F303155
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 197 | 135 | 190 | 623 |
Family's Representative Sequence
| Representative Sequence | 3300025981|Ga0207640_10017216|Ga0207640_100172163 |
| Length | 647 |
| Sequence | MDGRSIAAYLGGSLAGNDRDMKLVRGLWKLLVGIKDGLVLIAMLIFFAFLFMALSIKPNSVVPSSGALVLDLSGTLVEQPAETDPLSLLSGNRSLIHETRLRDLERALQTASTSTSIKAVVLDLDAFLGGEQAAIATAGKAIDKVRAAGKPVYAYATGYSDDGYQLASHATEVWLNPLGGVLLSGPGGSRLYYKGLMDKLGITAKIYRVGAFKSAVEPFIRNDQSPEARDANQALANSLWASWQADVARARPKARLAPYLARPDAMIAAAGGQMSQAALRAGLVDKLGDRNAFNSRVAAVAGDANDGGINDFKAIPLDRWVASHGEKSSGTPIGVLTVAGEIVDGEASPGSAGGSTISNLLLDELARKRIKALVVRVDSPGGSVMASEQIRSAILQAKGLGLPVVVSMGGVAASGGYWISTPADRIIADPSTVTGSIGVFGILPTFEGSLAKLGLSADGVKTTPMSGEPDLYRGTSPMFDAMMQGSINDIYRRFTGLVAQSRKLPIERVREIAEGRVWAGSTARQIGLVDRFGSVDDAVAEAARLARIDPGSVRPLYIEKPLSPWRQMIRSLVEPDQQDSDAARASGPWGAVAGRPDRILLHALAEAQHILTGPAIQVRCLECTAREPPPRPGDISAARALLAWATR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221541 | Sphingomonas sp. Root50 | Isolate | Unclassified |
| 2 | 2643221605 | Sphingomonas sp. Root710 | Isolate | Unclassified |
| 3 | 2643221606 | Sphingomonas sp. Root720 | Isolate | Unclassified |
| 4 | 2643221671 | Sphingomonas sp. Root1294 | Isolate | Unclassified |
| 5 | 2882806704 | Pelagerythrobacter rhizovicinus AY-3R | Isolate | Rhizosphere |
| 6 | 2885427238 | Sphingomonas mesophila SYSUP0001 | Isolate | Stem Tuber |
| 7 | 2896429255 | Sphingomonas rhizophila KACC 19189 | Isolate | Rhizosphere |
| 8 | 3300001976 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 | Metagenome | Rhizosphere |
| 9 | 3300002076 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 | Metagenome | Rhizosphere |
| 10 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 11 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 12 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 29 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 31 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 33 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 34 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 35 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 36 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 37 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 38 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 39 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 40 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 41 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 42 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300012513 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 | Metagenome | Rhizosphere |
| 51 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 56 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 57 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 94 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 95 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 96 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 97 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 98 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 99 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 100 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 101 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 102 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 103 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 104 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 105 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 106 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 112 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 113 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 114 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 115 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 116 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 117 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 122 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 123 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 124 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 127 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 128 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 129 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 130 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 131 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 132 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 133 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 134 | 3300053724 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere | Metagenome | Endosphere |
| 135 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.45 |
| Metatranscriptomes | 0 |
| Isolates | 3.55 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.09 |
| Nodule | 0 |
| Rhizoplane | 1.02 |
| Rhizosphere | 84.77 |
| Stem | 0 |
| Stem Tuber | 0.51 |
| Unclassified | 7.61 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24752J21851_1000039 | 3300001976 | Bacteria | 15608 |
| 2 | JGI24749J21850_1000088 | 3300002076 | Bacteria | 16529 |
| 3 | JGI24751J29686_10000002 | 3300002459 | Bacteria | 160619 |
| 4 | Ga0065715_10005882 | 3300005293 | Bacteria | 6936 |
| 5 | Ga0070658_10000013 | 3300005327 | Bacteria | 267776 |
| 6 | Ga0070676_10007321 | 3300005328 | Bacteria | 5921 |
| 7 | Ga0070670_100000012 | 3300005331 | Bacteria | 256314 |
| 8 | Ga0070670_100000030 | 3300005331 | Bacteria | 164211 |
| 9 | Ga0070670_100044294 | 3300005331 | Bacteria | 3826 |
| 10 | Ga0070677_10000958 | 3300005333 | Bacteria | 9321 |
| 11 | Ga0070660_100014730 | 3300005339 | Bacteria | 5640 |
| 12 | Ga0070661_100000222 | 3300005344 | Bacteria | 47111 |
| 13 | Ga0070668_100000004 | 3300005347 | Bacteria | 189408 |
| 14 | Ga0070668_100000803 | 3300005347 | Bacteria | 21639 |
| 15 | Ga0070669_100000041 | 3300005353 | Bacteria | 127426 |
| 16 | Ga0070671_100000014 | 3300005355 | Bacteria | 167986 |
| 17 | Ga0070671_100001714 | 3300005355 | Bacteria | 16642 |
| 18 | Ga0070674_100004684 | 3300005356 | Bacteria | 7819 |
| 19 | Ga0070659_100000029 | 3300005366 | Bacteria | 139518 |
| 20 | Ga0070659_100003780 | 3300005366 | Bacteria | 10802 |
| 21 | Ga0070659_100010481 | 3300005366 | Bacteria | 6820 |
| 22 | Ga0070667_100000037 | 3300005367 | Bacteria | 172343 |
| 23 | Ga0070667_100000045 | 3300005367 | Bacteria | 164821 |
| 24 | Ga0070667_100000161 | 3300005367 | Bacteria | 83551 |
| 25 | Ga0070663_100035463 | 3300005455 | Bacteria | 3462 |
| 26 | Ga0070678_100043836 | 3300005456 | Bacteria | 3190 |
| 27 | Ga0070679_100000001 | 3300005530 | Bacteria | 764811 |
| 28 | Ga0070672_100004572 | 3300005543 | Bacteria | 9058 |
| 29 | Ga0070686_100001142 | 3300005544 | Bacteria | 15252 |
| 30 | Ga0070665_100000154 | 3300005548 | Bacteria | 125835 |
| 31 | Ga0070665_100055526 | 3300005548 | Bacteria | 3972 |
| 32 | Ga0070665_100156574 | 3300005548 | Bacteria | 2280 |
| 33 | Ga0068855_100009958 | 3300005563 | Bacteria | 11462 |
| 34 | Ga0070664_100037864 | 3300005564 | Bacteria | 4056 |
| 35 | Ga0068857_100011545 | 3300005577 | Bacteria | 7686 |
| 36 | Ga0068859_100002535 | 3300005617 | Bacteria | 18536 |
| 37 | Ga0068864_100000010 | 3300005618 | Bacteria | 358723 |
| 38 | Ga0068864_100000041 | 3300005618 | Bacteria | 165878 |
| 39 | Ga0068864_100001584 | 3300005618 | Bacteria | 18729 |
| 40 | Ga0068861_100017695 | 3300005719 | Bacteria | 5065 |
| 41 | Ga0068861_100017965 | 3300005719 | Bacteria | 5029 |
| 42 | Ga0068863_100000035 | 3300005841 | Bacteria | 165877 |
| 43 | Ga0068863_100000040 | 3300005841 | Bacteria | 158465 |
| 44 | Ga0068863_100007912 | 3300005841 | Bacteria | 10393 |
| 45 | Ga0068863_100024040 | 3300005841 | Bacteria | 5815 |
| 46 | Ga0068858_100003993 | 3300005842 | Bacteria | 14556 |
| 47 | Ga0068860_100000002 | 3300005843 | Bacteria | 627849 |
| 48 | Ga0068860_100000073 | 3300005843 | Bacteria | 173235 |
| 49 | Ga0068860_100134476 | 3300005843 | Bacteria | 2374 |
| 50 | Ga0068862_100000016 | 3300005844 | Bacteria | 250031 |
| 51 | Ga0068862_100000042 | 3300005844 | Bacteria | 165084 |
| 52 | Ga0068862_100008434 | 3300005844 | Bacteria | 8526 |
| 53 | Ga0075366_10026770 | 3300006195 | Bacteria | 3379 |
| 54 | Ga0075431_100027458 | 3300006847 | Bacteria | 5840 |
| 55 | Ga0097620_100002535 | 3300006931 | Bacteria | 18536 |
| 56 | Ga0105251_10000165 | 3300009011 | Bacteria | 68081 |
| 57 | Ga0111539_10103687 | 3300009094 | Bacteria | 3338 |
| 58 | Ga0105245_10071651 | 3300009098 | Bacteria | 3147 |
| 59 | Ga0105247_10004564 | 3300009101 | Bacteria | 8828 |
| 60 | Ga0105248_10000045 | 3300009177 | Bacteria | 165909 |
| 61 | Ga0105248_10000053 | 3300009177 | Bacteria | 143972 |
| 62 | Ga0105238_10017403 | 3300009551 | Bacteria | 7303 |
| 63 | Ga0105249_10000055 | 3300009553 | Bacteria | 161674 |
| 64 | Ga0105249_10003121 | 3300009553 | Bacteria | 14322 |
| 65 | Ga0105249_10047813 | 3300009553 | Bacteria | 3899 |
| 66 | Ga0157326_1001309 | 3300012513 | Bacteria | 2756 |
| 67 | Ga0157369_10034503 | 3300013105 | Bacteria | 5552 |
| 68 | Ga0163163_10039009 | 3300014325 | Bacteria | 4633 |
| 69 | Ga0157380_10000593 | 3300014326 | Bacteria | 22298 |
| 70 | Ga0157380_10007774 | 3300014326 | Bacteria | 7630 |
| 71 | Ga0157380_10010015 | 3300014326 | Bacteria | 6804 |
| 72 | Ga0163161_10022594 | 3300017792 | Bacteria | 4430 |
| 73 | Ga0163161_10024344 | 3300017792 | Bacteria | 4276 |
| 74 | Ga0213873_10000017 | 3300021358 | Bacteria | 123962 |
| 75 | Ga0213876_10000071 | 3300021384 | Bacteria | 123962 |
| 76 | Ga0213876_10008261 | 3300021384 | Bacteria | 5632 |
| 77 | Ga0207697_10007663 | 3300025315 | Bacteria | 4790 |
| 78 | Ga0207713_1001365 | 3300025735 | Bacteria | 19850 |
| 79 | Ga0207682_10004466 | 3300025893 | Bacteria | 5846 |
| 80 | Ga0207710_10002325 | 3300025900 | Bacteria | 8882 |
| 81 | Ga0207705_10000002 | 3300025909 | Bacteria | 2046852 |
| 82 | Ga0207695_10139723 | 3300025913 | Bacteria | 2372 |
| 83 | Ga0207660_10036896 | 3300025917 | Bacteria | 3401 |
| 84 | Ga0207657_10001718 | 3300025919 | Bacteria | 23607 |
| 85 | Ga0207649_10000218 | 3300025920 | Bacteria | 47072 |
| 86 | Ga0207652_10000003 | 3300025921 | Bacteria | 502441 |
| 87 | Ga0207681_10000013 | 3300025923 | Bacteria | 357411 |
| 88 | Ga0207650_10000008 | 3300025925 | Bacteria | 498534 |
| 89 | Ga0207650_10000111 | 3300025925 | Bacteria | 107416 |
| 90 | Ga0207650_10019695 | 3300025925 | Bacteria | 4745 |
| 91 | Ga0207659_10018210 | 3300025926 | Bacteria | 4601 |
| 92 | Ga0207644_10000030 | 3300025931 | Bacteria | 136272 |
| 93 | Ga0207644_10000595 | 3300025931 | Bacteria | 23038 |
| 94 | Ga0207690_10004910 | 3300025932 | Bacteria | 7890 |
| 95 | Ga0207690_10009466 | 3300025932 | Bacteria | 5786 |
| 96 | Ga0207669_10044107 | 3300025937 | Bacteria | 2617 |
| 97 | Ga0207691_10001140 | 3300025940 | Bacteria | 26349 |
| 98 | Ga0207711_10000027 | 3300025941 | Bacteria | 236548 |
| 99 | Ga0207711_10002941 | 3300025941 | Bacteria | 14896 |
| 100 | Ga0207667_10000670 | 3300025949 | Bacteria | 44352 |
| 101 | Ga0207712_10000131 | 3300025961 | Bacteria | 79015 |
| 102 | Ga0207668_10000213 | 3300025972 | Bacteria | 39220 |
| 103 | Ga0207668_10000256 | 3300025972 | Bacteria | 35517 |
| 104 | Ga0207668_10021015 | 3300025972 | Bacteria | 4157 |
| 105 | Ga0207640_10017216 | 3300025981 | Bacteria | 4223 |
| 106 | Ga0207658_10000002 | 3300025986 | Bacteria | 1364188 |
| 107 | Ga0207658_10000025 | 3300025986 | Bacteria | 182470 |
| 108 | Ga0207658_10000238 | 3300025986 | Bacteria | 57993 |
| 109 | Ga0207677_10000080 | 3300026023 | Bacteria | 79544 |
| 110 | Ga0207703_10003006 | 3300026035 | Bacteria | 14301 |
| 111 | Ga0207639_10021424 | 3300026041 | Bacteria | 4642 |
| 112 | Ga0207678_10052422 | 3300026067 | Bacteria | 3520 |
| 113 | Ga0207702_10055299 | 3300026078 | Bacteria | 3366 |
| 114 | Ga0207641_10000039 | 3300026088 | Bacteria | 199453 |
| 115 | Ga0207641_10000041 | 3300026088 | Bacteria | 191595 |
| 116 | Ga0207641_10000818 | 3300026088 | Bacteria | 33059 |
| 117 | Ga0207641_10001290 | 3300026088 | Bacteria | 24911 |
| 118 | Ga0207641_10007071 | 3300026088 | Bacteria | 9373 |
| 119 | Ga0207648_10036081 | 3300026089 | Bacteria | 4356 |
| 120 | Ga0207676_10000012 | 3300026095 | Bacteria | 353971 |
| 121 | Ga0207676_10000039 | 3300026095 | Bacteria | 171142 |
| 122 | Ga0207676_10004951 | 3300026095 | Bacteria | 9441 |
| 123 | Ga0207675_100002574 | 3300026118 | Bacteria | 17960 |
| 124 | Ga0207675_100005093 | 3300026118 | Bacteria | 12647 |
| 125 | Ga0207683_10028776 | 3300026121 | Bacteria | 4807 |
| 126 | Ga0268266_10000093 | 3300028379 | Bacteria | 191879 |
| 127 | Ga0268265_10000006 | 3300028380 | Bacteria | 466482 |
| 128 | Ga0268265_10000061 | 3300028380 | Bacteria | 148625 |
| 129 | Ga0268265_10000323 | 3300028380 | Bacteria | 52384 |
| 130 | Ga0268265_10045087 | 3300028380 | Bacteria | 3288 |
| 131 | Ga0268264_10000001 | 3300028381 | Bacteria | 1221000 |
| 132 | Ga0268264_10000120 | 3300028381 | Bacteria | 191138 |
| 133 | Ga0268264_10001598 | 3300028381 | Bacteria | 20964 |
| 134 | Ga0268264_10059057 | 3300028381 | Bacteria | 3213 |
| 135 | Ga0307405_10000204 | 3300031731 | Bacteria | 21623 |
| 136 | Ga0307405_10022368 | 3300031731 | Bacteria | 3574 |
| 137 | Ga0307405_10068492 | 3300031731 | Bacteria | 2271 |
| 138 | Ga0307413_10002449 | 3300031824 | Bacteria | 7547 |
| 139 | Ga0307413_10010006 | 3300031824 | Bacteria | 4572 |
| 140 | Ga0307413_10011865 | 3300031824 | Bacteria | 4307 |
| 141 | Ga0307413_10021768 | 3300031824 | Bacteria | 3440 |
| 142 | Ga0307410_10015008 | 3300031852 | Bacteria | 4581 |
| 143 | Ga0307406_10049625 | 3300031901 | Bacteria | 2656 |
| 144 | Ga0307407_10071266 | 3300031903 | Bacteria | 2069 |
| 145 | Ga0307412_10018574 | 3300031911 | Bacteria | 4188 |
| 146 | Ga0307409_100005447 | 3300031995 | Bacteria | 7328 |
| 147 | Ga0307409_100014012 | 3300031995 | Bacteria | 5192 |
| 148 | Ga0307414_10028034 | 3300032004 | Bacteria | 3647 |
| 149 | Ga0307414_10075538 | 3300032004 | Bacteria | 2446 |
| 150 | Ga0307411_10010323 | 3300032005 | Bacteria | 4971 |
| 151 | Ga0307411_10049473 | 3300032005 | Bacteria | 2731 |
| 152 | Ga0307415_100101949 | 3300032126 | Bacteria | 2107 |
| 153 | Ga0436365_0313787 | 3300039437 | Bacteria | 7001 |
| 154 | Ga0436365_1132769 | 3300039437 | Bacteria | 4873 |
| 155 | Ga0436365_1202634 | 3300039437 | Bacteria | 25883 |
| 156 | Ga0436362_0199967 | 3300039453 | Bacteria | 28994 |
| 157 | Ga0451576_0000393 | 3300045051 | Bacteria | 101814 |
| 158 | Ga0495663_0013865 | 3300046525 | Bacteria | 2254 |
| 159 | Ga0495597_0010099 | 3300046542 | Bacteria | 4630 |
| 160 | Ga0495633_0043476 | 3300046558 | Bacteria | 2132 |
| 161 | Ga0495670_0019531 | 3300046691 | Bacteria | 3339 |
| 162 | Ga0495686_0035141 | 3300047472 | Bacteria | 3224 |
| 163 | Ga0496102_0001154 | 3300048905 | Bacteria | 24131 |
| 164 | Ga0496103_0000736 | 3300048906 | Bacteria | 24121 |
| 165 | Ga0496116_0006054 | 3300048919 | Bacteria | 11066 |
| 166 | Ga0496117_0000072 | 3300048920 | Bacteria | 238366 |
| 167 | Ga0496117_0032017 | 3300048920 | Bacteria | 4005 |
| 168 | Ga0496118_0000030 | 3300048921 | Bacteria | 339946 |
| 169 | Ga0496118_0000297 | 3300048921 | Bacteria | 86454 |
| 170 | Ga0496124_0000061 | 3300048927 | Bacteria | 238225 |
| 171 | Ga0501043_0004097 | 3300049579 | Bacteria | 11901 |
| 172 | Ga0501047_0001134 | 3300049581 | Bacteria | 26429 |
| 173 | Ga0501048_0052846 | 3300049582 | Bacteria | 2891 |
| 174 | Ga0501070_0020872 | 3300049586 | Bacteria | 5495 |
| 175 | Ga0501223_000022 | 3300049663 | Bacteria | 65110 |
| 176 | Ga0501257_000103 | 3300049686 | Bacteria | 19988 |
| 177 | Ga0501225_0000061 | 3300049705 | Bacteria | 35280 |
| 178 | Ga0501035_0094188 | 3300049822 | Bacteria | 2634 |
| 179 | nmdc:mga06r32_27537_c1 | 3300050510 | Bacteria | 5311 |
| 180 | Ga0500643_002263 | 3300053087 | Bacteria | 10111 |
| 181 | Ga0500643_009406 | 3300053087 | Bacteria | 3738 |
| 182 | Ga0500651_0004275 | 3300053093 | Bacteria | 7979 |
| 183 | Ga0500559_0019716 | 3300053136 | Bacteria | 2850 |
| 184 | Ga0500568_0019565 | 3300053139 | Bacteria | 2940 |
| 185 | Ga0500590_007672 | 3300053148 | Bacteria | 5351 |
| 186 | Ga0500604_0000017 | 3300053151 | Bacteria | 82010 |
| 187 | Ga0500616_0003013 | 3300053153 | Bacteria | 13278 |
| 188 | Ga0500624_000026 | 3300053157 | Bacteria | 109681 |
| 189 | Ga0500570_000688 | 3300053724 | Bacteria | 13841 |
| 190 | Ga0500661_001380 | 3300055283 | Bacteria | 4527 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046558 | Ga0495633_0043476 | Ga0495633_0043476_520_2115 | 517 |
| 2 | 3300006195 | Ga0075366_10026770 | Ga0075366_100267703 | 576 |
| 3 | 3300047472 | Ga0495686_0035141 | Ga0495686_0035141_679_2562 | 593 |
| 4 | 3300049686 | Ga0501257_000103 | Ga0501257_000103_17068_18942 | 598 |
| 5 | 3300031824 | Ga0307413_10011865 | Ga0307413_100118653 | 600 |
| 6 | 3300031903 | Ga0307407_10071266 | Ga0307407_100712661 | 600 |
| 7 | 3300032005 | Ga0307411_10010323 | Ga0307411_100103234 | 607 |
| 8 | 3300053093 | Ga0500651_0004275 | Ga0500651_0004275_572_2494 | 608 |
| 9 | 3300053148 | Ga0500590_007672 | Ga0500590_007672_976_2898 | 608 |
| 10 | 3300005548 | Ga0070665_100000154 | Ga0070665_10000015468 | 610 |
| 11 | 3300028379 | Ga0268266_10000093 | Ga0268266_10000093116 | 610 |
| 12 | 3300039437 | Ga0436365_1132769 | Ga0436365_1132769_2331_4205 | 611 |
| 13 | 3300028381 | Ga0268264_10059057 | Ga0268264_100590573 | 612 |
| 14 | 3300046691 | Ga0495670_0019531 | Ga0495670_0019531_1258_3138 | 612 |
| 15 | 3300053087 | Ga0500643_002263 | Ga0500643_002263_944_2824 | 612 |
| 16 | 3300053136 | Ga0500559_0019716 | Ga0500559_0019716_13_1893 | 612 |
| 17 | 3300055283 | Ga0500661_001380 | Ga0500661_001380_1257_3137 | 612 |
| 18 | 3300005548 | Ga0070665_100156574 | Ga0070665_1001565742 | 613 |
| 19 | 3300009098 | Ga0105245_10071651 | Ga0105245_100716513 | 613 |
| 20 | iso_pu_bacteria | 2885427238 | 2885427537 | 613 |
| 21 | 3300031901 | Ga0307406_10049625 | Ga0307406_100496252 | 614 |
| 22 | 3300002076 | JGI24749J21850_1000088 | JGI24749J21850_10000889 | 615 |
| 23 | 3300002459 | JGI24751J29686_10000002 | JGI24751J29686_1000000296 | 615 |
| 24 | 3300005331 | Ga0070670_100000012 | Ga0070670_100000012104 | 615 |
| 25 | 3300005344 | Ga0070661_100000222 | Ga0070661_1000002229 | 615 |
| 26 | 3300005347 | Ga0070668_100000803 | Ga0070668_10000080316 | 615 |
| 27 | 3300005353 | Ga0070669_100000041 | Ga0070669_1000000414 | 615 |
| 28 | 3300005355 | Ga0070671_100001714 | Ga0070671_10000171411 | 615 |
| 29 | 3300005544 | Ga0070686_100001142 | Ga0070686_1000011429 | 615 |
| 30 | 3300005548 | Ga0070665_100055526 | Ga0070665_1000555262 | 615 |
| 31 | 3300005617 | Ga0068859_100002535 | Ga0068859_1000025357 | 615 |
| 32 | 3300005618 | Ga0068864_100000010 | Ga0068864_100000010200 | 615 |
| 33 | 3300005719 | Ga0068861_100017965 | Ga0068861_1000179652 | 615 |
| 34 | 3300005841 | Ga0068863_100000040 | Ga0068863_100000040151 | 615 |
| 35 | 3300005843 | Ga0068860_100134476 | Ga0068860_1001344761 | 615 |
| 36 | 3300005844 | Ga0068862_100000016 | Ga0068862_10000001697 | 615 |
| 37 | 3300006931 | Ga0097620_100002535 | Ga0097620_1000025357 | 615 |
| 38 | 3300009177 | Ga0105248_10000053 | Ga0105248_1000005346 | 615 |
| 39 | 3300009553 | Ga0105249_10003121 | Ga0105249_1000312110 | 615 |
| 40 | 3300014325 | Ga0163163_10039009 | Ga0163163_100390093 | 615 |
| 41 | 3300014326 | Ga0157380_10000593 | Ga0157380_100005933 | 615 |
| 42 | 3300017792 | Ga0163161_10022594 | Ga0163161_100225943 | 615 |
| 43 | 3300025920 | Ga0207649_10000218 | Ga0207649_1000021836 | 615 |
| 44 | 3300025923 | Ga0207681_10000013 | Ga0207681_10000013186 | 615 |
| 45 | 3300025925 | Ga0207650_10000008 | Ga0207650_10000008267 | 615 |
| 46 | 3300025931 | Ga0207644_10000595 | Ga0207644_1000059516 | 615 |
| 47 | 3300025941 | Ga0207711_10002941 | Ga0207711_100029416 | 615 |
| 48 | 3300025972 | Ga0207668_10000213 | Ga0207668_100002133 | 615 |
| 49 | 3300026088 | Ga0207641_10000039 | Ga0207641_1000003939 | 615 |
| 50 | 3300026095 | Ga0207676_10000012 | Ga0207676_10000012130 | 615 |
| 51 | 3300026118 | Ga0207675_100002574 | Ga0207675_1000025746 | 615 |
| 52 | 3300028380 | Ga0268265_10000006 | Ga0268265_10000006297 | 615 |
| 53 | 3300028381 | Ga0268264_10001598 | Ga0268264_1000159817 | 615 |
| 54 | 3300032126 | Ga0307415_100101949 | Ga0307415_1001019492 | 615 |
| 55 | iso_pu_bacteria | 2896429255 | 2896431164 | 615 |
| 56 | 3300005530 | Ga0070679_100000001 | Ga0070679_100000001764 | 616 |
| 57 | 3300025917 | Ga0207660_10036896 | Ga0207660_100368962 | 616 |
| 58 | 3300025921 | Ga0207652_10000003 | Ga0207652_10000003358 | 616 |
| 59 | 3300049663 | Ga0501223_000022 | Ga0501223_000022_49679_51565 | 616 |
| 60 | 3300049705 | Ga0501225_0000061 | Ga0501225_0000061_13529_15415 | 616 |
| 61 | iso_pu_bacteria | 2882806704 | 2882807074 | 616 |
| 62 | 3300031824 | Ga0307413_10002449 | Ga0307413_100024493 | 618 |
| 63 | 3300031852 | Ga0307410_10015008 | Ga0307410_100150082 | 618 |
| 64 | 3300031995 | Ga0307409_100014012 | Ga0307409_1000140122 | 618 |
| 65 | 3300032004 | Ga0307414_10028034 | Ga0307414_100280342 | 618 |
| 66 | 3300032005 | Ga0307411_10049473 | Ga0307411_100494732 | 618 |
| 67 | 3300046525 | Ga0495663_0013865 | Ga0495663_0013865_355_2220 | 618 |
| 68 | 3300046542 | Ga0495597_0010099 | Ga0495597_0010099_1342_3264 | 618 |
| 69 | 3300053724 | Ga0500570_000688 | Ga0500570_000688_1582_3504 | 618 |
| 70 | 3300006847 | Ga0075431_100027458 | Ga0075431_1000274584 | 619 |
| 71 | 3300014326 | Ga0157380_10010015 | Ga0157380_100100155 | 619 |
| 72 | 3300050510 | nmdc:mga06r32_27537_c1 | nmdc:mga06r32_27537_c1_1232_3100 | 619 |
| 73 | iso_pu_bacteria | 2643221541 | 2643727674 | 619 |
| 74 | iso_pu_bacteria | 2643221605 | 2644037293 | 619 |
| 75 | iso_pu_bacteria | 2643221606 | 2644041167 | 619 |
| 76 | iso_pu_bacteria | 2643221671 | 2644394706 | 619 |
| 77 | 3300005293 | Ga0065715_10005882 | Ga0065715_100058822 | 620 |
| 78 | 3300005328 | Ga0070676_10007321 | Ga0070676_100073214 | 620 |
| 79 | 3300005331 | Ga0070670_100044294 | Ga0070670_1000442943 | 620 |
| 80 | 3300005356 | Ga0070674_100004684 | Ga0070674_1000046844 | 620 |
| 81 | 3300005455 | Ga0070663_100035463 | Ga0070663_1000354632 | 620 |
| 82 | 3300005456 | Ga0070678_100043836 | Ga0070678_1000438361 | 620 |
| 83 | 3300005543 | Ga0070672_100004572 | Ga0070672_1000045725 | 620 |
| 84 | 3300005564 | Ga0070664_100037864 | Ga0070664_1000378642 | 620 |
| 85 | 3300009094 | Ga0111539_10103687 | Ga0111539_101036872 | 620 |
| 86 | 3300014326 | Ga0157380_10007774 | Ga0157380_100077745 | 620 |
| 87 | 3300017792 | Ga0163161_10024344 | Ga0163161_100243444 | 620 |
| 88 | 3300025315 | Ga0207697_10007663 | Ga0207697_100076632 | 620 |
| 89 | 3300025893 | Ga0207682_10004466 | Ga0207682_100044663 | 620 |
| 90 | 3300025925 | Ga0207650_10019695 | Ga0207650_100196953 | 620 |
| 91 | 3300025926 | Ga0207659_10018210 | Ga0207659_100182103 | 620 |
| 92 | 3300025937 | Ga0207669_10044107 | Ga0207669_100441072 | 620 |
| 93 | 3300025940 | Ga0207691_10001140 | Ga0207691_100011403 | 620 |
| 94 | 3300026067 | Ga0207678_10052422 | Ga0207678_100524222 | 620 |
| 95 | 3300026089 | Ga0207648_10036081 | Ga0207648_100360812 | 620 |
| 96 | 3300026118 | Ga0207675_100005093 | Ga0207675_1000050937 | 620 |
| 97 | 3300026121 | Ga0207683_10028776 | Ga0207683_100287764 | 620 |
| 98 | 3300028380 | Ga0268265_10045087 | Ga0268265_100450872 | 620 |
| 99 | 3300031731 | Ga0307405_10000204 | Ga0307405_100002047 | 620 |
| 100 | 3300031731 | Ga0307405_10068492 | Ga0307405_100684922 | 620 |
| 101 | 3300031824 | Ga0307413_10010006 | Ga0307413_100100062 | 620 |
| 102 | 3300031824 | Ga0307413_10021768 | Ga0307413_100217681 | 620 |
| 103 | 3300031995 | Ga0307409_100005447 | Ga0307409_1000054474 | 620 |
| 104 | 3300032004 | Ga0307414_10075538 | Ga0307414_100755382 | 620 |
| 105 | 3300045051 | Ga0451576_0000393 | Ga0451576_0000393_59403_61307 | 621 |
| 106 | 3300005333 | Ga0070677_10000958 | Ga0070677_100009588 | 622 |
| 107 | 3300005563 | Ga0068855_100009958 | Ga0068855_1000099583 | 622 |
| 108 | 3300009551 | Ga0105238_10017403 | Ga0105238_100174036 | 622 |
| 109 | 3300021358 | Ga0213873_10000017 | Ga0213873_1000001715 | 622 |
| 110 | 3300021384 | Ga0213876_10000071 | Ga0213876_10000071122 | 622 |
| 111 | 3300025913 | Ga0207695_10139723 | Ga0207695_101397232 | 622 |
| 112 | 3300025949 | Ga0207667_10000670 | Ga0207667_1000067044 | 622 |
| 113 | 3300026078 | Ga0207702_10055299 | Ga0207702_100552991 | 622 |
| 114 | 3300039437 | Ga0436365_0313787 | Ga0436365_0313787_1873_3747 | 622 |
| 115 | 3300039453 | Ga0436362_0199967 | Ga0436362_0199967_15329_17203 | 622 |
| 116 | 3300048905 | Ga0496102_0001154 | Ga0496102_0001154_1390_3306 | 622 |
| 117 | 3300048906 | Ga0496103_0000736 | Ga0496103_0000736_1380_3296 | 622 |
| 118 | 3300048919 | Ga0496116_0006054 | Ga0496116_0006054_1024_2940 | 622 |
| 119 | 3300048920 | Ga0496117_0000072 | Ga0496117_0000072_1402_3318 | 622 |
| 120 | 3300048921 | Ga0496118_0000030 | Ga0496118_0000030_235049_236965 | 622 |
| 121 | 3300048927 | Ga0496124_0000061 | Ga0496124_0000061_235049_236965 | 622 |
| 122 | 3300053139 | Ga0500568_0019565 | Ga0500568_0019565_96_1979 | 622 |
| 123 | 3300053151 | Ga0500604_0000017 | Ga0500604_0000017_962_2845 | 622 |
| 124 | 3300053153 | Ga0500616_0003013 | Ga0500616_0003013_1038_2921 | 622 |
| 125 | 3300005327 | Ga0070658_10000013 | Ga0070658_1000001345 | 623 |
| 126 | 3300005339 | Ga0070660_100014730 | Ga0070660_1000147305 | 623 |
| 127 | 3300005347 | Ga0070668_100000004 | Ga0070668_10000000476 | 623 |
| 128 | 3300005355 | Ga0070671_100000014 | Ga0070671_100000014127 | 623 |
| 129 | 3300005366 | Ga0070659_100000029 | Ga0070659_100000029111 | 623 |
| 130 | 3300005366 | Ga0070659_100003780 | Ga0070659_1000037803 | 623 |
| 131 | 3300005366 | Ga0070659_100010481 | Ga0070659_1000104811 | 623 |
| 132 | 3300005367 | Ga0070667_100000037 | Ga0070667_10000003772 | 623 |
| 133 | 3300005367 | Ga0070667_100000045 | Ga0070667_10000004587 | 623 |
| 134 | 3300005577 | Ga0068857_100011545 | Ga0068857_1000115456 | 623 |
| 135 | 3300005618 | Ga0068864_100001584 | Ga0068864_10000158411 | 623 |
| 136 | 3300005719 | Ga0068861_100017695 | Ga0068861_1000176954 | 623 |
| 137 | 3300005841 | Ga0068863_100007912 | Ga0068863_1000079128 | 623 |
| 138 | 3300005841 | Ga0068863_100024040 | Ga0068863_1000240404 | 623 |
| 139 | 3300005842 | Ga0068858_100003993 | Ga0068858_10000399311 | 623 |
| 140 | 3300005843 | Ga0068860_100000002 | Ga0068860_100000002534 | 623 |
| 141 | 3300005843 | Ga0068860_100000073 | Ga0068860_10000007386 | 623 |
| 142 | 3300005844 | Ga0068862_100008434 | Ga0068862_1000084344 | 623 |
| 143 | 3300009553 | Ga0105249_10047813 | Ga0105249_100478133 | 623 |
| 144 | 3300012513 | Ga0157326_1001309 | Ga0157326_10013093 | 623 |
| 145 | 3300025909 | Ga0207705_10000002 | Ga0207705_10000002537 | 623 |
| 146 | 3300025919 | Ga0207657_10001718 | Ga0207657_1000171811 | 623 |
| 147 | 3300025931 | Ga0207644_10000030 | Ga0207644_1000003045 | 623 |
| 148 | 3300025932 | Ga0207690_10004910 | Ga0207690_100049107 | 623 |
| 149 | 3300025932 | Ga0207690_10009466 | Ga0207690_100094666 | 623 |
| 150 | 3300025972 | Ga0207668_10000256 | Ga0207668_1000025631 | 623 |
| 151 | 3300025972 | Ga0207668_10021015 | Ga0207668_100210155 | 623 |
| 152 | 3300025981 | Ga0207640_10017216 | Ga0207640_100172163 | 623 |
| 153 | 3300025986 | Ga0207658_10000002 | Ga0207658_10000002817 | 623 |
| 154 | 3300025986 | Ga0207658_10000025 | Ga0207658_1000002574 | 623 |
| 155 | 3300026023 | Ga0207677_10000080 | Ga0207677_1000008039 | 623 |
| 156 | 3300026035 | Ga0207703_10003006 | Ga0207703_1000300611 | 623 |
| 157 | 3300026041 | Ga0207639_10021424 | Ga0207639_100214243 | 623 |
| 158 | 3300026088 | Ga0207641_10000818 | Ga0207641_1000081821 | 623 |
| 159 | 3300026088 | Ga0207641_10001290 | Ga0207641_1000129022 | 623 |
| 160 | 3300026088 | Ga0207641_10007071 | Ga0207641_100070717 | 623 |
| 161 | 3300026095 | Ga0207676_10004951 | Ga0207676_100049515 | 623 |
| 162 | 3300028380 | Ga0268265_10000323 | Ga0268265_1000032314 | 623 |
| 163 | 3300028381 | Ga0268264_10000001 | Ga0268264_100000011142 | 623 |
| 164 | 3300028381 | Ga0268264_10000120 | Ga0268264_10000120101 | 623 |
| 165 | 3300031731 | Ga0307405_10022368 | Ga0307405_100223682 | 623 |
| 166 | 3300031911 | Ga0307412_10018574 | Ga0307412_100185743 | 623 |
| 167 | 3300049579 | Ga0501043_0004097 | Ga0501043_0004097_970_2850 | 623 |
| 168 | 3300049581 | Ga0501047_0001134 | Ga0501047_0001134_22016_23896 | 623 |
| 169 | 3300049582 | Ga0501048_0052846 | Ga0501048_0052846_879_2759 | 623 |
| 170 | 3300049586 | Ga0501070_0020872 | Ga0501070_0020872_2734_4614 | 623 |
| 171 | 3300049822 | Ga0501035_0094188 | Ga0501035_0094188_22_1902 | 623 |
| 172 | 3300013105 | Ga0157369_10034503 | Ga0157369_100345033 | 624 |
| 173 | 3300021384 | Ga0213876_10008261 | Ga0213876_100082613 | 624 |
| 174 | 3300039437 | Ga0436365_1202634 | Ga0436365_1202634_21319_23199 | 624 |
| 175 | 3300053087 | Ga0500643_009406 | Ga0500643_009406_1236_3119 | 624 |
| 176 | 3300053157 | Ga0500624_000026 | Ga0500624_000026_92801_94684 | 624 |
| 177 | 3300001976 | JGI24752J21851_1000039 | JGI24752J21851_100003913 | 626 |
| 178 | 3300005331 | Ga0070670_100000030 | Ga0070670_100000030149 | 626 |
| 179 | 3300005367 | Ga0070667_100000161 | Ga0070667_1000001618 | 626 |
| 180 | 3300005618 | Ga0068864_100000041 | Ga0068864_100000041148 | 626 |
| 181 | 3300005841 | Ga0068863_100000035 | Ga0068863_100000035148 | 626 |
| 182 | 3300005844 | Ga0068862_100000042 | Ga0068862_10000004227 | 626 |
| 183 | 3300009011 | Ga0105251_10000165 | Ga0105251_1000016529 | 626 |
| 184 | 3300009101 | Ga0105247_10004564 | Ga0105247_100045644 | 626 |
| 185 | 3300009177 | Ga0105248_10000045 | Ga0105248_10000045145 | 626 |
| 186 | 3300009553 | Ga0105249_10000055 | Ga0105249_1000005526 | 626 |
| 187 | 3300025735 | Ga0207713_1001365 | Ga0207713_10013659 | 626 |
| 188 | 3300025900 | Ga0207710_10002325 | Ga0207710_100023256 | 626 |
| 189 | 3300025925 | Ga0207650_10000111 | Ga0207650_1000011188 | 626 |
| 190 | 3300025941 | Ga0207711_10000027 | Ga0207711_1000002792 | 626 |
| 191 | 3300025961 | Ga0207712_10000131 | Ga0207712_1000013126 | 626 |
| 192 | 3300025986 | Ga0207658_10000238 | Ga0207658_100002388 | 626 |
| 193 | 3300026088 | Ga0207641_10000041 | Ga0207641_10000041147 | 626 |
| 194 | 3300026095 | Ga0207676_10000039 | Ga0207676_1000003930 | 626 |
| 195 | 3300028380 | Ga0268265_10000061 | Ga0268265_100000615 | 626 |
| 196 | 3300048920 | Ga0496117_0032017 | Ga0496117_0032017_1149_3035 | 626 |
| 197 | 3300048921 | Ga0496118_0000297 | Ga0496118_0000297_37471_39357 | 626 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3bez-assembly1.cif.gz_C | crystal structure of escherichia coli signal peptide peptidase (sppa), semet crystals | 0.944 | 45 | 536 |
| 3bf0-assembly1.cif.gz_A | crystal structure of escherichia coli signal peptide peptidase (sppa), native crystals | 0.9378 | 47 | 536 |
| 3bez-assembly1.cif.gz_C | crystal structure of escherichia coli signal peptide peptidase (sppa), semet crystals | 0.9363 | 45 | 536 |
| 3bf0-assembly1.cif.gz_A | crystal structure of escherichia coli signal peptide peptidase (sppa), native crystals | 0.9321 | 47 | 536 |
| 3rst-assembly1.cif.gz_A | crystal structure of bacillus subtilis signal peptide peptidase a | 0.8873 | 310 | 538 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3bezC03 | Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.9282 | 304 | 536 | 3.90.226.10 |
| 3bezB01 | Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.9229 | 47 | 297 | 3.90.226.10 |
| 4kwbC01 | Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.9077 | 310 | 538 | 3.90.226.10 |
| 3bezB01 | Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.8962 | 47 | 297 | 3.90.226.10 |
| 3bezC03 | Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.8956 | 304 | 536 | 3.90.226.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A258BRS9-F1-model_v4 | Signal peptide peptidase SppA | 0.9555 | 155 | 622 |
GO:0006465
GO:0008236 GO:0016020 |
| AF-A0A382L3U4-F1-model_v4 | Peptidase S49 domain-containing protein | 0.9333 | 108 | 506 |
GO:0006465
GO:0008236 GO:0016020 |
| AF-A0A258BRS9-F1-model_v4 | Signal peptide peptidase SppA | 0.9323 | 155 | 622 |
GO:0006465
GO:0008236 GO:0016020 |
| AF-A0A379VTR4-F1-model_v4 | Protease IV (EC 3.4.21.-) | 0.9316 | 389 | 543 |
GO:0006508
GO:0008236 |
| AF-A0A349UKJ8-F1-model_v4 | Peptidase S49 domain-containing protein | 0.9262 | 312 | 415 |
GO:0006508
GO:0008236 GO:0016020 |
Predicted Structure (AlphaFold2)
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