F302859

General Info

Members Datasets Scaffolds Average Seq Length
197 147 394 439

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100001189|Ga0075428_10000118917
Length 498
Sequence MKKLILGFVIAISASLAAQAEEPLKVSGAPRGESEWNLSVIGGPGVHSLEQRDDLASADWKVIQALTTRTNFALTKAGSKAFVRAKAAPANDVSIFTNATWLLAEGRAAFRHDTFGSEAFWGGALKLHRAIAGTNHGGVGPGVTPRTALAVGLKVDSEALPESIKQALARGEVNLDDPATTLALLQLDAVVGVKGIFNQEQQLTSLGIQCALCHSTVDNSFTSGIGQRLDGWPNRDLNVGAIINLSPDVTVLTNALEVDEATVRTVLQSWGPGKFDAELILDGKAFRPDGKSAATILPAAFGLAGVNLSTYTGWGSVTHWNAFVSNLEMHGSGTFWDPRLNDTNTFPLAARKGYANVRTTNDLITPKLAALHFYQLSIPAPKPPATIYNAQAAIRGEVLFKGKAQCATCHVPPLYTEPGWNMHTPQEIGIDDFQANRSPDKRYRTTPLGGLFARSKGGFYHDGRFATLDDVVNHYERHFNLGLTAQETADLREFLKSL

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
109 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
110 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
111 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 7.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100001189 3300006844 Bacteria 27838
2 JGI25406J46586_10035213 3300003203 Bacteria 1829
3 Ga0070658_10003549 3300005327 Bacteria 12805
4 Ga0070676_10039722 3300005328 Bacteria 2722
5 Ga0070676_10048094 3300005328 Bacteria 2493
6 Ga0070683_100002042 3300005329 Bacteria 15896
7 Ga0070683_100047161 3300005329 Bacteria 3981
8 Ga0070666_10001098 3300005335 Bacteria 16532
9 Ga0070680_100002195 3300005336 Bacteria 14392
10 Ga0070680_100024687 3300005336 Bacteria 4805
11 Ga0070682_100007011 3300005337 Bacteria 6337
12 Ga0068868_100000093 3300005338 Bacteria 54811
13 Ga0068868_100014844 3300005338 Bacteria 5750
14 Ga0070668_100000970 3300005347 Bacteria 20082
15 Ga0070668_100240760 3300005347 Bacteria 1498
16 Ga0070669_100049598 3300005353 Bacteria 3065
17 Ga0070669_100110935 3300005353 Bacteria 2081
18 Ga0070675_100133283 3300005354 Bacteria 2119
19 Ga0070674_100008280 3300005356 Bacteria 6185
20 Ga0070667_100008295 3300005367 Bacteria 8609
21 Ga0070701_10002323 3300005438 Bacteria 7296
22 Ga0070694_100005679 3300005444 Bacteria 7562
23 Ga0070662_100007022 3300005457 Bacteria 7284
24 Ga0070681_10138286 3300005458 Bacteria 2365
25 Ga0068867_100006232 3300005459 Bacteria 8442
26 Ga0070679_100001682 3300005530 Bacteria 19911
27 Ga0070679_100006693 3300005530 Bacteria 10750
28 Ga0070679_100009487 3300005530 Bacteria 9205
29 Ga0070679_100260195 3300005530 Bacteria 1690
30 Ga0070684_100002808 3300005535 Bacteria 12919
31 Ga0070684_100101109 3300005535 Bacteria 2575
32 Ga0068853_100013471 3300005539 Bacteria 6678
33 Ga0070672_100001914 3300005543 Bacteria 13057
34 Ga0070686_100001149 3300005544 Bacteria 15182
35 Ga0070665_100004105 3300005548 Bacteria 15317
36 Ga0070704_100010303 3300005549 Bacteria 5685
37 Ga0070704_100034328 3300005549 Bacteria 3439
38 Ga0068855_100024266 3300005563 Bacteria 7260
39 Ga0068855_100047455 3300005563 Bacteria 5074
40 Ga0070664_100041905 3300005564 Bacteria 3864
41 Ga0068856_100267688 3300005614 Unclassified 1725
42 Ga0068852_100031359 3300005616 Bacteria 4385
43 Ga0068852_100040736 3300005616 Bacteria 3921
44 Ga0068852_100278467 3300005616 Bacteria 1612
45 Ga0068859_100000005 3300005617 Bacteria 430800
46 Ga0068859_100009462 3300005617 Bacteria 9841
47 Ga0068864_100006415 3300005618 Bacteria 9644
48 Ga0068864_100157222 3300005618 Bacteria 2064
49 Ga0068851_10001809 3300005834 Bacteria 9360
50 Ga0068863_100001100 3300005841 Bacteria 27016
51 Ga0068858_100009832 3300005842 Bacteria 9099
52 Ga0068860_100002897 3300005843 Bacteria 17784
53 Ga0068862_100047709 3300005844 Bacteria 3656
54 Ga0068862_100242128 3300005844 Bacteria 1640
55 Ga0081455_10003299 3300005937 Bacteria 18672
56 Ga0081540_1001244 3300005983 Bacteria 22238
57 Ga0081539_10012609 3300005985 Bacteria 6487
58 Ga0097621_100161168 3300006237 Bacteria 1928
59 Ga0068871_100017969 3300006358 Bacteria 5365
60 Ga0075428_100086970 3300006844 Unclassified 3409
61 Ga0075430_100027789 3300006846 Bacteria 4805
62 Ga0075430_100033913 3300006846 Bacteria 4333
63 Ga0075431_100002388 3300006847 Bacteria 18045
64 Ga0075433_10015028 3300006852 Bacteria 6337
65 Ga0075429_100000856 3300006880 Bacteria 23945
66 Ga0075436_100014766 3300006914 Bacteria 5351
67 Ga0097620_100000005 3300006931 Bacteria 430800
68 Ga0097620_100009462 3300006931 Bacteria 9841
69 Ga0075435_100060401 3300007076 Bacteria 3073
70 Ga0105240_10010583 3300009093 Bacteria 12959
71 Ga0105240_10050889 3300009093 Bacteria 5218
72 Ga0111539_10051966 3300009094 Bacteria 4880
73 Ga0111539_10244374 3300009094 Bacteria 2090
74 Ga0105247_10013968 3300009101 Bacteria 4815
75 Ga0114129_10001348 3300009147 Bacteria 32927
76 Ga0114129_10002130 3300009147 Bacteria 27289
77 Ga0114129_10383886 3300009147 Bacteria 1855
78 Ga0114129_10516409 3300009147 Bacteria 1558
79 Ga0105243_10002705 3300009148 Bacteria 14735
80 Ga0105241_10001033 3300009174 Bacteria 21215
81 Ga0105241_10222255 3300009174 Unclassified 1588
82 Ga0105238_10050335 3300009551 Bacteria 4194
83 Ga0105249_10299661 3300009553 Unclassified 1612
84 Ga0105239_10375086 3300010375 Bacteria 1608
85 Ga0157371_10061838 3300013102 Bacteria 2655
86 Ga0157370_10006784 3300013104 Bacteria 12559
87 Ga0157369_10023139 3300013105 Bacteria 6923
88 Ga0157369_10052146 3300013105 Bacteria 4427
89 Ga0157374_10003576 3300013296 Bacteria 13085
90 Ga0157374_10135797 3300013296 Bacteria 2384
91 Ga0157378_10003862 3300013297 Bacteria 13256
92 Ga0163162_10003581 3300013306 Bacteria 14861
93 Ga0157375_10002956 3300013308 Bacteria 14749
94 Ga0157375_10141094 3300013308 Unclassified 2536
95 Ga0157375_10227891 3300013308 Unclassified 2022
96 Ga0163163_10003557 3300014325 Bacteria 13229
97 Ga0163163_10071579 3300014325 Bacteria 3455
98 Ga0163163_10090368 3300014325 Bacteria 3075
99 Ga0157379_10003531 3300014968 Bacteria 13241
100 Ga0157376_10006779 3300014969 Bacteria 8108
101 Ga0207656_10018928 3300025321 Bacteria 2717
102 Ga0207680_10001467 3300025903 Bacteria 11168
103 Ga0207645_10047873 3300025907 Bacteria 2730
104 Ga0207705_10003033 3300025909 Bacteria 12807
105 Ga0207684_10064191 3300025910 Bacteria 3118
106 Ga0207707_10001394 3300025912 Bacteria 22410
107 Ga0207707_10202116 3300025912 Bacteria 1732
108 Ga0207695_10021263 3300025913 Bacteria 7409
109 Ga0207660_10003302 3300025917 Bacteria 10550
110 Ga0207652_10002281 3300025921 Bacteria 16273
111 Ga0207652_10025606 3300025921 Bacteria 4906
112 Ga0207652_10029119 3300025921 Bacteria 4614
113 Ga0207706_10007633 3300025933 Bacteria 9998
114 Ga0207706_10017317 3300025933 Bacteria 6490
115 Ga0207686_10037204 3300025934 Bacteria 2936
116 Ga0207709_10146279 3300025935 Bacteria 1631
117 Ga0207665_10034287 3300025939 Bacteria 3368
118 Ga0207691_10001432 3300025940 Bacteria 23824
119 Ga0207661_10008691 3300025944 Bacteria 7259
120 Ga0207661_10025057 3300025944 Bacteria 4530
121 Ga0207661_10029996 3300025944 Bacteria 4183
122 Ga0207651_10001070 3300025960 Bacteria 12162
123 Ga0207668_10000554 3300025972 Bacteria 23448
124 Ga0207658_10001247 3300025986 Bacteria 20115
125 Ga0207677_10000012 3300026023 Bacteria 194702
126 Ga0207677_10038704 3300026023 Bacteria 3129
127 Ga0207703_10002419 3300026035 Bacteria 16208
128 Ga0207639_10015458 3300026041 Bacteria 5387
129 Ga0207639_10023288 3300026041 Bacteria 4471
130 Ga0207641_10001203 3300026088 Bacteria 25928
131 Ga0207648_10011003 3300026089 Bacteria 8542
132 Ga0207676_10017564 3300026095 Bacteria 5186
133 Ga0207676_10062933 3300026095 Unclassified 2945
134 Ga0207674_10068126 3300026116 Bacteria 3582
135 Ga0207674_10239175 3300026116 Bacteria 1763
136 Ga0207675_100017899 3300026118 Bacteria 6607
137 Ga0207698_10046319 3300026142 Bacteria 3283
138 Ga0209967_1005553 3300027364 Bacteria 1696
139 Ga0207428_10012278 3300027907 Bacteria 7530
140 Ga0268266_10004266 3300028379 Bacteria 13756
141 Ga0268265_10154524 3300028380 Bacteria 1940
142 Ga0268264_10010336 3300028381 Bacteria 7720
143 Ga0307408_100103238 3300031548 Unclassified 2176
144 Ga0307405_10121100 3300031731 Unclassified 1791
145 Ga0307410_10004348 3300031852 Bacteria 7310
146 Ga0307406_10056799 3300031901 Unclassified 2509
147 Ga0307407_10022779 3300031903 Bacteria 3257
148 Ga0307409_100010109 3300031995 Bacteria 5841
149 Ga0307409_100230367 3300031995 Bacteria 1679
150 Ga0307416_100123350 3300032002 Unclassified 2315
151 Ga0307416_100204268 3300032002 Unclassified 1878
152 Ga0373926_0005712 3300035083 Bacteria 4107
153 Ga0373926_0035490 3300035083 Bacteria 1769
154 Ga0373956_0020730 3300035119 Bacteria 2800
155 Ga0373927_0022285 3300035695 Unclassified 4150
156 Ga0373947_0000005 3300035725 Bacteria 225129
157 Ga0373937_0022390 3300036401 Bacteria 5681
158 Ga0373937_0176344 3300036401 Bacteria 2007
159 Ga0373925_0041163 3300037068 Bacteria 3424
160 Ga0395900_0009112 3300037418 Bacteria 10167
161 Ga0453683_0102924 3300044673 Bacteria 1793
162 Ga0453684_0042641 3300044712 Bacteria 6115
163 Ga0451576_0041060 3300045051 Bacteria 4892
164 Ga0466967_0136208 3300045976 Bacteria 2284
165 Ga0495638_0003173 3300046460 Bacteria 12996
166 Ga0495618_0002457 3300046514 Bacteria 11890
167 Ga0495630_0212170 3300046517 Unclassified 1478
168 Ga0495586_0003030 3300046535 Bacteria 9060
169 Ga0495634_0007952 3300046642 Bacteria 7911
170 Ga0495635_0019941 3300046663 Bacteria 4671
171 Ga0495613_0002686 3300046689 Bacteria 13353
172 Ga0495680_0010326 3300047322 Bacteria 8332
173 Ga0495684_0064459 3300047471 Bacteria 2785
174 Ga0501032_0001957 3300049569 Bacteria 16208
175 Ga0501032_0103260 3300049569 Bacteria 1889
176 Ga0501039_0023231 3300049575 Bacteria 4759
177 Ga0501040_0019355 3300049576 Bacteria 4527
178 Ga0501041_0003541 3300049577 Bacteria 8980
179 Ga0501043_0127314 3300049579 Bacteria 1997
180 Ga0501046_0073923 3300049580 Bacteria 2644
181 Ga0501048_0006475 3300049582 Bacteria 8902
182 Ga0501072_0077389 3300049588 Bacteria 2633
183 Ga0501075_0007993 3300049591 Bacteria 7348
184 Ga0501076_0035185 3300049592 Bacteria 3919
185 Ga0501077_0005919 3300049593 Bacteria 7462
186 Ga0501080_0059183 3300049742 Bacteria 3566
187 Ga0501081_0033886 3300049743 Bacteria 3472
188 Ga0501045_0005807 3300049824 Bacteria 8542
189 nmdc:mga05p37_1339_c1 3300050507 Bacteria 28644
190 nmdc:mga09592_2621_c1 3300050508 Bacteria 14562
191 nmdc:mga0qj67_980_c1 3300050509 Bacteria 19672
192 nmdc:mga06r32_154129_c1 3300050510 Bacteria 2277
193 nmdc:mga06r32_4715_c1 3300050510 Bacteria 12259
194 nmdc:mga06r32_5899_c1 3300050510 Bacteria 11025
195 nmdc:mga08y16_1994_c1 3300050511 Bacteria 20858
196 nmdc:mga08x19_148347_c1 3300050514 Bacteria 1587
197 nmdc:mga08x19_17285_c1 3300050514 Bacteria 4412
198 Ga0075428_100001189
199 JGI25406J46586_10035213
200 Ga0070658_10003549
201 Ga0070676_10039722
202 Ga0070676_10048094
203 Ga0070683_100002042
204 Ga0070683_100047161
205 Ga0070666_10001098
206 Ga0070680_100002195
207 Ga0070680_100024687
208 Ga0070682_100007011
209 Ga0068868_100000093
210 Ga0068868_100014844
211 Ga0070668_100000970
212 Ga0070668_100240760
213 Ga0070669_100049598
214 Ga0070669_100110935
215 Ga0070675_100133283
216 Ga0070674_100008280
217 Ga0070667_100008295
218 Ga0070701_10002323
219 Ga0070694_100005679
220 Ga0070662_100007022
221 Ga0070681_10138286
222 Ga0068867_100006232
223 Ga0070679_100001682
224 Ga0070679_100006693
225 Ga0070679_100009487
226 Ga0070679_100260195
227 Ga0070684_100002808
228 Ga0070684_100101109
229 Ga0068853_100013471
230 Ga0070672_100001914
231 Ga0070686_100001149
232 Ga0070665_100004105
233 Ga0070704_100010303
234 Ga0070704_100034328
235 Ga0068855_100024266
236 Ga0068855_100047455
237 Ga0070664_100041905
238 Ga0068856_100267688
239 Ga0068852_100031359
240 Ga0068852_100040736
241 Ga0068852_100278467
242 Ga0068859_100000005
243 Ga0068859_100009462
244 Ga0068864_100006415
245 Ga0068864_100157222
246 Ga0068851_10001809
247 Ga0068863_100001100
248 Ga0068858_100009832
249 Ga0068860_100002897
250 Ga0068862_100047709
251 Ga0068862_100242128
252 Ga0081455_10003299
253 Ga0081540_1001244
254 Ga0081539_10012609
255 Ga0097621_100161168
256 Ga0068871_100017969
257 Ga0075428_100086970
258 Ga0075430_100027789
259 Ga0075430_100033913
260 Ga0075431_100002388
261 Ga0075433_10015028
262 Ga0075429_100000856
263 Ga0075436_100014766
264 Ga0097620_100000005
265 Ga0097620_100009462
266 Ga0075435_100060401
267 Ga0105240_10010583
268 Ga0105240_10050889
269 Ga0111539_10051966
270 Ga0111539_10244374
271 Ga0105247_10013968
272 Ga0114129_10001348
273 Ga0114129_10002130
274 Ga0114129_10383886
275 Ga0114129_10516409
276 Ga0105243_10002705
277 Ga0105241_10001033
278 Ga0105241_10222255
279 Ga0105238_10050335
280 Ga0105249_10299661
281 Ga0105239_10375086
282 Ga0157371_10061838
283 Ga0157370_10006784
284 Ga0157369_10023139
285 Ga0157369_10052146
286 Ga0157374_10003576
287 Ga0157374_10135797
288 Ga0157378_10003862
289 Ga0163162_10003581
290 Ga0157375_10002956
291 Ga0157375_10141094
292 Ga0157375_10227891
293 Ga0163163_10003557
294 Ga0163163_10071579
295 Ga0163163_10090368
296 Ga0157379_10003531
297 Ga0157376_10006779
298 Ga0207656_10018928
299 Ga0207680_10001467
300 Ga0207645_10047873
301 Ga0207705_10003033
302 Ga0207684_10064191
303 Ga0207707_10001394
304 Ga0207707_10202116
305 Ga0207695_10021263
306 Ga0207660_10003302
307 Ga0207652_10002281
308 Ga0207652_10025606
309 Ga0207652_10029119
310 Ga0207706_10007633
311 Ga0207706_10017317
312 Ga0207686_10037204
313 Ga0207709_10146279
314 Ga0207665_10034287
315 Ga0207691_10001432
316 Ga0207661_10008691
317 Ga0207661_10025057
318 Ga0207661_10029996
319 Ga0207651_10001070
320 Ga0207668_10000554
321 Ga0207658_10001247
322 Ga0207677_10000012
323 Ga0207677_10038704
324 Ga0207703_10002419
325 Ga0207639_10015458
326 Ga0207639_10023288
327 Ga0207641_10001203
328 Ga0207648_10011003
329 Ga0207676_10017564
330 Ga0207676_10062933
331 Ga0207674_10068126
332 Ga0207674_10239175
333 Ga0207675_100017899
334 Ga0207698_10046319
335 Ga0209967_1005553
336 Ga0207428_10012278
337 Ga0268266_10004266
338 Ga0268265_10154524
339 Ga0268264_10010336
340 Ga0307408_100103238
341 Ga0307405_10121100
342 Ga0307410_10004348
343 Ga0307406_10056799
344 Ga0307407_10022779
345 Ga0307409_100010109
346 Ga0307409_100230367
347 Ga0307416_100123350
348 Ga0307416_100204268
349 Ga0373926_0005712
350 Ga0373926_0035490
351 Ga0373956_0020730
352 Ga0373927_0022285
353 Ga0373947_0000005
354 Ga0373937_0022390
355 Ga0373937_0176344
356 Ga0373925_0041163
357 Ga0395900_0009112
358 Ga0453683_0102924
359 Ga0453684_0042641
360 Ga0451576_0041060
361 Ga0466967_0136208
362 Ga0495638_0003173
363 Ga0495618_0002457
364 Ga0495630_0212170
365 Ga0495586_0003030
366 Ga0495634_0007952
367 Ga0495635_0019941
368 Ga0495613_0002686
369 Ga0495680_0010326
370 Ga0495684_0064459
371 Ga0501032_0001957
372 Ga0501032_0103260
373 Ga0501039_0023231
374 Ga0501040_0019355
375 Ga0501041_0003541
376 Ga0501043_0127314
377 Ga0501046_0073923
378 Ga0501048_0006475
379 Ga0501072_0077389
380 Ga0501075_0007993
381 Ga0501076_0035185
382 Ga0501077_0005919
383 Ga0501080_0059183
384 Ga0501081_0033886
385 Ga0501045_0005807
386 nmdc:mga05p37_1339_c1
387 nmdc:mga09592_2621_c1
388 nmdc:mga0qj67_980_c1
389 nmdc:mga06r32_154129_c1
390 nmdc:mga06r32_4715_c1
391 nmdc:mga06r32_5899_c1
392 nmdc:mga08y16_1994_c1
393 nmdc:mga08x19_148347_c1
394 nmdc:mga08x19_17285_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c2w-assembly1.cif.gz_F kuenenia stuttgartiensis hydrazine synthase pressurized with 20 bar xenon 0.646 298 440
2vhd-assembly1.cif.gz_B crystal structure of the di-haem cytochrome c peroxidase from pseudomonas aeruginosa - mixed valence form 0.6224 228 440
2c1v-assembly1.cif.gz_B crystal structure of the di-haem cytochrome c peroxidase from paracoccus pantotrophus - mixed valence form 0.61 228 439
6fu3-assembly1.cif.gz_B structure of the mixed-valence, active form, of cytochrome c peroxidase from obligate human pathogenic bacterium neisseria gonorrhoeae 0.6089 212 439
3o5c-assembly2.cif.gz_C cytochrome c peroxidase bccp of shewanella oneidensis 0.6037 228 439
ID Description Score Start End Superfamily
af_P9WFP3_200_346_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.4599 121 154 3.10.580.10
2nyeB00 Alpha Beta;Roll;CBS-domain;CBS-domain 0.4561 117 152 3.10.580.10
4nkpD01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;Haem-degrading domain 0.3404 107 152 3.30.450.150
af_Q5AK78_118_196_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.2847 66 153 1.10.10.10
af_Q5AK78_118_196_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.2678 66 153 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A5B8UPC9-F1-model_v4 Cytochrome c domain-containing protein 0.9897 35 440 GO:0004130
GO:0009055
GO:0020037
GO:0046872
AF-A0A7Y6CF00-F1-model_v4 Cytochrome c domain-containing protein 0.9872 46 440 GO:0004130
GO:0009055
GO:0020037
GO:0046872
AF-A0A2V9WMZ3-F1-model_v4 Cytochrome c domain-containing protein 0.9865 38 440 GO:0004130
GO:0009055
GO:0020037
GO:0046872
AF-A0A6P0URF6-F1-model_v4 Cytochrome c domain-containing protein 0.9848 46 440 GO:0004130
GO:0009055
GO:0020037
GO:0046872
AF-A0A536U520-F1-model_v4 Cytochrome c domain-containing protein 0.9831 59 440 GO:0004130
GO:0009055
GO:0020037
GO:0046872

Map