F302277

General Info

Members Datasets Scaffolds Average Seq Length
196 132 392 255

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2773857933|2774901695
Length 301
Sequence SVTDGVPDPRAAAPAAGGRPTPRQVTLLASLLLAPNPSPMTLDGTNTWILRAPGATGCVVVDPGPPDPGHLAAIVAAGPVDVILLTHGHIDHSEGAAPLHELTSAPVRALDVAHRLGDEGLTEGDVIAAAGVEIRVLATPGHSSDSLSFVLTDDRRADTDSTDSHNISAPTAGSSVLTGDTILGRGTTVVAHPDGQLGDYLTSLRRLRELGDCVVLPGHGPHLPAAGRAAEAYLAHREARLDQVRAALAAGDSTVRQIVQRIYTDVDRALWPAAEMSVRAQIEHLHQRRELRTTPXELLLA

Samples

Sample ID Description Type Environment
1 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
62 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
63 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
64 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
78 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
79 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
80 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
81 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
91 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
92 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
100 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
101 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
102 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
103 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
104 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
108 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
109 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
111 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
112 2773857933 Frankia sp. BMG5.30 Isolate Nodule
113 2501939600 Micromonospora sp. L5 Isolate Unclassified
114 2506783011 Frankia datiscae Dg1 Isolate Nodule
115 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
116 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
117 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
118 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
119 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
120 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
121 2858868258 Micromonospora sp. MH33 Isolate Unclassified
122 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
123 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
124 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
125 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
126 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
127 2902582711 Micromonospora sp. AP08 Isolate Unclassified
128 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
129 2922554459 Rhodococcus sp. 66b Isolate Unclassified
130 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
131 649633069 Micromonospora sp. L5 Isolate Unclassified
132 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.73
Metatranscriptomes 2.55
Isolates 10.71

Biome Distribution

Category Percentage (%)
Aerial Root 0.51
Bulb 0
Endosphere 3.57
Nodule 1.02
Rhizoplane 0.51
Rhizosphere 83.16
Stem 0
Stem Tuber 0.51
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25405J52794_10024639 3300003911 Bacteria 1230
2 Ga0070658_10001233 3300005327 Bacteria 21931
3 Ga0070658_10033388 3300005327 Bacteria 4139
4 Ga0070658_10345485 3300005327 Bacteria 1273
5 Ga0070683_100076685 3300005329 Bacteria 3125
6 Ga0070683_100116329 3300005329 Bacteria 2524
7 Ga0070680_100000764 3300005336 Bacteria 22523
8 Ga0070680_100001364 3300005336 Bacteria 17666
9 Ga0070680_100023415 3300005336 Bacteria 4925
10 Ga0070680_100030359 3300005336 Bacteria 4342
11 Ga0070660_100003538 3300005339 Bacteria 10778
12 Ga0070661_100641387 3300005344 Bacteria 861
13 Ga0070668_100006347 3300005347 Bacteria 8758
14 Ga0070659_100391986 3300005366 Bacteria 1171
15 Ga0070713_100064101 3300005436 Bacteria 3083
16 Ga0070694_100489829 3300005444 Bacteria 977
17 Ga0070663_100115886 3300005455 Bacteria 2019
18 Ga0070663_100625662 3300005455 Bacteria 908
19 Ga0070681_10000699 3300005458 Bacteria 27854
20 Ga0070681_10002284 3300005458 Bacteria 17519
21 Ga0070681_10005990 3300005458 Bacteria 11783
22 Ga0070681_10152716 3300005458 Bacteria 2235
23 Ga0070681_10408490 3300005458 Bacteria 1269
24 Ga0070699_100236893 3300005518 Bacteria 1628
25 Ga0070679_100000016 3300005530 Bacteria 139454
26 Ga0070679_100004742 3300005530 Bacteria 12541
27 Ga0070679_100085506 3300005530 Bacteria 3141
28 Ga0070684_100122065 3300005535 Bacteria 2344
29 Ga0070684_100134022 3300005535 Bacteria 2236
30 Ga0070686_100042662 3300005544 Bacteria 2843
31 Ga0068855_100644759 3300005563 Bacteria 1138
32 Ga0068856_100194425 3300005614 Bacteria 2043
33 Ga0068852_100039561 3300005616 Bacteria 3971
34 Ga0068859_100129395 3300005617 Bacteria 2595
35 Ga0068864_100887004 3300005618 Bacteria 880
36 Ga0068862_100383448 3300005844 Bacteria 1311
37 Ga0081455_10007072 3300005937 Bacteria 11912
38 Ga0081540_1006357 3300005983 Bacteria 8626
39 Ga0081539_10003836 3300005985 Bacteria 17650
40 Ga0075365_10004210 3300006038 Bacteria 7579
41 Ga0075364_10154656 3300006051 Bacteria 1547
42 Ga0075370_10220669 3300006353 Bacteria 1120
43 Ga0075428_100009631 3300006844 Bacteria 10726
44 Ga0075430_100020345 3300006846 Bacteria 5646
45 Ga0075429_100005947 3300006880 Bacteria 10533
46 Ga0075429_100083300 3300006880 Bacteria 2788
47 Ga0075429_100301739 3300006880 Bacteria 1402
48 Ga0097620_100129399 3300006931 Bacteria 2595
49 Ga0111539_10286562 3300009094 Bacteria 1917
50 Ga0105245_10083351 3300009098 Bacteria 2927
51 Ga0105245_10126088 3300009098 Bacteria 2397
52 Ga0114129_10013281 3300009147 Bacteria 11735
53 Ga0114129_10127497 3300009147 Bacteria 3498
54 Ga0114129_10738225 3300009147 Bacteria 1261
55 Ga0105242_10008688 3300009176 Bacteria 7795
56 Ga0105033_106249 3300009986 Bacteria 1029
57 Ga0157369_10022946 3300013105 Bacteria 6959
58 Ga0157369_10026672 3300013105 Bacteria 6407
59 Ga0197907_10957261 3300020069 Bacteria 2519
60 Ga0206356_10653189 3300020070 Bacteria 2121
61 Ga0206354_10683252 3300020081 Bacteria 1616
62 Ga0206354_11027066 3300020081 Bacteria 12134
63 Ga0206353_10693210 3300020082 Bacteria 21014
64 Ga0213875_10004843 3300021388 Bacteria 7310
65 Ga0207705_10006789 3300025909 Bacteria 8457
66 Ga0207705_10061365 3300025909 Bacteria 2716
67 Ga0207705_10072790 3300025909 Bacteria 2493
68 Ga0207707_10000185 3300025912 Bacteria 65663
69 Ga0207707_10002511 3300025912 Bacteria 16511
70 Ga0207707_10189863 3300025912 Bacteria 1792
71 Ga0207707_10404396 3300025912 Bacteria 1172
72 Ga0207660_10000798 3300025917 Bacteria 20838
73 Ga0207660_10002789 3300025917 Bacteria 11447
74 Ga0207660_10175828 3300025917 Bacteria 1660
75 Ga0207657_10076808 3300025919 Bacteria 2816
76 Ga0207657_10116318 3300025919 Bacteria 2203
77 Ga0207657_10486107 3300025919 Bacteria 967
78 Ga0207652_10000272 3300025921 Bacteria 53831
79 Ga0207652_10001048 3300025921 Bacteria 25276
80 Ga0207694_10453556 3300025924 Bacteria 1070
81 Ga0207687_10065487 3300025927 Bacteria 2580
82 Ga0207700_10035351 3300025928 Bacteria 3598
83 Ga0207686_10171339 3300025934 Bacteria 1531
84 Ga0207686_10578601 3300025934 Bacteria 881
85 Ga0207689_10106919 3300025942 Bacteria 2299
86 Ga0207661_10004342 3300025944 Bacteria 9926
87 Ga0207661_10121894 3300025944 Bacteria 2221
88 Ga0207661_10355416 3300025944 Bacteria 1323
89 Ga0207668_10001125 3300025972 Bacteria 15954
90 Ga0207678_10199828 3300026067 Bacteria 1709
91 Ga0207676_10671182 3300026095 Bacteria 1002
92 Ga0207674_10076371 3300026116 Bacteria 3358
93 Ga0207698_10016572 3300026142 Bacteria 4972
94 Ga0268265_10514338 3300028380 Bacteria 1130
95 Ga0307515_10006204 3300028794 Bacteria 24011
96 Ga0307515_10113972 3300028794 Bacteria 3129
97 Ga0307512_10018809 3300030522 Bacteria 6305
98 Ga0307512_10051876 3300030522 Bacteria 3277
99 Ga0307508_10047811 3300031616 Bacteria 3813
100 Ga0307516_10002670 3300031730 Bacteria 23583
101 Ga0307516_10147794 3300031730 Bacteria 2114
102 Ga0307416_100152887 3300032002 Bacteria 2120
103 Ga0307507_10076803 3300033179 Bacteria 2976
104 Ga0436364_0693135 3300037853 Bacteria 33773
105 Ga0466972_0093148 3300044658 Bacteria 1428
106 Ga0466965_0101149 3300044683 Bacteria 1474
107 Ga0466966_0017946 3300044684 Bacteria 4673
108 Ga0466966_0465111 3300044684 Bacteria 760
109 Ga0466961_0018814 3300044693 Bacteria 4444
110 Ga0466961_0064981 3300044693 Bacteria 2319
111 Ga0466961_0190612 3300044693 Bacteria 1271
112 Ga0466961_0250675 3300044693 Bacteria 1087
113 Ga0466961_0268239 3300044693 Bacteria 1046
114 Ga0466963_0031975 3300044694 Bacteria 3404
115 Ga0466963_0453697 3300044694 Bacteria 905
116 Ga0466963_0506802 3300044694 Bacteria 852
117 Ga0466959_0042739 3300045049 Bacteria 3343
118 Ga0466959_0167218 3300045049 Bacteria 1544
119 Ga0466959_0259527 3300045049 Bacteria 1196
120 Ga0466958_0021091 3300045836 Bacteria 3804
121 Ga0466967_0075785 3300045976 Bacteria 3024
122 Ga0466967_0232914 3300045976 Bacteria 1754
123 Ga0466967_0247632 3300045976 Bacteria 1701
124 Ga0495603_0431432 3300046455 Bacteria 755
125 Ga0495588_0061997 3300046674 Bacteria 1938
126 Ga0495581_0053818 3300047315 Bacteria 2324
127 Ga0496104_0860666 3300048907 Bacteria 812
128 Ga0496125_0103850 3300048928 Bacteria 2084
129 Ga0501032_0056347 3300049569 Bacteria 2642
130 Ga0501032_0176583 3300049569 Bacteria 1399
131 Ga0501034_0002062 3300049571 Bacteria 25117
132 Ga0501034_0474898 3300049571 Bacteria 1166
133 Ga0501037_0021013 3300049573 Bacteria 4822
134 Ga0501037_0212706 3300049573 Bacteria 1363
135 Ga0501037_0226303 3300049573 Bacteria 1314
136 Ga0501038_0209973 3300049574 Bacteria 1558
137 Ga0501039_0094226 3300049575 Bacteria 2334
138 Ga0501042_0005052 3300049578 Bacteria 8461
139 Ga0501043_0004730 3300049579 Bacteria 11040
140 Ga0501047_0090397 3300049581 Bacteria 2938
141 Ga0501048_0003236 3300049582 Bacteria 12410
142 Ga0501069_0000378 3300049585 Bacteria 20130
143 Ga0501070_0002568 3300049586 Bacteria 15892
144 Ga0501070_0005296 3300049586 Bacteria 11007
145 Ga0501070_0077447 3300049586 Bacteria 2752
146 Ga0501071_0334122 3300049587 Bacteria 1152
147 Ga0501071_0434683 3300049587 Bacteria 1004
148 Ga0501073_0022482 3300049589 Bacteria 4540
149 Ga0501073_0103548 3300049589 Bacteria 1976
150 Ga0501073_0150272 3300049589 Bacteria 1614
151 Ga0501074_0000603 3300049590 Bacteria 22308
152 Ga0501074_0006130 3300049590 Bacteria 8683
153 Ga0501074_0155422 3300049590 Bacteria 1634
154 Ga0501075_0289604 3300049591 Bacteria 1248
155 Ga0501079_0000775 3300049741 Bacteria 21903
156 Ga0501080_0000216 3300049742 Bacteria 42846
157 Ga0501080_0009291 3300049742 Bacteria 8965
158 Ga0501080_0099260 3300049742 Bacteria 2702
159 Ga0501044_0005120 3300049823 Bacteria 14623
160 Ga0501045_0133069 3300049824 Bacteria 1849
161 nmdc:mga0yw44_3522_c1 3300050492 Bacteria 6973
162 nmdc:mga07m45_479274_c1 3300050496 Bacteria 721
163 nmdc:mga05p37_15233_c1 3300050507 Bacteria 9236
164 nmdc:mga05p37_79691_c1 3300050507 Bacteria 4033
165 nmdc:mga09592_42455_c1 3300050508 Bacteria 3825
166 nmdc:mga09592_57454_c1 3300050508 Bacteria 3288
167 nmdc:mga0qj67_91496_c1 3300050509 Bacteria 2445
168 nmdc:mga06r32_63163_c1 3300050510 Bacteria 3569
169 nmdc:mga08y16_448420_c1 3300050511 Bacteria 1316
170 Ga0495619_0017511 3300053085 Bacteria 4537
171 Ga0500643_000826 3300053087 Bacteria 19993
172 Ga0500630_070002 3300053159 Bacteria 1661
173 Ga0501084_0069759 3300054114 Bacteria 2943
174 Ga0501084_0789686 3300054114 Bacteria 800
175 Ga0501082_0181452 3300060353 Bacteria 1831
176 2774901695 2773857933 Bacteria 5818019
177 2501941891 2501939600 Bacteria 6907073
178 2506868888 2506783011 Bacteria 5323186
179 2566994940 2565956761 Bacteria 6601618
180 2623585481 2622736626 Bacteria 7181580
181 2738890892 2738541308 Bacteria 7020677
182 2753075200 2751185734 Bacteria 8863695
183 2795793901 2795385472 Bacteria 6627535
184 2856859393 2856858025 Bacteria 7255264
185 2858872129 2858868258 Bacteria 7683772
186 2858902537 2858902515 Bacteria 7086037
187 2866616466 2866612099 Bacteria 7543886
188 2867306269 2867302475 Bacteria 7087181
189 2870728489 2870721527 Bacteria 9689237
190 2899373023 2899370129 Bacteria 6781179
191 2902585765 2902582711 Bacteria 6187705
192 2904535911 2904535858 Bacteria 6308016
193 2922556053 2922554459 Bacteria 6683962
194 2984593456 2984592036 Bacteria 3670284
195 649812742 649633069 Bacteria 6962533
196 8057573693 8057568493 Bacteria 7221719
197 JGI25405J52794_10024639
198 Ga0070658_10001233
199 Ga0070658_10033388
200 Ga0070658_10345485
201 Ga0070683_100076685
202 Ga0070683_100116329
203 Ga0070680_100000764
204 Ga0070680_100001364
205 Ga0070680_100023415
206 Ga0070680_100030359
207 Ga0070660_100003538
208 Ga0070661_100641387
209 Ga0070668_100006347
210 Ga0070659_100391986
211 Ga0070713_100064101
212 Ga0070694_100489829
213 Ga0070663_100115886
214 Ga0070663_100625662
215 Ga0070681_10000699
216 Ga0070681_10002284
217 Ga0070681_10005990
218 Ga0070681_10152716
219 Ga0070681_10408490
220 Ga0070699_100236893
221 Ga0070679_100000016
222 Ga0070679_100004742
223 Ga0070679_100085506
224 Ga0070684_100122065
225 Ga0070684_100134022
226 Ga0070686_100042662
227 Ga0068855_100644759
228 Ga0068856_100194425
229 Ga0068852_100039561
230 Ga0068859_100129395
231 Ga0068864_100887004
232 Ga0068862_100383448
233 Ga0081455_10007072
234 Ga0081540_1006357
235 Ga0081539_10003836
236 Ga0075365_10004210
237 Ga0075364_10154656
238 Ga0075370_10220669
239 Ga0075428_100009631
240 Ga0075430_100020345
241 Ga0075429_100005947
242 Ga0075429_100083300
243 Ga0075429_100301739
244 Ga0097620_100129399
245 Ga0111539_10286562
246 Ga0105245_10083351
247 Ga0105245_10126088
248 Ga0114129_10013281
249 Ga0114129_10127497
250 Ga0114129_10738225
251 Ga0105242_10008688
252 Ga0105033_106249
253 Ga0157369_10022946
254 Ga0157369_10026672
255 Ga0197907_10957261
256 Ga0206356_10653189
257 Ga0206354_10683252
258 Ga0206354_11027066
259 Ga0206353_10693210
260 Ga0213875_10004843
261 Ga0207705_10006789
262 Ga0207705_10061365
263 Ga0207705_10072790
264 Ga0207707_10000185
265 Ga0207707_10002511
266 Ga0207707_10189863
267 Ga0207707_10404396
268 Ga0207660_10000798
269 Ga0207660_10002789
270 Ga0207660_10175828
271 Ga0207657_10076808
272 Ga0207657_10116318
273 Ga0207657_10486107
274 Ga0207652_10000272
275 Ga0207652_10001048
276 Ga0207694_10453556
277 Ga0207687_10065487
278 Ga0207700_10035351
279 Ga0207686_10171339
280 Ga0207686_10578601
281 Ga0207689_10106919
282 Ga0207661_10004342
283 Ga0207661_10121894
284 Ga0207661_10355416
285 Ga0207668_10001125
286 Ga0207678_10199828
287 Ga0207676_10671182
288 Ga0207674_10076371
289 Ga0207698_10016572
290 Ga0268265_10514338
291 Ga0307515_10006204
292 Ga0307515_10113972
293 Ga0307512_10018809
294 Ga0307512_10051876
295 Ga0307508_10047811
296 Ga0307516_10002670
297 Ga0307516_10147794
298 Ga0307416_100152887
299 Ga0307507_10076803
300 Ga0436364_0693135
301 Ga0466972_0093148
302 Ga0466965_0101149
303 Ga0466966_0017946
304 Ga0466966_0465111
305 Ga0466961_0018814
306 Ga0466961_0064981
307 Ga0466961_0190612
308 Ga0466961_0250675
309 Ga0466961_0268239
310 Ga0466963_0031975
311 Ga0466963_0453697
312 Ga0466963_0506802
313 Ga0466959_0042739
314 Ga0466959_0167218
315 Ga0466959_0259527
316 Ga0466958_0021091
317 Ga0466967_0075785
318 Ga0466967_0232914
319 Ga0466967_0247632
320 Ga0495603_0431432
321 Ga0495588_0061997
322 Ga0495581_0053818
323 Ga0496104_0860666
324 Ga0496125_0103850
325 Ga0501032_0056347
326 Ga0501032_0176583
327 Ga0501034_0002062
328 Ga0501034_0474898
329 Ga0501037_0021013
330 Ga0501037_0212706
331 Ga0501037_0226303
332 Ga0501038_0209973
333 Ga0501039_0094226
334 Ga0501042_0005052
335 Ga0501043_0004730
336 Ga0501047_0090397
337 Ga0501048_0003236
338 Ga0501069_0000378
339 Ga0501070_0002568
340 Ga0501070_0005296
341 Ga0501070_0077447
342 Ga0501071_0334122
343 Ga0501071_0434683
344 Ga0501073_0022482
345 Ga0501073_0103548
346 Ga0501073_0150272
347 Ga0501074_0000603
348 Ga0501074_0006130
349 Ga0501074_0155422
350 Ga0501075_0289604
351 Ga0501079_0000775
352 Ga0501080_0000216
353 Ga0501080_0009291
354 Ga0501080_0099260
355 Ga0501044_0005120
356 Ga0501045_0133069
357 nmdc:mga0yw44_3522_c1
358 nmdc:mga07m45_479274_c1
359 nmdc:mga05p37_15233_c1
360 nmdc:mga05p37_79691_c1
361 nmdc:mga09592_42455_c1
362 nmdc:mga09592_57454_c1
363 nmdc:mga0qj67_91496_c1
364 nmdc:mga06r32_63163_c1
365 nmdc:mga08y16_448420_c1
366 Ga0495619_0017511
367 Ga0500643_000826
368 Ga0500630_070002
369 Ga0501084_0069759
370 Ga0501084_0789686
371 Ga0501082_0181452
372 2774901695
373 2501941891
374 2506868888
375 2566994940
376 2623585481
377 2738890892
378 2753075200
379 2795793901
380 2856859393
381 2858872129
382 2858902537
383 2866616466
384 2867306269
385 2870728489
386 2899373023
387 2902585765
388 2904535911
389 2922556053
390 2984593456
391 649812742
392 8057573693

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17778

BLACT_WH

Beta-lactamase associated winged helix domain

254

293

0.95

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

40

157

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ad9-assembly2.cif.gz_E crystal structure of human lactb2. 0.8936 9 252
4ad9-assembly2.cif.gz_F crystal structure of human lactb2. 0.891 9 252
4ad9-assembly1.cif.gz_B crystal structure of human lactb2. 0.8886 9 252
4ad9-assembly2.cif.gz_E crystal structure of human lactb2. 0.8503 9 252
4ad9-assembly2.cif.gz_F crystal structure of human lactb2. 0.8478 9 252
ID Description Score Start End Superfamily
af_I6XHY3_12_197_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9535 5 186 3.60.15.10
af_I6XHY3_12_197_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9283 5 186 3.60.15.10
af_Q95Q18_202_279_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9238 194 253 1.10.10.10
af_A0A0R0HZQ1_3_96_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9224 103 187 3.60.15.10
af_Q9VLS9_206_284_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8897 194 252 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A229R4N5-F1-model_v4 MBL fold metallo-hydrolase 0.9896 162 252 GO:0016787
GO:0046872
AF-A0A7I9WXV9-F1-model_v4 MBL fold metallo-hydrolase 0.9793 126 251 GO:0016787
GO:0046872
AF-A0A164IVE5-F1-model_v4 MBL fold metallo-hydrolase 0.9769 79 253 GO:0016787
GO:0046872
AF-A0A6G9CLL6-F1-model_v4 MBL fold metallo-hydrolase 0.9761 3 160 GO:0016787
GO:0046872
AF-A0A0K2RSC1-F1-model_v4 Beta-lactamase-like protein 2 0.976 7 157 GO:0016787
GO:0046872

Map