236 Ga0068859_100000277
237 Ga0068859_100000522
238 Ga0068864_100005341
239 Ga0068861_100008085
240 Ga0068863_100002942
241 Ga0068858_100029964
242 Ga0068858_100046370
243 Ga0068860_100000072
244 Ga0068860_100002687
245 Ga0068860_100004912
246 Ga0068860_100012432
247 Ga0068862_100016149
248 Ga0097621_100000227
249 Ga0097621_100003992
250 Ga0097621_100008746
251 Ga0068871_100000661
252 Ga0068871_100058032
253 Ga0097620_100000277
254 Ga0097620_100000522
255 Ga0105240_10000208
256 Ga0105240_10000225
257 Ga0105240_10000319
258 Ga0105240_10012743
259 Ga0111539_10007178
260 Ga0114129_10059971
261 Ga0105241_10001565
262 Ga0105241_10046294
263 Ga0105242_10034659
264 Ga0105248_10013751
265 Ga0105237_10000128
266 Ga0105237_10001160
267 Ga0105237_10009930
268 Ga0105237_10016775
269 Ga0105237_10017261
270 Ga0105237_10043351
271 Ga0105238_10000788
272 Ga0105249_10039155
273 Ga0105239_10001192
274 Ga0105239_10002897
275 Ga0105239_10004608
276 Ga0105246_10003014
277 Ga0157371_10000016
278 Ga0157370_10000350
279 Ga0157369_10029012
280 Ga0157374_10000015
281 Ga0157374_10002504
282 Ga0157378_10005824
283 Ga0157378_10012178
284 Ga0157378_10033344
285 Ga0163162_10000167
286 Ga0163162_10000186
287 Ga0163162_10000903
288 Ga0163162_10000971
289 Ga0163162_10023561
290 Ga0163162_10052920
291 Ga0157372_10002020
292 Ga0157372_10005310
293 Ga0157375_10000379
294 Ga0157375_10002992
295 Ga0157375_10048742
296 Ga0163163_10001561
297 Ga0157380_10000841
298 Ga0157380_10002872
299 Ga0157379_10011716
300 Ga0157376_10001971
301 Ga0183373_1001
302 Ga0163161_10007143
303 Ga0209130_1002428
304 Ga0207426_1000026
305 Ga0207426_1000134
306 Ga0209257_1000001
307 Ga0207642_10007811
308 Ga0207680_10000021
309 Ga0207695_10000257
310 Ga0207695_10000643
311 Ga0207695_10027427
312 Ga0207695_10031557
313 Ga0207671_10000652
314 Ga0207671_10001523
315 Ga0207671_10001813
316 Ga0207681_10002188
317 Ga0207650_10025751
318 Ga0207690_10014621
319 Ga0207691_10052228
320 Ga0207711_10011961
321 Ga0207689_10006148
322 Ga0207689_10009168
323 Ga0207689_10010843
324 Ga0207679_10009336
325 Ga0207667_10042084
326 Ga0207658_10048765
327 Ga0207702_10029288
328 Ga0207641_10000442
329 Ga0207641_10028655
330 Ga0207648_10004206
331 Ga0207648_10014152
332 Ga0207674_10015260
333 Ga0207674_10029990
334 Ga0207674_10084152
335 Ga0207683_10001371
336 Ga0207683_10026686
337 Ga0207683_10037356
338 Ga0207698_10021381
339 Ga0268266_10000088
340 Ga0268264_10000201
341 Ga0268264_10002719
342 Ga0268264_10025472
343 Ga0307517_10000658
344 Ga0307517_10003207
345 Ga0307515_10000010
346 Ga0307511_10001223
347 Ga0265327_10000142
348 Ga0265327_10000239
349 Ga0307513_10101539
350 Ga0307508_10005934
351 Ga0307516_10002348
352 Ga0307510_10008151
353 Ga0395900_0024956
354 Ga0395905_0000496
355 Ga0395901_0003087
356 Ga0466957_0000084
357 Ga0466959_0000035
358 Ga0466959_0001824
359 Ga0495650_0000087
360 Ga0495585_0000448
361 Ga0495583_0022279
362 Ga0495606_0000052
363 Ga0495606_0003840
364 Ga0495610_0001217
365 Ga0495610_0002055
366 Ga0495616_0005861
367 Ga0495630_0016946
368 Ga0495631_0013959
369 Ga0495648_0001889
370 Ga0495633_0004826
371 Ga0495668_0000175
372 Ga0495634_0006373
373 Ga0495625_0000008
374 Ga0495625_0012525
375 Ga0495661_0004600
376 Ga0495649_0000018
377 Ga0495672_0022860
378 Ga0495683_0029454
379 Ga0495687_000010
380 Ga0495687_006084
381 Ga0495686_0001355
382 Ga0501241_000185
383 nmdc:mga05p37_48582_c1
384 nmdc:mga08y16_8251_c1
385 Ga0500616_0012871
386 Ga0500622_0001166
387 Ga0500622_0001305
388 Ga0500624_000894
389 2738851834
390 2819546403
391 2849285909
392 2857631087
393 2928080749
394 2928150974
395 2932082869

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

193

316

0.94

PF13715

CarbopepD_reg_2

CarboxypepD_reg-like domain

102

184

0.86

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

101

175

0.83

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

450

976

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8525 26 97
3m8b-assembly1.cif.gz_A crystal structure of spin-labeled btub v10r1 in the apo state 0.8187 115 924
3m8b-assembly1.cif.gz_A crystal structure of spin-labeled btub v10r1 in the apo state 0.8019 115 924
5fp2-assembly1.cif.gz_A crystal structure of the siderophore receptor pira from pseudomonas aeruginosa 0.7981 124 924
3rgn-assembly1.cif.gz_A crystal structure of spin-labeled btub w371r1 0.7956 121 924
ID Description Score Start End Superfamily
af_E7FFQ7_717_794_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8567 26 98 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8462 26 97 2.60.40.1120
af_O54858_508_590_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8356 26 97 2.60.40.1120
af_Q22825_357_435_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8275 26 96 2.60.40.1120
af_D4A536_407_501_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8219 26 97 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A7M1T8J3-F1-model_v4 Carboxypeptidase-like regulatory domain-containing protein 0.938 23 97 GO:0004180
AF-A0A3D5ZYK6-F1-model_v4 deleted 0.9088 545 883
AF-A0A3D5ZYK6-F1-model_v4 deleted 0.906 545 883
AF-A0A0P9STU9-F1-model_v4 deleted 0.8993 474 922
AF-A0A6G0G0B7-F1-model_v4 deleted 0.8899 18 103

Map