F301871

General Info

Members Datasets Scaffolds Average Seq Length
196 125 380 534

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0490828|Ga0436361_0490828_495_2309
Length 604
Sequence VQLTRQLPDIDASGIDRIILVILFLRNRAGNRIDFSSAQNENSTQAQSGAHASDGAVTKAWGNTMKKVLLAGVSLLAVSMVDRAYADTLPPMGKTFCDPYKNYSCLDSYLGDDFITRFINYYRLEWGHEAAPSDPKAPPGRRDYWPGTPQSTPPMPFTEWPYGAATPLGVTRPSSIDSPLMNALSNTTLGQSMNDNHIQVYGWINAGGNLSNNTVRGGNWPAAYLYNPNTVSLDQAVLYIERLPDTVQKDHIDWGFRIAPIYGENYRYTTAYGLWSSQLLQHNSNNGYDMPMAYGEVFIPQVMEGWLIRFGRYISIPDVEAQLAPNNYMYTHSMTYTFDNYTNTGVMSTLALTKNVFWQLGVSVGTEAMPWHYRAQIANPFPNPLYPGNTMPKDPGAVPSLATAVRLTSDSGNDTLYLTADGINGGQWGYNNLQWYGGTFYHKFNDQWHISVEAYDLHQNNVLNANNPAALAAFAAGGTPFSPQYMPFNAPFFAQCSSTAVFSCKAEVRTGLFYLNYKATPLDNISYRFEFYDDMQGQRTGTKTRYVETGIGWQHWFSPQIEIRPEFSFYRSLDAPAFNGNANLGIAPNKNTALIGSADIIIHF

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
38 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
40 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
63 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
64 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
65 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
66 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
67 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
68 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
69 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
70 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
71 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
72 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
73 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
74 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
75 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
76 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
77 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
78 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
79 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
80 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
83 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
88 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
89 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
90 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
91 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
92 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
93 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
94 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
95 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
96 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
97 2906610324
98 2922425934
99 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
100 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
101 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
102 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
103 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
104 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
105 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
106 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
107 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
108 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
109 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
110 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
111 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
112 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
113 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
114 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
115 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
116 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
117 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
118 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
119 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
120 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
121 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
122 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
123 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
124 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
125 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.99
Metatranscriptomes 0
Isolates 17.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.06
Nodule 15.82
Rhizoplane 7.14
Rhizosphere 60.71
Stem 0
Stem Tuber 0
Unclassified 2.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_0490828 3300039447 Bacteria 3593
2 Ga0070683_100095941 3300005329 Bacteria 2789
3 Ga0070709_10017116 3300005434 Bacteria 4150
4 Ga0070709_10050992 3300005434 Bacteria 2595
5 Ga0070714_100013410 3300005435 Bacteria 6568
6 Ga0070714_100048123 3300005435 Bacteria 3625
7 Ga0070713_100014385 3300005436 Bacteria 5876
8 Ga0070711_100039541 3300005439 Bacteria 3178
9 Ga0070706_100028193 3300005467 Bacteria 5168
10 Ga0070684_100022401 3300005535 Bacteria 5269
11 Ga0070665_100052569 3300005548 Bacteria 4085
12 Ga0070665_100068128 3300005548 Bacteria 3568
13 Ga0068855_100027364 3300005563 Bacteria 6821
14 Ga0068854_100076994 3300005578 Bacteria 2453
15 Ga0068852_100007059 3300005616 Bacteria 8180
16 Ga0068859_100057131 3300005617 Bacteria 3931
17 Ga0068863_100035083 3300005841 Bacteria 4778
18 Ga0070717_10020591 3300006028 Bacteria 5190
19 Ga0070717_10064848 3300006028 Bacteria 3035
20 Ga0070715_10004627 3300006163 Bacteria 4536
21 Ga0070715_10027023 3300006163 Bacteria 2289
22 Ga0070716_100003176 3300006173 Bacteria 7698
23 Ga0070716_100075716 3300006173 Bacteria 1992
24 Ga0070712_100006179 3300006175 Bacteria 7411
25 Ga0070712_100010984 3300006175 Bacteria 5730
26 Ga0097621_100075064 3300006237 Bacteria 2801
27 Ga0075434_100027265 3300006871 Bacteria 5606
28 Ga0097620_100057129 3300006931 Bacteria 3931
29 Ga0075435_100011316 3300007076 Bacteria 6558
30 Ga0099795_10017662 3300007788 Bacteria 2278
31 Ga0105240_10002042 3300009093 Bacteria 33226
32 Ga0105240_10048300 3300009093 Bacteria 5380
33 Ga0105245_10014269 3300009098 Bacteria 6923
34 Ga0105241_10005097 3300009174 Bacteria 9691
35 Ga0105241_10029250 3300009174 Bacteria 4109
36 Ga0105248_10000003 3300009177 Bacteria 1019601
37 Ga0105237_10003048 3300009545 Bacteria 20206
38 Ga0105238_10027721 3300009551 Bacteria 5774
39 Ga0105239_10002471 3300010375 Bacteria 23555
40 Ga0105239_10003189 3300010375 Bacteria 20299
41 Ga0105239_10028825 3300010375 Bacteria 6104
42 Ga0105239_10063361 3300010375 Bacteria 4059
43 Ga0157369_10141871 3300013105 Bacteria 2542
44 Ga0157378_10065204 3300013297 Bacteria 3260
45 Ga0163162_10000007 3300013306 Bacteria 368084
46 Ga0213872_10000077 3300021361 Bacteria 90250
47 Ga0213872_10000205 3300021361 Bacteria 52617
48 Ga0213872_10000273 3300021361 Bacteria 43983
49 Ga0213872_10000399 3300021361 Bacteria 36152
50 Ga0213872_10003895 3300021361 Bacteria 8103
51 Ga0213872_10015614 3300021361 Bacteria 3530
52 Ga0213872_10025842 3300021361 Bacteria 2698
53 Ga0213876_10015417 3300021384 Unclassified 4045
54 Ga0213876_10026731 3300021384 Unclassified 3044
55 Ga0213875_10000169 3300021388 Bacteria 68414
56 Ga0213875_10002607 3300021388 Bacteria 10706
57 Ga0209437_103129 3300025233 Bacteria 3045
58 Ga0209148_1000503 3300025254 Bacteria 39782
59 Ga0209233_1000732 3300025261 Bacteria 15063
60 Ga0209233_1008580 3300025261 Bacteria 3150
61 Ga0209455_1007740 3300025272 Bacteria 2995
62 Ga0207685_10002778 3300025905 Bacteria 4095
63 Ga0207685_10013107 3300025905 Bacteria 2555
64 Ga0207699_10000511 3300025906 Bacteria 19262
65 Ga0207699_10014870 3300025906 Bacteria 4029
66 Ga0207699_10037281 3300025906 Bacteria 2778
67 Ga0207654_10040830 3300025911 Bacteria 2616
68 Ga0207654_10070029 3300025911 Bacteria 2081
69 Ga0207695_10000015 3300025913 Bacteria 803205
70 Ga0207695_10062161 3300025913 Bacteria 3857
71 Ga0207695_10105127 3300025913 Bacteria 2811
72 Ga0207671_10005173 3300025914 Bacteria 12125
73 Ga0207693_10010609 3300025915 Bacteria 7473
74 Ga0207693_10042856 3300025915 Bacteria 3562
75 Ga0207663_10001609 3300025916 Bacteria 10622
76 Ga0207663_10002775 3300025916 Bacteria 8445
77 Ga0207694_10013190 3300025924 Bacteria 6222
78 Ga0207694_10061234 3300025924 Bacteria 2929
79 Ga0207694_10147475 3300025924 Bacteria 1894
80 Ga0207700_10010312 3300025928 Bacteria 5887
81 Ga0207665_10012511 3300025939 Bacteria 5573
82 Ga0207665_10032785 3300025939 Bacteria 3440
83 Ga0207711_10000012 3300025941 Bacteria 515147
84 Ga0207640_10114697 3300025981 Bacteria 1918
85 Ga0268266_10004223 3300028379 Bacteria 13829
86 Ga0268266_10046523 3300028379 Bacteria 3714
87 Ga0268266_10119115 3300028379 Bacteria 2348
88 Ga0265332_10004361 3300031238 Bacteria 6658
89 Ga0265332_10025423 3300031238 Bacteria 2600
90 Ga0265340_10034696 3300031247 Bacteria 2508
91 Ga0265339_10006184 3300031249 Bacteria 7884
92 Ga0265342_10004296 3300031712 Bacteria 11284
93 Ga0265342_10004966 3300031712 Bacteria 10274
94 Ga0265342_10019502 3300031712 Bacteria 4368
95 Ga0307516_10000343 3300031730 Bacteria 60659
96 Ga0373927_0012349 3300035695 Bacteria 5684
97 Ga0436364_0042928 3300037853 Bacteria 71182
98 Ga0436364_0723025 3300037853 Bacteria 35657
99 Ga0436365_0885899 3300039437 Bacteria 5575
100 Ga0436365_1454579 3300039437 Bacteria 2566
101 Ga0436361_0035786 3300039447 Bacteria 7977
102 Ga0436361_0104919 3300039447 Bacteria 3403
103 Ga0436361_0239068 3300039447 Bacteria 4206
104 Ga0436361_0417909 3300039447 Bacteria 2598
105 Ga0436361_0623219 3300039447 Bacteria 47496
106 Ga0436361_0711176 3300039447 Bacteria 18026
107 Ga0436361_0784147 3300039447 Bacteria 11641
108 Ga0436361_0941839 3300039447 Bacteria 174965
109 Ga0436361_0979508 3300039447 Bacteria 15399
110 Ga0436361_0987379 3300039447 Bacteria 21411
111 Ga0436361_1007413 3300039447 Bacteria 98457
112 Ga0436361_1162585 3300039447 Bacteria 11018
113 Ga0436363_1135372 3300039450 Bacteria 2479
114 Ga0466969_0023915 3300044656 Bacteria 3144
115 Ga0466969_0024360 3300044656 Bacteria 3113
116 Ga0495606_0016452 3300046507 Bacteria 5636
117 Ga0495648_0004139 3300046524 Bacteria 12474
118 Ga0495648_0031772 3300046524 Bacteria 3473
119 Ga0495625_0000917 3300046660 Bacteria 39628
120 Ga0495649_0000120 3300046694 Bacteria 68590
121 Ga0495683_0058764 3300047323 Bacteria 1909
122 Ga0495686_0004064 3300047472 Bacteria 12221
123 Ga0495686_0010800 3300047472 Bacteria 6475
124 Ga0495602_0076699 3300048088 Unclassified 2831
125 Ga0496100_0025576 3300048903 Bacteria 3612
126 Ga0496101_0136126 3300048904 Bacteria 1869
127 Ga0496102_0152719 3300048905 Bacteria 2170
128 Ga0496105_0117677 3300048908 Bacteria 2192
129 Ga0496107_0027209 3300048910 Bacteria 4060
130 Ga0496108_0025177 3300048911 Bacteria 4903
131 Ga0496109_0002783 3300048912 Bacteria 14656
132 Ga0496110_0006990 3300048913 Bacteria 8977
133 Ga0496110_0039348 3300048913 Bacteria 4117
134 Ga0496112_0002618 3300048915 Bacteria 14532
135 Ga0496113_0173761 3300048916 Bacteria 1707
136 Ga0496114_0084671 3300048917 Bacteria 2685
137 Ga0496115_0041300 3300048918 Bacteria 3670
138 Ga0496115_0060339 3300048918 Bacteria 3056
139 Ga0496121_0000021 3300048924 Bacteria 478544
140 Ga0496121_0012430 3300048924 Bacteria 9284
141 Ga0496126_0000033 3300048929 Bacteria 368851
142 Ga0496126_0000231 3300048929 Bacteria 120254
143 Ga0496126_0001175 3300048929 Bacteria 43079
144 Ga0496126_0010867 3300048929 Bacteria 9487
145 Ga0496126_0020767 3300048929 Bacteria 6429
146 Ga0496126_0029472 3300048929 Bacteria 5214
147 Ga0496126_0060050 3300048929 Bacteria 3422
148 Ga0496126_0063714 3300048929 Bacteria 3304
149 Ga0495682_0010958 3300049460 Bacteria 3495
150 Ga0501047_0040102 3300049581 Bacteria 4529
151 nmdc:mga0n895_213863_c1 3300050512 Bacteria 1958
152 nmdc:mga0n895_22886_c1 3300050512 Bacteria 5862
153 nmdc:mga0rr50_26267_c1 3300050513 Bacteria 4060
154 Ga0495601_0037836 3300053077 Unclassified 3016
155 Ga0500644_0003716 3300053088 Bacteria 3790
156 2509152480 2508501128 Bacteria 8613869
157 2513890815 2513237141 Bacteria 8496279
158 2524538085 2524023228 Bacteria 10118060
159 2824665597 2824661429 Bacteria 9877870
160 2879107446 2879099564 Bacteria 10442239
161 2903754298 2903748898 Bacteria 9972761
162 2906611892
163 2922427406
164 2932812909 2932809354 Bacteria 9135765
165 2932819000 2932818245 Bacteria 9955613
166 2935641733 2935638405 Bacteria 10015038
167 2935675303 2935675223 Bacteria 9928132
168 2935685690 2935684952 Bacteria 9590419
169 2935711604 2935703347 Bacteria 10242284
170 2935714242 2935713505 Bacteria 9608509
171 2935724861 2935722832 Bacteria 9608746
172 2935732780 2935732158 Bacteria 9706831
173 2935742159 2935741537 Bacteria 9707219
174 2935751655 2935750917 Bacteria 9590372
175 2935768158 2935760218 Bacteria 9817913
176 2935805573 2935801545 Bacteria 9301974
177 2935818579 2935810662 Bacteria 9401221
178 2935829899 2935827899 Bacteria 10038562
179 2935845674 2935837841 Bacteria 9454360
180 2936002085 2936002035 Bacteria 9362176
181 2936045212 2936037263 Bacteria 9446081
182 2940557542 2940556831 Bacteria 9590747
183 2941545846 2941538514 Bacteria 9402094
184 8006940964 8006933436 Bacteria 10410654
185 8006980839 8006973647 Bacteria 10679141
186 8016521495 8016511872 Bacteria 9921665
187 8017064136 8017057580 Bacteria 10023680
188 8019583464 8019576017 Bacteria 10049540
189 8019591277 8019586578 Bacteria 10212056
190 8019600067 8019597564 Bacteria 10041141
191 Ga0436361_0490828
192 Ga0070683_100095941
193 Ga0070709_10017116
194 Ga0070709_10050992
195 Ga0070714_100013410
196 Ga0070714_100048123
197 Ga0070713_100014385
198 Ga0070711_100039541
199 Ga0070706_100028193
200 Ga0070684_100022401
201 Ga0070665_100052569
202 Ga0070665_100068128
203 Ga0068855_100027364
204 Ga0068854_100076994
205 Ga0068852_100007059
206 Ga0068859_100057131
207 Ga0068863_100035083
208 Ga0070717_10020591
209 Ga0070717_10064848
210 Ga0070715_10004627
211 Ga0070715_10027023
212 Ga0070716_100003176
213 Ga0070716_100075716
214 Ga0070712_100006179
215 Ga0070712_100010984
216 Ga0097621_100075064
217 Ga0075434_100027265
218 Ga0097620_100057129
219 Ga0075435_100011316
220 Ga0099795_10017662
221 Ga0105240_10002042
222 Ga0105240_10048300
223 Ga0105245_10014269
224 Ga0105241_10005097
225 Ga0105241_10029250
226 Ga0105248_10000003
227 Ga0105237_10003048
228 Ga0105238_10027721
229 Ga0105239_10002471
230 Ga0105239_10003189
231 Ga0105239_10028825
232 Ga0105239_10063361
233 Ga0157369_10141871
234 Ga0157378_10065204
235 Ga0163162_10000007
236 Ga0213872_10000077
237 Ga0213872_10000205
238 Ga0213872_10000273
239 Ga0213872_10000399
240 Ga0213872_10003895
241 Ga0213872_10015614
242 Ga0213872_10025842
243 Ga0213876_10015417
244 Ga0213876_10026731
245 Ga0213875_10000169
246 Ga0213875_10002607
247 Ga0209437_103129
248 Ga0209148_1000503
249 Ga0209233_1000732
250 Ga0209233_1008580
251 Ga0209455_1007740
252 Ga0207685_10002778
253 Ga0207685_10013107
254 Ga0207699_10000511
255 Ga0207699_10014870
256 Ga0207699_10037281
257 Ga0207654_10040830
258 Ga0207654_10070029
259 Ga0207695_10000015
260 Ga0207695_10062161
261 Ga0207695_10105127
262 Ga0207671_10005173
263 Ga0207693_10010609
264 Ga0207693_10042856
265 Ga0207663_10001609
266 Ga0207663_10002775
267 Ga0207694_10013190
268 Ga0207694_10061234
269 Ga0207694_10147475
270 Ga0207700_10010312
271 Ga0207665_10012511
272 Ga0207665_10032785
273 Ga0207711_10000012
274 Ga0207640_10114697
275 Ga0268266_10004223
276 Ga0268266_10046523
277 Ga0268266_10119115
278 Ga0265332_10004361
279 Ga0265332_10025423
280 Ga0265340_10034696
281 Ga0265339_10006184
282 Ga0265342_10004296
283 Ga0265342_10004966
284 Ga0265342_10019502
285 Ga0307516_10000343
286 Ga0373927_0012349
287 Ga0436364_0042928
288 Ga0436364_0723025
289 Ga0436365_0885899
290 Ga0436365_1454579
291 Ga0436361_0035786
292 Ga0436361_0104919
293 Ga0436361_0239068
294 Ga0436361_0417909
295 Ga0436361_0623219
296 Ga0436361_0711176
297 Ga0436361_0784147
298 Ga0436361_0941839
299 Ga0436361_0979508
300 Ga0436361_0987379
301 Ga0436361_1007413
302 Ga0436361_1162585
303 Ga0436363_1135372
304 Ga0466969_0023915
305 Ga0466969_0024360
306 Ga0495606_0016452
307 Ga0495648_0004139
308 Ga0495648_0031772
309 Ga0495625_0000917
310 Ga0495649_0000120
311 Ga0495683_0058764
312 Ga0495686_0004064
313 Ga0495686_0010800
314 Ga0495602_0076699
315 Ga0496100_0025576
316 Ga0496101_0136126
317 Ga0496102_0152719
318 Ga0496105_0117677
319 Ga0496107_0027209
320 Ga0496108_0025177
321 Ga0496109_0002783
322 Ga0496110_0006990
323 Ga0496110_0039348
324 Ga0496112_0002618
325 Ga0496113_0173761
326 Ga0496114_0084671
327 Ga0496115_0041300
328 Ga0496115_0060339
329 Ga0496121_0000021
330 Ga0496121_0012430
331 Ga0496126_0000033
332 Ga0496126_0000231
333 Ga0496126_0001175
334 Ga0496126_0010867
335 Ga0496126_0020767
336 Ga0496126_0029472
337 Ga0496126_0060050
338 Ga0496126_0063714
339 Ga0495682_0010958
340 Ga0501047_0040102
341 nmdc:mga0n895_213863_c1
342 nmdc:mga0n895_22886_c1
343 nmdc:mga0rr50_26267_c1
344 Ga0495601_0037836
345 Ga0500644_0003716
346 2509152480
347 2513890815
348 2524538085
349 2824665597
350 2879107446
351 2903754298
352 2906611892
353 2922427406
354 2932812909
355 2932819000
356 2935641733
357 2935675303
358 2935685690
359 2935711604
360 2935714242
361 2935724861
362 2935732780
363 2935742159
364 2935751655
365 2935768158
366 2935805573
367 2935818579
368 2935829899
369 2935845674
370 2936002085
371 2936045212
372 2940557542
373 2941545846
374 8006940964
375 8006980839
376 8016521495
377 8017064136
378 8019583464
379 8019591277
380 8019600067

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07642

BBP2

Putative beta-barrel porin-2, OmpL-like. bbp2

197

604

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3upg-assembly1.cif.gz_A loop deletion mutant of salmonella typhi osmoporin (ompc):an outer membrane protein. 0.7391 136 543
3upg-assembly1.cif.gz_A loop deletion mutant of salmonella typhi osmoporin (ompc):an outer membrane protein. 0.7158 136 543
3wi5-assembly1.cif.gz_A crystal structure of the loop 7 mutant porb from neisseria meningitidis serogroup b 0.7093 136 543
3wi5-assembly1.cif.gz_A crystal structure of the loop 7 mutant porb from neisseria meningitidis serogroup b 0.706 136 543
6ehe-assembly1.cif.gz_A omptdeltal8 (loop l8 deletion mutant of ompt), an outer membrane protein of vibrio cholerae 0.705 136 543
ID Description Score Start End Superfamily
1e54A00 Mainly Beta;Beta Barrel;Porin;Porin 0.678 136 543 2.40.160.10
1e54A00 Mainly Beta;Beta Barrel;Porin;Porin 0.6728 136 543 2.40.160.10
3uu2B00 Mainly Beta;Beta Barrel;Porin;Porin 0.6626 136 543 2.40.160.10
af_Q9M2W6_94_225_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.6601 341 511 2.40.160.10
4auiC00 Mainly Beta;Beta Barrel;Porin;Porin 0.6531 136 543 2.40.160.10
ID Description Score Start End GO Terms
AF-A0A0C1XB30-F1-model_v4 deleted 0.9871 109 543
AF-A0A0C1XB30-F1-model_v4 deleted 0.9826 109 543
AF-A0A537MN61-F1-model_v4 Porin 0.9456 121 543
AF-A0A537MN61-F1-model_v4 Porin 0.9383 121 543
AF-A0A7G8BX67-F1-model_v4 Outer membrane beta-barrel protein 0.9224 68 543

Map