F302012

General Info

Members Datasets Scaffolds Average Seq Length
196 179 163 331

Family's Representative Sequence

Representative Sequence 3300046523|Ga0495644_0005734|Ga0495644_0005734_2645_3811
Length 376
Sequence LVDKAAQRLEHAGDSLARPRPVRAPETNQSLEKCMSAAPDDQSLAVPGARGSKVGAGERHDWRLAEVEALFDLPFMDLMFRAQQVHRAFHAPNRVQMSTLLSIKTGGCPEDCGYCPQSIHFETGVAREEMLPLEAVVDAARKAQAAGATRFCMGAAFRSPKKKDIERIAGMIREVGALGLETCATLGMLTPEQAQELKGAGLDYYNHNVDSSEDYYRKIISTRTYQHRLDTLEAVRNANLKVCSGGIVGMGETRTDRAGMLVTLANLPQHPQSVPINQLVQVKGTPLANADGFEFVRTIAVARILMPEAQVRLSAGREEMSDELQALAFMAGANSIFYGEKLLTTGNPDVERDRSLLARLKVNAETQQQTDARGCC

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
3 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
4 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
5 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
6 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
7 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
8 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
9 2643221607 Rhizobium sp. Root73 Isolate Unclassified
10 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
11 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
12 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
13 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
14 2744054655 Acinetobacter sp. BMW17 Isolate Unclassified
15 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
16 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
17 2773857925 Microvirga vignae BR3299 Isolate Unclassified
18 2823421272 Pseudomonas mendocina S5.2 Isolate Rhizoplane
19 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
20 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
21 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
22 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
23 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
24 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
25 2919506607 Acinetobacter sp. 3657 Isolate Unclassified
26 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
27 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
28 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
29 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
30 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
31 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
32 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
33 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
34 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
51 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
52 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
69 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
89 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
92 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
93 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
94 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
100 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
107 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
108 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
111 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
112 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
113 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
114 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
115 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
116 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
117 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
118 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
121 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
124 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
125 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
126 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
127 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
128 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
129 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
130 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
134 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
135 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
138 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
139 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
140 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
141 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
148 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
149 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
167 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
176 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
177 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
178 8033232454 Acinetobacter radioresistens SA188 Isolate Unclassified
179 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.16
Metatranscriptomes 0
Isolates 16.84

Biome Distribution

Category Percentage (%)
Aerial Root 0.51
Bulb 0
Endosphere 11.73
Nodule 1.02
Rhizoplane 4.59
Rhizosphere 70.41
Stem 0
Stem Tuber 0
Unclassified 11.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000064 3300003187 Bacteria 145243
2 JGI25151J46595_10005685 3300003187 Bacteria 6405
3 JGI25160J50197_1005560 3300003354 Bacteria 5228
4 Ga0058692_1000003 3300003856 Bacteria 435295
5 Ga0065703_1000213 3300005272 Bacteria 9262
6 Ga0070676_10190495 3300005328 Bacteria 1339
7 Ga0070675_100037736 3300005354 Bacteria 3937
8 Ga0070675_100077036 3300005354 Bacteria 2775
9 Ga0070674_100241684 3300005356 Bacteria 1414
10 Ga0070667_100352971 3300005367 Bacteria 1332
11 Ga0070681_10151508 3300005458 Bacteria 2245
12 Ga0068867_100253215 3300005459 Bacteria 1433
13 Ga0070665_100098788 3300005548 Bacteria 2924
14 Ga0068859_100000890 3300005617 Bacteria 30435
15 Ga0068859_100048987 3300005617 Bacteria 4244
16 Ga0068861_100000016 3300005719 Bacteria 79478
17 Ga0075365_10003161 3300006038 Bacteria 8405
18 Ga0075368_10052653 3300006042 Bacteria 1620
19 Ga0075363_100166593 3300006048 Bacteria 1249
20 Ga0075364_10000982 3300006051 Bacteria 15077
21 Ga0075364_10014773 3300006051 Bacteria 4829
22 Ga0075362_10039352 3300006177 Bacteria 2078
23 Ga0075370_10004101 3300006353 Bacteria 7018
24 Ga0068871_100058909 3300006358 Bacteria 3128
25 Ga0097620_100000890 3300006931 Bacteria 30435
26 Ga0097620_100048985 3300006931 Bacteria 4244
27 Ga0105251_10000019 3300009011 Bacteria 141884
28 Ga0105244_10048410 3300009036 Bacteria 2176
29 Ga0105250_10000188 3300009092 Bacteria 53425
30 Ga0105240_10110475 3300009093 Bacteria 3328
31 Ga0105245_10121390 3300009098 Bacteria 2442
32 Ga0105247_10000595 3300009101 Bacteria 29350
33 Ga0105247_10019553 3300009101 Bacteria 4067
34 Ga0105243_10000005 3300009148 Bacteria 576265
35 Ga0105248_10065768 3300009177 Bacteria 4071
36 Ga0105249_10003638 3300009553 Bacteria 13329
37 Ga0157373_10026638 3300013100 Bacteria 4173
38 Ga0157371_10001928 3300013102 Bacteria 20705
39 Ga0157378_10030730 3300013297 Bacteria 4743
40 Ga0157378_10146458 3300013297 Bacteria 2197
41 Ga0157375_10179470 3300013308 Bacteria 2268
42 Ga0163163_10218084 3300014325 Bacteria 1956
43 Ga0157380_10092665 3300014326 Bacteria 2497
44 Ga0157379_10025734 3300014968 Bacteria 5231
45 Ga0157376_10002897 3300014969 Bacteria 11763
46 Ga0163161_10112552 3300017792 Bacteria 2036
47 Ga0213872_10002180 3300021361 Bacteria 11736
48 Ga0209130_1000868 3300025284 Bacteria 24786
49 Ga0209025_1000182 3300025294 Bacteria 156443
50 Ga0209758_1003776 3300025297 Bacteria 13365
51 Ga0207426_1000102 3300025302 Bacteria 255303
52 Ga0207696_1000094 3300025711 Bacteria 184065
53 Ga0207655_1001537 3300025728 Bacteria 20860
54 Ga0207655_1009733 3300025728 Bacteria 5928
55 Ga0207713_1000010 3300025735 Bacteria 528374
56 Ga0207710_10001221 3300025900 Bacteria 13027
57 Ga0207659_10094023 3300025926 Bacteria 2245
58 Ga0207709_10000001 3300025935 Bacteria 2228154
59 Ga0207669_10086865 3300025937 Bacteria 2024
60 Ga0207711_10009809 3300025941 Bacteria 7964
61 Ga0207711_10037183 3300025941 Bacteria 4133
62 Ga0207689_10001586 3300025942 Bacteria 21539
63 Ga0207667_10111704 3300025949 Bacteria 2819
64 Ga0207712_10005339 3300025961 Bacteria 8114
65 Ga0207658_10345329 3300025986 Bacteria 1295
66 Ga0207648_10061962 3300026089 Bacteria 3261
67 Ga0207675_100000015 3300026118 Bacteria 126545
68 Ga0207675_100175749 3300026118 Bacteria 2049
69 Ga0209371_1000006 3300027312 Bacteria 1055642
70 Ga0265337_1000905 3300028556 Bacteria 15601
71 Ga0265334_10002100 3300028573 Bacteria 9411
72 Ga0307515_10033882 3300028794 Bacteria 8390
73 Ga0268256_1000007 3300030500 Bacteria 1055326
74 Ga0265332_10075993 3300031238 Bacteria 1428
75 Ga0265340_10035464 3300031247 Bacteria 2477
76 Ga0265331_10021328 3300031250 Bacteria 3317
77 Ga0265327_10000580 3300031251 Bacteria 61843
78 Ga0307408_100000065 3300031548 Bacteria 122365
79 Ga0307514_10151727 3300031649 Bacteria 1553
80 Ga0265314_10139159 3300031711 Bacteria 1503
81 Ga0316576_10008030 3300031727 Bacteria 6692
82 Ga0316576_10027081 3300031727 Bacteria 4027
83 Ga0316578_10116461 3300031728 Bacteria 1606
84 Ga0307409_100042505 3300031995 Bacteria 3405
85 Ga0316584_0040587 3300036712 Bacteria 3468
86 Ga0316584_0114528 3300036712 Bacteria 2017
87 Ga0395900_0333949 3300037418 Bacteria 1493
88 Ga0395898_0012574 3300037466 Bacteria 8754
89 Ga0395898_0099237 3300037466 Bacteria 2797
90 Ga0395905_0005529 3300037471 Bacteria 12895
91 Ga0400484_30562 3300038725 Bacteria 11555
92 Ga0400491_29507 3300038727 Bacteria 2737
93 Ga0400488_01794 3300038741 Bacteria 15266
94 Ga0436361_0046787 3300039447 Bacteria 28872
95 Ga0436361_0069324 3300039447 Bacteria 28910
96 Ga0439443_000784 3300042003 Bacteria 3146
97 Ga0450919_000070 3300042121 Bacteria 9578
98 Ga0439446_0000105 3300042156 Bacteria 14350
99 Ga0439435_0014671 3300042436 Bacteria 1939
100 Ga0439444_0000772 3300042437 Bacteria 3816
101 Ga0439464_0000451 3300042439 Bacteria 8199
102 Ga0439460_0000647 3300042461 Bacteria 7655
103 Ga0450918_000038 3300042531 Bacteria 26462
104 Ga0495603_0019116 3300046455 Bacteria 4147
105 Ga0495580_0031388 3300046472 Bacteria 3839
106 Ga0495585_0006200 3300046492 Bacteria 7451
107 Ga0495583_0029817 3300046506 Bacteria 2665
108 Ga0495610_0017567 3300046512 Bacteria 4075
109 Ga0495620_0029350 3300046515 Bacteria 2546
110 Ga0495631_0001421 3300046518 Bacteria 14544
111 Ga0495632_0011139 3300046519 Bacteria 5267
112 Ga0495644_0005734 3300046523 Bacteria 4848
113 Ga0495654_0079421 3300046530 Bacteria 1541
114 Ga0495640_0250942 3300046533 Bacteria 1108
115 Ga0495609_0020647 3300046538 Bacteria 3042
116 Ga0495621_0000993 3300046539 Bacteria 7265
117 Ga0495633_0064885 3300046558 Bacteria 1707
118 Ga0495634_0211782 3300046642 Bacteria 1199
119 Ga0495611_0044436 3300046648 Bacteria 1987
120 Ga0495625_0000621 3300046660 Bacteria 51568
121 Ga0495647_0006737 3300046681 Bacteria 3824
122 Ga0495658_0018067 3300046683 Bacteria 3659
123 Ga0495624_0054185 3300046690 Bacteria 2529
124 Ga0495660_0021376 3300046810 Bacteria 3706
125 Ga0495581_0083624 3300047315 Bacteria 1849
126 Ga0495615_0034069 3300048090 Bacteria 1237
127 Ga0495626_0076497 3300048091 Bacteria 1494
128 Ga0496108_0001485 3300048911 Bacteria 18526
129 Ga0496110_0003529 3300048913 Bacteria 12009
130 Ga0496111_0003573 3300048914 Bacteria 9635
131 Ga0496112_0018013 3300048915 Bacteria 6647
132 Ga0496113_0004878 3300048916 Bacteria 8308
133 Ga0495678_007036 3300049459 Bacteria 5895
134 Ga0501290_006997 3300049513 Bacteria 1412
135 Ga0501031_0119812 3300049568 Bacteria 1719
136 Ga0501033_0124274 3300049570 Bacteria 1871
137 Ga0501036_0011549 3300049572 Bacteria 7319
138 Ga0501038_0011594 3300049574 Bacteria 8041
139 Ga0501039_0005112 3300049575 Bacteria 9940
140 Ga0501040_0004760 3300049576 Bacteria 8800
141 Ga0501041_0006167 3300049577 Bacteria 7006
142 Ga0501048_0002534 3300049582 Bacteria 13979
143 Ga0501071_0013065 3300049587 Bacteria 5651
144 Ga0501072_0005266 3300049588 Bacteria 9851
145 Ga0501075_0146228 3300049591 Bacteria 1801
146 Ga0501076_0002158 3300049592 Bacteria 13485
147 Ga0501080_0040835 3300049742 Bacteria 4327
148 Ga0501081_0079312 3300049743 Bacteria 2296
149 Ga0501035_0003049 3300049822 Bacteria 16067
150 Ga0501044_0056238 3300049823 Bacteria 4039
151 nmdc:mga00v17_1994_c1 3300050491 Bacteria 10531
152 nmdc:mga00v17_33829_c1 3300050491 Bacteria 3032
153 nmdc:mga0yw44_2600_c1 3300050492 Bacteria 7755
154 nmdc:mga07m45_6513_c1 3300050496 Bacteria 5908
155 nmdc:mga0qj67_58793_c1 3300050509 Bacteria 3048
156 Ga0500610_0013892 3300053079 Bacteria 3762
157 Ga0495619_0278972 3300053085 Bacteria 1158
158 Ga0500594_0004649 3300053118 Bacteria 3029
159 Ga0500568_0004550 3300053139 Bacteria 7397
160 Ga0500568_0008171 3300053139 Bacteria 5072
161 Ga0500616_0004385 3300053153 Bacteria 10085
162 Ga0501082_0049165 3300060353 Bacteria 3636
163 Ga0530510_0018337 3300061734 Bacteria 4963

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036712 Ga0316584_0114528 Ga0316584_0114528_1185_2006 269
2 3300053085 Ga0495619_0278972 Ga0495619_0278972_20_904 294
3 3300042121 Ga0450919_000070 Ga0450919_000070_3203_4102 299
4 3300042531 Ga0450918_000038 Ga0450918_000038_6257_7156 299
5 3300031727 Ga0316576_10027081 Ga0316576_100270812 307
6 3300031728 Ga0316578_10116461 Ga0316578_101164612 307
7 3300036712 Ga0316584_0040587 Ga0316584_0040587_2006_2968 307
8 3300006353 Ga0075370_10004101 Ga0075370_100041013 311
9 3300050496 nmdc:mga07m45_6513_c1 nmdc:mga07m45_6513_c1_3058_4077 311
10 3300042003 Ga0439443_000784 Ga0439443_000784_482_1423 313
11 3300042436 Ga0439435_0014671 Ga0439435_0014671_663_1604 313
12 3300042437 Ga0439444_0000772 Ga0439444_0000772_711_1652 313
13 3300042461 Ga0439460_0000647 Ga0439460_0000647_6425_7366 313
14 3300037471 Ga0395905_0005529 Ga0395905_0005529_4915_5862 314
15 3300005354 Ga0070675_100077036 Ga0070675_1000770362 315
16 3300005459 Ga0068867_100253215 Ga0068867_1002532151 315
17 3300005548 Ga0070665_100098788 Ga0070665_1000987883 315
18 3300005617 Ga0068859_100048987 Ga0068859_1000489874 315
19 3300006358 Ga0068871_100058909 Ga0068871_1000589092 315
20 3300006931 Ga0097620_100048985 Ga0097620_1000489854 315
21 3300009101 Ga0105247_10019553 Ga0105247_100195535 315
22 3300009177 Ga0105248_10065768 Ga0105248_100657682 315
23 3300013297 Ga0157378_10030730 Ga0157378_100307304 315
24 3300013308 Ga0157375_10179470 Ga0157375_101794702 315
25 3300014968 Ga0157379_10025734 Ga0157379_100257343 315
26 3300014969 Ga0157376_10002897 Ga0157376_100028979 315
27 3300025926 Ga0207659_10094023 Ga0207659_100940233 315
28 3300025941 Ga0207711_10037183 Ga0207711_100371835 315
29 3300025942 Ga0207689_10001586 Ga0207689_1000158620 315
30 3300025949 Ga0207667_10111704 Ga0207667_101117043 315
31 3300026089 Ga0207648_10061962 Ga0207648_100619624 315
32 3300028556 Ga0265337_1000905 Ga0265337_100090517 316
33 3300028573 Ga0265334_10002100 Ga0265334_100021009 316
34 3300031250 Ga0265331_10021328 Ga0265331_100213284 316
35 3300031711 Ga0265314_10139159 Ga0265314_101391592 316
36 iso_pu_bacteria 2551306352 2552749095 316
37 iso_pu_bacteria 2639762793 2640734041 316
38 iso_pu_bacteria 2643221665 2644362299 316
39 iso_pu_bacteria 2675903507 2678231017 316
40 iso_pu_bacteria 2744054655 2745160110 316
41 iso_pu_bacteria 2744054655 2745160689 316
42 iso_pu_bacteria 2773857761 2774388434 316
43 iso_pu_bacteria 2773857770 2774437636 316
44 iso_pu_bacteria 2916699645 2916702214 316
45 iso_pu_bacteria 2919182534 2919183928 316
46 iso_pu_bacteria 2919506607 2919506982 316
47 iso_pu_bacteria 2928515477 2928517817 316
48 iso_pu_bacteria 2984568884 2984569883 316
49 3300014326 Ga0157380_10092665 Ga0157380_100926652 317
50 3300046530 Ga0495654_0079421 Ga0495654_0079421_14_1021 317
51 3300050509 nmdc:mga0qj67_58793_c1 nmdc:mga0qj67_58793_c1_563_1540 318
52 3300025937 Ga0207669_10086865 Ga0207669_100868652 319
53 3300026118 Ga0207675_100175749 Ga0207675_1001757492 319
54 3300046472 Ga0495580_0031388 Ga0495580_0031388_2154_3116 319
55 3300046533 Ga0495640_0250942 Ga0495640_0250942_33_995 319
56 3300046642 Ga0495634_0211782 Ga0495634_0211782_156_1118 319
57 3300046690 Ga0495624_0054185 Ga0495624_0054185_1236_2198 319
58 3300047315 Ga0495581_0083624 Ga0495581_0083624_398_1360 319
59 3300003856 Ga0058692_1000003 Ga0058692_100000359 320
60 3300005272 Ga0065703_1000213 Ga0065703_10002133 320
61 3300009553 Ga0105249_10003638 Ga0105249_100036383 320
62 3300013100 Ga0157373_10026638 Ga0157373_100266385 320
63 3300013102 Ga0157371_10001928 Ga0157371_100019288 320
64 3300017792 Ga0163161_10112552 Ga0163161_101125522 320
65 3300025728 Ga0207655_1001537 Ga0207655_100153712 320
66 3300025728 Ga0207655_1009733 Ga0207655_10097333 320
67 3300025935 Ga0207709_10000001 Ga0207709_100000011291 320
68 3300025961 Ga0207712_10005339 Ga0207712_100053396 320
69 3300027312 Ga0209371_1000006 Ga0209371_1000006445 320
70 3300030500 Ga0268256_1000007 Ga0268256_1000007445 320
71 iso_pu_bacteria 8033232454 8033234609 320
72 3300005617 Ga0068859_100000890 Ga0068859_10000089021 321
73 3300006038 Ga0075365_10003161 Ga0075365_100031613 321
74 3300006042 Ga0075368_10052653 Ga0075368_100526532 321
75 3300006048 Ga0075363_100166593 Ga0075363_1001665932 321
76 3300006051 Ga0075364_10000982 Ga0075364_100009826 321
77 3300006051 Ga0075364_10014773 Ga0075364_100147734 321
78 3300006177 Ga0075362_10039352 Ga0075362_100393522 321
79 3300006931 Ga0097620_100000890 Ga0097620_10000089021 321
80 3300025941 Ga0207711_10009809 Ga0207711_100098094 321
81 3300038725 Ga0400484_30562 Ga0400484_30562_560_1573 321
82 3300038727 Ga0400491_29507 Ga0400491_29507_1145_2158 321
83 3300038741 Ga0400488_01794 Ga0400488_01794_11323_12336 321
84 3300049570 Ga0501033_0124274 Ga0501033_0124274_328_1335 321
85 3300050491 nmdc:mga00v17_1994_c1 nmdc:mga00v17_1994_c1_9265_10248 321
86 3300050491 nmdc:mga00v17_33829_c1 nmdc:mga00v17_33829_c1_832_1815 321
87 3300050492 nmdc:mga0yw44_2600_c1 nmdc:mga0yw44_2600_c1_3665_4648 321
88 3300009036 Ga0105244_10048410 Ga0105244_100484104 322
89 3300009101 Ga0105247_10000595 Ga0105247_1000059520 322
90 3300009148 Ga0105243_10000005 Ga0105243_10000005136 322
91 3300025900 Ga0207710_10001221 Ga0207710_100012214 322
92 3300049513 Ga0501290_006997 Ga0501290_006997_331_1380 322
93 iso_pu_bacteria 2508501050 2508729691 322
94 iso_pu_bacteria 2508501114 2509074014 322
95 iso_pu_bacteria 2554235132 2554812875 322
96 iso_pu_bacteria 2600254954 2600445915 322
97 iso_pu_bacteria 2600255389 2602011285 322
98 iso_pu_bacteria 2773857925 2774871272 322
99 iso_pu_bacteria 2823421272 2823421823 322
100 iso_pu_bacteria 2882456835 2882463144 322
101 iso_pu_bacteria 2917699015 2917701952 322
102 iso_pu_bacteria 2919501602 2919506417 322
103 iso_pu_bacteria 2926063275 2926068117 322
104 iso_pu_bacteria 8034962539 8034966380 322
105 3300005354 Ga0070675_100037736 Ga0070675_1000377362 323
106 3300009011 Ga0105251_10000019 Ga0105251_1000001946 323
107 3300025711 Ga0207696_1000094 Ga0207696_100009488 323
108 3300025735 Ga0207713_1000010 Ga0207713_100001094 323
109 3300039447 Ga0436361_0046787 Ga0436361_0046787_18608_19600 323
110 3300039447 Ga0436361_0069324 Ga0436361_0069324_12435_13439 323
111 3300005356 Ga0070674_100241684 Ga0070674_1002416841 324
112 3300009098 Ga0105245_10121390 Ga0105245_101213902 324
113 3300021361 Ga0213872_10002180 Ga0213872_1000218010 324
114 3300025986 Ga0207658_10345329 Ga0207658_103453291 324
115 3300031238 Ga0265332_10075993 Ga0265332_100759932 324
116 3300031649 Ga0307514_10151727 Ga0307514_101517272 325
117 iso_pu_bacteria 2582581306 2585265253 325
118 iso_pu_bacteria 2643221607 2644047278 325
119 iso_pu_bacteria 2643221636 2644199649 325
120 iso_pu_bacteria 2643221686 2644480067 325
121 3300005328 Ga0070676_10190495 Ga0070676_101904951 326
122 3300005367 Ga0070667_100352971 Ga0070667_1003529711 326
123 3300005458 Ga0070681_10151508 Ga0070681_101515083 326
124 3300009092 Ga0105250_10000188 Ga0105250_100001888 326
125 3300009093 Ga0105240_10110475 Ga0105240_101104752 326
126 3300013297 Ga0157378_10146458 Ga0157378_101464581 326
127 3300014325 Ga0163163_10218084 Ga0163163_102180841 326
128 3300031548 Ga0307408_100000065 Ga0307408_100000065100 326
129 3300031727 Ga0316576_10008030 Ga0316576_100080302 326
130 3300037418 Ga0395900_0333949 Ga0395900_0333949_475_1458 326
131 3300037466 Ga0395898_0012574 Ga0395898_0012574_4745_5794 326
132 3300037466 Ga0395898_0099237 Ga0395898_0099237_797_1780 326
133 3300042439 Ga0439464_0000451 Ga0439464_0000451_6404_7462 326
134 3300048911 Ga0496108_0001485 Ga0496108_0001485_14432_15412 326
135 3300048913 Ga0496110_0003529 Ga0496110_0003529_10988_11968 326
136 3300048914 Ga0496111_0003573 Ga0496111_0003573_5667_6647 326
137 3300048915 Ga0496112_0018013 Ga0496112_0018013_5238_6218 326
138 3300048916 Ga0496113_0004878 Ga0496113_0004878_4433_5413 326
139 3300003187 JGI25151J46595_10005685 JGI25151J46595_100056852 328
140 3300046492 Ga0495585_0006200 Ga0495585_0006200_6183_7187 328
141 3300046506 Ga0495583_0029817 Ga0495583_0029817_256_1260 328
142 3300046515 Ga0495620_0029350 Ga0495620_0029350_978_1982 328
143 3300046518 Ga0495631_0001421 Ga0495631_0001421_10597_11601 328
144 3300046519 Ga0495632_0011139 Ga0495632_0011139_4181_5185 328
145 3300046523 Ga0495644_0005734 Ga0495644_0005734_2645_3811 328
146 3300046538 Ga0495609_0020647 Ga0495609_0020647_1902_2906 328
147 3300046539 Ga0495621_0000993 Ga0495621_0000993_1678_2844 328
148 3300046558 Ga0495633_0064885 Ga0495633_0064885_42_1208 328
149 3300046648 Ga0495611_0044436 Ga0495611_0044436_418_1422 328
150 3300046660 Ga0495625_0000621 Ga0495625_0000621_2620_3624 328
151 3300046810 Ga0495660_0021376 Ga0495660_0021376_1708_2712 328
152 3300048090 Ga0495615_0034069 Ga0495615_0034069_68_1132 328
153 3300048091 Ga0495626_0076497 Ga0495626_0076497_307_1311 328
154 3300049459 Ga0495678_007036 Ga0495678_007036_512_1516 328
155 3300049568 Ga0501031_0119812 Ga0501031_0119812_452_1447 328
156 3300049572 Ga0501036_0011549 Ga0501036_0011549_6009_7004 328
157 3300049574 Ga0501038_0011594 Ga0501038_0011594_633_1628 328
158 3300049575 Ga0501039_0005112 Ga0501039_0005112_8594_9589 328
159 3300049576 Ga0501040_0004760 Ga0501040_0004760_1386_2381 328
160 3300049577 Ga0501041_0006167 Ga0501041_0006167_3499_4494 328
161 3300049582 Ga0501048_0002534 Ga0501048_0002534_11032_12027 328
162 3300049587 Ga0501071_0013065 Ga0501071_0013065_3167_4162 328
163 3300049588 Ga0501072_0005266 Ga0501072_0005266_1875_2870 328
164 3300049591 Ga0501075_0146228 Ga0501075_0146228_187_1182 328
165 3300049592 Ga0501076_0002158 Ga0501076_0002158_735_1730 328
166 3300049742 Ga0501080_0040835 Ga0501080_0040835_2991_3986 328
167 3300049743 Ga0501081_0079312 Ga0501081_0079312_406_1401 328
168 3300049822 Ga0501035_0003049 Ga0501035_0003049_2864_3859 328
169 3300049823 Ga0501044_0056238 Ga0501044_0056238_2480_3475 328
170 3300053079 Ga0500610_0013892 Ga0500610_0013892_263_1267 328
171 3300053118 Ga0500594_0004649 Ga0500594_0004649_1822_2826 328
172 3300053139 Ga0500568_0004550 Ga0500568_0004550_313_1317 328
173 3300053153 Ga0500616_0004385 Ga0500616_0004385_8666_9670 328
174 3300060353 Ga0501082_0049165 Ga0501082_0049165_88_1083 328
175 3300061734 Ga0530510_0018337 Ga0530510_0018337_97_1092 328
176 iso_pu_bacteria 2844533157 2844537929 328
177 3300028794 Ga0307515_10033882 Ga0307515_1003388210 329
178 3300031247 Ga0265340_10035464 Ga0265340_100354642 329
179 3300046512 Ga0495610_0017567 Ga0495610_0017567_662_1657 330
180 3300053139 Ga0500568_0008171 Ga0500568_0008171_2185_3177 330
181 3300005719 Ga0068861_100000016 Ga0068861_10000001649 331
182 3300026118 Ga0207675_100000015 Ga0207675_10000001561 331
183 3300031251 Ga0265327_10000580 Ga0265327_1000058039 331
184 3300031995 Ga0307409_100042505 Ga0307409_1000425052 331
185 3300042156 Ga0439446_0000105 Ga0439446_0000105_6032_7180 331
186 3300046455 Ga0495603_0019116 Ga0495603_0019116_2410_3477 331
187 3300046681 Ga0495647_0006737 Ga0495647_0006737_1785_2852 331
188 3300046683 Ga0495658_0018067 Ga0495658_0018067_484_1551 331
189 iso_pu_bacteria 637000220 637323028 331
190 3300003187 JGI25151J46595_10000064 JGI25151J46595_1000006425 332
191 3300003354 JGI25160J50197_1005560 JGI25160J50197_10055604 332
192 3300025284 Ga0209130_1000868 Ga0209130_10008688 332
193 3300025294 Ga0209025_1000182 Ga0209025_1000182161 332
194 3300025297 Ga0209758_1003776 Ga0209758_100377612 332
195 3300025302 Ga0207426_1000102 Ga0207426_100010295 332
196 iso_pu_bacteria 8018150411 8018151527 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06968

BATS

Biotin and Thiamin Synthesis associated domain

275

363

0.98

PF04055

Radical_SAM

Radical SAM superfamily

102

264

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1r30-assembly1.cif.gz_A the crystal structure of biotin synthase, an s-adenosylmethionine-dependent radical enzyme 0.9868 15 323
1r30-assembly1.cif.gz_A the crystal structure of biotin synthase, an s-adenosylmethionine-dependent radical enzyme 0.9712 15 323
5ff4-assembly1.cif.gz_A hyde from t. maritima in complex with (2r,4r)-tmetda 0.8688 19 328
7o26-assembly1.cif.gz_A complex-b bound [fefe]-hydrogenase maturase hyde fromt. maritima (5'da + methionine) 0.8685 19 328
7o1o-assembly1.cif.gz_A complex-b bound [fefe]-hydrogenase maturase hyde fromt. maritima (auxiliary cluster deleted variant) 0.8674 19 328
ID Description Score Start End Superfamily
af_O59778_20_335_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9872 15 325 3.20.20.70
af_O59778_20_335_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9687 15 325 3.20.20.70
af_Q2FVJ7_11_319_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9407 17 324 3.20.20.70
af_A0A1D6M1W1_19_103_3.40.50.10800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NadA-like 0.9397 248 316 3.40.50.10800
af_P9WPQ7_39_344_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9296 21 325 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A379WY99-F1-model_v4 Biotin synthetase (EC 2.8.1.6) 1 124 223 GO:0004076
GO:0009102
GO:0046872
GO:0051537
GO:0051539
AF-A0A4Q0Q4A2-F1-model_v4 Biotin synthase 0.9958 196 323 GO:0004076
GO:0009102
GO:0051537
GO:0051539
AF-A0A527GJE9-F1-model_v4 Biotin synthase 0.9955 63 163 GO:0004076
GO:0009102
GO:0046872
GO:0051537
GO:0051539
AF-A0A522ACY0-F1-model_v4 Biotin synthase (EC 2.8.1.6) 0.9946 15 327 GO:0004076
GO:0005506
GO:0009102
GO:0051537
GO:0051539
AF-A0A4R6V039-F1-model_v4 Biotin synthase (EC 2.8.1.6) 0.9946 13 325 GO:0004076
GO:0005506
GO:0009102
GO:0051537
GO:0051539

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pLDDT pTM Quality
92.67 0.91 High
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Predicted Structure (AlphaFold2)

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