F303020

General Info

Members Datasets Scaffolds Average Seq Length
197 139 394 564

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10003145|Ga0157370_1000314510
Length 615
Sequence VFCQGFHEQEVSFSPVGKDLIWVIRAQTQVGFKYNKNTNISKFCIADLTFFMRFHVLATDYDGTLADQGQVGEDVLNKLKEFQVTGRRKILVTGREMKDLISVFPGYKIFDYIVAENGALIYETATGKEQLLGPEPDPAFVKSLEEKDVYPLSVGKVIIATWEPHEKTVLEAIKASGSERQVIFNKGAVMILPPGVNKATGLQHLLHHLHLSLHNTVGVGDAENDGALLQAAECAVAVNNALPALKGLADLVTENAHGRGVMELMDRIIATDLEELNGKMQRHYLELGVLEDGAPFLISPYRSGILLAGASGSGKTTFTISITESLVERGYQFCLIDPEGDYLQLPGAVVIGDEHVMPSMEQIRDLLKDPGQNLVICALAVPLDERPQLFSRFLTMFQDLRKEYGHPHWLLLDEAHHLMPAPAAIVSNGLPDDLNNFIIISTSPHALHPSTLSRVGMVITLGKDAAYPIELYCKALKAPMPDGVPMLGENEIAVWERDSRRPPYKAKIKLPSQLLQRHKRKYAMGDMSYNSFIFTGPENRQRLVANNLMMFVHLAEGIDAGTWMFHLGRKDFSRWFEHTVHDPELAEVGREAERMNDVAASKKHIIDYIKQKYTA

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
56 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
94 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
100 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
110 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
111 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
114 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
117 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
134 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
135 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
136 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
137 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
138 2738541278 Niastella sp. CF465 Isolate Unclassified
139 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.98
Metatranscriptomes 0
Isolates 1.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.05
Nodule 0
Rhizoplane 1.52
Rhizosphere 89.34
Stem 0
Stem Tuber 0
Unclassified 6.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10003145 3300013104 Bacteria 19556
2 JGI24751J29686_10001549 3300002459 Bacteria 4763
3 JGI25406J46586_10000883 3300003203 Bacteria 14118
4 JGI25165J46597_1002785 3300003214 Bacteria 5075
5 rootH1_10112504 3300003316 Unclassified 2422
6 rootH2_10016177 3300003320 Bacteria 8291
7 rootL2_10027060 3300003322 Bacteria 4649
8 rootH1_10071264 3300003323 Bacteria 4491
9 Ga0070658_10001119 3300005327 Bacteria 22878
10 Ga0070676_10000097 3300005328 Bacteria 30711
11 Ga0068869_100014522 3300005334 Bacteria 5263
12 Ga0068869_100069632 3300005334 Bacteria 2601
13 Ga0070666_10019137 3300005335 Bacteria 4416
14 Ga0068868_100019970 3300005338 Bacteria 5026
15 Ga0068868_100042051 3300005338 Unclassified 3564
16 Ga0070668_100023240 3300005347 Bacteria 4688
17 Ga0070675_100093355 3300005354 Bacteria 2523
18 Ga0070673_100000390 3300005364 Bacteria 23156
19 Ga0070667_100001708 3300005367 Bacteria 19644
20 Ga0070667_100136221 3300005367 Bacteria 2147
21 Ga0068867_100064359 3300005459 Bacteria 2726
22 Ga0068867_100107749 3300005459 Unclassified 2136
23 Ga0068853_100003658 3300005539 Bacteria 11792
24 Ga0070672_100011778 3300005543 Bacteria 6112
25 Ga0068855_100004747 3300005563 Bacteria 16594
26 Ga0068855_100039326 3300005563 Bacteria 5615
27 Ga0068857_100004599 3300005577 Bacteria 11690
28 Ga0068857_100034016 3300005577 Bacteria 4509
29 Ga0068852_100002136 3300005616 Bacteria 13554
30 Ga0068852_100177066 3300005616 Bacteria 2003
31 Ga0068859_100014308 3300005617 Bacteria 7959
32 Ga0068864_100002317 3300005618 Bacteria 15748
33 Ga0068861_100004515 3300005719 Bacteria 9347
34 Ga0068851_10015409 3300005834 Unclassified 3642
35 Ga0068863_100001816 3300005841 Bacteria 21206
36 Ga0068858_100002288 3300005842 Bacteria 19394
37 Ga0068858_100005312 3300005842 Bacteria 12629
38 Ga0068860_100007727 3300005843 Bacteria 10747
39 Ga0068860_100109726 3300005843 Bacteria 2637
40 Ga0081539_10001426 3300005985 Bacteria 41076
41 Ga0097621_100000393 3300006237 Bacteria 30466
42 Ga0097621_100065949 3300006237 Bacteria 2981
43 Ga0068871_100015374 3300006358 Bacteria 5725
44 Ga0075430_100117590 3300006846 Bacteria 2216
45 Ga0075429_100003373 3300006880 Bacteria 13621
46 Ga0068865_100011302 3300006881 Bacteria 5584
47 Ga0097620_100014308 3300006931 Bacteria 7959
48 Ga0105240_10000082 3300009093 Bacteria 195184
49 Ga0105240_10000268 3300009093 Bacteria 102828
50 Ga0105240_10034975 3300009093 Bacteria 6478
51 Ga0105240_10054552 3300009093 Bacteria 5009
52 Ga0105240_10074773 3300009093 Bacteria 4181
53 Ga0105241_10000937 3300009174 Bacteria 22075
54 Ga0105241_10019133 3300009174 Bacteria 5050
55 Ga0105241_10020015 3300009174 Bacteria 4942
56 Ga0105242_10014804 3300009176 Bacteria 6041
57 Ga0105237_10000256 3300009545 Bacteria 75634
58 Ga0105237_10000801 3300009545 Bacteria 42937
59 Ga0105237_10001128 3300009545 Bacteria 35815
60 Ga0105237_10004223 3300009545 Bacteria 16730
61 Ga0105237_10075357 3300009545 Unclassified 3365
62 Ga0105238_10056021 3300009551 Unclassified 3955
63 Ga0105249_10018047 3300009553 Bacteria 6272
64 Ga0105239_10000811 3300010375 Bacteria 44304
65 Ga0105239_10000848 3300010375 Bacteria 43534
66 Ga0105239_10001453 3300010375 Bacteria 31554
67 Ga0105239_10006878 3300010375 Bacteria 13124
68 Ga0105239_10016564 3300010375 Bacteria 8147
69 Ga0105239_10053440 3300010375 Bacteria 4431
70 Ga0105239_10271656 3300010375 Bacteria 1907
71 Ga0157369_10011629 3300013105 Bacteria 9995
72 Ga0157374_10000004 3300013296 Bacteria 759774
73 Ga0157374_10006104 3300013296 Bacteria 10197
74 Ga0157378_10001805 3300013297 Bacteria 19224
75 Ga0157378_10048170 3300013297 Bacteria 3789
76 Ga0157378_10069853 3300013297 Unclassified 3152
77 Ga0163162_10001420 3300013306 Bacteria 22262
78 Ga0163162_10001438 3300013306 Bacteria 22185
79 Ga0163162_10009260 3300013306 Bacteria 9578
80 Ga0157372_10000524 3300013307 Bacteria 42389
81 Ga0157372_10003268 3300013307 Bacteria 17515
82 Ga0157372_10003732 3300013307 Bacteria 16358
83 Ga0157375_10000152 3300013308 Bacteria 67342
84 Ga0163163_10001387 3300014325 Bacteria 20467
85 Ga0163163_10108545 3300014325 Bacteria 2803
86 Ga0182008_10000314 3300014497 Bacteria 38050
87 Ga0157379_10000812 3300014968 Bacteria 25341
88 Ga0157379_10059656 3300014968 Unclassified 3411
89 Ga0157376_10000026 3300014969 Bacteria 204319
90 Ga0163161_10001125 3300017792 Bacteria 20161
91 Ga0213875_10002450 3300021388 Bacteria 11076
92 Ga0207427_100060 3300025231 Bacteria 186274
93 Ga0209437_100021 3300025233 Bacteria 646400
94 Ga0209233_1000035 3300025261 Bacteria 568478
95 Ga0207656_10005652 3300025321 Unclassified 4438
96 Ga0207680_10000860 3300025903 Bacteria 14326
97 Ga0207647_10014098 3300025904 Bacteria 5522
98 Ga0207645_10000332 3300025907 Bacteria 39392
99 Ga0207705_10000937 3300025909 Bacteria 23816
100 Ga0207695_10000053 3300025913 Bacteria 396740
101 Ga0207695_10000164 3300025913 Bacteria 196777
102 Ga0207695_10036294 3300025913 Bacteria 5330
103 Ga0207695_10095916 3300025913 Unclassified 2968
104 Ga0207671_10000730 3300025914 Bacteria 41672
105 Ga0207671_10003577 3300025914 Bacteria 15388
106 Ga0207671_10003631 3300025914 Bacteria 15246
107 Ga0207671_10017863 3300025914 Bacteria 5457
108 Ga0207694_10018725 3300025924 Bacteria 5234
109 Ga0207687_10113774 3300025927 Bacteria 2013
110 Ga0207686_10012027 3300025934 Bacteria 4752
111 Ga0207691_10000164 3300025940 Bacteria 61768
112 Ga0207689_10010597 3300025942 Bacteria 7937
113 Ga0207689_10022271 3300025942 Bacteria 5327
114 Ga0207667_10001134 3300025949 Bacteria 33585
115 Ga0207667_10006731 3300025949 Bacteria 13883
116 Ga0207667_10062039 3300025949 Bacteria 3910
117 Ga0207651_10000648 3300025960 Bacteria 14769
118 Ga0207712_10013879 3300025961 Bacteria 5166
119 Ga0207668_10000264 3300025972 Bacteria 34945
120 Ga0207640_10035713 3300025981 Bacteria 3113
121 Ga0207658_10000445 3300025986 Bacteria 38969
122 Ga0207677_10000570 3300026023 Bacteria 23162
123 Ga0207703_10002150 3300026035 Bacteria 17328
124 Ga0207639_10038823 3300026041 Bacteria 3544
125 Ga0207702_10041459 3300026078 Unclassified 3861
126 Ga0207641_10016514 3300026088 Bacteria 6045
127 Ga0207648_10015522 3300026089 Bacteria 7001
128 Ga0207676_10004877 3300026095 Bacteria 9495
129 Ga0207676_10024519 3300026095 Bacteria 4465
130 Ga0207674_10001914 3300026116 Bacteria 26409
131 Ga0207675_100008996 3300026118 Bacteria 9372
132 Ga0268266_10000010 3300028379 Bacteria 1030233
133 Ga0268266_10000140 3300028379 Bacteria 140387
134 Ga0268266_10001035 3300028379 Bacteria 34953
135 Ga0268264_10000012 3300028381 Bacteria 521740
136 Ga0268264_10000982 3300028381 Bacteria 29187
137 Ga0268264_10011967 3300028381 Bacteria 7145
138 Ga0268264_10023158 3300028381 Bacteria 5068
139 Ga0307511_10000790 3300030521 Bacteria 33725
140 Ga0307509_10077417 3300031507 Bacteria 3449
141 Ga0307408_100099779 3300031548 Bacteria 2210
142 Ga0265313_10001730 3300031595 Bacteria 20091
143 Ga0307508_10007386 3300031616 Bacteria 10241
144 Ga0307516_10020489 3300031730 Bacteria 6832
145 Ga0307415_100115128 3300032126 Bacteria 2003
146 Ga0307510_10047117 3300033180 Unclassified 4623
147 Ga0373931_0089799 3300035691 Bacteria 1710
148 Ga0436364_0039191 3300037853 Bacteria 13331
149 Ga0436360_0417487 3300039438 Bacteria 5962
150 Ga0466969_0000234 3300044656 Bacteria 30322
151 Ga0466972_0000584 3300044658 Bacteria 17736
152 Ga0466966_0011915 3300044684 Bacteria 5763
153 Ga0466968_0007166 3300044735 Unclassified 4235
154 Ga0466957_0019064 3300044842 Bacteria 4034
155 Ga0466959_0000089 3300045049 Bacteria 57482
156 Ga0466959_0002764 3300045049 Bacteria 11300
157 Ga0466958_0010020 3300045836 Bacteria 5295
158 Ga0495653_0015106 3300046463 Bacteria 6294
159 Ga0495606_0003148 3300046507 Bacteria 17882
160 Ga0495648_0024258 3300046524 Bacteria 4136
161 Ga0495667_0036608 3300046559 Bacteria 3274
162 Ga0495668_0000957 3300046616 Bacteria 32067
163 Ga0495668_0004006 3300046616 Bacteria 10724
164 Ga0495634_0036187 3300046642 Bacteria 3377
165 Ga0495611_0000144 3300046648 Bacteria 50318
166 Ga0495599_0002483 3300046678 Bacteria 10746
167 Ga0495680_0018750 3300047322 Bacteria 5864
168 Ga0495687_000009 3300047443 Bacteria 419317
169 Ga0495687_000385 3300047443 Bacteria 54684
170 Ga0495675_0074777 3300047444 Bacteria 2135
171 Ga0496112_0013164 3300048915 Bacteria 7633
172 Ga0496114_0016972 3300048917 Bacteria 5871
173 Ga0496115_0004995 3300048918 Bacteria 9635
174 Ga0501038_0036683 3300049574 Bacteria 4301
175 Ga0501047_0000799 3300049581 Bacteria 32889
176 Ga0501047_0037963 3300049581 Bacteria 4659
177 Ga0501047_0038860 3300049581 Bacteria 4603
178 Ga0501067_0003648 3300049583 Bacteria 8483
179 Ga0501068_0000116 3300049584 Bacteria 34778
180 Ga0501069_0005922 3300049585 Bacteria 6373
181 Ga0501072_0000492 3300049588 Bacteria 28357
182 Ga0501073_0113762 3300049589 Bacteria 1876
183 Ga0501073_0116855 3300049589 Bacteria 1848
184 Ga0501074_0001836 3300049590 Bacteria 14548
185 Ga0501074_0136514 3300049590 Bacteria 1754
186 Ga0501079_0000754 3300049741 Bacteria 22025
187 Ga0501080_0098178 3300049742 Bacteria 2718
188 Ga0501083_0007483 3300049744 Bacteria 7736
189 Ga0501044_0003122 3300049823 Bacteria 18777
190 Ga0500578_0013703 3300053086 Bacteria 5220
191 Ga0500583_0001987 3300053092 Bacteria 6014
192 Ga0501084_0000164 3300054114 Bacteria 50990
193 Ga0501084_0001082 3300054114 Bacteria 21222
194 Ga0501082_0000765 3300060353 Bacteria 28141
195 Ga0466962_0005052 3300061719 Bacteria 6346
196 2738728274 2738541278 Bacteria 9755573
197 2884935454 2884933994 Bacteria 4535041
198 Ga0157370_10003145
199 JGI24751J29686_10001549
200 JGI25406J46586_10000883
201 JGI25165J46597_1002785
202 rootH1_10112504
203 rootH2_10016177
204 rootL2_10027060
205 rootH1_10071264
206 Ga0070658_10001119
207 Ga0070676_10000097
208 Ga0068869_100014522
209 Ga0068869_100069632
210 Ga0070666_10019137
211 Ga0068868_100019970
212 Ga0068868_100042051
213 Ga0070668_100023240
214 Ga0070675_100093355
215 Ga0070673_100000390
216 Ga0070667_100001708
217 Ga0070667_100136221
218 Ga0068867_100064359
219 Ga0068867_100107749
220 Ga0068853_100003658
221 Ga0070672_100011778
222 Ga0068855_100004747
223 Ga0068855_100039326
224 Ga0068857_100004599
225 Ga0068857_100034016
226 Ga0068852_100002136
227 Ga0068852_100177066
228 Ga0068859_100014308
229 Ga0068864_100002317
230 Ga0068861_100004515
231 Ga0068851_10015409
232 Ga0068863_100001816
233 Ga0068858_100002288
234 Ga0068858_100005312
235 Ga0068860_100007727
236 Ga0068860_100109726
237 Ga0081539_10001426
238 Ga0097621_100000393
239 Ga0097621_100065949
240 Ga0068871_100015374
241 Ga0075430_100117590
242 Ga0075429_100003373
243 Ga0068865_100011302
244 Ga0097620_100014308
245 Ga0105240_10000082
246 Ga0105240_10000268
247 Ga0105240_10034975
248 Ga0105240_10054552
249 Ga0105240_10074773
250 Ga0105241_10000937
251 Ga0105241_10019133
252 Ga0105241_10020015
253 Ga0105242_10014804
254 Ga0105237_10000256
255 Ga0105237_10000801
256 Ga0105237_10001128
257 Ga0105237_10004223
258 Ga0105237_10075357
259 Ga0105238_10056021
260 Ga0105249_10018047
261 Ga0105239_10000811
262 Ga0105239_10000848
263 Ga0105239_10001453
264 Ga0105239_10006878
265 Ga0105239_10016564
266 Ga0105239_10053440
267 Ga0105239_10271656
268 Ga0157369_10011629
269 Ga0157374_10000004
270 Ga0157374_10006104
271 Ga0157378_10001805
272 Ga0157378_10048170
273 Ga0157378_10069853
274 Ga0163162_10001420
275 Ga0163162_10001438
276 Ga0163162_10009260
277 Ga0157372_10000524
278 Ga0157372_10003268
279 Ga0157372_10003732
280 Ga0157375_10000152
281 Ga0163163_10001387
282 Ga0163163_10108545
283 Ga0182008_10000314
284 Ga0157379_10000812
285 Ga0157379_10059656
286 Ga0157376_10000026
287 Ga0163161_10001125
288 Ga0213875_10002450
289 Ga0207427_100060
290 Ga0209437_100021
291 Ga0209233_1000035
292 Ga0207656_10005652
293 Ga0207680_10000860
294 Ga0207647_10014098
295 Ga0207645_10000332
296 Ga0207705_10000937
297 Ga0207695_10000053
298 Ga0207695_10000164
299 Ga0207695_10036294
300 Ga0207695_10095916
301 Ga0207671_10000730
302 Ga0207671_10003577
303 Ga0207671_10003631
304 Ga0207671_10017863
305 Ga0207694_10018725
306 Ga0207687_10113774
307 Ga0207686_10012027
308 Ga0207691_10000164
309 Ga0207689_10010597
310 Ga0207689_10022271
311 Ga0207667_10001134
312 Ga0207667_10006731
313 Ga0207667_10062039
314 Ga0207651_10000648
315 Ga0207712_10013879
316 Ga0207668_10000264
317 Ga0207640_10035713
318 Ga0207658_10000445
319 Ga0207677_10000570
320 Ga0207703_10002150
321 Ga0207639_10038823
322 Ga0207702_10041459
323 Ga0207641_10016514
324 Ga0207648_10015522
325 Ga0207676_10004877
326 Ga0207676_10024519
327 Ga0207674_10001914
328 Ga0207675_100008996
329 Ga0268266_10000010
330 Ga0268266_10000140
331 Ga0268266_10001035
332 Ga0268264_10000012
333 Ga0268264_10000982
334 Ga0268264_10011967
335 Ga0268264_10023158
336 Ga0307511_10000790
337 Ga0307509_10077417
338 Ga0307408_100099779
339 Ga0265313_10001730
340 Ga0307508_10007386
341 Ga0307516_10020489
342 Ga0307415_100115128
343 Ga0307510_10047117
344 Ga0373931_0089799
345 Ga0436364_0039191
346 Ga0436360_0417487
347 Ga0466969_0000234
348 Ga0466972_0000584
349 Ga0466966_0011915
350 Ga0466968_0007166
351 Ga0466957_0019064
352 Ga0466959_0000089
353 Ga0466959_0002764
354 Ga0466958_0010020
355 Ga0495653_0015106
356 Ga0495606_0003148
357 Ga0495648_0024258
358 Ga0495667_0036608
359 Ga0495668_0000957
360 Ga0495668_0004006
361 Ga0495634_0036187
362 Ga0495611_0000144
363 Ga0495599_0002483
364 Ga0495680_0018750
365 Ga0495687_000009
366 Ga0495687_000385
367 Ga0495675_0074777
368 Ga0496112_0013164
369 Ga0496114_0016972
370 Ga0496115_0004995
371 Ga0501038_0036683
372 Ga0501047_0000799
373 Ga0501047_0037963
374 Ga0501047_0038860
375 Ga0501067_0003648
376 Ga0501068_0000116
377 Ga0501069_0005922
378 Ga0501072_0000492
379 Ga0501073_0113762
380 Ga0501073_0116855
381 Ga0501074_0001836
382 Ga0501074_0136514
383 Ga0501079_0000754
384 Ga0501080_0098178
385 Ga0501083_0007483
386 Ga0501044_0003122
387 Ga0500578_0013703
388 Ga0500583_0001987
389 Ga0501084_0000164
390 Ga0501084_0001082
391 Ga0501082_0000765
392 Ga0466962_0005052
393 2738728274
394 2884935454

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08282

Hydrolase_3

haloacid dehalogenase-like hydrolase

134

265

0.91

PF08282

Hydrolase_3

haloacid dehalogenase-like hydrolase

57

132

0.89

PF05116

S6PP

Sucrose-6F-phosphate phosphohydrolase

159

265

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wr8-assembly1.cif.gz_A crystal structure of hypothetical protein ph1421 from pyrococcus horikoshii. 0.8676 3 223
4umf-assembly1.cif.gz_C crystal structure of 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase from moraxella catarrhalis in complex with magnesium ion, phosphate ion and kdo molecule 0.8331 2 219
1wr8-assembly1.cif.gz_A crystal structure of hypothetical protein ph1421 from pyrococcus horikoshii. 0.8327 3 223
2b30-assembly2.cif.gz_D initial crystallographic structural analysis of a putative had/cof-like hydrolase from plasmodium vivax 0.8278 2 220
3dnp-assembly1.cif.gz_A-2 crystal structure of stress response protein yhax from bacillus subtilis 0.8219 4 223
ID Description Score Start End Superfamily
1wr8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9049 3 223 3.40.50.1000
1wr8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8896 3 223 3.40.50.1000
1nrwA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8778 5 211 3.40.50.1000
3niwA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.875 3 217 3.40.50.1000
3dnpA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8623 4 220 3.40.50.1000
ID Description Score Start End GO Terms
AF-K9T061-F1-model_v4 HAD-superfamily hydrolase, subfamily IIB 0.9857 1 219 GO:0000287
GO:0005829
GO:0016791
AF-A0A4Q3GYG4-F1-model_v4 deleted 0.984 1 224
AF-A0A2W4LUW9-F1-model_v4 Phosphoglycolate phosphatase 0.9838 1 280 GO:0000287
GO:0005829
GO:0016791
AF-A0A2W4LUW9-F1-model_v4 Phosphoglycolate phosphatase 0.9803 1 280 GO:0000287
GO:0005829
GO:0016791
AF-A0A257XAE7-F1-model_v4 Haloacid dehalogenase 0.9802 2 219 GO:0000287
GO:0005829
GO:0016791

Map