F300021

General Info

Members Datasets Scaffolds Average Seq Length
195 121 390 378

Family's Representative Sequence

Representative Sequence 3300009101|Ga0105247_10037533|Ga0105247_100375332
Length 427
Sequence VPFFNLFADAFPVFVQTAKFPISIFPVNFCLPPSVLLCFFFVGKIILPNSTIGVFGSGQLGRMFAIEARKMGYRVHTYSHGRDTPTGQVADVETCAEYEDLDAVRKFARSVDVVTFEFENVPSATVEAAAEFIDVHPRGEILYTTQNRLREKTFLAGKGFPVTPFRHIKLIDDLYRAADDLGFPSVLKTAGFGYDGKGQAKLKEPHDIEPAFAAMNGDEAVLEAFVDFAKEVSVVCARDQEGNFAHFGVIENEHTNHILDVSFAPAVVSKKVFGEADEIAREIAATMEYVGALCIEFFLTRDEKLLVNEIAPRPHNSGHLTLDACVTSQFEQQVRAVCGLPLGSTEFYRPAAMANLLGDIWENGEPNWPAALEESNIKLHLYGKAEPRPGRKMGHLTVLSETTDDAVVSVKSARELLRVHAPESLLR

Samples

Sample ID Description Type Environment
1 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
71 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
76 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
90 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
92 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
93 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
102 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
116 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
120 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0.51
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.54
Nodule 0
Rhizoplane 0
Rhizosphere 95.38
Stem 0
Stem Tuber 0
Unclassified 9.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105247_10037533 3300009101 Bacteria 2956
2 LJQas_1000149 3300000549 Bacteria 12392
3 rootH1_10039279 3300003316 Bacteria 3313
4 rootL2_10001832 3300003322 Bacteria 5315
5 Ga0070658_10016341 3300005327 Bacteria 5940
6 Ga0070670_100011684 3300005331 Bacteria 7511
7 Ga0070670_100022580 3300005331 Bacteria 5414
8 Ga0070670_100062175 3300005331 Bacteria 3205
9 Ga0070670_100253981 3300005331 Bacteria 1532
10 Ga0070666_10006734 3300005335 Bacteria 7074
11 Ga0070689_100166745 3300005340 Unclassified 1783
12 Ga0070671_100006430 3300005355 Bacteria 9388
13 Ga0070688_100007346 3300005365 Bacteria 5938
14 Ga0070667_100009159 3300005367 Bacteria 8196
15 Ga0070714_100068148 3300005435 Bacteria 3070
16 Ga0070662_100023215 3300005457 Unclassified 4259
17 Ga0068853_100066330 3300005539 Unclassified 3134
18 Ga0068853_100108162 3300005539 Bacteria 2466
19 Ga0070695_100024649 3300005545 Unclassified 3709
20 Ga0070704_100077758 3300005549 Bacteria 2432
21 Ga0070664_100029247 3300005564 Unclassified 4593
22 Ga0068857_100049101 3300005577 Unclassified 3745
23 Ga0068852_100263145 3300005616 Unclassified 1657
24 Ga0068859_100008333 3300005617 Bacteria 10505
25 Ga0068859_100060939 3300005617 Bacteria 3802
26 Ga0068859_100069940 3300005617 Bacteria 3545
27 Ga0068864_100011041 3300005618 Bacteria 7465
28 Ga0068864_100019101 3300005618 Bacteria 5729
29 Ga0068864_100144899 3300005618 Unclassified 2146
30 Ga0068863_100053075 3300005841 Bacteria 3841
31 Ga0068858_100088451 3300005842 Bacteria 2882
32 Ga0068860_100010789 3300005843 Bacteria 9018
33 Ga0068860_100037822 3300005843 Bacteria 4618
34 Ga0068860_100262040 3300005843 Bacteria 1685
35 Ga0070715_10038146 3300006163 Unclassified 1993
36 Ga0068865_100074482 3300006881 Unclassified 2418
37 Ga0097620_100008333 3300006931 Bacteria 10505
38 Ga0097620_100060938 3300006931 Bacteria 3802
39 Ga0097620_100069940 3300006931 Bacteria 3545
40 Ga0111539_10115362 3300009094 Bacteria 3150
41 Ga0105247_10011379 3300009101 Bacteria 5365
42 Ga0105241_10046908 3300009174 Bacteria 3283
43 Ga0105248_10017235 3300009177 Bacteria 7960
44 Ga0105248_10202168 3300009177 Bacteria 2238
45 Ga0105248_10204401 3300009177 Bacteria 2226
46 Ga0105238_10000071 3300009551 Bacteria 115018
47 Ga0105249_10019789 3300009553 Bacteria 6008
48 Ga0105249_10058653 3300009553 Bacteria 3528
49 Ga0157373_10004741 3300013100 Bacteria 10231
50 Ga0157369_10071715 3300013105 Unclassified 3717
51 Ga0157374_10024388 3300013296 Bacteria 5423
52 Ga0163162_10072359 3300013306 Bacteria 3502
53 Ga0157372_10019809 3300013307 Bacteria 7250
54 Ga0157372_10181194 3300013307 Bacteria 2438
55 Ga0157375_10063202 3300013308 Bacteria 3682
56 Ga0157375_10377217 3300013308 Bacteria 1585
57 Ga0163163_10067184 3300014325 Bacteria 3563
58 Ga0163163_10152543 3300014325 Bacteria 2354
59 Ga0157380_10067024 3300014326 Bacteria 2889
60 Ga0157380_10302890 3300014326 Bacteria 1473
61 Ga0157376_10080630 3300014969 Unclassified 2792
62 Ga0163161_10002102 3300017792 Bacteria 14422
63 Ga0163161_10003209 3300017792 Bacteria 11498
64 Ga0213872_10000165 3300021361 Bacteria 60035
65 Ga0213872_10000560 3300021361 Bacteria 28837
66 Ga0213872_10003944 3300021361 Bacteria 8032
67 Ga0213872_10063088 3300021361 Bacteria 1674
68 Ga0213875_10000014 3300021388 Bacteria 290943
69 Ga0209148_1001952 3300025254 Bacteria 8334
70 Ga0209455_1000541 3300025272 Bacteria 26163
71 Ga0207710_10009211 3300025900 Bacteria 4154
72 Ga0207710_10033440 3300025900 Bacteria 2256
73 Ga0207647_10035597 3300025904 Bacteria 3171
74 Ga0207654_10151241 3300025911 Bacteria 1490
75 Ga0207652_10144721 3300025921 Bacteria 2127
76 Ga0207681_10187555 3300025923 Bacteria 1580
77 Ga0207650_10006392 3300025925 Bacteria 8024
78 Ga0207650_10124546 3300025925 Bacteria 2010
79 Ga0207700_10009529 3300025928 Bacteria 6074
80 Ga0207644_10042590 3300025931 Bacteria 3218
81 Ga0207670_10140059 3300025936 Unclassified 1783
82 Ga0207711_10009387 3300025941 Bacteria 8168
83 Ga0207711_10205226 3300025941 Bacteria 1799
84 Ga0207679_10091850 3300025945 Bacteria 2350
85 Ga0207679_10171254 3300025945 Bacteria 1788
86 Ga0207712_10005880 3300025961 Bacteria 7734
87 Ga0207712_10106332 3300025961 Bacteria 2096
88 Ga0207640_10029445 3300025981 Unclassified 3371
89 Ga0207703_10004918 3300026035 Bacteria 10847
90 Ga0207703_10036481 3300026035 Bacteria 3913
91 Ga0207639_10020700 3300026041 Bacteria 4712
92 Ga0207641_10016081 3300026088 Bacteria 6128
93 Ga0207641_10092201 3300026088 Bacteria 2653
94 Ga0207648_10085031 3300026089 Unclassified 2759
95 Ga0207676_10003539 3300026095 Bacteria 11047
96 Ga0207676_10221160 3300026095 Unclassified 1686
97 Ga0207674_10030101 3300026116 Bacteria 5710
98 Ga0207675_100232341 3300026118 Bacteria 1779
99 Ga0207698_10163531 3300026142 Bacteria 1950
100 Ga0268265_10032749 3300028380 Bacteria 3771
101 Ga0268265_10064524 3300028380 Bacteria 2821
102 Ga0268264_10010483 3300028381 Bacteria 7663
103 Ga0268264_10042005 3300028381 Bacteria 3783
104 Ga0265318_10002846 3300028577 Bacteria 9035
105 Ga0265320_10012871 3300031240 Bacteria 4839
106 Ga0265320_10016033 3300031240 Bacteria 4211
107 Ga0307408_100043731 3300031548 Bacteria 3188
108 Ga0307408_100236143 3300031548 Unclassified 1500
109 Ga0316579_10009386 3300031691 Bacteria 4112
110 Ga0316579_10013714 3300031691 Bacteria 3490
111 Ga0265314_10055391 3300031711 Bacteria 2738
112 Ga0316576_10246524 3300031727 Bacteria 1341
113 Ga0316578_10072107 3300031728 Bacteria 2045
114 Ga0307405_10052246 3300031731 Bacteria 2540
115 Ga0316577_10060767 3300031733 Bacteria 2109
116 Ga0316577_10064053 3300031733 Bacteria 2052
117 Ga0316577_10065983 3300031733 Bacteria 2021
118 Ga0307413_10001545 3300031824 Bacteria 8847
119 Ga0307413_10002584 3300031824 Bacteria 7402
120 Ga0307413_10027012 3300031824 Bacteria 3173
121 Ga0307413_10183128 3300031824 Bacteria 1496
122 Ga0307410_10000355 3300031852 Bacteria 17795
123 Ga0307410_10004780 3300031852 Bacteria 7068
124 Ga0307410_10011946 3300031852 Bacteria 4993
125 Ga0307410_10036366 3300031852 Bacteria 3206
126 Ga0307410_10059163 3300031852 Bacteria 2615
127 Ga0307406_10003016 3300031901 Bacteria 9162
128 Ga0307406_10048454 3300031901 Bacteria 2684
129 Ga0307406_10156624 3300031901 Bacteria 1632
130 Ga0307407_10002312 3300031903 Bacteria 7403
131 Ga0307407_10011085 3300031903 Bacteria 4277
132 Ga0307407_10041014 3300031903 Bacteria 2586
133 Ga0307407_10050822 3300031903 Bacteria 2373
134 Ga0307412_10002274 3300031911 Bacteria 10630
135 Ga0307412_10013735 3300031911 Bacteria 4757
136 Ga0307412_10245787 3300031911 Bacteria 1387
137 Ga0307409_100014252 3300031995 Bacteria 5160
138 Ga0307409_100060159 3300031995 Bacteria 2961
139 Ga0307409_100092613 3300031995 Bacteria 2480
140 Ga0307416_100005297 3300032002 Bacteria 7905
141 Ga0307414_10001151 3300032004 Bacteria 13568
142 Ga0307414_10002993 3300032004 Bacteria 8953
143 Ga0307414_10005777 3300032004 Bacteria 6839
144 Ga0307411_10003977 3300032005 Bacteria 6979
145 Ga0307411_10008253 3300032005 Bacteria 5378
146 Ga0307411_10025337 3300032005 Bacteria 3552
147 Ga0307415_100011467 3300032126 Bacteria 5074
148 Ga0307415_100048480 3300032126 Bacteria 2867
149 Ga0316583_10009356 3300032133 Bacteria 3528
150 Ga0316596_1021299 3300033541 Bacteria 1652
151 Ga0316574_0021411 3300035398 Bacteria 3838
152 Ga0316574_0032277 3300035398 Bacteria 3182
153 Ga0316574_0034513 3300035398 Bacteria 3085
154 Ga0316574_0035084 3300035398 Bacteria 3063
155 Ga0316574_0085429 3300035398 Bacteria 2008
156 Ga0316582_0019082 3300036647 Bacteria 4006
157 Ga0316582_0063046 3300036647 Bacteria 2381
158 Ga0316584_0029803 3300036712 Bacteria 4029
159 Ga0316584_0046721 3300036712 Bacteria 3234
160 Ga0316584_0201471 3300036712 Bacteria 1468
161 Ga0395900_0091816 3300037418 Unclassified 3120
162 Ga0395905_0066552 3300037471 Bacteria 3374
163 Ga0316581_0015048 3300037588 Bacteria 2207
164 Ga0436364_1220798 3300037853 Bacteria 180734
165 Ga0400487_46693 3300039110 Bacteria 1808
166 Ga0436365_1909070 3300039437 Bacteria 1250
167 Ga0436361_0519338 3300039447 Bacteria 52980
168 Ga0436361_0781815 3300039447 Bacteria 9590
169 Ga0436361_1213391 3300039447 Bacteria 89294
170 Ga0439465_0018279 3300041413 Bacteria 2191
171 Ga0450889_004701 3300042144 Bacteria 1351
172 Ga0466966_0046498 3300044684 Bacteria 2771
173 Ga0466959_0088293 3300045049 Bacteria 2229
174 Ga0495645_0111341 3300046543 Bacteria 1937
175 Ga0495668_0000711 3300046616 Bacteria 40155
176 Ga0501031_0064954 3300049568 Bacteria 2377
177 Ga0501032_0000970 3300049569 Bacteria 23236
178 Ga0501032_0033475 3300049569 Bacteria 3521
179 Ga0501033_0003808 3300049570 Bacteria 12269
180 Ga0501037_0007217 3300049573 Bacteria 8120
181 Ga0501038_0016154 3300049574 Bacteria 6773
182 Ga0501043_0106636 3300049579 Bacteria 2201
183 Ga0501046_0002277 3300049580 Bacteria 18101
184 Ga0501046_0008889 3300049580 Bacteria 8723
185 Ga0501048_0110230 3300049582 Bacteria 1943
186 Ga0501221_015776 3300049704 Bacteria 1422
187 Ga0501268_006566 3300049765 Bacteria 1713
188 Ga0501035_0019361 3300049822 Bacteria 6262
189 Ga0501035_0106879 3300049822 Bacteria 2453
190 Ga0501035_0144049 3300049822 Bacteria 2070
191 Ga0501035_0188342 3300049822 Bacteria 1775
192 Ga0501044_0037835 3300049823 Bacteria 5041
193 Ga0500616_0026145 3300053153 Bacteria 3233
194 Ga0590071_012814 3300059421 Bacteria 1965
195 Ga0501082_0383057 3300060353 Bacteria 1227
196 Ga0105247_10037533
197 LJQas_1000149
198 rootH1_10039279
199 rootL2_10001832
200 Ga0070658_10016341
201 Ga0070670_100011684
202 Ga0070670_100022580
203 Ga0070670_100062175
204 Ga0070670_100253981
205 Ga0070666_10006734
206 Ga0070689_100166745
207 Ga0070671_100006430
208 Ga0070688_100007346
209 Ga0070667_100009159
210 Ga0070714_100068148
211 Ga0070662_100023215
212 Ga0068853_100066330
213 Ga0068853_100108162
214 Ga0070695_100024649
215 Ga0070704_100077758
216 Ga0070664_100029247
217 Ga0068857_100049101
218 Ga0068852_100263145
219 Ga0068859_100008333
220 Ga0068859_100060939
221 Ga0068859_100069940
222 Ga0068864_100011041
223 Ga0068864_100019101
224 Ga0068864_100144899
225 Ga0068863_100053075
226 Ga0068858_100088451
227 Ga0068860_100010789
228 Ga0068860_100037822
229 Ga0068860_100262040
230 Ga0070715_10038146
231 Ga0068865_100074482
232 Ga0097620_100008333
233 Ga0097620_100060938
234 Ga0097620_100069940
235 Ga0111539_10115362
236 Ga0105247_10011379
237 Ga0105241_10046908
238 Ga0105248_10017235
239 Ga0105248_10202168
240 Ga0105248_10204401
241 Ga0105238_10000071
242 Ga0105249_10019789
243 Ga0105249_10058653
244 Ga0157373_10004741
245 Ga0157369_10071715
246 Ga0157374_10024388
247 Ga0163162_10072359
248 Ga0157372_10019809
249 Ga0157372_10181194
250 Ga0157375_10063202
251 Ga0157375_10377217
252 Ga0163163_10067184
253 Ga0163163_10152543
254 Ga0157380_10067024
255 Ga0157380_10302890
256 Ga0157376_10080630
257 Ga0163161_10002102
258 Ga0163161_10003209
259 Ga0213872_10000165
260 Ga0213872_10000560
261 Ga0213872_10003944
262 Ga0213872_10063088
263 Ga0213875_10000014
264 Ga0209148_1001952
265 Ga0209455_1000541
266 Ga0207710_10009211
267 Ga0207710_10033440
268 Ga0207647_10035597
269 Ga0207654_10151241
270 Ga0207652_10144721
271 Ga0207681_10187555
272 Ga0207650_10006392
273 Ga0207650_10124546
274 Ga0207700_10009529
275 Ga0207644_10042590
276 Ga0207670_10140059
277 Ga0207711_10009387
278 Ga0207711_10205226
279 Ga0207679_10091850
280 Ga0207679_10171254
281 Ga0207712_10005880
282 Ga0207712_10106332
283 Ga0207640_10029445
284 Ga0207703_10004918
285 Ga0207703_10036481
286 Ga0207639_10020700
287 Ga0207641_10016081
288 Ga0207641_10092201
289 Ga0207648_10085031
290 Ga0207676_10003539
291 Ga0207676_10221160
292 Ga0207674_10030101
293 Ga0207675_100232341
294 Ga0207698_10163531
295 Ga0268265_10032749
296 Ga0268265_10064524
297 Ga0268264_10010483
298 Ga0268264_10042005
299 Ga0265318_10002846
300 Ga0265320_10012871
301 Ga0265320_10016033
302 Ga0307408_100043731
303 Ga0307408_100236143
304 Ga0316579_10009386
305 Ga0316579_10013714
306 Ga0265314_10055391
307 Ga0316576_10246524
308 Ga0316578_10072107
309 Ga0307405_10052246
310 Ga0316577_10060767
311 Ga0316577_10064053
312 Ga0316577_10065983
313 Ga0307413_10001545
314 Ga0307413_10002584
315 Ga0307413_10027012
316 Ga0307413_10183128
317 Ga0307410_10000355
318 Ga0307410_10004780
319 Ga0307410_10011946
320 Ga0307410_10036366
321 Ga0307410_10059163
322 Ga0307406_10003016
323 Ga0307406_10048454
324 Ga0307406_10156624
325 Ga0307407_10002312
326 Ga0307407_10011085
327 Ga0307407_10041014
328 Ga0307407_10050822
329 Ga0307412_10002274
330 Ga0307412_10013735
331 Ga0307412_10245787
332 Ga0307409_100014252
333 Ga0307409_100060159
334 Ga0307409_100092613
335 Ga0307416_100005297
336 Ga0307414_10001151
337 Ga0307414_10002993
338 Ga0307414_10005777
339 Ga0307411_10003977
340 Ga0307411_10008253
341 Ga0307411_10025337
342 Ga0307415_100011467
343 Ga0307415_100048480
344 Ga0316583_10009356
345 Ga0316596_1021299
346 Ga0316574_0021411
347 Ga0316574_0032277
348 Ga0316574_0034513
349 Ga0316574_0035084
350 Ga0316574_0085429
351 Ga0316582_0019082
352 Ga0316582_0063046
353 Ga0316584_0029803
354 Ga0316584_0046721
355 Ga0316584_0201471
356 Ga0395900_0091816
357 Ga0395905_0066552
358 Ga0316581_0015048
359 Ga0436364_1220798
360 Ga0400487_46693
361 Ga0436365_1909070
362 Ga0436361_0519338
363 Ga0436361_0781815
364 Ga0436361_1213391
365 Ga0439465_0018279
366 Ga0450889_004701
367 Ga0466966_0046498
368 Ga0466959_0088293
369 Ga0495645_0111341
370 Ga0495668_0000711
371 Ga0501031_0064954
372 Ga0501032_0000970
373 Ga0501032_0033475
374 Ga0501033_0003808
375 Ga0501037_0007217
376 Ga0501038_0016154
377 Ga0501043_0106636
378 Ga0501046_0002277
379 Ga0501046_0008889
380 Ga0501048_0110230
381 Ga0501221_015776
382 Ga0501268_006566
383 Ga0501035_0019361
384 Ga0501035_0106879
385 Ga0501035_0144049
386 Ga0501035_0188342
387 Ga0501044_0037835
388 Ga0500616_0026145
389 Ga0590071_012814
390 Ga0501082_0383057

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02222

ATP-grasp

ATP-grasp domain

155

325

0.99

PF22660

RS_preATP-grasp-like

Ribonucleotide synthetase preATP-grasp domain

49

146

0.97

PF17769

PurK_C

Phosphoribosylaminoimidazole carboxylase C-terminal domain

351

408

0.95

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

148

345

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3aw8-assembly1.cif.gz_B crystal structure of n5-carboxyaminoimidazole ribonucleotide synthetase from thermus thermophilus hb8 0.9618 14 379
4e4t-assembly1.cif.gz_A crystal structure of phosphoribosylaminoimidazole carboxylase, atpase subunit from burkholderia ambifaria 0.9599 6 378
3qff-assembly1.cif.gz_B crystal structure of adp complex of purk: n5-carboxyaminoimidazole ribonucleotide synthetase 0.951 5 376
3orq-assembly1.cif.gz_A crystal structure of n5-carboxyaminoimidazole synthetase from staphylococcus aureus complexed with adp 0.9474 6 379
4e4t-assembly1.cif.gz_B crystal structure of phosphoribosylaminoimidazole carboxylase, atpase subunit from burkholderia ambifaria 0.9459 6 378
ID Description Score Start End Superfamily
af_Q54QE4_620_731_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9775 8 112 3.40.50.20
4izoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9678 6 117 3.40.50.20
4izoA03 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9661 190 378 3.30.470.20
3v4sB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.957 5 117 3.40.50.20
3aw8B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9548 14 105 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A7W1JDE0-F1-model_v4 5-(Carboxyamino)imidazole ribonucleotide synthase 0.9947 25 295 GO:0003824
GO:0005524
GO:0005829
GO:0006164
GO:0046872
AF-A0A359LNA8-F1-model_v4 5-(Carboxyamino)imidazole ribonucleotide synthase 0.9913 5 260 GO:0003824
GO:0005524
GO:0005829
GO:0006164
GO:0046872
AF-A0A423PKX3-F1-model_v4 N5-carboxyaminoimidazole ribonucleotide synthase (N5-CAIR synthase) (EC 6.3.4.18) (5-(carboxyamino)imidazole ribonucleotide synthetase) 0.9912 5 379 GO:0004638
GO:0005524
GO:0005829
GO:0006189
GO:0016614
GO:0034028
GO:0046872
AF-A0A7W1JDE0-F1-model_v4 5-(Carboxyamino)imidazole ribonucleotide synthase 0.9911 25 295 GO:0003824
GO:0005524
GO:0005829
GO:0006164
GO:0046872
AF-A0A1F2SDI4-F1-model_v4 N5-carboxyaminoimidazole ribonucleotide synthase (N5-CAIR synthase) (EC 6.3.4.18) (5-(carboxyamino)imidazole ribonucleotide synthetase) 0.9897 2 379 GO:0004638
GO:0005524
GO:0005829
GO:0006189
GO:0034028
GO:0046872

Map