F302292

General Info

Members Datasets Scaffolds Average Seq Length
196 150 392 276

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2866552031|2866555671
Length 315
Sequence IVLAQAGDVVGTGETVLFWVLGPLSLLGALGMVFARNAVHSALWLVLTMLSLGVLYMGQSAPFLGFTQIIVYTGAIMMLFLFVLMMVGRDSSDSVVEVLRGQRLWAGIGGVGLAALLVSGLARSLTSVQTAAPLDPWQPAGGGAGGLGRLIFTDYLFPFELTSALLITAAVGAMVLAYGGKGRGPRLSQRERANARFRSARPSPLPGPGVFATANSVAVPALLPDGSVAPESLSELLENLPAEELQEERRAVAGDEPEPDPHALTGEPEVPEQSGSGGAEEPVTEAEPEVPAPADPHGNGHSTARSEHATEEVHQ

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
76 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
77 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
78 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
81 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
86 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
87 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
92 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
93 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
96 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
97 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
98 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
99 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
100 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
119 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
120 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
121 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
122 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
129 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
130 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
131 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
132 2558860280 Kutzneria sp. 744 Isolate Unclassified
133 2582580736 Prauserella sp. Am3 Isolate Unclassified
134 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
135 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
136 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
137 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
138 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
139 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
140 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
141 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
142 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
143 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
144 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
145 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
146 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
147 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
148 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
149 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
150 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.78
Metatranscriptomes 0.51
Isolates 10.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.02
Nodule 0
Rhizoplane 9.18
Rhizosphere 68.37
Stem 0
Stem Tuber 0.51
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10004246 3300003203 Bacteria 6695
2 JGI25406J46586_10012547 3300003203 Bacteria 3672
3 Ga0068869_100192945 3300005334 Bacteria 1602
4 Ga0070666_10147640 3300005335 Bacteria 1639
5 Ga0070661_100538012 3300005344 Bacteria 939
6 Ga0070668_100005332 3300005347 Bacteria 9547
7 Ga0070668_100049331 3300005347 Bacteria 3239
8 Ga0070671_100001259 3300005355 Bacteria 18984
9 Ga0070671_100482910 3300005355 Bacteria 1065
10 Ga0070674_100140100 3300005356 Bacteria 1814
11 Ga0070673_100314280 3300005364 Bacteria 1382
12 Ga0070667_100378212 3300005367 Bacteria 1286
13 Ga0070714_100854256 3300005435 Bacteria 883
14 Ga0070713_100159910 3300005436 Bacteria 2010
15 Ga0070713_100263572 3300005436 Bacteria 1575
16 Ga0070701_10090095 3300005438 Bacteria 1679
17 Ga0070663_100148687 3300005455 Bacteria 1794
18 Ga0068867_100521547 3300005459 Bacteria 1025
19 Ga0070685_10123665 3300005466 Bacteria 1609
20 Ga0068853_100059604 3300005539 Bacteria 3298
21 Ga0070686_100176546 3300005544 Bacteria 1515
22 Ga0070665_100000971 3300005548 Bacteria 36404
23 Ga0070665_100107931 3300005548 Bacteria 2786
24 Ga0070665_100259395 3300005548 Bacteria 1739
25 Ga0068855_100775520 3300005563 Bacteria 1021
26 Ga0068854_100010809 3300005578 Bacteria 5923
27 Ga0068852_100178814 3300005616 Bacteria 1993
28 Ga0068870_10132746 3300005840 Bacteria 1448
29 Ga0068863_100050302 3300005841 Bacteria 3951
30 Ga0068863_100836907 3300005841 Bacteria 919
31 Ga0068858_100231139 3300005842 Bacteria 1753
32 Ga0068860_100008955 3300005843 Bacteria 9970
33 Ga0068862_100022010 3300005844 Bacteria 5332
34 Ga0081455_10000071 3300005937 Bacteria 110373
35 Ga0081455_10091239 3300005937 Bacteria 2468
36 Ga0081539_10000086 3300005985 Bacteria 217801
37 Ga0081539_10000763 3300005985 Bacteria 63498
38 Ga0081539_10068368 3300005985 Bacteria 1917
39 Ga0070716_100314365 3300006173 Bacteria 1095
40 Ga0075428_100365003 3300006844 Bacteria 1549
41 Ga0068865_100568318 3300006881 Bacteria 954
42 Ga0075435_100702702 3300007076 Bacteria 879
43 Ga0111539_10041868 3300009094 Bacteria 5504
44 Ga0105247_10017099 3300009101 Bacteria 4353
45 Ga0105243_10280546 3300009148 Bacteria 1500
46 Ga0105248_10116784 3300009177 Bacteria 3009
47 Ga0105238_10380517 3300009551 Bacteria 1403
48 Ga0105032_100500 3300009979 Bacteria 3932
49 Ga0157371_10078242 3300013102 Bacteria 2342
50 Ga0157369_10435279 3300013105 Bacteria 1359
51 Ga0157369_10701712 3300013105 Bacteria 1042
52 Ga0157374_10654149 3300013296 Bacteria 1063
53 Ga0157378_10170259 3300013297 Bacteria 2042
54 Ga0157375_10174666 3300013308 Bacteria 2297
55 Ga0157379_10008843 3300014968 Bacteria 8783
56 Ga0206353_12025705 3300020082 Bacteria 1169
57 Ga0213873_10000037 3300021358 Bacteria 34798
58 Ga0213875_10000336 3300021388 Bacteria 44356
59 Ga0213875_10074285 3300021388 Bacteria 1586
60 Ga0207656_10074964 3300025321 Bacteria 1510
61 Ga0207688_10230558 3300025901 Bacteria 1118
62 Ga0207645_10089924 3300025907 Bacteria 1974
63 Ga0207643_10005494 3300025908 Bacteria 6776
64 Ga0207654_10132776 3300025911 Bacteria 1578
65 Ga0207662_10012986 3300025918 Bacteria 4651
66 Ga0207657_10011676 3300025919 Bacteria 8706
67 Ga0207694_10025612 3300025924 Bacteria 4484
68 Ga0207694_10096435 3300025924 Bacteria 2339
69 Ga0207700_10138886 3300025928 Bacteria 1994
70 Ga0207664_10541663 3300025929 Bacteria 1044
71 Ga0207644_10000976 3300025931 Bacteria 18277
72 Ga0207706_10010285 3300025933 Bacteria 8555
73 Ga0207704_10251626 3300025938 Bacteria 1327
74 Ga0207665_10232872 3300025939 Bacteria 1354
75 Ga0207689_10027190 3300025942 Bacteria 4790
76 Ga0207667_10275148 3300025949 Bacteria 1721
77 Ga0207712_10283564 3300025961 Bacteria 1353
78 Ga0207677_10225019 3300026023 Bacteria 1507
79 Ga0207639_10061240 3300026041 Bacteria 2906
80 Ga0207678_10000657 3300026067 Bacteria 31782
81 Ga0207678_10059606 3300026067 Bacteria 3284
82 Ga0207678_10139368 3300026067 Bacteria 2070
83 Ga0207708_10012047 3300026075 Bacteria 6445
84 Ga0207708_10047109 3300026075 Bacteria 3283
85 Ga0207641_10012309 3300026088 Bacteria 7019
86 Ga0207641_10170430 3300026088 Bacteria 1986
87 Ga0207641_10352679 3300026088 Bacteria 1403
88 Ga0207676_10434504 3300026095 Bacteria 1234
89 Ga0207675_100295414 3300026118 Bacteria 1577
90 Ga0207428_10116611 3300027907 Bacteria 2050
91 Ga0268266_10009382 3300028379 Bacteria 8621
92 Ga0268264_10006899 3300028381 Bacteria 9532
93 Ga0307511_10000590 3300030521 Bacteria 38846
94 Ga0307512_10006273 3300030522 Bacteria 12089
95 Ga0307513_10011959 3300031456 Bacteria 10748
96 Ga0307513_10028926 3300031456 Bacteria 6328
97 Ga0307509_10065754 3300031507 Bacteria 3806
98 Ga0307405_10206454 3300031731 Bacteria 1431
99 Ga0307413_10001261 3300031824 Bacteria 9448
100 Ga0307518_10004772 3300031838 Bacteria 9704
101 Ga0307518_10269619 3300031838 Bacteria 1064
102 Ga0307410_10307136 3300031852 Bacteria 1254
103 Ga0307407_10306770 3300031903 Bacteria 1109
104 Ga0307409_100212474 3300031995 Bacteria 1740
105 Ga0307409_100430804 3300031995 Bacteria 1268
106 Ga0307507_10041082 3300033179 Bacteria 4634
107 Ga0307507_10104469 3300033179 Bacteria 2351
108 Ga0307510_10020268 3300033180 Bacteria 7776
109 Ga0373939_0046920 3300035114 Bacteria 1325
110 Ga0373925_0085824 3300037068 Bacteria 2400
111 Ga0436364_0516238 3300037853 Bacteria 122645
112 Ga0436364_0823558 3300037853 Bacteria 25963
113 Ga0436364_0847750 3300037853 Bacteria 9530
114 Ga0436365_0432214 3300039437 Bacteria 2894
115 Ga0436365_0954918 3300039437 Bacteria 9636
116 Ga0436365_1490258 3300039437 Bacteria 8939
117 Ga0436365_1498965 3300039437 Bacteria 1238
118 Ga0436362_0884990 3300039453 Bacteria 27774
119 Ga0466972_0003210 3300044658 Bacteria 8118
120 Ga0466972_0009133 3300044658 Bacteria 4978
121 Ga0466965_0000194 3300044683 Bacteria 18907
122 Ga0466966_0000436 3300044684 Bacteria 26836
123 Ga0466961_0002808 3300044693 Bacteria 10832
124 Ga0466963_0000236 3300044694 Bacteria 23896
125 Ga0466963_0071757 3300044694 Bacteria 2331
126 Ga0466964_0011186 3300044706 Bacteria 3389
127 Ga0466971_0007076 3300044719 Bacteria 4884
128 Ga0466971_0055014 3300044719 Bacteria 1793
129 Ga0466968_0000188 3300044735 Bacteria 18761
130 Ga0466970_0029401 3300044765 Bacteria 2892
131 Ga0466970_0030356 3300044765 Bacteria 2850
132 Ga0466970_0035258 3300044765 Bacteria 2651
133 Ga0466970_0072763 3300044765 Bacteria 1849
134 Ga0466957_0002078 3300044842 Bacteria 10712
135 Ga0466957_0245448 3300044842 Bacteria 1189
136 Ga0466960_0000703 3300044901 Bacteria 11662
137 Ga0466960_0047659 3300044901 Bacteria 2056
138 Ga0466959_0004512 3300045049 Bacteria 9333
139 Ga0466958_0003063 3300045836 Bacteria 8568
140 Ga0466958_0059350 3300045836 Bacteria 2327
141 Ga0466967_0000595 3300045976 Bacteria 17954
142 Ga0466967_0030818 3300045976 Bacteria 4505
143 Ga0466967_0051714 3300045976 Bacteria 3602
144 Ga0466967_0066684 3300045976 Bacteria 3208
145 Ga0466967_0292011 3300045976 Bacteria 1567
146 Ga0496100_0009333 3300048903 Bacteria 5513
147 Ga0496102_0000048 3300048905 Bacteria 179713
148 Ga0496102_0070658 3300048905 Bacteria 3206
149 Ga0496103_0000018 3300048906 Bacteria 239585
150 Ga0496104_0019028 3300048907 Bacteria 6275
151 Ga0496104_0679175 3300048907 Bacteria 938
152 Ga0496105_0415538 3300048908 Bacteria 1066
153 Ga0496105_0425695 3300048908 Bacteria 1050
154 Ga0496106_0592017 3300048909 Bacteria 889
155 Ga0496107_0014665 3300048910 Bacteria 5487
156 Ga0496107_0302403 3300048910 Bacteria 1191
157 Ga0496108_0147626 3300048911 Bacteria 2028
158 Ga0496109_0019128 3300048912 Bacteria 6033
159 Ga0496110_0250933 3300048913 Bacteria 1610
160 Ga0496110_0360075 3300048913 Bacteria 1325
161 Ga0496111_0168864 3300048914 Bacteria 1625
162 Ga0496111_0332465 3300048914 Bacteria 1125
163 Ga0496114_0136805 3300048917 Bacteria 2119
164 Ga0496116_0000173 3300048919 Bacteria 129928
165 Ga0496117_0000144 3300048920 Bacteria 153831
166 Ga0496118_0000466 3300048921 Bacteria 67173
167 Ga0496119_0001560 3300048922 Bacteria 27295
168 Ga0496120_0002291 3300048923 Bacteria 19857
169 Ga0496121_0016365 3300048924 Bacteria 7662
170 Ga0496124_0005946 3300048927 Bacteria 13489
171 Ga0496126_0000677 3300048929 Bacteria 62685
172 Ga0501034_0547910 3300049571 Bacteria 1066
173 nmdc:mga06r32_692_c2 3300050510 Bacteria 9353
174 Ga0500559_0007335 3300053136 Bacteria 4893
175 Ga0500577_0006303 3300053142 Bacteria 3261
176 2866555671 2866552031 Bacteria 5824618
177 2558912607 2558860112 Bacteria 9931328
178 2559428656 2558860280 Bacteria 11429938
179 2583148900 2582580736 Bacteria 5325865
180 2586064683 2585427649 Bacteria 9053857
181 2791914406 2791354901 Bacteria 8322202
182 2795781351 2795385470 Bacteria 8317180
183 2795791682 2795385472 Bacteria 6627535
184 2809586089 2808606522 Bacteria 9488490
185 2863070223 2863067949 Bacteria 8541735
186 2866617233 2866612099 Bacteria 7543886
187 2870788459 2870782633 Bacteria 9624083
188 2891331587 2891326441 Bacteria 6439512
189 2899364791 2899359706 Bacteria 10940472
190 2899373777 2899370129 Bacteria 6781179
191 2915358473 2915358134 Bacteria 6050864
192 2915768527 2915768154 Bacteria 8424322
193 2917741258 2917736166 Bacteria 9690793
194 8003316409 8003314358 Bacteria 10575343
195 8054473479 8054472261 Bacteria 7464355
196 8056212437 8056207758 Bacteria 8639239
197 JGI25406J46586_10004246
198 JGI25406J46586_10012547
199 Ga0068869_100192945
200 Ga0070666_10147640
201 Ga0070661_100538012
202 Ga0070668_100005332
203 Ga0070668_100049331
204 Ga0070671_100001259
205 Ga0070671_100482910
206 Ga0070674_100140100
207 Ga0070673_100314280
208 Ga0070667_100378212
209 Ga0070714_100854256
210 Ga0070713_100159910
211 Ga0070713_100263572
212 Ga0070701_10090095
213 Ga0070663_100148687
214 Ga0068867_100521547
215 Ga0070685_10123665
216 Ga0068853_100059604
217 Ga0070686_100176546
218 Ga0070665_100000971
219 Ga0070665_100107931
220 Ga0070665_100259395
221 Ga0068855_100775520
222 Ga0068854_100010809
223 Ga0068852_100178814
224 Ga0068870_10132746
225 Ga0068863_100050302
226 Ga0068863_100836907
227 Ga0068858_100231139
228 Ga0068860_100008955
229 Ga0068862_100022010
230 Ga0081455_10000071
231 Ga0081455_10091239
232 Ga0081539_10000086
233 Ga0081539_10000763
234 Ga0081539_10068368
235 Ga0070716_100314365
236 Ga0075428_100365003
237 Ga0068865_100568318
238 Ga0075435_100702702
239 Ga0111539_10041868
240 Ga0105247_10017099
241 Ga0105243_10280546
242 Ga0105248_10116784
243 Ga0105238_10380517
244 Ga0105032_100500
245 Ga0157371_10078242
246 Ga0157369_10435279
247 Ga0157369_10701712
248 Ga0157374_10654149
249 Ga0157378_10170259
250 Ga0157375_10174666
251 Ga0157379_10008843
252 Ga0206353_12025705
253 Ga0213873_10000037
254 Ga0213875_10000336
255 Ga0213875_10074285
256 Ga0207656_10074964
257 Ga0207688_10230558
258 Ga0207645_10089924
259 Ga0207643_10005494
260 Ga0207654_10132776
261 Ga0207662_10012986
262 Ga0207657_10011676
263 Ga0207694_10025612
264 Ga0207694_10096435
265 Ga0207700_10138886
266 Ga0207664_10541663
267 Ga0207644_10000976
268 Ga0207706_10010285
269 Ga0207704_10251626
270 Ga0207665_10232872
271 Ga0207689_10027190
272 Ga0207667_10275148
273 Ga0207712_10283564
274 Ga0207677_10225019
275 Ga0207639_10061240
276 Ga0207678_10000657
277 Ga0207678_10059606
278 Ga0207678_10139368
279 Ga0207708_10012047
280 Ga0207708_10047109
281 Ga0207641_10012309
282 Ga0207641_10170430
283 Ga0207641_10352679
284 Ga0207676_10434504
285 Ga0207675_100295414
286 Ga0207428_10116611
287 Ga0268266_10009382
288 Ga0268264_10006899
289 Ga0307511_10000590
290 Ga0307512_10006273
291 Ga0307513_10011959
292 Ga0307513_10028926
293 Ga0307509_10065754
294 Ga0307405_10206454
295 Ga0307413_10001261
296 Ga0307518_10004772
297 Ga0307518_10269619
298 Ga0307410_10307136
299 Ga0307407_10306770
300 Ga0307409_100212474
301 Ga0307409_100430804
302 Ga0307507_10041082
303 Ga0307507_10104469
304 Ga0307510_10020268
305 Ga0373939_0046920
306 Ga0373925_0085824
307 Ga0436364_0516238
308 Ga0436364_0823558
309 Ga0436364_0847750
310 Ga0436365_0432214
311 Ga0436365_0954918
312 Ga0436365_1490258
313 Ga0436365_1498965
314 Ga0436362_0884990
315 Ga0466972_0003210
316 Ga0466972_0009133
317 Ga0466965_0000194
318 Ga0466966_0000436
319 Ga0466961_0002808
320 Ga0466963_0000236
321 Ga0466963_0071757
322 Ga0466964_0011186
323 Ga0466971_0007076
324 Ga0466971_0055014
325 Ga0466968_0000188
326 Ga0466970_0029401
327 Ga0466970_0030356
328 Ga0466970_0035258
329 Ga0466970_0072763
330 Ga0466957_0002078
331 Ga0466957_0245448
332 Ga0466960_0000703
333 Ga0466960_0047659
334 Ga0466959_0004512
335 Ga0466958_0003063
336 Ga0466958_0059350
337 Ga0466967_0000595
338 Ga0466967_0030818
339 Ga0466967_0051714
340 Ga0466967_0066684
341 Ga0466967_0292011
342 Ga0496100_0009333
343 Ga0496102_0000048
344 Ga0496102_0070658
345 Ga0496103_0000018
346 Ga0496104_0019028
347 Ga0496104_0679175
348 Ga0496105_0415538
349 Ga0496105_0425695
350 Ga0496106_0592017
351 Ga0496107_0014665
352 Ga0496107_0302403
353 Ga0496108_0147626
354 Ga0496109_0019128
355 Ga0496110_0250933
356 Ga0496110_0360075
357 Ga0496111_0168864
358 Ga0496111_0332465
359 Ga0496114_0136805
360 Ga0496116_0000173
361 Ga0496117_0000144
362 Ga0496118_0000466
363 Ga0496119_0001560
364 Ga0496120_0002291
365 Ga0496121_0016365
366 Ga0496124_0005946
367 Ga0496126_0000677
368 Ga0501034_0547910
369 nmdc:mga06r32_692_c2
370 Ga0500559_0007335
371 Ga0500577_0006303
372 2866555671
373 2558912607
374 2559428656
375 2583148900
376 2586064683
377 2791914406
378 2795781351
379 2795791682
380 2809586089
381 2863070223
382 2866617233
383 2870788459
384 2891331587
385 2899364791
386 2899373777
387 2915358473
388 2915768527
389 2917741258
390 8003316409
391 8054473479
392 8056212437

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00499

Oxidored_q3

NADH-ubiquinone/plastoquinone oxidoreductase chain 6

28

176

0.95

Map