F300633

General Info

Members Datasets Scaffolds Average Seq Length
195 142 143 368

Family's Representative Sequence

Representative Sequence 3300048916|Ga0496113_0025203|Ga0496113_0025203_885_1994
Length 341
Sequence VGVADLADYPWDAVASYAARAAEHPDGLVDLSIGSPVDATPAVVAQALARATDAHAYPQTIGTPGLRHAITPAHVLPTVGSKELVALLPLLIGLGPGDVVVHPRAAYPTYEVGAKLVGATPFASDDPEEWPDRTRLVWVNSPGNPDGRVLDAVLASDECYAELGWDAPWDAEPVPSALDPRVTDGDVRGILSVYSLSKQSNLAGYRAAFVAGDPDIVRGLVAARKHLGLMLPAPVQAAMTAALGDDAHVVAQKERYRARRALLKPALEHAGFRIDGSKAGLYLWATEGRDAWESMGRLADLGILAGPGHFYGTHFPDHVRLSLTATDERVGAAAARLRGSA

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
3 2643221546 Microbacterium sp. Root53 Isolate Unclassified
4 2643221549 Agromyces sp. Root1464 Isolate Unclassified
5 2643221566 Microbacterium sp. Root166 Isolate Unclassified
6 2643221572 Leifsonia sp. Root60 Isolate Unclassified
7 2643221575 Microbacterium sp. Root61 Isolate Unclassified
8 2643221597 Microbacterium sp. Root180 Isolate Unclassified
9 2643221619 Agromyces sp. Root81 Isolate Unclassified
10 2643221630 Microbacterium sp. Root322 Isolate Unclassified
11 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
12 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
13 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
14 2773857759 Microbacterium sp. 1294 Isolate Unclassified
15 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
16 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
17 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
18 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
19 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
20 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
21 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
22 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
23 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
24 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
25 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
26 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
27 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
28 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
29 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
30 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
31 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
32 2919069694 Microbacterium sp. 1154 Isolate Unclassified
33 2919395869 Microbacterium resistens 2980 Isolate Unclassified
34 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
35 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
36 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
37 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
38 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
39 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
40 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
41 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
42 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
43 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
44 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
45 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
46 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
47 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
48 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
49 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
50 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
51 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
54 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
55 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
56 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
57 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
58 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
59 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
73 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
75 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
87 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
107 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
108 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
109 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
110 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
111 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
134 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
135 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
136 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
137 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
138 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
139 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
140 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
141 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
142 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.31
Metatranscriptomes 1.03
Isolates 26.67

Biome Distribution

Category Percentage (%)
Aerial Root 1.03
Bulb 0
Endosphere 10.77
Nodule 0
Rhizoplane 7.18
Rhizosphere 39.49
Stem 0
Stem Tuber 0.51
Unclassified 41.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1117044 3300003578 Bacteria 3667
2 Ga0006562J51391_1117045 3300003578 Bacteria 3360
3 Ga0055527_1000001 3300003760 Bacteria 850044
4 Ga0055529_1000019 3300003763 Bacteria 332786
5 Ga0070659_100177155 3300005366 Bacteria 1748
6 Ga0070700_100073161 3300005441 Bacteria 2193
7 Ga0068861_100108749 3300005719 Bacteria 2218
8 Ga0075365_10007252 3300006038 Bacteria 6197
9 Ga0075365_10012497 3300006038 Bacteria 5046
10 Ga0075368_10020821 3300006042 Bacteria 2486
11 Ga0075363_100013001 3300006048 Bacteria 4021
12 Ga0075364_10012667 3300006051 Bacteria 5166
13 Ga0075367_10000554 3300006178 Bacteria 14201
14 Ga0075370_10022591 3300006353 Bacteria 3456
15 Ga0105244_10026656 3300009036 Bacteria 3124
16 Ga0105243_10023515 3300009148 Bacteria 4693
17 Ga0105246_10295619 3300011119 Bacteria 1305
18 Ga0157370_10196822 3300013104 Bacteria 1870
19 Ga0157369_10369541 3300013105 Bacteria 1489
20 Ga0171462_1004 3300013250 Bacteria 678877
21 Ga0163162_10036594 3300013306 Bacteria 4894
22 Ga0157380_10019801 3300014326 Bacteria 5020
23 Ga0163161_10078164 3300017792 Bacteria 2432
24 Ga0209672_100006 3300025228 Bacteria 1004497
25 Ga0209147_100839 3300025229 Bacteria 14443
26 Ga0207427_100010 3300025231 Bacteria 648610
27 Ga0209258_101289 3300025242 Bacteria 9334
28 Ga0209646_1000092 3300025246 Bacteria 185930
29 Ga0209148_1000015 3300025254 Bacteria 850103
30 Ga0209233_1000001 3300025261 Bacteria 2992747
31 Ga0209455_1000013 3300025272 Bacteria 850103
32 Ga0207655_1032084 3300025728 Bacteria 2407
33 Ga0207647_10015336 3300025904 Bacteria 5257
34 Ga0207709_10055128 3300025935 Bacteria 2454
35 Ga0207675_100041417 3300026118 Bacteria 4302
36 Ga0307406_10000018 3300031901 Bacteria 101770
37 Ga0307406_10000608 3300031901 Bacteria 20477
38 Ga0307412_10045875 3300031911 Bacteria 2860
39 Ga0307416_100098880 3300032002 Bacteria 2532
40 Ga0307416_100133862 3300032002 Bacteria 2238
41 Ga0307416_100264094 3300032002 Bacteria 1685
42 Ga0307414_10188928 3300032004 Bacteria 1665
43 Ga0395900_0001956 3300037418 Bacteria 23265
44 Ga0395898_0000015 3300037466 Bacteria 439819
45 Ga0439465_0026082 3300041413 Bacteria 1847
46 Ga0466965_0010549 3300044683 Bacteria 4315
47 Ga0466965_0076305 3300044683 Bacteria 1691
48 Ga0466961_0067501 3300044693 Bacteria 2272
49 Ga0466968_0015460 3300044735 Bacteria 3025
50 Ga0466970_0000087 3300044765 Bacteria 38510
51 Ga0466970_0003128 3300044765 Bacteria 8040
52 Ga0466970_0012965 3300044765 Bacteria 4269
53 Ga0466970_0092892 3300044765 Bacteria 1639
54 Ga0466957_0076997 3300044842 Bacteria 2072
55 Ga0466960_0010011 3300044901 Bacteria 3926
56 Ga0495645_0034513 3300046543 Bacteria 3690
57 Ga0495686_0061725 3300047472 Bacteria 2327
58 Ga0496100_0002413 3300048903 Bacteria 9468
59 Ga0496101_0011888 3300048904 Bacteria 5796
60 Ga0496102_0129911 3300048905 Bacteria 2357
61 Ga0496104_0122952 3300048907 Bacteria 2491
62 Ga0496105_0091583 3300048908 Bacteria 2510
63 Ga0496107_0015259 3300048910 Bacteria 5384
64 Ga0496110_0031486 3300048913 Bacteria 4577
65 Ga0496112_0139469 3300048915 Bacteria 2394
66 Ga0496113_0025203 3300048916 Bacteria 4237
67 Ga0496114_0002924 3300048917 Bacteria 13089
68 Ga0496114_0141470 3300048917 Bacteria 2083
69 Ga0496115_0009778 3300048918 Bacteria 7142
70 Ga0496115_0018654 3300048918 Bacteria 5332
71 Ga0496115_0241432 3300048918 Bacteria 1489
72 Ga0496117_0000120 3300048920 Bacteria 171697
73 Ga0496117_0000585 3300048920 Bacteria 60104
74 Ga0496117_0004509 3300048920 Bacteria 15306
75 Ga0496117_0017836 3300048920 Bacteria 5915
76 Ga0496117_0026620 3300048920 Bacteria 4523
77 Ga0496118_0035775 3300048921 Bacteria 4026
78 Ga0496118_0040255 3300048921 Bacteria 3718
79 Ga0496119_0001131 3300048922 Bacteria 33628
80 Ga0496119_0003750 3300048922 Bacteria 15553
81 Ga0496119_0004770 3300048922 Bacteria 13316
82 Ga0496119_0012057 3300048922 Bacteria 7064
83 Ga0496119_0127934 3300048922 Bacteria 1387
84 Ga0496120_0001621 3300048923 Bacteria 26118
85 Ga0496120_0004904 3300048923 Bacteria 10892
86 Ga0496120_0010790 3300048923 Bacteria 6328
87 Ga0496122_0000036 3300048925 Bacteria 312598
88 Ga0496122_0000059 3300048925 Bacteria 247170
89 Ga0496122_0006803 3300048925 Bacteria 12984
90 Ga0496122_0010504 3300048925 Bacteria 9525
91 Ga0496122_0014918 3300048925 Bacteria 7478
92 Ga0496122_0032568 3300048925 Bacteria 4307
93 Ga0496122_0103446 3300048925 Bacteria 1895
94 Ga0496122_0124040 3300048925 Bacteria 1658
95 Ga0496123_0000011 3300048926 Bacteria 493925
96 Ga0496123_0000013 3300048926 Bacteria 439694
97 Ga0496123_0004732 3300048926 Bacteria 14093
98 Ga0496123_0023097 3300048926 Bacteria 4771
99 Ga0496124_0008565 3300048927 Bacteria 10676
100 Ga0496124_0026113 3300048927 Bacteria 5272
101 Ga0496124_0040824 3300048927 Bacteria 4010
102 Ga0496124_0060696 3300048927 Bacteria 3171
103 Ga0496124_0224764 3300048927 Bacteria 1409
104 Ga0496125_0000077 3300048928 Bacteria 232629
105 Ga0496125_0002149 3300048928 Bacteria 26411
106 Ga0496125_0003908 3300048928 Bacteria 17584
107 Ga0496125_0004016 3300048928 Bacteria 17286
108 Ga0496125_0030942 3300048928 Bacteria 4778
109 Ga0496125_0037546 3300048928 Bacteria 4209
110 Ga0496125_0100635 3300048928 Bacteria 2130
111 Ga0496125_0210387 3300048928 Bacteria 1264
112 Ga0496126_0000878 3300048929 Bacteria 52921
113 Ga0496126_0022220 3300048929 Bacteria 6176
114 Ga0496126_0032372 3300048929 Bacteria 4927
115 Ga0496126_0037025 3300048929 Bacteria 4557
116 Ga0496126_0037755 3300048929 Bacteria 4503
117 Ga0496126_0100761 3300048929 Bacteria 2527
118 Ga0501031_0002312 3300049568 Bacteria 12077
119 Ga0501032_0002033 3300049569 Bacteria 15964
120 Ga0501033_0001766 3300049570 Bacteria 18915
121 Ga0501034_0001971 3300049571 Bacteria 26025
122 Ga0501034_0026499 3300049571 Bacteria 5904
123 Ga0501036_0002578 3300049572 Bacteria 14257
124 Ga0501037_0013918 3300049573 Bacteria 5928
125 Ga0501038_0008265 3300049574 Bacteria 9578
126 Ga0501038_0027379 3300049574 Bacteria 5071
127 Ga0501039_0002439 3300049575 Bacteria 13848
128 Ga0501043_0219446 3300049579 Bacteria 1471
129 Ga0501046_0033484 3300049580 Bacteria 4151
130 Ga0501047_0097230 3300049581 Bacteria 2822
131 Ga0501048_0016695 3300049582 Bacteria 5412
132 Ga0501070_0074476 3300049586 Bacteria 2810
133 Ga0501070_0149878 3300049586 Bacteria 1924
134 Ga0501076_0060982 3300049592 Bacteria 3002
135 Ga0501035_0026811 3300049822 Bacteria 5270
136 Ga0501035_0050117 3300049822 Bacteria 3742
137 Ga0501044_0040759 3300049823 Bacteria 4838
138 Ga0501045_0021165 3300049824 Bacteria 4650
139 nmdc:mga0yw44_85242_c1 3300050492 Bacteria 1988
140 nmdc:mga06z11_13032_c1 3300050494 Bacteria 3636
141 nmdc:mga07m45_31701_c1 3300050496 Bacteria 2930
142 nmdc:mga0sz30_57313_c1 3300050516 Bacteria 1660
143 Ga0500635_0000039 3300053080 Bacteria 93004

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048925 Ga0496122_0103446 Ga0496122_0103446_19_948 309
2 3300044765 Ga0466970_0092892 Ga0466970_0092892_23_955 310
3 3300048916 Ga0496113_0025203 Ga0496113_0025203_885_1994 341
4 3300048922 Ga0496119_0012057 Ga0496119_0012057_5685_6806 345
5 3300044683 Ga0466965_0076305 Ga0466965_0076305_166_1230 354
6 3300048929 Ga0496126_0000878 Ga0496126_0000878_5282_6346 354
7 3300048925 Ga0496122_0124040 Ga0496122_0124040_323_1393 356
8 3300041413 Ga0439465_0026082 Ga0439465_0026082_326_1402 358
9 3300048905 Ga0496102_0129911 Ga0496102_0129911_24_1100 358
10 3300037418 Ga0395900_0001956 Ga0395900_0001956_5618_6712 359
11 3300037466 Ga0395898_0000015 Ga0395898_0000015_246710_247804 359
12 3300048918 Ga0496115_0018654 Ga0496115_0018654_941_2020 359
13 3300053080 Ga0500635_0000039 Ga0500635_0000039_32101_33180 359
14 3300048920 Ga0496117_0000120 Ga0496117_0000120_137431_138519 360
15 iso_pu_bacteria 2757320536 2758226494 363
16 iso_pu_bacteria 2773857758 2774380019 363
17 iso_pu_bacteria 2904509784 2904511628 363
18 iso_pu_bacteria 2908678064 2908680560 363
19 iso_pu_bacteria 2919069694 2919071884 363
20 iso_pu_bacteria 2974294766 2974297549 363
21 iso_pu_bacteria 2974324384 2974326214 363
22 iso_pu_bacteria 2977228692 2977231782 363
23 iso_pu_bacteria 2977236895 2977237139 363
24 iso_pu_bacteria 2977264416 2977267091 363
25 iso_pu_bacteria 2984542743 2984545071 363
26 iso_pu_bacteria 8016254467 8016257191 363
27 iso_pu_bacteria 2643221572 2643875818 364
28 iso_pu_bacteria 2643221669 2644382873 364
29 iso_pu_bacteria 2811994872 2812323684 364
30 iso_pu_bacteria 2852632344 2852634515 364
31 iso_pu_bacteria 2857720070 2857721957 364
32 iso_pu_bacteria 2870628048 2870630725 364
33 iso_pu_bacteria 2928090899 2928091781 364
34 iso_pu_bacteria 2984580707 2984581459 364
35 iso_pu_bacteria 2585428157 2588108786 365
36 iso_pu_bacteria 2643221566 2643849301 365
37 iso_pu_bacteria 2643221597 2643995502 365
38 iso_pu_bacteria 2821268502 2821270394 365
39 iso_pu_bacteria 2833709550 2833711362 365
40 iso_pu_bacteria 2966921586 2966921727 365
41 iso_pu_bacteria 8004212874 8004213757 365
42 3300009148 Ga0105243_10023515 Ga0105243_100235157 366
43 3300025728 Ga0207655_1032084 Ga0207655_10320842 366
44 3300025935 Ga0207709_10055128 Ga0207709_100551282 366
45 iso_pu_bacteria 2643221546 2643752839 366
46 iso_pu_bacteria 2844852863 2844855903 366
47 iso_pu_bacteria 2852646457 2852646757 366
48 iso_pu_bacteria 2852663356 2852664596 366
49 iso_pu_bacteria 2857723135 2857723214 366
50 iso_pu_bacteria 2919395869 2919396001 366
51 iso_pu_bacteria 2945968032 2945971190 366
52 iso_pu_bacteria 2946080515 2946081543 366
53 iso_pu_bacteria 2977251589 2977254357 366
54 iso_pu_bacteria 8004182704 8004185876 366
55 iso_pu_bacteria 8056037122 8056039781 366
56 3300005366 Ga0070659_100177155 Ga0070659_1001771552 367
57 3300009036 Ga0105244_10026656 Ga0105244_100266562 367
58 3300013104 Ga0157370_10196822 Ga0157370_101968223 367
59 3300025904 Ga0207647_10015336 Ga0207647_100153363 367
60 3300048920 Ga0496117_0000585 Ga0496117_0000585_186_1289 367
61 3300048922 Ga0496119_0004770 Ga0496119_0004770_120_1223 367
62 3300048922 Ga0496119_0127934 Ga0496119_0127934_128_1231 367
63 3300048923 Ga0496120_0001621 Ga0496120_0001621_115_1218 367
64 3300048923 Ga0496120_0010790 Ga0496120_0010790_3539_4642 367
65 3300048925 Ga0496122_0014918 Ga0496122_0014918_6195_7298 367
66 3300048926 Ga0496123_0004732 Ga0496123_0004732_6779_7882 367
67 3300048927 Ga0496124_0060696 Ga0496124_0060696_1750_2853 367
68 3300048927 Ga0496124_0224764 Ga0496124_0224764_142_1245 367
69 3300048928 Ga0496125_0004016 Ga0496125_0004016_6340_7443 367
70 3300048929 Ga0496126_0022220 Ga0496126_0022220_132_1235 367
71 3300048929 Ga0496126_0037755 Ga0496126_0037755_987_2090 367
72 iso_pu_bacteria 2643221549 2643769689 367
73 iso_pu_bacteria 2643221575 2643885917 367
74 iso_pu_bacteria 2643221619 2644114339 367
75 iso_pu_bacteria 2773857759 2774384129 367
76 iso_pu_bacteria 2808606447 2809227760 367
77 iso_pu_bacteria 2919443155 2919446801 367
78 iso_pu_bacteria 8057345674 8057348317 367
79 3300006038 Ga0075365_10012497 Ga0075365_100124972 368
80 3300006042 Ga0075368_10020821 Ga0075368_100208214 368
81 3300006048 Ga0075363_100013001 Ga0075363_1000130015 368
82 3300006051 Ga0075364_10012667 Ga0075364_100126677 368
83 3300006178 Ga0075367_10000554 Ga0075367_100005543 368
84 3300006353 Ga0075370_10022591 Ga0075370_100225912 368
85 3300046543 Ga0495645_0034513 Ga0495645_0034513_426_1532 368
86 3300047472 Ga0495686_0061725 Ga0495686_0061725_706_1812 368
87 3300048921 Ga0496118_0035775 Ga0496118_0035775_1824_2930 368
88 3300048927 Ga0496124_0040824 Ga0496124_0040824_1244_2350 368
89 3300048928 Ga0496125_0000077 Ga0496125_0000077_212959_214065 368
90 3300048928 Ga0496125_0210387 Ga0496125_0210387_27_1133 368
91 3300049571 Ga0501034_0026499 Ga0501034_0026499_1491_2597 368
92 3300049574 Ga0501038_0008265 Ga0501038_0008265_7360_8466 368
93 3300050492 nmdc:mga0yw44_85242_c1 nmdc:mga0yw44_85242_c1_405_1511 368
94 3300050494 nmdc:mga06z11_13032_c1 nmdc:mga06z11_13032_c1_844_1950 368
95 3300050496 nmdc:mga07m45_31701_c1 nmdc:mga07m45_31701_c1_1303_2409 368
96 iso_pu_bacteria 2884763398 2884765846 368
97 3300006038 Ga0075365_10007252 Ga0075365_100072528 369
98 3300017792 Ga0163161_10078164 Ga0163161_100781642 369
99 3300048917 Ga0496114_0141470 Ga0496114_0141470_259_1368 369
100 3300048918 Ga0496115_0241432 Ga0496115_0241432_249_1358 369
101 3300048920 Ga0496117_0026620 Ga0496117_0026620_110_1219 369
102 3300048928 Ga0496125_0037546 Ga0496125_0037546_1099_2208 369
103 3300048929 Ga0496126_0100761 Ga0496126_0100761_372_1481 369
104 3300050516 nmdc:mga0sz30_57313_c1 nmdc:mga0sz30_57313_c1_115_1224 369
105 iso_pu_bacteria 2643221542 2643732054 369
106 iso_pu_bacteria 2643221630 2644170869 369
107 iso_pu_bacteria 2773857763 2774399034 369
108 iso_pu_bacteria 2808606306 2808630814 369
109 iso_pu_bacteria 2808606368 2808885977 369
110 iso_pu_bacteria 8045830549 8045831452 369
111 3300025246 Ga0209646_1000092 Ga0209646_100009251 370
112 3300031901 Ga0307406_10000608 Ga0307406_1000060815 370
113 3300044765 Ga0466970_0000087 Ga0466970_0000087_33879_34991 370
114 3300048920 Ga0496117_0004509 Ga0496117_0004509_8521_9633 370
115 3300048920 Ga0496117_0017836 Ga0496117_0017836_4131_5243 370
116 3300048921 Ga0496118_0040255 Ga0496118_0040255_791_1903 370
117 3300048922 Ga0496119_0001131 Ga0496119_0001131_28624_29736 370
118 3300048922 Ga0496119_0003750 Ga0496119_0003750_6630_7742 370
119 3300048923 Ga0496120_0004904 Ga0496120_0004904_7814_8926 370
120 3300048925 Ga0496122_0000036 Ga0496122_0000036_88499_89611 370
121 3300048925 Ga0496122_0000059 Ga0496122_0000059_238066_239178 370
122 3300048925 Ga0496122_0010504 Ga0496122_0010504_2487_3599 370
123 3300048925 Ga0496122_0032568 Ga0496122_0032568_2709_3821 370
124 3300048926 Ga0496123_0000011 Ga0496123_0000011_88575_89687 370
125 3300048926 Ga0496123_0000013 Ga0496123_0000013_337602_338714 370
126 3300048927 Ga0496124_0008565 Ga0496124_0008565_3733_4845 370
127 3300048927 Ga0496124_0026113 Ga0496124_0026113_874_1986 370
128 3300048928 Ga0496125_0002149 Ga0496125_0002149_12146_13258 370
129 3300048928 Ga0496125_0003908 Ga0496125_0003908_16332_17444 370
130 3300048928 Ga0496125_0030942 Ga0496125_0030942_1943_3055 370
131 3300048928 Ga0496125_0100635 Ga0496125_0100635_830_1942 370
132 3300048929 Ga0496126_0032372 Ga0496126_0032372_1824_2936 370
133 3300048929 Ga0496126_0037025 Ga0496126_0037025_1177_2289 370
134 3300005441 Ga0070700_100073161 Ga0070700_1000731612 371
135 3300005719 Ga0068861_100108749 Ga0068861_1001087492 371
136 3300011119 Ga0105246_10295619 Ga0105246_102956191 371
137 3300014326 Ga0157380_10019801 Ga0157380_100198017 371
138 3300026118 Ga0207675_100041417 Ga0207675_1000414172 371
139 3300031901 Ga0307406_10000018 Ga0307406_1000001899 371
140 3300032002 Ga0307416_100098880 Ga0307416_1000988802 371
141 3300032002 Ga0307416_100264094 Ga0307416_1002640942 371
142 3300032004 Ga0307414_10188928 Ga0307414_101889281 371
143 3300048925 Ga0496122_0006803 Ga0496122_0006803_4223_5338 371
144 3300048926 Ga0496123_0023097 Ga0496123_0023097_3157_4272 371
145 3300049592 Ga0501076_0060982 Ga0501076_0060982_862_1977 371
146 3300003760 Ga0055527_1000001 Ga0055527_1000001678 372
147 3300003763 Ga0055529_1000019 Ga0055529_1000019184 372
148 3300025228 Ga0209672_100006 Ga0209672_100006297 372
149 3300025229 Ga0209147_100839 Ga0209147_1008398 372
150 3300025231 Ga0207427_100010 Ga0207427_100010285 372
151 3300025242 Ga0209258_101289 Ga0209258_1012894 372
152 3300025254 Ga0209148_1000015 Ga0209148_1000015141 372
153 3300025261 Ga0209233_1000001 Ga0209233_10000011664 372
154 3300025272 Ga0209455_1000013 Ga0209455_1000013141 372
155 3300044683 Ga0466965_0010549 Ga0466965_0010549_1678_2796 372
156 3300044693 Ga0466961_0067501 Ga0466961_0067501_1095_2213 372
157 3300044735 Ga0466968_0015460 Ga0466968_0015460_1240_2358 372
158 3300044765 Ga0466970_0003128 Ga0466970_0003128_2625_3743 372
159 3300044765 Ga0466970_0012965 Ga0466970_0012965_1742_2860 372
160 3300044842 Ga0466957_0076997 Ga0466957_0076997_203_1321 372
161 3300044901 Ga0466960_0010011 Ga0466960_0010011_1649_2767 372
162 3300049568 Ga0501031_0002312 Ga0501031_0002312_605_1723 372
163 3300049569 Ga0501032_0002033 Ga0501032_0002033_12539_13657 372
164 3300049570 Ga0501033_0001766 Ga0501033_0001766_13959_15077 372
165 3300049571 Ga0501034_0001971 Ga0501034_0001971_20909_22027 372
166 3300049572 Ga0501036_0002578 Ga0501036_0002578_12182_13300 372
167 3300049573 Ga0501037_0013918 Ga0501037_0013918_844_1962 372
168 3300049574 Ga0501038_0027379 Ga0501038_0027379_2308_3426 372
169 3300049575 Ga0501039_0002439 Ga0501039_0002439_952_2070 372
170 3300049579 Ga0501043_0219446 Ga0501043_0219446_76_1194 372
171 3300049580 Ga0501046_0033484 Ga0501046_0033484_405_1523 372
172 3300049581 Ga0501047_0097230 Ga0501047_0097230_1562_2680 372
173 3300049582 Ga0501048_0016695 Ga0501048_0016695_1026_2144 372
174 3300049586 Ga0501070_0149878 Ga0501070_0149878_248_1366 372
175 3300049822 Ga0501035_0026811 Ga0501035_0026811_930_2063 372
176 3300049822 Ga0501035_0050117 Ga0501035_0050117_2180_3298 372
177 3300049823 Ga0501044_0040759 Ga0501044_0040759_2342_3460 372
178 3300049824 Ga0501045_0021165 Ga0501045_0021165_2597_3715 372
179 3300003578 Ga0006562J51391_1117044 Ga0006562J51391_11170446 373
180 3300003578 Ga0006562J51391_1117045 Ga0006562J51391_11170451 373
181 3300013105 Ga0157369_10369541 Ga0157369_103695411 373
182 3300013250 Ga0171462_1004 Ga0171462_10045 373
183 3300013306 Ga0163162_10036594 Ga0163162_100365942 373
184 3300031911 Ga0307412_10045875 Ga0307412_100458753 373
185 3300032002 Ga0307416_100133862 Ga0307416_1001338622 373
186 3300048903 Ga0496100_0002413 Ga0496100_0002413_1107_2237 373
187 3300048904 Ga0496101_0011888 Ga0496101_0011888_3060_4190 373
188 3300048907 Ga0496104_0122952 Ga0496104_0122952_569_1699 373
189 3300048908 Ga0496105_0091583 Ga0496105_0091583_588_1718 373
190 3300048910 Ga0496107_0015259 Ga0496107_0015259_2278_3408 373
191 3300048913 Ga0496110_0031486 Ga0496110_0031486_1258_2388 373
192 3300048915 Ga0496112_0139469 Ga0496112_0139469_515_1645 373
193 3300048917 Ga0496114_0002924 Ga0496114_0002924_1607_2737 373
194 3300048918 Ga0496115_0009778 Ga0496115_0009778_3713_4843 373
195 3300049586 Ga0501070_0074476 Ga0501070_0074476_1403_2524 373

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

26

337

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o1b-assembly1.cif.gz_A-2 structure of aminotransferase from staphylococcus aureus 0.901 25 367
3jtx-assembly1.cif.gz_B crystal structure of aminotransferase (np_283882.1) from neisseria meningitidis z2491 at 1.91 a resolution 0.8964 4 367
6l1l-assembly1.cif.gz_A apo-bacf structure from bacillus subtillis 0.8845 29 367
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.884 5 367
5bj4-assembly1.cif.gz_A thermus thermophilus aspartate aminotransferase tetra mutant 2 0.8817 28 367
ID Description Score Start End Superfamily
af_O50434_40_267_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9561 41 271 3.40.640.10
af_O50434_40_267_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.948 41 271 3.40.640.10
3ezsB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8783 40 271 3.40.640.10
af_A0A0R0HX06_142_231_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8772 215 272 3.90.1150.10
2o0rA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8745 41 271 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A173LX42-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9891 5 367 GO:0008483
GO:0009058
GO:0030170
AF-A0A4S3Q2V9-F1-model_v4 deleted 0.9868 277 365
AF-A0A2A5NVR5-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9849 5 367 GO:0008483
GO:0009058
GO:0030170
AF-A0A6J6XEV3-F1-model_v4 Unannotated protein 0.9808 183 364 GO:0008483
GO:0009058
GO:0030170
AF-W4TES7-F1-model_v4 deleted 0.9796 9 365

Feature Viewer

pLDDT pTM Quality
92.41 0.91 High
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Predicted Structure (AlphaFold2)

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