F299914

General Info

Members Datasets Scaffolds Average Seq Length
195 132 195 307

Family's Representative Sequence

Representative Sequence 3300006175|Ga0070712_100047110|Ga0070712_1000471102
Length 334
Sequence MRVLLAGATGAIGRPLIRGLKQHGHSVFGLVRSVESTRVLIEMGAEAVIGDALDAASVRAAIARVRPDTVINELTSLPRHYTPAEMKAAAERDSRVRREGNVNLLAGMRESGVRRYVLQSSAFWYAPGPGLADESSPLAVDASPGVAAGARTYVELESTAFRASEIDCVAMRYGFFYGPGTWYTNAGDMGEQVRRQQVPIIGAGQGVASFVHIEDAASATVSALECAPGTYNIVDDHPSQQRVWLPAFARACGAPEPLQITEQEALATSGADSVYYATHLRGASNEKARHDLNFHPCPLEWLEARAVPAQRTRRIPTQTLDIDPANDPSSRAEK

Samples

Sample ID Description Type Environment
1 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
81 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
82 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
83 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
84 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
85 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
107 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
108 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
114 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300059491 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 12R_AW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
120 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
121 3300059506 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300059509 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 54R_CD_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300059630 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 165R_SD_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300059642 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 10R_AW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
127 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
128 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
129 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.26
Metatranscriptomes 9.74
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.69
Rhizosphere 92.31
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25405J52794_10010756 3300003911 Bacteria 1745
2 Ga0070683_100009040 3300005329 Bacteria 8502
3 Ga0070683_100053873 3300005329 Bacteria 3728
4 Ga0070683_100085427 3300005329 Bacteria 2958
5 Ga0068869_100186319 3300005334 Bacteria 1629
6 Ga0070680_100221717 3300005336 Bacteria 1596
7 Ga0068868_100206832 3300005338 Unclassified 1638
8 Ga0070673_100002164 3300005364 Bacteria 11898
9 Ga0070709_10100884 3300005434 Bacteria 1923
10 Ga0070714_100212078 3300005435 Bacteria 1775
11 Ga0070713_100008034 3300005436 Bacteria 7457
12 Ga0070710_10003625 3300005437 Bacteria 7305
13 Ga0070711_100015228 3300005439 Bacteria 4865
14 Ga0070708_100007501 3300005445 Bacteria 8736
15 Ga0070708_100083593 3300005445 Bacteria 2895
16 Ga0070708_100120666 3300005445 Bacteria 2418
17 Ga0070708_100198753 3300005445 Bacteria 1876
18 Ga0070708_100298478 3300005445 Bacteria 1517
19 Ga0070708_100380693 3300005445 Bacteria 1330
20 Ga0070681_10063230 3300005458 Unclassified 3673
21 Ga0070681_10086455 3300005458 Bacteria 3088
22 Ga0070706_100006710 3300005467 Bacteria 10867
23 Ga0070706_100073306 3300005467 Bacteria 3169
24 Ga0070707_100005117 3300005468 Bacteria 12294
25 Ga0070707_100006249 3300005468 Bacteria 11088
26 Ga0070707_100010233 3300005468 Bacteria 8736
27 Ga0070707_100056066 3300005468 Bacteria 3779
28 Ga0070707_100221747 3300005468 Bacteria 1841
29 Ga0070707_100354691 3300005468 Bacteria 1424
30 Ga0070707_100373508 3300005468 Bacteria 1385
31 Ga0070698_100057460 3300005471 Bacteria 3937
32 Ga0070698_100058524 3300005471 Bacteria 3896
33 Ga0070698_100118272 3300005471 Bacteria 2612
34 Ga0070698_100202102 3300005471 Bacteria 1922
35 Ga0070699_100004503 3300005518 Bacteria 12331
36 Ga0070699_100096352 3300005518 Bacteria 2591
37 Ga0070699_100243406 3300005518 Bacteria 1606
38 Ga0070699_100325675 3300005518 Bacteria 1381
39 Ga0070699_100428104 3300005518 Bacteria 1198
40 Ga0070679_100084822 3300005530 Bacteria 3155
41 Ga0070684_100518546 3300005535 Bacteria 1105
42 Ga0070697_100011948 3300005536 Bacteria 6796
43 Ga0070695_100144962 3300005545 Bacteria 1651
44 Ga0070696_100010409 3300005546 Bacteria 6232
45 Ga0070693_100065950 3300005547 Bacteria 2117
46 Ga0068855_100005165 3300005563 Bacteria 15921
47 Ga0068855_100270453 3300005563 Bacteria 1890
48 Ga0068855_100557470 3300005563 Bacteria 1240
49 Ga0068857_100207596 3300005577 Bacteria 1787
50 Ga0068852_100186994 3300005616 Bacteria 1951
51 Ga0068863_100606147 3300005841 Unclassified 1084
52 Ga0081455_10007838 3300005937 Bacteria 11181
53 Ga0081455_10022765 3300005937 Bacteria 5846
54 Ga0081455_10046973 3300005937 Bacteria 3742
55 Ga0081455_10164713 3300005937 Bacteria 1695
56 Ga0081538_10000190 3300005981 Bacteria 67602
57 Ga0081538_10034821 3300005981 Bacteria 3321
58 Ga0081540_1037662 3300005983 Unclassified 2559
59 Ga0070717_10034434 3300006028 Bacteria 4094
60 Ga0070717_10217174 3300006028 Bacteria 1679
61 Ga0070717_10330121 3300006028 Bacteria 1360
62 Ga0070716_100221888 3300006173 Bacteria 1270
63 Ga0070712_100047110 3300006175 Bacteria 2982
64 Ga0070712_100108457 3300006175 Bacteria 2067
65 Ga0070712_100116138 3300006175 Bacteria 2007
66 Ga0068871_100236480 3300006358 Bacteria 1587
67 Ga0075428_100034979 3300006844 Bacteria 5538
68 Ga0075433_10094245 3300006852 Bacteria 2650
69 Ga0075434_100034990 3300006871 Plasmid 4964
70 Ga0075434_100036624 3300006871 Bacteria 4853
71 Ga0075434_100136888 3300006871 Bacteria 2468
72 Ga0099794_10205578 3300007265 Bacteria 1009
73 Ga0105240_10055655 3300009093 Bacteria 4952
74 Ga0111539_10107978 3300009094 Bacteria 3266
75 Ga0105245_10029891 3300009098 Bacteria 4817
76 Ga0105245_10127437 3300009098 Bacteria 2384
77 Ga0114129_10286934 3300009147 Bacteria 2197
78 Ga0114129_10414731 3300009147 Bacteria 1772
79 Ga0105241_10002471 3300009174 Bacteria 13899
80 Ga0105241_10247791 3300009174 Bacteria 1509
81 Ga0105248_10261373 3300009177 Unclassified 1949
82 Ga0105248_10274175 3300009177 Bacteria 1899
83 Ga0105238_10163251 3300009551 Bacteria 2204
84 Ga0105239_10059548 3300010375 Plasmid 4191
85 Ga0105246_10198939 3300011119 Bacteria 1556
86 Ga0157373_10005068 3300013100 Bacteria 9900
87 Ga0157369_10224518 3300013105 Bacteria 1965
88 Ga0157369_10257327 3300013105 Bacteria 1821
89 Ga0157378_10108022 3300013297 Bacteria 2547
90 Ga0157379_10351878 3300014968 Bacteria 1349
91 Ga0157376_10532353 3300014969 Unclassified 1160
92 Ga0224712_10046257 3300022467 Bacteria 1669
93 Ga0207692_10004196 3300025898 Bacteria 5690
94 Ga0207685_10135575 3300025905 Bacteria 1098
95 Ga0207684_10001762 3300025910 Bacteria 22872
96 Ga0207684_10048264 3300025910 Bacteria 3611
97 Ga0207684_10053878 3300025910 Bacteria 3413
98 Ga0207684_10107090 3300025910 Bacteria 2391
99 Ga0207684_10130531 3300025910 Bacteria 2156
100 Ga0207654_10003336 3300025911 Bacteria 8131
101 Ga0207654_10021980 3300025911 Bacteria 3398
102 Ga0207707_10052489 3300025912 Unclassified 3549
103 Ga0207707_10091569 3300025912 Bacteria 2657
104 Ga0207695_10003951 3300025913 Bacteria 20498
105 Ga0207671_10258959 3300025914 Bacteria 1369
106 Ga0207693_10017755 3300025915 Bacteria 5673
107 Ga0207693_10023813 3300025915 Bacteria 4860
108 Ga0207663_10004430 3300025916 Bacteria 6979
109 Ga0207660_10076326 3300025917 Unclassified 2450
110 Ga0207652_10461897 3300025921 Bacteria 1144
111 Ga0207646_10002278 3300025922 Bacteria 22845
112 Ga0207646_10004683 3300025922 Bacteria 14739
113 Ga0207646_10059855 3300025922 Bacteria 3401
114 Ga0207646_10095753 3300025922 Bacteria 2659
115 Ga0207687_10013010 3300025927 Bacteria 5437
116 Ga0207700_10286248 3300025928 Bacteria 1419
117 Ga0207664_10069809 3300025929 Bacteria 2825
118 Ga0207665_10141662 3300025939 Unclassified 1715
119 Ga0207665_10171320 3300025939 Bacteria 1568
120 Ga0207665_10271949 3300025939 Bacteria 1258
121 Ga0207665_10369646 3300025939 Bacteria 1086
122 Ga0207711_10170435 3300025941 Bacteria 1975
123 Ga0207667_10046796 3300025949 Bacteria 4582
124 Ga0207678_10019068 3300026067 Bacteria 6023
125 Ga0207702_10171098 3300026078 Bacteria 1992
126 Ga0207641_10181794 3300026088 Bacteria 1927
127 Ga0207676_10075552 3300026095 Bacteria 2719
128 Ga0207674_10233564 3300026116 Bacteria 1787
129 Ga0207428_10105142 3300027907 Bacteria 2177
130 Ga0307409_100379050 3300031995 Bacteria 1344
131 Ga0307411_10212401 3300032005 Bacteria 1495
132 Ga0373934_0042085 3300035086 Bacteria 1804
133 Ga0373944_0080108 3300035089 Bacteria 1077
134 Ga0373951_0004028 3300035091 Bacteria 3518
135 Ga0373956_0113913 3300035119 Bacteria 1260
136 Ga0373943_0082889 3300035170 Bacteria 1647
137 Ga0373935_0131174 3300035692 Bacteria 1684
138 Ga0373937_0018102 3300036401 Bacteria 6285
139 Ga0373937_0087734 3300036401 Bacteria 2880
140 Ga0436361_0187328 3300039447 Unclassified 1258
141 Ga0436361_0315219 3300039447 Bacteria 1064
142 Ga0466961_0021520 3300044693 Bacteria 4150
143 Ga0466963_0084708 3300044694 Bacteria 2151
144 Ga0466958_0096693 3300045836 Bacteria 1832
145 Ga0466958_0205519 3300045836 Bacteria 1254
146 Ga0466967_0648988 3300045976 Unclassified 1043
147 Ga0495582_0000012 3300046473 Bacteria 112893
148 Ga0495630_0031272 3300046517 Bacteria 3963
149 Ga0495652_0000086 3300046529 Bacteria 99373
150 Ga0495587_0032668 3300046536 Bacteria 3145
151 Ga0495645_0020942 3300046543 Bacteria 4725
152 Ga0495658_0000008 3300046683 Bacteria 115426
153 Ga0496102_0043753 3300048905 Bacteria 4062
154 Ga0496102_0291276 3300048905 Bacteria 1539
155 Ga0496107_0020032 3300048910 Bacteria 4725
156 Ga0496108_0372187 3300048911 Bacteria 1247
157 Ga0496109_0089470 3300048912 Bacteria 2846
158 Ga0496109_0194533 3300048912 Bacteria 1906
159 Ga0496110_0006665 3300048913 Bacteria 9175
160 Ga0496111_0044005 3300048914 Bacteria 3209
161 Ga0496111_0315303 3300048914 Bacteria 1158
162 Ga0496112_0076502 3300048915 Bacteria 3310
163 Ga0496112_0534130 3300048915 Bacteria 1107
164 Ga0496113_0019642 3300048916 Bacteria 4731
165 Ga0496113_0123498 3300048916 Bacteria 2026
166 Ga0496113_0159617 3300048916 Bacteria 1782
167 Ga0496113_0218742 3300048916 Bacteria 1518
168 Ga0501079_0011342 3300049741 Bacteria 6799
169 nmdc:mga05p37_233451_c1 3300050507 Bacteria 2215
170 nmdc:mga09592_58622_c1 3300050508 Bacteria 3256
171 nmdc:mga08y16_528571_c1 3300050511 Bacteria 1196
172 nmdc:mga0n895_421605_c1 3300050512 Bacteria 1349
173 nmdc:mga0a205_193404_c1 3300050515 Bacteria 1926
174 Ga0495601_0088173 3300053077 Bacteria 1995
175 Ga0495601_0296564 3300053077 Unclassified 1053
176 Ga0495619_0007965 3300053085 Bacteria 6706
177 Ga0587084_001096 3300059477 Bacteria 2462
178 Ga0587066_000421 3300059490 Bacteria 3367
179 Ga0587070_001111 3300059491 Bacteria 2658
180 Ga0587073_0000771 3300059492 Bacteria 3256
181 Ga0587077_003992 3300059493 Bacteria 1904
182 Ga0587082_001982 3300059504 Bacteria 2242
183 Ga0587083_0000532 3300059505 Bacteria 3478
184 Ga0587085_008248 3300059506 Bacteria 1323
185 Ga0587089_001880 3300059509 Bacteria 2043
186 Ga0587090_001034 3300059510 Bacteria 2667
187 Ga0587128_011125 3300059630 Unclassified 1223
188 Ga0587067_000607 3300059640 Bacteria 3285
189 Ga0587069_000701 3300059642 Bacteria 2706
190 Ga0587072_010455 3300059643 Bacteria 1500
191 Ga0587075_007258 3300059644 Bacteria 1386
192 Ga0587079_002362 3300059647 Bacteria 2294
193 Ga0587107_003219 3300059652 Bacteria 1563
194 Ga0587111_0002328 3300060346 Bacteria 2512
195 Ga0530510_0012116 3300061734 Bacteria 6051

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048916 Ga0496113_0159617 Ga0496113_0159617_812_1705 240
2 3300045836 Ga0466958_0096693 Ga0466958_0096693_950_1783 252
3 3300007265 Ga0099794_10205578 Ga0099794_102055782 263
4 3300036401 Ga0373937_0087734 Ga0373937_0087734_1132_1947 263
5 3300039447 Ga0436361_0187328 Ga0436361_0187328_405_1229 263
6 3300053085 Ga0495619_0007965 Ga0495619_0007965_1375_2316 263
7 3300045976 Ga0466967_0648988 Ga0466967_0648988_67_897 268
8 3300045836 Ga0466958_0205519 Ga0466958_0205519_270_1112 272
9 3300048916 Ga0496113_0123498 Ga0496113_0123498_974_1879 276
10 3300013105 Ga0157369_10224518 Ga0157369_102245182 280
11 3300046473 Ga0495582_0000012 Ga0495582_0000012_25394_26335 280
12 3300046683 Ga0495658_0000008 Ga0495658_0000008_109163_110104 280
13 3300046517 Ga0495630_0031272 Ga0495630_0031272_1899_2807 281
14 3300049741 Ga0501079_0011342 Ga0501079_0011342_3248_4192 282
15 3300061734 Ga0530510_0012116 Ga0530510_0012116_2986_3930 282
16 3300005983 Ga0081540_1037662 Ga0081540_10376623 285
17 3300059640 Ga0587067_000607 Ga0587067_000607_1457_2389 285
18 3300050515 nmdc:mga0a205_193404_c1 nmdc:mga0a205_193404_c1_467_1360 286
19 3300046536 Ga0495587_0032668 Ga0495587_0032668_1788_2729 287
20 3300005334 Ga0068869_100186319 Ga0068869_1001863192 289
21 3300031995 Ga0307409_100379050 Ga0307409_1003790502 289
22 3300032005 Ga0307411_10212401 Ga0307411_102124011 289
23 3300006175 Ga0070712_100108457 Ga0070712_1001084573 292
24 3300025915 Ga0207693_10023813 Ga0207693_100238132 292
25 3300005563 Ga0068855_100557470 Ga0068855_1005574702 293
26 3300035086 Ga0373934_0042085 Ga0373934_0042085_584_1492 293
27 3300035119 Ga0373956_0113913 Ga0373956_0113913_254_1162 293
28 3300036401 Ga0373937_0018102 Ga0373937_0018102_948_1856 293
29 3300039447 Ga0436361_0315219 Ga0436361_0315219_88_993 293
30 3300048905 Ga0496102_0291276 Ga0496102_0291276_300_1214 293
31 3300048910 Ga0496107_0020032 Ga0496107_0020032_603_1517 293
32 3300048912 Ga0496109_0089470 Ga0496109_0089470_516_1430 293
33 3300048913 Ga0496110_0006665 Ga0496110_0006665_1436_2350 293
34 3300048914 Ga0496111_0044005 Ga0496111_0044005_630_1544 293
35 3300005445 Ga0070708_100380693 Ga0070708_1003806932 294
36 3300005468 Ga0070707_100373508 Ga0070707_1003735081 294
37 3300005518 Ga0070699_100096352 Ga0070699_1000963522 294
38 3300025910 Ga0207684_10053878 Ga0207684_100538782 294
39 3300035089 Ga0373944_0080108 Ga0373944_0080108_25_1005 294
40 3300035170 Ga0373943_0082889 Ga0373943_0082889_566_1546 294
41 3300005435 Ga0070714_100212078 Ga0070714_1002120783 295
42 3300006028 Ga0070717_10330121 Ga0070717_103301212 295
43 3300009094 Ga0111539_10107978 Ga0111539_101079782 295
44 3300009174 Ga0105241_10002471 Ga0105241_1000247110 295
45 3300025911 Ga0207654_10021980 Ga0207654_100219802 295
46 3300027907 Ga0207428_10105142 Ga0207428_101051423 295
47 3300035091 Ga0373951_0004028 Ga0373951_0004028_1875_2786 295
48 3300050511 nmdc:mga08y16_528571_c1 nmdc:mga08y16_528571_c1_235_1143 295
49 3300005336 Ga0070680_100221717 Ga0070680_1002217172 296
50 3300005563 Ga0068855_100270453 Ga0068855_1002704532 296
51 3300005329 Ga0070683_100085427 Ga0070683_1000854272 297
52 3300005445 Ga0070708_100298478 Ga0070708_1002984782 297
53 3300005467 Ga0070706_100073306 Ga0070706_1000733062 297
54 3300005468 Ga0070707_100005117 Ga0070707_1000051173 297
55 3300005468 Ga0070707_100056066 Ga0070707_1000560663 297
56 3300005471 Ga0070698_100118272 Ga0070698_1001182721 297
57 3300005937 Ga0081455_10046973 Ga0081455_100469732 297
58 3300009093 Ga0105240_10055655 Ga0105240_100556553 297
59 3300025910 Ga0207684_10130531 Ga0207684_101305312 297
60 3300025922 Ga0207646_10004683 Ga0207646_1000468313 297
61 3300025922 Ga0207646_10095753 Ga0207646_100957531 297
62 3300025927 Ga0207687_10013010 Ga0207687_100130103 297
63 3300044693 Ga0466961_0021520 Ga0466961_0021520_1273_2241 297
64 3300044694 Ga0466963_0084708 Ga0466963_0084708_558_1475 297
65 3300046529 Ga0495652_0000086 Ga0495652_0000086_58461_59387 297
66 3300048916 Ga0496113_0019642 Ga0496113_0019642_1711_2649 297
67 3300053077 Ga0495601_0088173 Ga0495601_0088173_251_1177 297
68 3300005445 Ga0070708_100083593 Ga0070708_1000835932 298
69 3300005468 Ga0070707_100006249 Ga0070707_10000624913 298
70 3300005471 Ga0070698_100202102 Ga0070698_1002021022 298
71 3300005518 Ga0070699_100243406 Ga0070699_1002434061 298
72 3300005563 Ga0068855_100005165 Ga0068855_10000516511 298
73 3300006175 Ga0070712_100116138 Ga0070712_1001161381 298
74 3300025913 Ga0207695_10003951 Ga0207695_1000395118 298
75 3300025922 Ga0207646_10059855 Ga0207646_100598552 298
76 3300025949 Ga0207667_10046796 Ga0207667_100467964 298
77 3300005329 Ga0070683_100009040 Ga0070683_1000090406 300
78 3300005364 Ga0070673_100002164 Ga0070673_10000216413 300
79 3300005436 Ga0070713_100008034 Ga0070713_1000080344 300
80 3300005445 Ga0070708_100198753 Ga0070708_1001987531 300
81 3300005981 Ga0081538_10000190 Ga0081538_1000019047 300
82 3300005981 Ga0081538_10034821 Ga0081538_100348211 300
83 3300006844 Ga0075428_100034979 Ga0075428_1000349796 300
84 3300009147 Ga0114129_10286934 Ga0114129_102869342 300
85 3300022467 Ga0224712_10046257 Ga0224712_100462572 300
86 3300025910 Ga0207684_10107090 Ga0207684_101070903 300
87 3300035692 Ga0373935_0131174 Ga0373935_0131174_58_1026 300
88 3300046543 Ga0495645_0020942 Ga0495645_0020942_2227_3195 300
89 3300050507 nmdc:mga05p37_233451_c1 nmdc:mga05p37_233451_c1_697_1635 300
90 3300050508 nmdc:mga09592_58622_c1 nmdc:mga09592_58622_c1_700_1638 300
91 3300053077 Ga0495601_0296564 Ga0495601_0296564_65_1033 300
92 3300003911 JGI25405J52794_10010756 JGI25405J52794_100107562 301
93 3300005329 Ga0070683_100053873 Ga0070683_1000538733 301
94 3300005338 Ga0068868_100206832 Ga0068868_1002068322 301
95 3300005434 Ga0070709_10100884 Ga0070709_101008843 301
96 3300005437 Ga0070710_10003625 Ga0070710_100036259 301
97 3300005439 Ga0070711_100015228 Ga0070711_1000152283 301
98 3300005445 Ga0070708_100007501 Ga0070708_1000075014 301
99 3300005445 Ga0070708_100120666 Ga0070708_1001206663 301
100 3300005458 Ga0070681_10063230 Ga0070681_100632305 301
101 3300005458 Ga0070681_10086455 Ga0070681_100864555 301
102 3300005467 Ga0070706_100006710 Ga0070706_1000067104 301
103 3300005468 Ga0070707_100010233 Ga0070707_1000102334 301
104 3300005468 Ga0070707_100221747 Ga0070707_1002217472 301
105 3300005468 Ga0070707_100354691 Ga0070707_1003546911 301
106 3300005471 Ga0070698_100057460 Ga0070698_1000574603 301
107 3300005471 Ga0070698_100058524 Ga0070698_1000585243 301
108 3300005518 Ga0070699_100004503 Ga0070699_10000450311 301
109 3300005518 Ga0070699_100325675 Ga0070699_1003256751 301
110 3300005518 Ga0070699_100428104 Ga0070699_1004281042 301
111 3300005530 Ga0070679_100084822 Ga0070679_1000848224 301
112 3300005535 Ga0070684_100518546 Ga0070684_1005185461 301
113 3300005536 Ga0070697_100011948 Ga0070697_1000119485 301
114 3300005545 Ga0070695_100144962 Ga0070695_1001449623 301
115 3300005546 Ga0070696_100010409 Ga0070696_1000104091 301
116 3300005547 Ga0070693_100065950 Ga0070693_1000659502 301
117 3300005577 Ga0068857_100207596 Ga0068857_1002075963 301
118 3300005616 Ga0068852_100186994 Ga0068852_1001869942 301
119 3300005841 Ga0068863_100606147 Ga0068863_1006061471 301
120 3300005937 Ga0081455_10007838 Ga0081455_100078387 301
121 3300005937 Ga0081455_10022765 Ga0081455_100227656 301
122 3300005937 Ga0081455_10164713 Ga0081455_101647132 301
123 3300006028 Ga0070717_10034434 Ga0070717_100344343 301
124 3300006028 Ga0070717_10217174 Ga0070717_102171742 301
125 3300006173 Ga0070716_100221888 Ga0070716_1002218882 301
126 3300006175 Ga0070712_100047110 Ga0070712_1000471102 301
127 3300006358 Ga0068871_100236480 Ga0068871_1002364802 301
128 3300006852 Ga0075433_10094245 Ga0075433_100942452 301
129 3300006871 Ga0075434_100034990 Ga0075434_1000349905 301
130 3300006871 Ga0075434_100036624 Ga0075434_1000366242 301
131 3300006871 Ga0075434_100136888 Ga0075434_1001368881 301
132 3300009098 Ga0105245_10029891 Ga0105245_100298914 301
133 3300009098 Ga0105245_10127437 Ga0105245_101274371 301
134 3300009147 Ga0114129_10414731 Ga0114129_104147312 301
135 3300009174 Ga0105241_10247791 Ga0105241_102477912 301
136 3300009177 Ga0105248_10261373 Ga0105248_102613733 301
137 3300009177 Ga0105248_10274175 Ga0105248_102741752 301
138 3300009551 Ga0105238_10163251 Ga0105238_101632512 301
139 3300010375 Ga0105239_10059548 Ga0105239_100595483 301
140 3300011119 Ga0105246_10198939 Ga0105246_101989392 301
141 3300013100 Ga0157373_10005068 Ga0157373_100050686 301
142 3300013105 Ga0157369_10257327 Ga0157369_102573272 301
143 3300013297 Ga0157378_10108022 Ga0157378_101080223 301
144 3300014968 Ga0157379_10351878 Ga0157379_103518782 301
145 3300014969 Ga0157376_10532353 Ga0157376_105323532 301
146 3300025898 Ga0207692_10004196 Ga0207692_100041965 301
147 3300025905 Ga0207685_10135575 Ga0207685_101355751 301
148 3300025910 Ga0207684_10001762 Ga0207684_1000176223 301
149 3300025910 Ga0207684_10048264 Ga0207684_100482643 301
150 3300025911 Ga0207654_10003336 Ga0207654_100033364 301
151 3300025912 Ga0207707_10052489 Ga0207707_100524895 301
152 3300025912 Ga0207707_10091569 Ga0207707_100915694 301
153 3300025914 Ga0207671_10258959 Ga0207671_102589592 301
154 3300025915 Ga0207693_10017755 Ga0207693_100177555 301
155 3300025916 Ga0207663_10004430 Ga0207663_100044306 301
156 3300025917 Ga0207660_10076326 Ga0207660_100763264 301
157 3300025921 Ga0207652_10461897 Ga0207652_104618971 301
158 3300025922 Ga0207646_10002278 Ga0207646_100022785 301
159 3300025928 Ga0207700_10286248 Ga0207700_102862481 301
160 3300025929 Ga0207664_10069809 Ga0207664_100698094 301
161 3300025939 Ga0207665_10141662 Ga0207665_101416622 301
162 3300025939 Ga0207665_10171320 Ga0207665_101713202 301
163 3300025939 Ga0207665_10271949 Ga0207665_102719492 301
164 3300025939 Ga0207665_10369646 Ga0207665_103696461 301
165 3300025941 Ga0207711_10170435 Ga0207711_101704353 301
166 3300026067 Ga0207678_10019068 Ga0207678_100190686 301
167 3300026078 Ga0207702_10171098 Ga0207702_101710983 301
168 3300026088 Ga0207641_10181794 Ga0207641_101817942 301
169 3300026095 Ga0207676_10075552 Ga0207676_100755522 301
170 3300026116 Ga0207674_10233564 Ga0207674_102335641 301
171 3300048905 Ga0496102_0043753 Ga0496102_0043753_2361_3299 301
172 3300048911 Ga0496108_0372187 Ga0496108_0372187_95_1021 301
173 3300048912 Ga0496109_0194533 Ga0496109_0194533_430_1356 301
174 3300048914 Ga0496111_0315303 Ga0496111_0315303_95_1021 301
175 3300048915 Ga0496112_0076502 Ga0496112_0076502_1528_2463 301
176 3300048915 Ga0496112_0534130 Ga0496112_0534130_148_1074 301
177 3300048916 Ga0496113_0218742 Ga0496113_0218742_127_1062 301
178 3300050512 nmdc:mga0n895_421605_c1 nmdc:mga0n895_421605_c1_326_1252 301
179 3300059477 Ga0587084_001096 Ga0587084_001096_201_1136 301
180 3300059490 Ga0587066_000421 Ga0587066_000421_1087_2019 301
181 3300059491 Ga0587070_001111 Ga0587070_001111_520_1452 301
182 3300059492 Ga0587073_0000771 Ga0587073_0000771_1107_2039 301
183 3300059493 Ga0587077_003992 Ga0587077_003992_520_1452 301
184 3300059504 Ga0587082_001982 Ga0587082_001982_649_1581 301
185 3300059505 Ga0587083_0000532 Ga0587083_0000532_1186_2118 301
186 3300059506 Ga0587085_008248 Ga0587085_008248_308_1240 301
187 3300059509 Ga0587089_001880 Ga0587089_001880_181_1113 301
188 3300059510 Ga0587090_001034 Ga0587090_001034_280_1212 301
189 3300059630 Ga0587128_011125 Ga0587128_011125_223_1158 301
190 3300059642 Ga0587069_000701 Ga0587069_000701_356_1288 301
191 3300059643 Ga0587072_010455 Ga0587072_010455_223_1155 301
192 3300059644 Ga0587075_007258 Ga0587075_007258_173_1102 301
193 3300059647 Ga0587079_002362 Ga0587079_002362_520_1452 301
194 3300059652 Ga0587107_003219 Ga0587107_003219_520_1452 301
195 3300060346 Ga0587111_0002328 Ga0587111_0002328_1434_2366 301

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05368

NmrA

NmrA-like family

3

120

0.9

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

3

233

0.82

PF13460

NAD_binding_10

NAD(P)H-binding

7

211

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ic5-assembly2.cif.gz_B n-terminal domain of putative saccharopine dehydrogenase from ruegeria pomeroyi. 0.8244 2 116
1lnq-assembly1.cif.gz_A crystal structure of mthk at 3.3 a 0.8021 2 119
3rbz-assembly1.cif.gz_A-2 mthk channel, ca2+-bound 0.7974 2 121
3rbz-assembly1.cif.gz_D-2 mthk channel, ca2+-bound 0.7972 2 121
6s2j-assembly1.cif.gz_A square conformation of ktra r16k mutant ring with bound atp 0.7966 2 120
ID Description Score Start End Superfamily
af_Q2FVH5_1_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8816 2 299 3.40.50.720
af_Q2FVH5_1_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.864 2 299 3.40.50.720
af_A0A1D6GVM8_196_300_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8169 1 111 3.40.50.20
af_I1KVW6_141_273_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8167 1 111 3.40.50.20
af_I1KG15_128_276_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8152 1 111 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7V8NWL5-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9949 118 294 GO:0004029
GO:0005737
AF-A0A7W8IUV6-F1-model_v4 deleted 0.9749 1 294
AF-A0A2V6IK91-F1-model_v4 dTDP-4-dehydrorhamnose reductase 0.9669 36 295 GO:0004029
GO:0005737
AF-A0A7V9ZKZ0-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9638 83 295
AF-A0A506UR93-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9619 1 295 GO:0004029
GO:0005737

Feature Viewer

pLDDT pTM Quality
93.2 0.91 High
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Predicted Structure (AlphaFold2)

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